View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11851_low_65 (Length: 267)
Name: NF11851_low_65
Description: NF11851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11851_low_65 |
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Alignment Details
Target: chr2 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 2937409 - 2937160
Alignment:
| Q |
1 |
tgccacaaaagagaacaaagtgattgaagatatatagaaattgacaagtcatgttggggaaatataaatgaacctaaactaagagttaggaataagtgcg |
100 |
Q |
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||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
2937409 |
tgccacaaaggagaacaaagtgcttgaagatatatagaaattgacaagtcatgttggggaaatataaatgaacctaaaccaagagttaggaataagtgcg |
2937310 |
T |
|
| Q |
101 |
gttgtattgtttctcaccgagttacacatacagtgtatagttgtgggtctaggtgctaatgcagggaatgttggggaacaagttcaggaaacacggtagt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2937309 |
gttgtattgtttctcaccgagttacacatacagtgtatagttgtgggtctaggtgctaatgcagggaatgttggggaacaagttcaggaaacacggtagt |
2937210 |
T |
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| Q |
201 |
tgctagctgtttactagactactatgctttggggaggtgcaactgattca |
250 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
2937209 |
tgctagctgtttactagactactatactttggggaggtgcaactgattca |
2937160 |
T |
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