View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11853_low_27 (Length: 403)
Name: NF11853_low_27
Description: NF11853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11853_low_27 |
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Alignment Details
Target: chr7 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 39092389 - 39092102
Alignment:
| Q |
1 |
agcgggttcggattgagtttgaaaataagagaccaatctataaaacccttccatggttccgttttgaatgccttcaaaaaagagttgtttgccatgagaa |
100 |
Q |
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| T |
39092389 |
agcgggttcggattgagtttgaaaataagagaccaatctataaaaaccttccatagttccgttttgaatgccttcaaaaaagagttgtttgccatgagaa |
39092290 |
T |
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| Q |
101 |
gaagcgaaatcaacggaagggggtgaaggaagaagccttctatacaaaccagccatcgccgccattctattctgatgattcactcgcttttcgaattgta |
200 |
Q |
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| T |
39092289 |
gaagcgaaatcaacggaagggggtgaaggaagaagccttctatacaaaccagccatcgccgccattctgttctgatgattcactcgcttttcgaattgta |
39092190 |
T |
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| Q |
201 |
accgaaattacaactaacacaaaaaccctcttataaaactcccctaatgatggctaatgaagattactcgcactttttttgggtcaaac |
289 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |
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| T |
39092189 |
accgaaattacaactaacacaaaaaccctcttataaaactcccctaatgatggctaatgaaga-tactcgcactttttctgggtcaaac |
39092102 |
T |
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