View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11851_low_58 (Length: 282)
Name: NF11851_low_58
Description: NF11851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11851_low_58 |
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Alignment Details
Target: chr4 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 7 - 271
Target Start/End: Original strand, 46865047 - 46865312
Alignment:
| Q |
7 |
gttacttgactgaaattttaatagtttggagtaatcttctgttaagcattggttctcttcgtaacctttcaggggccgtactccatactcataccaaata |
106 |
Q |
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| T |
46865047 |
gttacttgactgaaattttaatagtttggagtaatcttctgttaagcatgggttctcttcgtaacctttcaggggccgtactccatactcgtaccaaata |
46865146 |
T |
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| Q |
107 |
ttcgttagg-cctcgtggttacacaagtaggtactaaaattgcttttcagatatnnnnnnnngttggatagtactctactttggtatgtgtcgatggata |
205 |
Q |
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| T |
46865147 |
ttcgttaggtcctcgtggttacacaagtaggtaccaaaattgcttttcagatataaaaaaaagttggatagtactctactttggtatgtgtcgatggata |
46865246 |
T |
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| Q |
206 |
ctctacttttcatatatggttaacgcagctgcagtgttagagactaaaaaaccttaacgtctctgc |
271 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46865247 |
ctctacttttcatatatggttaacgcagctgcagtgttagagactaaaaaaccttaacgtctctgc |
46865312 |
T |
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