View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11854_high_47 (Length: 333)

Name: NF11854_high_47
Description: NF11854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11854_high_47
NF11854_high_47
[»] chr4 (67 HSPs)
chr4 (153-331)||(28465451-28465629)
chr4 (153-331)||(34789380-34789558)
chr4 (149-327)||(21034229-21034408)
chr4 (155-331)||(14440198-14440374)
chr4 (155-330)||(56077695-56077870)
chr4 (158-331)||(41114160-41114335)
chr4 (155-329)||(12593024-12593198)
chr4 (157-331)||(54440939-54441113)
chr4 (155-331)||(46737025-46737201)
chr4 (155-331)||(26974283-26974460)
chr4 (157-331)||(28465083-28465257)
chr4 (158-331)||(45838917-45839092)
chr4 (158-331)||(14439831-14440004)
chr4 (157-331)||(34789752-34789927)
chr4 (158-331)||(28166007-28166180)
chr4 (155-328)||(33689829-33690001)
chr4 (155-331)||(55677327-55677504)
chr4 (155-331)||(36168701-36168877)
chr4 (155-329)||(46736655-46736829)
chr4 (155-331)||(12593393-12593569)
chr4 (157-331)||(54440573-54440745)
chr4 (158-331)||(6616675-6616849)
chr4 (155-331)||(21034606-21034783)
chr4 (155-331)||(34807116-34807293)
chr4 (158-331)||(34807509-34807682)
chr4 (155-331)||(45838547-45838723)
chr4 (149-318)||(19528863-19529033)
chr4 (158-331)||(35643558-35643743)
chr4 (157-331)||(24851835-24852010)
chr4 (158-293)||(33777635-33777770)
chr4 (155-331)||(19529063-19529240)
chr4 (158-331)||(41608377-41608551)
chr4 (158-331)||(16214865-16215038)
chr4 (158-329)||(36168332-36168506)
chr4 (157-293)||(33778020-33778156)
chr4 (155-246)||(24851316-24851407)
chr4 (158-331)||(229529-229702)
chr4 (169-331)||(35193322-35193483)
chr4 (180-331)||(17504329-17504480)
chr4 (146-246)||(41608870-41608971)
chr4 (145-289)||(6617074-6617217)
chr4 (157-243)||(1397597-1397683)
chr4 (158-331)||(229164-229337)
chr4 (158-283)||(26974662-26974788)
chr4 (155-331)||(17503974-17504149)
chr4 (249-329)||(24851559-24851639)
chr4 (155-331)||(40160094-40160269)
chr4 (156-266)||(23986521-23986632)
chr4 (155-302)||(35193702-35193848)
chr4 (153-295)||(40160497-40160638)
chr4 (156-321)||(18965141-18965306)
chr4 (153-262)||(30597958-30598067)
chr4 (189-324)||(18965513-18965648)
chr4 (155-314)||(24335761-24335920)
chr4 (150-228)||(44219370-44219448)
chr4 (157-304)||(24336160-24336307)
chr4 (155-269)||(51309936-51310051)
chr4 (158-235)||(10795777-10795854)
chr4 (245-289)||(35643970-35644014)
chr4 (157-221)||(35644042-35644106)
chr4 (154-315)||(25447246-25447408)
chr4 (157-229)||(51641302-51641374)
chr4 (155-230)||(12930804-12930879)
chr4 (154-315)||(46193404-46193566)
chr4 (155-314)||(15523235-15523395)
chr4 (152-208)||(16691563-16691619)
chr4 (156-208)||(20958351-20958403)
[»] chr3 (75 HSPs)
chr3 (158-331)||(49951549-49951722)
chr3 (155-331)||(41998229-41998406)
chr3 (153-331)||(43678293-43678471)
chr3 (158-331)||(51473225-51473399)
chr3 (149-331)||(55389599-55389781)
chr3 (158-331)||(44676842-44677015)
chr3 (146-331)||(32730759-32730944)
chr3 (154-331)||(50662782-50662959)
chr3 (155-323)||(38535309-38535477)
chr3 (153-331)||(51828910-51829088)
chr3 (155-331)||(47431696-47431873)
chr3 (155-331)||(330206-330382)
chr3 (152-331)||(51828327-51828507)
chr3 (155-332)||(2051295-2051476)
chr3 (155-322)||(16701168-16701338)
chr3 (156-331)||(46013792-46013968)
chr3 (155-331)||(51827957-51828133)
chr3 (155-331)||(52375701-52375877)
chr3 (153-331)||(40275464-40275641)
chr3 (155-331)||(34104638-34104813)
chr3 (155-331)||(55389967-55390143)
chr3 (149-328)||(40838646-40838825)
chr3 (155-289)||(49720773-49720907)
chr3 (153-331)||(49951916-49952094)
chr3 (153-331)||(40839022-40839200)
chr3 (155-325)||(14654199-14654361)
chr3 (155-331)||(25534890-25535067)
chr3 (153-293)||(329844-329984)
chr3 (155-331)||(46013422-46013598)
chr3 (157-329)||(52237189-52237361)
chr3 (155-329)||(2044271-2044445)
chr3 (157-331)||(52236818-52236992)
chr3 (154-331)||(40275092-40275271)
chr3 (155-331)||(49720371-49720547)
chr3 (157-331)||(30513724-30513898)
chr3 (155-329)||(51472855-51473029)
chr3 (155-331)||(51828539-51828716)
chr3 (158-316)||(22370599-22370758)
chr3 (155-329)||(38535667-38535841)
chr3 (154-328)||(43678657-43678831)
chr3 (153-331)||(52375325-52375503)
chr3 (155-331)||(14654561-14654735)
chr3 (158-331)||(32730392-32730565)
chr3 (153-319)||(44676470-44676636)
chr3 (161-331)||(34105018-34105190)
chr3 (149-289)||(16689352-16689492)
chr3 (155-331)||(39010075-39010250)
chr3 (153-331)||(43222388-43222566)
chr3 (155-331)||(49407796-49407971)
chr3 (157-304)||(36701493-36701640)
chr3 (155-287)||(41998643-41998774)
chr3 (155-304)||(50900925-50901073)
chr3 (155-304)||(27200089-27200237)
chr3 (153-331)||(55192116-55192293)
chr3 (156-325)||(43222765-43222935)
chr3 (168-254)||(39010468-39010554)
chr3 (156-331)||(37075687-37075864)
chr3 (155-254)||(36701106-36701206)
chr3 (155-246)||(33412609-33412700)
chr3 (158-331)||(27199705-27199878)
chr3 (156-266)||(37076109-37076219)
chr3 (156-304)||(49408180-49408326)
chr3 (153-254)||(8874133-8874234)
chr3 (151-263)||(12141128-12141241)
chr3 (157-266)||(50900534-50900644)
chr3 (155-315)||(5137365-5137526)
chr3 (158-315)||(8873694-8873850)
chr3 (158-294)||(2323382-2323517)
chr3 (192-315)||(37847206-37847328)
chr3 (155-230)||(20840560-20840635)
chr3 (155-304)||(20840956-20841106)
chr3 (155-208)||(23644462-23644515)
chr3 (155-208)||(30104482-30104535)
chr3 (153-238)||(39556039-39556124)
chr3 (158-230)||(25612447-25612519)
[»] chr7 (55 HSPs)
chr7 (155-331)||(7732857-7733033)
chr7 (152-331)||(9181529-9181708)
chr7 (158-331)||(25637568-25637741)
chr7 (155-331)||(48247961-48248138)
chr7 (157-331)||(27245574-27245748)
chr7 (156-331)||(15712366-15712541)
chr7 (158-329)||(14311659-14311830)
chr7 (158-331)||(5745642-5745815)
chr7 (155-331)||(7732488-7732664)
chr7 (155-331)||(16081299-16081475)
chr7 (158-331)||(26026688-26026861)
chr7 (155-329)||(786782-786957)
chr7 (155-331)||(11971334-11971514)
chr7 (153-331)||(27245201-27245380)
chr7 (155-329)||(16081671-16081845)
chr7 (158-331)||(28687869-28688041)
chr7 (155-275)||(16917713-16917833)
chr7 (154-329)||(26048319-26048493)
chr7 (153-304)||(28687591-28687742)
chr7 (155-331)||(48247587-48247767)
chr7 (155-331)||(2758068-2758244)
chr7 (161-331)||(35161171-35161342)
chr7 (155-331)||(25637197-25637374)
chr7 (155-332)||(5746008-5746186)
chr7 (153-331)||(24929673-24929856)
chr7 (158-331)||(26026320-26026494)
chr7 (155-331)||(9181779-9181958)
chr7 (156-331)||(39388636-39388813)
chr7 (155-289)||(5333880-5334014)
chr7 (155-331)||(34595142-34595318)
chr7 (158-331)||(26047960-26048124)
chr7 (158-331)||(11973772-11973945)
chr7 (158-331)||(787152-787329)
chr7 (157-266)||(5334254-5334363)
chr7 (156-315)||(9394117-9394274)
chr7 (157-331)||(14311317-14311492)
chr7 (162-246)||(35160660-35160746)
chr7 (156-331)||(35579256-35579430)
chr7 (155-245)||(39136686-39136776)
chr7 (153-297)||(4477700-4477844)
chr7 (155-243)||(39136991-39137079)
chr7 (158-317)||(33880969-33881132)
chr7 (158-315)||(35578902-35579058)
chr7 (245-330)||(35160892-35160976)
chr7 (157-331)||(34594585-34594758)
chr7 (155-289)||(49064034-49064167)
chr7 (157-294)||(9393738-9393874)
chr7 (249-304)||(5184488-5184543)
chr7 (153-220)||(40669689-40669756)
chr7 (155-266)||(45815344-45815454)
chr7 (155-304)||(2658839-2658989)
chr7 (155-245)||(49064176-49064266)
chr7 (158-209)||(5184431-5184482)
chr7 (157-266)||(33880622-33880732)
chr7 (153-238)||(35288901-35288986)
[»] chr2 (61 HSPs)
chr2 (155-331)||(38008321-38008497)
chr2 (155-331)||(11539637-11539814)
chr2 (155-328)||(20127736-20127910)
chr2 (155-331)||(33920981-33921158)
chr2 (155-328)||(6949451-6949625)
chr2 (155-331)||(62957-63133)
chr2 (155-331)||(4356126-4356302)
chr2 (149-331)||(11540008-11540190)
chr2 (155-331)||(4809249-4809425)
chr2 (155-331)||(20128107-20128283)
chr2 (155-331)||(16952935-16953113)
chr2 (155-331)||(17060906-17061084)
chr2 (155-329)||(43160382-43160557)
chr2 (153-331)||(42192238-42192416)
chr2 (155-331)||(42192612-42192789)
chr2 (155-331)||(38007950-38008127)
chr2 (155-331)||(13399790-13399965)
chr2 (155-331)||(44219644-44219820)
chr2 (158-331)||(13315496-13315673)
chr2 (152-329)||(4355752-4355929)
chr2 (155-331)||(43216079-43216255)
chr2 (158-331)||(15551044-15551218)
chr2 (159-331)||(16175719-16175892)
chr2 (155-331)||(32418159-32418333)
chr2 (156-331)||(16953304-16953479)
chr2 (155-331)||(44220013-44220191)
chr2 (158-331)||(4808882-4809055)
chr2 (158-331)||(33920615-33920788)
chr2 (155-331)||(649527-649702)
chr2 (155-265)||(5560051-5560161)
chr2 (158-323)||(15550676-15550842)
chr2 (149-331)||(63328-63516)
chr2 (158-329)||(43160012-43160184)
chr2 (158-331)||(9330164-9330338)
chr2 (155-297)||(32418550-32418692)
chr2 (155-316)||(24140064-24140220)
chr2 (187-323)||(13399454-13399590)
chr2 (228-331)||(5560920-5561023)
chr2 (153-289)||(6949854-6949992)
chr2 (155-313)||(31797166-31797323)
chr2 (157-237)||(649801-649881)
chr2 (155-331)||(25335977-25336146)
chr2 (155-331)||(28143400-28143575)
chr2 (158-217)||(9329915-9329974)
chr2 (251-329)||(43215805-43215883)
chr2 (155-304)||(14942241-14942392)
chr2 (158-331)||(22445642-22445816)
chr2 (158-262)||(20495196-20495301)
chr2 (195-269)||(5035903-5035978)
chr2 (165-241)||(2190536-2190612)
chr2 (144-238)||(35779697-35779791)
chr2 (158-269)||(3822924-3823036)
chr2 (158-265)||(3824143-3824251)
chr2 (158-216)||(9329833-9329892)
chr2 (254-331)||(9329980-9330056)
chr2 (155-315)||(18450830-18450991)
chr2 (155-315)||(28616998-28617159)
chr2 (155-189)||(17023600-17023634)
chr2 (158-223)||(5561018-5561083)
chr2 (155-208)||(20440523-20440576)
chr2 (155-208)||(20444749-20444802)
[»] chr5 (44 HSPs)
chr5 (155-331)||(28290014-28290190)
chr5 (153-331)||(19291354-19291533)
chr5 (156-331)||(8418991-8419165)
chr5 (155-331)||(15029679-15029855)
chr5 (155-293)||(18149733-18149871)
chr5 (155-331)||(21371066-21371242)
chr5 (155-329)||(28289684-28289858)
chr5 (159-331)||(38900648-38900818)
chr5 (147-331)||(15115465-15115647)
chr5 (153-323)||(38901020-38901188)
chr5 (156-331)||(32697593-32697771)
chr5 (157-331)||(39083361-39083536)
chr5 (158-331)||(4966819-4966991)
chr5 (155-331)||(4967139-4967317)
chr5 (146-331)||(18150093-18150279)
chr5 (155-331)||(16752582-16752757)
chr5 (193-331)||(5161620-5161759)
chr5 (158-297)||(21370689-21370836)
chr5 (158-323)||(14340785-14340953)
chr5 (158-235)||(14340401-14340478)
chr5 (156-315)||(10721787-10721945)
chr5 (157-331)||(22651347-22651521)
chr5 (155-315)||(27307061-27307220)
chr5 (155-286)||(5161983-5162115)
chr5 (156-315)||(28494845-28495003)
chr5 (155-245)||(22651767-22651857)
chr5 (155-315)||(41834445-41834605)
chr5 (156-315)||(27307444-27307605)
chr5 (180-315)||(32305843-32305977)
chr5 (158-245)||(20266371-20266458)
chr5 (155-245)||(17260676-17260766)
chr5 (180-266)||(13557017-13557103)
chr5 (278-331)||(32697458-32697511)
chr5 (157-226)||(16753045-16753114)
chr5 (286-331)||(22651715-22651760)
chr5 (155-236)||(28495296-28495377)
chr5 (153-208)||(164189-164244)
chr5 (254-329)||(14340479-14340554)
chr5 (150-208)||(5819421-5819479)
chr5 (155-315)||(8647822-8647983)
chr5 (155-208)||(24362328-24362381)
chr5 (154-238)||(8647437-8647521)
chr5 (154-230)||(19359135-19359211)
chr5 (157-245)||(28595182-28595270)
[»] chr1 (62 HSPs)
chr1 (157-331)||(34555750-34555926)
chr1 (158-331)||(21938566-21938739)
chr1 (155-331)||(9992154-9992331)
chr1 (155-331)||(30786771-30786948)
chr1 (150-331)||(1837500-1837681)
chr1 (154-329)||(10278922-10279094)
chr1 (155-328)||(16299055-16299227)
chr1 (155-319)||(37505067-37505232)
chr1 (155-331)||(52335880-52336056)
chr1 (156-331)||(44954596-44954771)
chr1 (153-331)||(9992525-9992703)
chr1 (157-331)||(10278550-10278725)
chr1 (153-331)||(50305152-50305333)
chr1 (155-329)||(2868080-2868254)
chr1 (157-331)||(44582059-44582233)
chr1 (158-329)||(8230013-8230184)
chr1 (149-331)||(443921-444103)
chr1 (153-331)||(23340181-23340359)
chr1 (147-331)||(44582427-44582613)
chr1 (158-331)||(44954229-44954402)
chr1 (158-331)||(37421163-37421338)
chr1 (155-329)||(4080021-4080195)
chr1 (158-331)||(17641734-17641912)
chr1 (155-331)||(29438930-29439107)
chr1 (157-321)||(2867913-2868077)
chr1 (155-332)||(34555379-34555558)
chr1 (156-331)||(16298683-16298858)
chr1 (153-331)||(37505438-37505615)
chr1 (155-331)||(8229637-8229816)
chr1 (158-315)||(45048158-45048314)
chr1 (158-331)||(6224700-6224875)
chr1 (158-289)||(29439333-29439465)
chr1 (157-328)||(1744330-1744500)
chr1 (193-329)||(17641403-17641539)
chr1 (158-257)||(37421388-37421488)
chr1 (155-254)||(30787245-30787344)
chr1 (158-315)||(39485068-39485224)
chr1 (155-331)||(50926611-50926787)
chr1 (154-331)||(9833522-9833699)
chr1 (156-331)||(23526659-23526833)
chr1 (155-331)||(29021234-29021411)
chr1 (157-248)||(50304441-50304532)
chr1 (157-331)||(50926232-50926408)
chr1 (158-305)||(45048532-45048678)
chr1 (155-315)||(44802557-44802717)
chr1 (155-315)||(17088526-17088685)
chr1 (249-331)||(50304876-50304958)
chr1 (157-330)||(44291303-44291477)
chr1 (153-331)||(29020878-29021056)
chr1 (153-262)||(25274754-25274863)
chr1 (249-331)||(30787142-30787224)
chr1 (157-266)||(23526965-23527074)
chr1 (181-304)||(44291708-44291831)
chr1 (155-331)||(17088146-17088326)
chr1 (155-228)||(39843497-39843570)
chr1 (158-254)||(50419393-50419490)
chr1 (155-317)||(48173748-48173911)
chr1 (155-262)||(50419698-50419806)
chr1 (195-274)||(36229406-36229486)
chr1 (150-269)||(52233733-52233853)
chr1 (149-315)||(29307326-29307493)
chr1 (155-262)||(52235106-52235214)
[»] chr8 (40 HSPs)
chr8 (155-326)||(15256203-15256377)
chr8 (153-331)||(18049588-18049767)
chr8 (155-331)||(34799079-34799256)
chr8 (153-331)||(9796724-9796902)
chr8 (158-331)||(18428131-18428305)
chr8 (157-331)||(28254427-28254602)
chr8 (151-331)||(9797096-9797277)
chr8 (155-331)||(599868-600044)
chr8 (157-331)||(2208716-2208891)
chr8 (155-331)||(16578466-16578642)
chr8 (156-331)||(28254796-28254971)
chr8 (155-331)||(35427182-35427358)
chr8 (155-287)||(41260271-41260403)
chr8 (156-331)||(42035773-42035948)
chr8 (153-331)||(7910986-7911164)
chr8 (155-317)||(5730817-5730979)
chr8 (158-331)||(18049961-18050134)
chr8 (155-327)||(599532-599704)
chr8 (155-331)||(34799453-34799629)
chr8 (155-293)||(15255853-15255991)
chr8 (155-331)||(41260631-41260807)
chr8 (157-331)||(5731182-5731356)
chr8 (158-329)||(35694242-35694421)
chr8 (155-331)||(16578108-16578285)
chr8 (155-330)||(6115481-6115657)
chr8 (156-331)||(35693869-35694046)
chr8 (155-328)||(26252811-26252982)
chr8 (227-331)||(35426885-35426989)
chr8 (155-328)||(42036144-42036318)
chr8 (155-329)||(7910616-7910791)
chr8 (155-263)||(18674148-18674256)
chr8 (158-331)||(28877260-28877432)
chr8 (158-208)||(35426845-35426895)
chr8 (158-315)||(18805167-18805322)
chr8 (272-331)||(35163815-35163874)
chr8 (155-245)||(9930112-9930202)
chr8 (162-253)||(28876910-28877002)
chr8 (158-262)||(2617748-2617853)
chr8 (155-315)||(11656841-11657002)
chr8 (182-253)||(10047083-10047155)
[»] chr6 (36 HSPs)
chr6 (154-331)||(25472382-25472560)
chr6 (158-331)||(24640555-24640728)
chr6 (155-331)||(5114468-5114644)
chr6 (155-331)||(31574095-31574271)
chr6 (154-331)||(31073512-31073689)
chr6 (155-331)||(31573720-31573901)
chr6 (155-322)||(5120848-5121015)
chr6 (155-328)||(30251064-30251238)
chr6 (155-328)||(29891453-29891630)
chr6 (158-331)||(25468852-25469027)
chr6 (155-331)||(29891080-29891256)
chr6 (150-299)||(28636287-28636435)
chr6 (228-331)||(28636566-28636669)
chr6 (149-295)||(31073137-31073290)
chr6 (153-315)||(32836383-32836544)
chr6 (155-330)||(35163557-35163733)
chr6 (158-266)||(35163187-35163295)
chr6 (157-300)||(33095716-33095859)
chr6 (153-301)||(33096007-33096159)
chr6 (238-331)||(30250774-30250867)
chr6 (153-208)||(22534217-22534272)
chr6 (158-227)||(31242809-31242878)
chr6 (155-299)||(835394-835537)
chr6 (156-209)||(30250722-30250775)
chr6 (158-237)||(32836010-32836089)
chr6 (146-208)||(18257629-18257691)
chr6 (155-315)||(12935157-12935318)
chr6 (155-231)||(835695-835771)
chr6 (218-324)||(11523747-11523854)
chr6 (157-228)||(18297662-18297733)
chr6 (148-206)||(4811365-4811423)
chr6 (153-206)||(10900424-10900477)
chr6 (155-315)||(11445371-11445532)
chr6 (155-208)||(28472637-28472690)
chr6 (155-208)||(29859826-29859879)
chr6 (158-238)||(3835188-3835268)
[»] scaffold0712 (2 HSPs)
scaffold0712 (154-331)||(6391-6568)
scaffold0712 (158-331)||(6761-6939)
[»] scaffold0709 (2 HSPs)
scaffold0709 (154-331)||(6409-6586)
scaffold0709 (158-331)||(6779-6957)
[»] scaffold0097 (2 HSPs)
scaffold0097 (155-331)||(46637-46814)
scaffold0097 (155-331)||(46266-46443)
[»] scaffold0025 (1 HSPs)
scaffold0025 (233-331)||(78395-78493)
[»] scaffold0007 (4 HSPs)
scaffold0007 (157-331)||(205738-205911)
scaffold0007 (155-245)||(210793-210883)
scaffold0007 (158-253)||(204931-205027)
scaffold0007 (158-253)||(205361-205457)
[»] scaffold0021 (1 HSPs)
scaffold0021 (155-300)||(159282-159427)
[»] scaffold0108 (2 HSPs)
scaffold0108 (155-315)||(15113-15272)
scaffold0108 (154-297)||(15503-15645)
[»] scaffold1432 (1 HSPs)
scaffold1432 (155-262)||(504-611)
[»] scaffold0951 (1 HSPs)
scaffold0951 (155-208)||(1667-1720)


Alignment Details
Target: chr4 (Bit Score: 163; Significance: 5e-87; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 153 - 331
Target Start/End: Complemental strand, 28465629 - 28465451
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28465629 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 28465530  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||    
T  28465529 ttgcaattttagtcctatctccctatttccaactccataaacgcacataaatagcagttttagtccaaccacctatgct 28465451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 153 - 331
Target Start/End: Original strand, 34789380 - 34789558
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34789380 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 34789479  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||| |||||||| |||||||||||||| ||||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  34789480 ttgcagttttagtcctatctccctatttcaaactccagaaacgcacataaatgacaattttagtccaaccacctatgct 34789558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 149 - 327
Target Start/End: Original strand, 21034229 - 21034408
Alignment:
Q  149 aaaattggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21034229 aaaattggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 21034328  T
Q  249 -ttttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccaccta 327  Q
     |||||| || ||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||    
T  21034329 tttttttacagttttagtcatatctccctatttccaactccataaacgcacataaatgacagttttagtccaaccaccta 21034408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 14440374 - 14440198
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14440374 ggcttaattatacttttggtcctaccattttgaccaacttacgaaaatggtcctatcttttttaaatcgaacaaaatcatccttaaactatatgtttttt 14440275  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| ||||||||||||||||||||||||||||| | |||||||||||||| ||| ||||||||||||||||||||||    
T  14440274 gcagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaaccacctatgct 14440198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 155 - 330
Target Start/End: Complemental strand, 56077870 - 56077695
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  56077870 ggcttaattacatttttggtcctaccattttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 56077771  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgc 330  Q
    ||| |||||||| |||||||||||||||||||| | ||||||||| |||| ||| |||||||||||||||||||||    
T  56077770 gcagttttagtcctatctccctatttccaactctagaaacgcacaaaaatgacagttttagtccaaccacctatgc 56077695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 158 - 331
Target Start/End: Original strand, 41114160 - 41114335
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg--ttttttg 255  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||  |||||||    
T  41114160 ttaatgacacttttggtcctaccattttgaccaactcacgaaaagggtcctatcttttttaaatcgaacaaaaacgtccttaaactatatgttttttttg 41114259  T
Q  256 caattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    || ||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||    
T  41114260 cagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacaattttagtccaaccacctatgct 41114335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 155 - 329
Target Start/End: Original strand, 12593024 - 12593198
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  12593024 ggcttaattacacttttggtcctaccagtttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 12593123  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatg 329  Q
    ||||||||| || ||||||||||||| |||||||| |||||||||||||| ||| |||||||||||| |||||||    
T  12593124 gcaattttaatcctatctccctattttcaactccagaaacgcacagaaatgacagttttagtccaacaacctatg 12593198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 157 - 331
Target Start/End: Complemental strand, 54441113 - 54440939
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgc 256  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54441113 cttaattacacttttggtcctaccattttgatcagctcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgc 54441014  T
Q  257 aattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    | |||||||| |||||||||||||||||||||| ||||||||   ||| ||| ||||||||||||||||||||||    
T  54441013 agttttagtcctatctccctatttccaactccagaaacgcacgtcaatgacagttttagtccaaccacctatgct 54440939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 46737201 - 46737025
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||||||||    
T  46737201 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 46737102  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||||||||| ||||| |||||||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  46737101 gcagttttagtcatatcttcctatctccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 46737025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 26974283 - 26974460
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 253  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  26974283 ggcttaattacacttttggtcctaccattttaacaaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 26974382  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    | || |||||||| |||||||||||||||||||||| |||||||||||||| ||| ||||||| |||||| |||||||    
T  26974383 tacagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagttcaaccaactatgct 26974460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 157 - 331
Target Start/End: Original strand, 28465083 - 28465257
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgc 256  Q
    ||||||||||||||| ||||| ||||||||||||||| |||||| || ||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  28465083 cttaattacacttttagtccttccattttgaccaacttacgaaattgatcctacctcttttaaatcgaacaaaatcgtccttaaactatatgttttttgc 28465182  T
Q  257 aattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    | |||||||||||||||||||||| |||||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  28465183 agttttagtcatatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 28465257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 158 - 331
Target Start/End: Complemental strand, 45839092 - 45838917
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt---tttt 254  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||   ||||    
T  45839092 ttaattacacttttggtcctactattttgaccaactcacgaaa-tggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttttt 45838994  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||| ||||| |||||||||||||||| |||||||||||||| ||| ||||||||||||||| ||||||    
T  45838993 gcagttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacatatgct 45838917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 158 - 331
Target Start/End: Original strand, 14439831 - 14440004
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 257  Q
    ||||||||| ||||||||||  ||||||||||||||||||||| ||||| || |||||||||||  ||||||||||||| ||||||||||||||||||||    
T  14439831 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcataccttttttaaattaaacaaaatcgtccctaaactatatgttttttgca 14439930  T
Q  258 attttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
     |||||||| |||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  14439931 gttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 14440004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 157 - 331
Target Start/End: Complemental strand, 34789927 - 34789752
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-ttttg 255  Q
    |||||||||||||||||||||  ||||||||||||||||||||| |||||||| || |||||||||||||||||| |||| ||||||||||||| |||||    
T  34789927 cttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatgtttttttg 34789828  T
Q  256 caattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    || |||||||| |||||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  34789827 cagttttagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttagtccaaccacctatgct 34789752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 158 - 331
Target Start/End: Original strand, 28166007 - 28166180
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 257  Q
    ||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  28166007 ttaattaaatttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatattttttttgca 28166106  T
Q  258 attttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
     |||||||| ||||||||||||| ||||| || |||||||||||||| | | ||||| | ||||||||||||||    
T  28166107 gttttagtcctatctccctattttcaactacaaaaacgcacagaaatgatagttttaattcaaccacctatgct 28166180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 155 - 328
Target Start/End: Original strand, 33689829 - 33690001
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||||||||  ||||||||||||||||| ||| |||||||| || ||||||||||||||||||||||||||||||||||| |||||    
T  33689829 ggcttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 33689927  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctat 328  Q
    ||| |||||||||||||||||||||| |||||||| ||||||||| |||| ||| | |||||||||||||||||    
T  33689928 gcagttttagtcatatctccctatttacaactccagaaacgcacataaatgacagtgttagtccaaccacctat 33690001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 55677504 - 55677327
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-ttt 253  Q
    |||||||||||||||||||||||   |||||||||||||||||||| |||||||| || ||||||||||||||||||||||  ||||||||||||| |||    
T  55677504 ggcttaattacacttttggtccttgtattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaactatatgtttttt 55677405  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    | ||||||||||| |||||||||||||||||||||||||||||||| |||| ||| ||||||||||| ||||||||||    
T  55677404 tacaattttagtcctatctccctatttccaactccataaacgcacataaatgacagttttagtccaatcacctatgct 55677327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 36168877 - 36168701
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||  | |||||| ||||||||||||    
T  36168877 ggcttaattacactcttggtcctaccattttgaccaactcacgaaaatgatcctattttttttaaatagaacaaaattattcttaaattatatgtttttt 36168778  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||  |||||||| ||||||||||||| |||||||||||| ||||| |||| ||| ||||||||||||||||||||||    
T  36168777 gcggttttagtcctatctccctattttcaactccataaatgcacataaatcacagttttagtccaaccacctatgct 36168701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 155 - 329
Target Start/End: Original strand, 46736655 - 46736829
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||| ||||||||| |||| |||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||    
T  46736655 ggcttaattatacttttggttctactattttgaccaactcacgaaaatggtcttattttttttaaatcgaacaaaattgtccttaaactatatgtttttt 46736754  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatg 329  Q
    |||  |||| || ||||||||||||| |||||||| |||||||||||||| ||| ||||||| ||||||| ||||    
T  46736755 gcagatttaatcctatctccctattttcaactccagaaacgcacagaaatgacagttttagttcaaccacttatg 46736829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 12593569 - 12593393
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| ||||| || || ||||||||||||||||||||||  |||||||||| ||||||    
T  12593569 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtctgtaaactatatatttttt 12593470  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||| ||||||||||||| |||||||| |||||||||| ||| ||| ||||||||||||||| ||||||    
T  12593469 gcagttttagtcctatctccctattttcaactccagaaacgcacaggaatgacagttttagtccaaccacatatgct 12593393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 157 - 331
Target Start/End: Original strand, 54440573 - 54440745
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgc 256  Q
    |||||||||||||||||||||  ||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |||||  ||||||||||||    
T  54440573 cttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaac--tatgttttttgc 54440670  T
Q  257 aattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    | |||||||| ||||||||||||| ||||| || ||| |||||||||| ||| ||||||||||||||||||||||    
T  54440671 agttttagtcctatctccctattttcaacttcagaaatgcacagaaatgacagttttagtccaaccacctatgct 54440745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 158 - 331
Target Start/End: Original strand, 6616675 - 6616849
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttttgc 256  Q
    ||||||||||||||||| ||| |||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  6616675 ttaattacacttttggttctatcattttgatcaactcacgaaaatggtcttattttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgc 6616774  T
Q  257 aattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
      | |||||| || ||| ||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  6616775 tgtgttagtcctacctctctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 6616849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 21034783 - 21034606
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactata-tgttttt 253  Q
    |||||||||||| ||||||||||  ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| | ||||||| | |||||    
T  21034783 ggcttaattacaattttggtccttgcattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgtccctgaactatatttttttt 21034684  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||| |||||||  |||||||||||||||||||||| |||| |||| |||| ||| ||||||||||||||||||||||    
T  21034683 tgcagttttagttctatctccctatttccaactccagaaacacacaaaaatgacagttttagtccaaccacctatgct 21034606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 34807116 - 34807293
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 253  Q
    |||||||||||||||||||||||  |||||||| |||||||||||| ||||| || || ||||||||||||||||||||||| |||| |||||| |||||    
T  34807116 ggcttaattacacttttggtccttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaagtatatgtttttt 34807215  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||| |||||||| ||||||| |||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  34807216 tgcagttttagtcctatctccatatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 34807293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 158 - 331
Target Start/End: Complemental strand, 34807682 - 34807509
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 257  Q
    ||||||| | |||||||| ||  ||||||| ||||||||||||||  | ||||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  34807682 ttaattatatttttggtcttattattttgatcaactcacgaaaattattctatcttttttaattcgaacaaaatcgtccttaaactatatgtttttggca 34807583  T
Q  258 attttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
     |||||||| |||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||| ||||||    
T  34807582 gttttagtcctatctccctatttccaactccataaacgcatagaaatgacagttttagtccaaccacatatgct 34807509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 45838547 - 45838723
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||| ||||||||||||||||   ||||||||||||||||| || |||||||| || ||||||||||||||||||||||| |||||||||||||||||    
T  45838547 ggcttatttacacttttggtccttgtattttgaccaactcacgtaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 45838646  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||| ||||||||||||||| ||| || |||||||||||||| | | |||| |||||||||||||||||    
T  45838647 gcagttttagtcctatctccctatttcctacttcaaaaacgcacagaaatgatagtttttgtccaaccacctatgct 45838723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 149 - 318
Target Start/End: Original strand, 19528863 - 19529033
Alignment:
Q  149 aaaattggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 248  Q
    ||||| |||||||||||||||||||||||  |||||||||||| |||||||| |||||||| || |||||||||||| |||||||||| |||||||||||    
T  19528863 aaaataggcttaattacacttttggtccttgcattttgaccaattcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 19528962  T
Q  249 -ttttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtcc 318  Q
     ||||||||| |||||||| |||||||||||||||||||||  |||||||||||||| ||| |||||||||    
T  19528963 tttttttgcagttttagtcctatctccctatttccaactccggaaacgcacagaaatgacagttttagtcc 19529033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 158 - 331
Target Start/End: Original strand, 35643558 - 35643743
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg--------- 248  Q
    ||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||             
T  35643558 ttaatcacactattggtcttaccattttgaccaactcacgaaaatggtcctatctttttaaaattgaataaaatcgtccttaaactatatgttttttttt 35643657  T
Q  249 ---ttttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
       ||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  35643658 tttttttttgcagttttagtcctatctccctatttacaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 35643743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 157 - 331
Target Start/End: Complemental strand, 24852010 - 24851835
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-ttttg 255  Q
    |||||||| ||||||||||||  ||||||||||||||||||||| || ||||| || ||||||||||||||||||||||| ||||||||||||| |||||    
T  24852010 cttaattatacttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttg 24851911  T
Q  256 caattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    || |||||||| |||||  ||||||||||||||| |||||||||||||| | | ||||||| ||||||||||||||    
T  24851910 cagttttagtcctatctttctatttccaactccagaaacgcacagaaatgaaagttttagtacaaccacctatgct 24851835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 158 - 293
Target Start/End: Original strand, 33777635 - 33777770
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 257  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| || ||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  33777635 ttaattacacttttgttcctaccattttgaccaactcacgaaaatgatcatatttttttaaaatcgaacaaaatcgtccttaaactatatgttttttgca 33777734  T
Q  258 attttagtcatatctccctatttccaactccataaa 293  Q
    |||||| || |||||| | |||| ||||||||||||    
T  33777735 attttaatcctatctctccattttcaactccataaa 33777770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 19529240 - 19529063
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-ttt 253  Q
    |||||||||||||||||| |||||||||||||||||||| |  |||||| | |||||| |||||||| ||||||||||||| |||||||||||||| |||    
T  19529240 ggcttaattacacttttgctcctaccattttgaccaacttataaaaatgattctatctcttttaaattgaacaaaatcgtctttaaactatatgtttttt 19529141  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||| |||||||  ||||||| |||||||||||  | |||||||||||||| ||| |||||||||||||| |||||||    
T  19529140 tgcagttttagttctatctccatatttccaacttaaaaaacgcacagaaatgacagttttagtccaaccatctatgct 19529063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 158 - 331
Target Start/End: Original strand, 41608377 - 41608551
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt--- 254  Q
    ||||||||||||||||||||  |||||||| ||||||| |||| ||||| || || |||||||||||||||||||||||  ||||||||||||||||       
T  41608377 ttaattacacttttggtccttgcattttgatcaactcatgaaattggtcatacctcttttaaatcgaacaaaatcgtcc--aaactatatgttttttttt 41608474  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||| ||||||| ||||||||||| || |||||||||||||| ||| ||||||||||||||||||||||    
T  41608475 gcagttttagtcctatctccatatttccaacttcaaaaacgcacagaaatgacagttttagtccaaccacctatgct 41608551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 158 - 331
Target Start/End: Complemental strand, 16215038 - 16214865
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 257  Q
    ||||||| ||||||||||||| |||||||| ||||| ||||||||| || |||||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  16215038 ttaattatacttttggtcctatcattttgatcaacttacgaaaatgatcatatcttttttaaattgaataaaatcgtccttaaactatatattttttgca 16214939  T
Q  258 attttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
     ||||| |  ||||| ||||||| |||||||| |||| |||| |||| | | ||||||||||||||||||||||    
T  16214938 gttttaattctatcttcctattttcaactccagaaacacacataaatgatagttttagtccaaccacctatgct 16214865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 158 - 329
Target Start/End: Original strand, 36168332 - 36168506
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg---tttttt 254  Q
    ||||||||||||||| ||||  ||||||||||||| ||||||| ||||| || || |||||||||||||||||||||||||||| ||||||   ||||||    
T  36168332 ttaattacacttttgctccttgcattttgaccaacccacgaaattggtcttacctcttttaaatcgaacaaaatcgtccttaaattatatgttttttttt 36168431  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatg 329  Q
    ||| |||||||| |||||||||||||| ||||||| ||||||| | |||| ||| || |||||||||||||||||    
T  36168432 gcagttttagtcttatctccctatttctaactccagaaacgcatataaatgacagttatagtccaaccacctatg 36168506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 157 - 293
Target Start/End: Complemental strand, 33778156 - 33778020
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgc 256  Q
    ||||||||||||||| || ||||||||||||| |||||||||||||| | ||| || ||||||||| ||||||||||| | |||| ||||||||||||||    
T  33778156 cttaattacacttttcgttctaccattttgactaactcacgaaaatgattctacctcttttaaatcaaacaaaatcgttcctaaattatatgttttttgc 33778057  T
Q  257 aattttagtcatatctccctatttccaactccataaa 293  Q
    | |||||||  ||||||||||||||||||||||||||    
T  33778056 agttttagttctatctccctatttccaactccataaa 33778020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 155 - 246
Target Start/End: Original strand, 24851316 - 24851407
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactata 246  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  24851316 ggcttaattacacttttgatcctaccattttgaccaactcacgaaaatggtgctatcttttttaaattgaacaaaatcgtccttaaactata 24851407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 158 - 331
Target Start/End: Complemental strand, 229702 - 229529
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 256  Q
    |||||||||||||||||| |  ||||||||||| ||||||||||||||| |  || ||| ||||| |||||||||||||||||||||| ||| |||||||    
T  229702 ttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgcctctttcaaatcaaacaaaatcgtccttaaactatcatg-tttttgc 229604  T
Q  257 aattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    | ||||| || || |||| ||||| |||||||| |||||||||||| | ||||||||||| ||||||||||||||    
T  229603 agttttaatcctacctccttattttcaactccagaaacgcacagaagtgacaattttagtacaaccacctatgct 229529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 169 - 331
Target Start/End: Original strand, 35193322 - 35193483
Alignment:
Q  169 tttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcaattttagtcat 268  Q
    |||||||||  |||||||| || |||||||||||||||||| || ||| ||||||||||||||||||| |||||||||||||||||||| |||||||| |    
T  35193322 tttggtcctcgcattttgatcagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactatatgttttttgcagttttagtcct 35193421  T
Q  269 atctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||| ||||||| ||||| || ||||||| |||||| ||| |||||| || ||| ||||||||    
T  35193422 atct-cctattttcaacttcagaaacgcagagaaatgacagttttagacctaccccctatgct 35193483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 180 - 331
Target Start/End: Complemental strand, 17504480 - 17504329
Alignment:
Q  180 cattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcaattttagtcatatctccctatt 279  Q
    |||||||| || ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||  || ||||   ||    
T  17504480 cattttgaacagctcacgaaaatggtcctatctcttttaaatcgaacaaaaccgtccttaaactatatgttttttgcaattttagtactacctcctattt 17504381  T
Q  280 tccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    | |||||| | ||||||| |||||| ||| |||||| || ||| ||||||||    
T  17504380 ttcaactctagaaacgcagagaaatgacagttttagacctaccccctatgct 17504329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 146 - 246
Target Start/End: Complemental strand, 41608971 - 41608870
Alignment:
Q  146 tataaaatt-ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaacta 244  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||| ||||||||||| |||||||||    
T  41608971 tataaaattaggcttaattacacttttggtcctaccattttgaccaactcacgaaattggtcctacctcttttaaatccaacaaaatcgttcttaaacta 41608872  T
Q  245 ta 246  Q
    ||    
T  41608871 ta 41608870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 145 - 289
Target Start/End: Complemental strand, 6617217 - 6617074
Alignment:
Q  145 ttataaaattggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaacta 244  Q
    ||||||||| || ||||||||| ||||| | ||  ||||||||| ||||||||||| |||||||| || |||||||||||| |||||||||| |||||||    
T  6617217 ttataaaat-ggtttaattacatttttgctacttgcattttgactaactcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaacta 6617119  T
Q  245 tatgttttttgcaattttagtcatatctccctatttccaactcca 289  Q
    ||| ||||||||| |||||||| ||||||||||| ||||||||||    
T  6617118 tattttttttgcagttttagtcctatctccctatctccaactcca 6617074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 1397597 - 1397683
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 243  Q
    |||||||||||||||| ||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  1397597 cttaattacacttttgatccaaccattttgaccaactcataaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 1397683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 158 - 331
Target Start/End: Original strand, 229164 - 229337
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 256  Q
    ||||||||||||||||||||   |||||||||| ||| ||||||||||| |  || ||| |||| ||||||||||||||||||||||| ||| |||||||    
T  229164 ttaattacacttttggtcctcgtattttgaccagctcgcgaaaatggtcttgcctctttcaaattgaacaaaatcgtccttaaactatcatg-tttttgc 229262  T
Q  257 aattttagtcatatctccc-tatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    | |||||||  || ||||| ||||| |||||||||||||||||| || | ||| ||||||||||||||||||||||    
T  229263 agttttagttcta-ctcccttattttcaactccataaacgcacaaaagtgacagttttagtccaaccacctatgct 229337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 158 - 283
Target Start/End: Complemental strand, 26974788 - 26974662
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-ttttgc 256  Q
    ||||||||| ||||||||||  ||||||||  || |||||||| |||||||| || |||||||||||||||||| |||| ||||||||||||| ||||||    
T  26974788 ttaattacatttttggtccttgcattttgaataattcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatgtttttttgc 26974689  T
Q  257 aattttagtcatatctccctatttcca 283  Q
    | |||||||||||||| ||||||||||    
T  26974688 agttttagtcatatcttcctatttcca 26974662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 17503974 - 17504149
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 253  Q
    |||||||||| ||| ||||||||  ||||||||||| |||||||||||||||||  || ||| |||| ||||| || ||||| |||||||| ||||||||    
T  17503974 ggcttaattatactgttggtcctcgcattttgaccatctcacgaaaatggtcctgcctctttcaaatggaacataaccgtcc-taaactatcatgttttt 17504072  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||| |||||||| || || ||||||| |||||||| ||||| | |||||| ||| |||||| || ||| ||||||||    
T  17504073 tgcagttttagtcctacct-cctattttcaactccagaaacgtagagaaatgacagttttagacctaccccctatgct 17504149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 249 - 329
Target Start/End: Original strand, 24851559 - 24851639
Alignment:
Q  249 ttttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatg 329  Q
    ||||||||| |||||||| |||||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||    
T  24851559 ttttttgcagttttagtcttatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatg 24851639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 40160094 - 40160269
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||| ||||| |||   |||||| |||| ||||||||||| ||| |  || ||||||||||||||||| ||||| |||||||||||||||||    
T  40160094 ggcttaattacatttttgatccccgcattttaaccagctcacgaaaatagtcatgcctcttttaaatcgaacaaaaccgtccctaaactatatgtttttt 40160193  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||| || || ||||||| |||||| ||||||    |||||| ||| |||||| || ||| ||||||||    
T  40160194 gcagttttagtcctacct-cctattttcaactctataaacatggagaaatgacagttttagacctaccccctatgct 40160269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 156 - 266
Target Start/End: Original strand, 23986521 - 23986632
Alignment:
Q  156 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 254  Q
    |||||||| |||||||||||||  ||||||||||| ||||||||||||||| | ||| ||| |||||||||||||  |||| |||||||| |||||||||    
T  23986521 gcttaatttcacttttggtcctcacattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaactgtccctaaactatcatgtttttt 23986620  T
Q  255 gcaattttagtc 266  Q
    ||| ||||||||    
T  23986621 gcagttttagtc 23986632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 302
Target Start/End: Complemental strand, 35193848 - 35193702
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 253  Q
    |||||||||||||||||||||||  ||||||||  | |||||||||||||||||  || ||| ||||| ||||||| ||||| |||||||| ||||||||    
T  35193848 ggcttaattacacttttggtccttgcattttgataagctcacgaaaatggtcctgcctctttcaaatctaacaaaaccgtcc-taaactatcatgttttt 35193750  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaa 302  Q
    ||   ||||||||||| || ||||||| |||||||| ||||||| ||||    
T  35193749 tgatgttttagtcatacct-cctattttcaactccagaaacgcagagaa 35193702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 153 - 295
Target Start/End: Complemental strand, 40160638 - 40160497
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttt 251  Q
    |||| ||||||||| ||||||||||  ||||||||||||||||||||||| ||| |  || ||| |||| |||||||| ||||| |||||||| ||||||    
T  40160638 ttggtttaattacatttttggtccttgcattttgaccaactcacgaaaatagtcatgcctctttcaaattgaacaaaaccgtcc-taaactatcatgttt 40160540  T
Q  252 tttgcaattttagtcatatctccctatttccaactccataaacg 295  Q
    |||||| |||||||| || || ||||||| |||||||| |||||    
T  40160539 tttgcagttttagtcttacct-cctattttcaactccagaaacg 40160497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 156 - 321
Target Start/End: Original strand, 18965141 - 18965306
Alignment:
Q  156 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 254  Q
    ||||||||||| ||||| ||||  |||||| ||  ||||||||||| |||| |  || ||| |||||||||||||||||||||||||||| ||| |||||    
T  18965141 gcttaattacatttttgatcctcacattttaacttactcacgaaaacggtcttgcctctttcaaatcgaacaaaatcgtccttaaactatcatg-ttttt 18965239  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaac 321  Q
    ||| |||||||  || |||| ||||| |||||| | ||||||| | |||| ||| ||||||||||||    
T  18965240 gcagttttagttctacctccttattttcaactctagaaacgcatataaatgacagttttagtccaac 18965306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 262
Target Start/End: Complemental strand, 30598067 - 30597958
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 252  Q
    ||||||| |||||||||||||||||    |||||||||||||||| || |||| || ||| ||||||||||||||||||||||| |||| ||||| |||     
T  30598067 ttggcttgattacacttttggtcctcgtgttttgaccaactcacggaattggttctgtctcttttaaatcgaacaaaatcgtccctaaattatatttttg 30597968  T
Q  253 ttgcaatttt 262  Q
    ||||| ||||    
T  30597967 ttgcactttt 30597958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 189 - 324
Target Start/End: Complemental strand, 18965648 - 18965513
Alignment:
Q  189 caactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcaattttagtcatatctccctatttccaactc 287  Q
    |||||||| ||||||||| |  ||||||| | | |||||||||||| | |||||||| |||||||| | | |||||||||||   |||||||| ||||||    
T  18965648 caactcacaaaaatggtcatgccttttttgatttgaacaaaatcgttcctaaactatcatgttttt-gtagttttagtcatactcccctattttcaactc 18965550  T
Q  288 cataaacgcacagaaataacaattttagtccaaccac 324  Q
    |||||||||||| |||| ||| |||||||||||||||    
T  18965549 cataaacgcacataaatgacagttttagtccaaccac 18965513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 155 - 314
Target Start/End: Original strand, 24335761 - 24335920
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 253  Q
    |||||||||||||||| | ||||  ||||||||||| ||||||||||||||| |  || ||| ||||||||||||| |||   | |||||| ||||||||    
T  24335761 ggcttaattacactttcgatccttgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtatctgaactatcatgttttt 24335860  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaatttta 314  Q
    || | |||||||| || | |||||||| |||||||| ||||||||| |||| ||| |||||    
T  24335861 tggagttttagtccta-caccctattttcaactccaaaaacgcacataaatgacagtttta 24335920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 150 - 228
Target Start/End: Original strand, 44219370 - 44219448
Alignment:
Q  150 aaattggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaa 228  Q
    |||||| |||||||||||||||||||||   ||||| |||||||||||||| ||||||| |||||||||||| ||||||    
T  44219370 aaattgacttaattacacttttggtcctcgtattttaaccaactcacgaaattggtcctctcttttttaaattgaacaa 44219448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 304
Target Start/End: Complemental strand, 24336307 - 24336160
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttg 255  Q
    |||||||||||||||| ||||  ||||||||| | |||||||||||||||||  || ||| ||||||||||||| ||| | |||| ||| ||||||||||    
T  24336307 cttaattacacttttgatcctcgcattttgacaagctcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgttcctaaattatcatgttttttg 24336208  T
Q  256 caattttagtcatatctccctatttccaactccataaacgcacagaaat 304  Q
    |  |||||||| || | || ||||| |||||||| ||||| | ||||||    
T  24336207 ctcttttagtccta-ccccatattttcaactccagaaacgtatagaaat 24336160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 51310051 - 51309936
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 253  Q
    ||||||||| |||||||||||||  |||||| |||| ||||||||||||||| |  || ||| |||||||||||||  |||| |||||||| ||||||||    
T  51310051 ggcttaattgcacttttggtcctcgcatttttaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaacagtccctaaactatcatgttttt 51309952  T
Q  254 tgcaattttagtcata 269  Q
    | |  |||||||||||    
T  51309951 tacggttttagtcata 51309936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 10795854 - 10795777
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtc 235  Q
    ||||||||||||||| |||   |||||||| || ||||||||| ||||||| ||| ||| ||||||||||||||||||    
T  10795854 ttaattacacttttgatccccgcattttgaacagctcacgaaattggtcctctctctttcaaatcgaacaaaatcgtc 10795777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 245 - 289
Target Start/End: Complemental strand, 35644014 - 35643970
Alignment:
Q  245 tatgttttttgcaattttagtcatatctccctatttccaactcca 289  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||    
T  35644014 tatgttttttgcagttttagtcttatctccctatttccaactcca 35643970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 35644106 - 35644042
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaat 221  Q
    |||||||||||||||||||||  |||||||||||||||||||||  |||| || || ||||||||    
T  35644106 cttaattacacttttggtccttgcattttgaccaactcacgaaataggtcatacctcttttaaat 35644042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 315
Target Start/End: Original strand, 25447246 - 25447408
Alignment:
Q  154 tggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttt 252  Q
    ||||||||||||||||||||||||    ||||| || ||||| |||| |||||||  | |||| |||  ||||||||  |||||| || ||| || |||     
T  25447246 tggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 25447345  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttag 315  Q
    ||||| |||| ||| || ||||   |||| ||||||||||||||| |||||| ||||||||||    
T  25447346 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacaattttag 25447408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 51641374 - 51641302
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaa 229  Q
    ||||||||||||||| |||||  ||||| ||| ||||||||||| || ||||  |||||||||||| ||||||    
T  51641374 cttaattacacttttagtccttgcatttagacaaactcacgaaattgatcctgccttttttaaatcaaacaaa 51641302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 12930804 - 12930879
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 230  Q
    ||||||||| ||||||||||||   |||||| |||||||||||||| |||   | ||||||| |||||||||||||    
T  12930804 ggcttaattgcacttttggtccgcacattttaaccaactcacgaaattggcattgtctttttcaaatcgaacaaaa 12930879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 315
Target Start/End: Original strand, 46193404 - 46193566
Alignment:
Q  154 tggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttt 252  Q
    ||||||||||||||||||||||||    ||||| || |||||||||| |||||||  | |||| |||  ||||||||  |||||| || ||| || |||     
T  46193404 tggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttg 46193503  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttag 315  Q
    ||||| |||| ||| || ||||   |||| ||||||| ||||||| |||||| ||| ||||||    
T  46193504 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 46193566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 314
Target Start/End: Original strand, 15523235 - 15523395
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaacta-tatgttttt 253  Q
    |||||||||||||||||||||||    ||||| || |||||||||| |||||||  | |||| |||  ||||||||  |||||| || || ||| |||||    
T  15523235 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattattttttt 15523334  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaatttta 314  Q
    |||| |||| ||| || ||||   |||| ||||| | ||||||| |||||| ||| |||||    
T  15523335 tgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagtttta 15523395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 208
Target Start/End: Complemental strand, 16691619 - 16691563
Alignment:
Q  152 attggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcct 208  Q
    ||||||||||||||||||||| |||     |||||||| ||||||||||||||||||    
T  16691619 attggcttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcct 16691563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 20958403 - 20958351
Alignment:
Q  156 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcct 208  Q
    |||||||||||||||| |||||   |||||| || ||||||||||||||||||    
T  20958403 gcttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcct 20958351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 158; Significance: 5e-84; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 158 - 331
Target Start/End: Original strand, 49951549 - 49951722
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49951549 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 49951648  T
Q  258 attttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||    
T  49951649 attttagtcctatctccctatttccaactccataaacgcacataaataacagttttagtccaaccacatatgct 49951722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 41998229 - 41998406
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 253  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  41998229 ggcttaattacacttttggtcctaccattttgaccaactcgcgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 41998328  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||    
T  41998329 tgcagttttagtcatatctccctatttccaactccataaacgaacagaaatgacagttttagtccaaccacctatgct 41998406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 153 - 331
Target Start/End: Original strand, 43678293 - 43678471
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  43678293 ttggcttaattacacttttggtcctaccattttgaccaactcacgaacatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 43678392  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||| |||||||| |||||||||||||||||||||| || |||||| |||| ||| ||||||||||||||||||||||    
T  43678393 ttgcagttttagtcttatctccctatttccaactccagaagcgcacataaatgacagttttagtccaaccacctatgct 43678471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 158 - 331
Target Start/End: Complemental strand, 51473399 - 51473225
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-ttttgc 256  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  51473399 ttaattacacttttgatcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgc 51473300  T
Q  257 aattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    | |||||||| |||||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  51473299 agttttagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttagtccaaccacctatgct 51473225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 149 - 331
Target Start/End: Original strand, 55389599 - 55389781
Alignment:
Q  149 aaaattggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 248  Q
    ||||| ||| ||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  55389599 aaaataggcataattacacttttggtcctcccatttcgaccaactcacgaaaatggtcctaccttttttaaatcgaacaaaatcgtccttaaactatatg 55389698  T
Q  249 ttttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||||||| |||||||| |||||||||||||||||||||| |||||||||||||| ||| ||||||| ||||||||||||||    
T  55389699 ttttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagttcaaccacctatgct 55389781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 158 - 331
Target Start/End: Complemental strand, 44677015 - 44676842
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44677015 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 44676916  T
Q  258 attttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||||||| |||||| |||||| |||||||| ||||||||| |||| ||| |||||||| |||||||||||||    
T  44676915 attttagtcctatctctctattttcaactccagaaacgcacataaatgacagttttagtctaaccacctatgct 44676842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 146 - 331
Target Start/End: Complemental strand, 32730944 - 32730759
Alignment:
Q  146 tataaaattggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 245  Q
    |||||||| | ||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  32730944 tataaaatagacttaattacacttttggtcataccattttaaccaactcaagaaaatggtcctatcttttttaaattgaacaaaatcgtccttaaactat 32730845  T
Q  246 atgttttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||||||||||| ||||| || |||||||||||||| ||||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  32730844 atgttttttgcagttttaatcctatctccctatttcaaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 32730759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 154 - 331
Target Start/End: Complemental strand, 50662959 - 50662782
Alignment:
Q  154 tggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 253  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  50662959 tggcttaattatacttttggtcctaccattttgacaaactcacgaaaatagtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 50662860  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||| |||||||| || |||||||||| |||||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  50662859 tgcagttttagtcctagctccctattttcaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 50662782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 155 - 323
Target Start/End: Original strand, 38535309 - 38535477
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38535309 ggcttaattacacttttggtcctaccattttgaccaactcaggaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 38535408  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaacca 323  Q
    ||| ||| |||| |||||||||||||||||||||| ||||||||| |||| ||| ||||||| ||||||    
T  38535409 gcagtttcagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttagttcaacca 38535477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 153 - 331
Target Start/End: Complemental strand, 51829088 - 51828910
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 252  Q
    ||||||||||||||||||||||| ||| ||||||| |||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||    
T  51829088 ttggcttaattacacttttggtcatactattttgatcaactcacgaaaatggtcgtatcttttttaattcaaacaaaatcgtccttaaactatatgtttt 51828989  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||| |||||||| ||||||||||||||||||| |||||||||||| |||| ||| ||||||||||||||||||||||    
T  51828988 ttgcagttttagtcctatctccctatttccaacttcataaacgcacataaatgacagttttagtccaaccacctatgct 51828910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 47431696 - 47431873
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||| |||||||||||| |||||    
T  47431696 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctttaaactatatgtttttt 47431795  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||| |||||||| |||||||||||||| ||||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  47431796 tgcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 47431873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 330382 - 330206
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    ||||||||||||| |||||||||  |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||    
T  330382 ggcttaattacacatttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccctaaactatatgtttttt 330283  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| ||||||||||||||||||||||||||||| | |||||||||||||| ||| ||||| ||||||||||||||||    
T  330282 gcagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttaatccaaccacctatgct 330206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 152 - 331
Target Start/End: Complemental strand, 51828507 - 51828327
Alignment:
Q  152 attggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt- 250  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||     
T  51828507 attggcttaattacacttttggtcctaccactttgaccaactcacgaaaatggtcatatattttttaaatcgaacaaaattgtccttaaactatatgttt 51828408  T
Q  251 ttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||||| |||||||| |||||||||||||||||||||| ||||||| |||||| ||| |||||||||||| |||||||||    
T  51828407 ttttgcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagttttagtccaactacctatgct 51828327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 155 - 332
Target Start/End: Original strand, 2051295 - 2051476
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg----tt 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    ||    
T  2051295 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgttcttaaactatatgtttttt 2051394  T
Q  251 ttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgctt 332  Q
    ||||||| ||||| || ||| |||||||||| ||||||| ||||||||| |||| ||| |||||||||||||||||||||||    
T  2051395 ttttgcagttttattcctatttccctatttctaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgctt 2051476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 155 - 322
Target Start/End: Complemental strand, 16701338 - 16701168
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt---t 251  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||   |    
T  16701338 ggcttaattacatttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaattcgaacaaaatcgtccttaaactatatgtttttt 16701239  T
Q  252 tttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaacc 322  Q
    |||||| |||||||||||||||||||||||||||||||||||||||  ||||| ||| |||||||||||||    
T  16701238 tttgcagttttagtcatatctccctatttccaactccataaacgcatcgaaattacagttttagtccaacc 16701168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 156 - 331
Target Start/End: Complemental strand, 46013968 - 46013792
Alignment:
Q  156 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-tttt 254  Q
    ||||||||||||||||||| ||| ||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  46013968 gcttaattacacttttggtactatcattttgaccaactcccaaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttt 46013869  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||| |||||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  46013868 gcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 46013792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 51827957 - 51828133
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||||||||    
T  51827957 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctagctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 51828056  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||| ||||||||||||| |||||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  51828057 gcatttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 51828133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 52375877 - 52375701
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||| || |||||||| |||||||||||||| |||||||||||||||||    
T  52375877 ggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaattgaacaaaatcgtccataaactatatgtttttt 52375778  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| ||||||||||||  ||||||||||||||||| |||||||||||||| ||| ||||||||||||||| ||||||    
T  52375777 gcagttttagtcatattcccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacttatgct 52375701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 153 - 331
Target Start/End: Complemental strand, 40275641 - 40275464
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 252  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||| |||||||| || ||||||||||||||||||||||  |||||||||||||||    
T  40275641 ttggcttaattacacttttggtcctcacattttgaccaactcacgaaa-tggtcctacctcttttaaatcgaacaaaatcgtctctaaactatatgtttt 40275543  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||| ||||||||||||| ||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  40275542 ttgcagttttagtcatatccccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgct 40275464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 34104638 - 34104813
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    ||||| ||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  34104638 ggcttcattacactttttgttctaccattttgaccaactcacgaaaatggttctatcttttttaaattgaacaaaatcgtcattaaactatatgtttttt 34104737  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||||||||| |||||||||| ||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  34104738 gcagttttagtcatatct-cctatttccagctccagaaacgcacaaaaatgacatttttagtccaaccacctatgct 34104813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 55390143 - 55389967
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||||||||  |||||| ||||| ||||||||||||||||| |||||||||||| ||||||||||||  |||||||||||||||||    
T  55390143 ggcttaattacacttttggtcctcgcattttaaccaattcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtcactaaactatatgtttttt 55390044  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    | | |||||||| || |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  55390043 gtagttttagtcctacctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 55389967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 149 - 328
Target Start/End: Original strand, 40838646 - 40838825
Alignment:
Q  149 aaaattggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 248  Q
    ||||| || ||||||||||||||| ||||  ||||||||||||||||||||||||||| || || ||||||||| ||||||||||||| |||||||||||    
T  40838646 aaaataggtttaattacacttttgatcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcaaacaaaatcgtccataaactatatg 40838745  T
Q  249 ttttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctat 328  Q
    ||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||    
T  40838746 ttttttgcagttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctat 40838825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 155 - 289
Target Start/End: Complemental strand, 49720907 - 49720773
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  49720907 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 49720808  T
Q  255 gcaattttagtcatatctccctatttccaactcca 289  Q
    ||| |||||||| ||||||||||||||||||||||    
T  49720807 gcagttttagtcttatctccctatttccaactcca 49720773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 153 - 331
Target Start/End: Complemental strand, 49952094 - 49951916
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 252  Q
    |||||||||||||| ||||||||||  ||||||||||||||||||||| ||||| || || |||||||||||||||||||||| |||||||| |||||||    
T  49952094 ttggcttaattacatttttggtccttgcattttgaccaactcacgaaattggtcttacctcttttaaatcgaacaaaatcgtcattaaactacatgtttt 49951995  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||| |||||||||||||||||||||| |||||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  49951994 ttgcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 49951916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 153 - 331
Target Start/End: Complemental strand, 40839200 - 40839022
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 252  Q
    |||| ||||||||||||||||||||  ||||||||| ||||||||||||||||| || || ||||||||||||||||||||||| |||||||||||||||    
T  40839200 ttggtttaattacacttttggtcctcacattttgacaaactcacgaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatgtttt 40839101  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||| |||||||| |||||||||||||| ||||||| |||||||||||||| ||| |||||||||||| || ||||||    
T  40839100 ttgcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttagtccaactacatatgct 40839022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 155 - 325
Target Start/End: Original strand, 14654199 - 14654361
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14654199 ggcttaattacacttttgatactaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactatatgtttttt 14654298  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacc 325  Q
    ||| |||||||        ||||||||||||||| ||||||||||||||| ||| ||||||||||||||||    
T  14654299 gcatttttagt--------cctatttccaactccgtaaacgcacagaaatgacagttttagtccaaccacc 14654361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 25534890 - 25535067
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcct-taaactatatgttttt 253  Q
    |||||||||||||||||||||||  |||||||||||| ||| ||||||||||||| || |||||||||||||||||||||||  |||| |||||||||||    
T  25534890 ggcttaattacacttttggtcctcgcattttgaccaattcatgaaaatggtcctacctcttttaaatcgaacaaaatcgtcccctaaattatatgttttt 25534989  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||| |||||||| |||||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  25534990 tgcagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgct 25535067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 153 - 293
Target Start/End: Original strand, 329844 - 329984
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 252  Q
    ||||| |||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  329844 ttggcataattacacttttggttcttccattttgaccaactcacgaaaatggtcctaacttttttaaatcgaacaaaatcgtccttaaactatatgtttt 329943  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaa 293  Q
    ||||| |||||||| ||||||||| ||||||||||||||||    
T  329944 ttgcagttttagtcctatctccctgtttccaactccataaa 329984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 46013422 - 46013598
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||| ||||| || || ||||||||||||||||||||||| |||| ||||||||||||    
T  46013422 ggcttaattacacttttgatccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaagtatatgtttttt 46013521  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||||||||||||||||| |||||||| ||||||||| |||| ||  ||||||||||||||||||||||    
T  46013522 gcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacggttttagtccaaccacctatgct 46013598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 157 - 329
Target Start/End: Complemental strand, 52237361 - 52237189
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgc 256  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||| ||||||||||||||    
T  52237361 cttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaattatatgttttttgc 52237262  T
Q  257 aattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatg 329  Q
    | |||||||| |||||||||||||| ||||||  |||||||||||||| ||| |||||||| |||||| ||||    
T  52237261 agttttagtcctatctccctatttctaactccggaaacgcacagaaatgacagttttagtcaaaccacatatg 52237189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 155 - 329
Target Start/End: Original strand, 2044271 - 2044445
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    ||||||||| |||||||||| ||  |||||||||||||||| |||||||||| || || ||||||||||||||||||||||| |||| ||||||||||||    
T  2044271 ggcttaatttcacttttggttctcgcattttgaccaactcatgaaaatggtcatacctcttttaaatcgaacaaaatcgtccataaattatatgtttttt 2044370  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatg 329  Q
    | | ||||||||||||||||||||||||||||| | ||||||||| |||||||| ||||||||||||||||||||    
T  2044371 ggagttttagtcatatctccctatttccaactcaagaaacgcacataaataacagttttagtccaaccacctatg 2044445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 157 - 331
Target Start/End: Original strand, 52236818 - 52236992
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgc 256  Q
    ||||||||||||||| |||||  |||||||| ||| |||||||||||||| || || ||||||||||||||||||||||| |||||||||||||||||||    
T  52236818 cttaattacacttttagtcctcgcattttgaacaattcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgc 52236917  T
Q  257 aattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    | ||||||||||||| |||||||| |||||||| |||||||||||||| ||| ||||||||||| ||||||||||    
T  52236918 agttttagtcatatccccctattttcaactccagaaacgcacagaaatgacagttttagtccaatcacctatgct 52236992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 154 - 331
Target Start/End: Original strand, 40275092 - 40275271
Alignment:
Q  154 tggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg--ttt 251  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||| || |||||||||||||||||| |||| |||||| ||||  |||    
T  40275092 tggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaattgtccctaaactctatgttttt 40275191  T
Q  252 tttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||||| |||||||| ||||||| |||||| ||||||| |||||||||||||| ||| ||||||||||||||| ||||||    
T  40275192 tttgcagttttagtcctatctccatatttctaactccagaaacgcacagaaatgacagttttagtccaaccacatatgct 40275271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 49720371 - 49720547
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |||| |||| |||||||    
T  49720371 ggcttaattacacttttgatccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaagtatacgtttttt 49720470  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||| ||||||| |||||| ||||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  49720471 gcagttttagtcctatctccttatttctaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 49720547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 157 - 331
Target Start/End: Original strand, 30513724 - 30513898
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt-tg 255  Q
    |||||||||| ||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||    
T  30513724 cttaattacatttttggtccttgcattttgacaaactcacgaaaatggtcctatcttttttaaatcgaataaaatcgt-cttaaactatatgtttttctg 30513822  T
Q  256 caattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    || |||||||||||||||| |||||| |||| || |||||||||||||| ||| |||||||||| |||||||||||    
T  30513823 cagttttagtcatatctccatatttcgaacttcagaaacgcacagaaatgacagttttagtccagccacctatgct 30513898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 155 - 329
Target Start/End: Original strand, 51472855 - 51473029
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||| ||||||||||||  |||||||||||||||| |||| |  ||||| || ||||||||| |||||||| |||| |||| ||||||||||||    
T  51472855 ggcttaattatacttttggtccttgcattttgaccaactcatgaaatttttcctacctcttttaaatcaaacaaaattgtccctaaagtatatgtttttt 51472954  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatg 329  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  51472955 gcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatg 51473029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 51828539 - 51828716
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 253  Q
    |||||||||||||||||||||||  |||||||||||| | |||||| ||||| || || ||||||||||||||||||||||| ||||||||||| |||||    
T  51828539 ggcttaattacacttttggtccttgcattttgaccaaattacgaaattggtcttacctcttttaaatcgaacaaaatcgtccgtaaactatatgtttttt 51828638  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||| |||||||| |||||||||||||||||||||| ||||||||| |||| ||| |||||||||||||| |||||||    
T  51828639 tgcagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccatctatgct 51828716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 158 - 316
Target Start/End: Original strand, 22370599 - 22370758
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttttgc 256  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| ||||||||||| ||||||||    
T  22370599 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaaccaaacaaaatcgtccctaaactatatgtttttttgc 22370698  T
Q  257 aattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagt 316  Q
    | |||||||| ||||||| ||| |||||||||| |||||||||||||||||| |||||||    
T  22370699 agttttagtcctatctccttatctccaactccagaaacgcacagaaataacagttttagt 22370758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 155 - 329
Target Start/End: Complemental strand, 38535841 - 38535667
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||| |||||||||||   |||||||||||||| |||||| | |||| |||| |||||||||||| |||||||||| |||||||||||||||||    
T  38535841 ggcttaattatacttttggtccgtgcattttgaccaacttacgaaattagtccgatctcttttaaatcgaataaaatcgtccctaaactatatgtttttt 38535742  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatg 329  Q
    ||| |||||||| |||||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||| ||||    
T  38535741 gcagttttagtcctatctccctatttccaactccagaaacgcacataaattacagttttagtccaaccacatatg 38535667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 154 - 328
Target Start/End: Complemental strand, 43678831 - 43678657
Alignment:
Q  154 tggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 253  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||  |||||| | || ||||||||||||||||||||||| ||||||||||||||||    
T  43678831 tggcttaattacacttttggtccttgcattttgatcaactcacgaacttggtccaacctcttttaaatcgaacaaaatcgtccataaactatatgttttt 43678732  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctat 328  Q
    |||| ||| |||||||||| |||||||||||||| | ||||||||| |||| ||| ||||||| |||||||||||    
T  43678731 tgcagtttcagtcatatcttcctatttccaactctagaaacgcacataaatgacagttttagttcaaccacctat 43678657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 153 - 331
Target Start/End: Original strand, 52375325 - 52375503
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 252  Q
    |||||||||||||||||||||||||  |||||| ||||| |||||||||||||| || || |||||||| |||||||||||||| |||||||||||||||    
T  52375325 ttggcttaattacacttttggtcctcacattttaaccaattcacgaaaatggtcatacctcttttaaattgaacaaaatcgtccctaaactatatgtttt 52375424  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||| |||||||  |||||||||||||| ||||||| ||||||| |||||| ||| |||||||| |||||| ||||||    
T  52375425 ttgcagttttagttctatctccctatttctaactccagaaacgcatagaaatgacagttttagtctaaccacatatgct 52375503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 14654735 - 14654561
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| |||  ||| || ||||||||||||||||||||||| |||||  ||||||||||    
T  14654735 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggctctacctcttttaaatcgaacaaaatcgtccgtaaac--tatgtttttt 14654638  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||| ||||||| |||||||||||||| ||||||||| |||| ||| ||||||| |||||| |||||||    
T  14654637 gcagttttagtcctatctccttatttccaactccagaaacgcacataaatgacagttttagttcaaccatctatgct 14654561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 158 - 331
Target Start/End: Original strand, 32730392 - 32730565
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 257  Q
    ||||||||||||||||||||  |||||||||||||||  |||| |||||||| || |||||||| |||||||||||||| ||||||||||||||||||||    
T  32730392 ttaattacacttttggtccttgcattttgaccaactcttgaaattggtcctacctcttttaaattgaacaaaatcgtccctaaactatatgttttttgca 32730491  T
Q  258 attttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
     ||||| || |||||||||||||||||||| | ||||||||| |||| ||| ||||||| ||| ||||||||||    
T  32730492 gttttaatcgtatctccctatttccaactctagaaacgcacataaatgacagttttagttcaatcacctatgct 32730565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 153 - 319
Target Start/End: Original strand, 44676470 - 44676636
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 252  Q
    |||||||||||||||||||||||||  ||||||||| |||||| |||| || || || || ||||||||||||||||| ||||| |||||||||||||||    
T  44676470 ttggcttaattacacttttggtccttgcattttgacaaactcatgaaattgatcatacctcttttaaatcgaacaaaaccgtccctaaactatatgtttt 44676569  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtcca 319  Q
    |||||  ||||||| |||||||||||||||||||| | |||||||||||||| ||| ||||||||||    
T  44676570 ttgcagctttagtcctatctccctatttccaactcaagaaacgcacagaaatgacagttttagtcca 44676636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 161 - 331
Target Start/End: Complemental strand, 34105190 - 34105018
Alignment:
Q  161 attacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt--ttttgcaa 258  Q
    |||||||||||||||||  |||||||||||||| |||||  |||||||  || ||||||||||||||||||||||| |||||||||||||  |||||||     
T  34105190 attacacttttggtccttgcattttgaccaacttacgaagttggtcctccctcttttaaatcgaacaaaatcgtccctaaactatatgttttttttgcag 34105091  T
Q  259 ttttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||||||  |||||| ||||||||||| || |||||||||||||| ||| ||||||||||||||||||||||    
T  34105090 ttttagtcccatctccttatttccaacttcagaaacgcacagaaatgacagttttagtccaaccacctatgct 34105018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 149 - 289
Target Start/End: Original strand, 16689352 - 16689492
Alignment:
Q  149 aaaattggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 248  Q
    ||||| || ||||||||| ||||||||||| ||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |||| ||||||    
T  16689352 aaaataggtttaattacagttttggtcctagcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccataaaatatatg 16689451  T
Q  249 ttttttgcaattttagtcatatctccctatttccaactcca 289  Q
    ||||||||| |||||||| |||| |||||||||| ||||||    
T  16689452 ttttttgcagttttagtcctatcaccctatttccgactcca 16689492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 39010075 - 39010250
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||| ||||||||||  ||||||||||||||||| ||| || || || || |||||||||||||||||| || |||||||| ||||||||||    
T  39010075 ggcttaattacatttttggtccttgcattttgaccaactcacaaaattgctcatacctcttttaaatcgaacaaaattgttcttaaactgtatgtttttt 39010174  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| ||||||||| |||||||||||| |||||||||||| ||||| |||| | | ||||||||||||||| ||||||    
T  39010175 gcagttttagtcacatctccctattttcaactccataaa-gcacataaatgatagttttagtccaaccacatatgct 39010250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 153 - 331
Target Start/End: Original strand, 43222388 - 43222566
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 252  Q
    |||||||||||||  |||||||| |  ||||||||||||||||||||||| ||  | ||| ||||||||||||||||||||||| |||||||||||||||    
T  43222388 ttggcttaattacgtttttggtcatcacattttgaccaactcacgaaaatagttatgtctcttttaaatcgaacaaaatcgtccctaaactatatgtttt 43222487  T
Q  253 ttgcaattttagtcatatctcccta-tttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||| ||||| || || | ||||| ||| |||||||| ||||| ||| |||| ||| ||||||||||||||||||||||    
T  43222488 ttgcatttttaatccta-ccccctatttttcaactccagaaacgtacaaaaatgacagttttagtccaaccacctatgct 43222566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 49407796 - 49407971
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||||||| |  || ||| |||| |||||||| ||||| |||||| |||||||| |    
T  49407796 ggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaaccgtccctaaactttatgttttgt 49407895  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
     || ||||||||||| || ||||||| |||||||| ||||||| |||||| |||||||||| || ||| ||||||||    
T  49407896 acagttttagtcatacct-cctattttcaactccaaaaacgcagagaaatgacaattttagacctaccccctatgct 49407971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 157 - 304
Target Start/End: Complemental strand, 36701640 - 36701493
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttg 255  Q
    |||||||||||||||||||||  ||||||||||| ||||||||||||||| | ||| ||| ||||||||||||||| ||| |||||||| ||||||||||    
T  36701640 cttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaatcatccctaaactatcatgttttttg 36701541  T
Q  256 caattttagtcatatctccctatttccaactccataaacgcacagaaat 304  Q
    || ||||||||||| || ||||||| |||||||| |||| || ||||||    
T  36701540 cagttttagtcatacct-cctattttcaactccagaaacacatagaaat 36701493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 155 - 287
Target Start/End: Complemental strand, 41998774 - 41998643
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 253  Q
    |||||||||||||||||||||||  |||||||||||||| |||||| |||||||| || ||||||||||||||||||||||| | ||||||||| |||||    
T  41998774 ggcttaattacacttttggtccttgcattttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtccct-aactatatgtttttt 41998676  T
Q  254 tgcaattttagtcatatctccctatttccaactc 287  Q
    |||| |||||||| || |||||||||| ||||||    
T  41998675 tgcagttttagtccta-ctccctattttcaactc 41998643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 155 - 304
Target Start/End: Complemental strand, 50901073 - 50900925
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||||||||  ||||||||||| ||||| ||||||| |||  || ||  ||||||||||||| ||||| |||||||||||||||||    
T  50901073 ggcttaattacacttttggtcctcgcattttgaccagctcacaaaaatggccctgcctcttacaaatcgaacaaaaccgtccctaaactatatgtttttt 50900974  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaat 304  Q
    ||| |||| ||| || || ||||||| |||||||||||||||| ||||||    
T  50900973 gcagtttttgtcctacct-cctattttcaactccataaacgcaaagaaat 50900925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 155 - 304
Target Start/End: Complemental strand, 27200237 - 27200089
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 253  Q
    |||||||||||||||||||||||  ||||||||||| |||||||||||||| ||  || ||| ||||||||||| | ||||| |||||||| ||||||||    
T  27200237 ggcttaattacacttttggtccttgcattttgaccagctcacgaaaatggttctgcctctttcaaatcgaacaataccgtcc-taaactatcatgttttt 27200139  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaat 304  Q
    |||| ||||||||||| || ||||||| |||||||| ||||||| ||||||    
T  27200138 tgcagttttagtcatacct-cctattttcaactccagaaacgcagagaaat 27200089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 153 - 331
Target Start/End: Original strand, 55192116 - 55192293
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 252  Q
    ||||||||||||||||||| ||||   ||||||||||| |||||||||||||||    || ||| ||||| ||||||| ||||| |||||||||||||||    
T  55192116 ttggcttaattacacttttagtccccgcattttgaccagctcacgaaaatggtctcgcctctttcaaatcaaacaaaaccgtccataaactatatgtttt 55192215  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| | |||||||| || || ||||||| |||||||| ||||||| |||||| ||| |||||| || ||| ||||||||    
T  55192216 ttgtagttttagtcctacct-cctattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgct 55192293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 156 - 325
Target Start/End: Complemental strand, 43222935 - 43222765
Alignment:
Q  156 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-tttttt 254  Q
    ||||||| ||||||||||||||  ||||||||| | | ||||||||||||| |  || ||||||||||||||||||||||| |||||| |||| ||||||    
T  43222935 gcttaatcacacttttggtcctcgcattttgacaagcgcacgaaaatggtcatgcctcttttaaatcgaacaaaatcgtccctaaactttatgttttttt 43222836  T
Q  255 gcaattttagtcatatctcccta-tttccaactccataaacgcacagaaataacaattttagtccaaccacc 325  Q
    ||| ||||||||  | | ||||| ||| |||||||| ||||||||| |||| ||| ||||||||||||||||    
T  43222835 gcagttttagtccca-ccccctatttttcaactccagaaacgcacaaaaatgacagttttagtccaaccacc 43222765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 168 - 254
Target Start/End: Complemental strand, 39010554 - 39010468
Alignment:
Q  168 ttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    ||||| |||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |  ||||||||||    
T  39010554 ttttgatcctgccattttgaccagctcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaatccgtatgtttttt 39010468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 156 - 331
Target Start/End: Original strand, 37075687 - 37075864
Alignment:
Q  156 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg---tttt 252  Q
    ||||||||||||||||||||    |||||||||||||||||||||||||||||  || ||| ||||| ||||||  ||||| |||||||||||   ||||    
T  37075687 gcttaattacacttttggtctccgcattttgaccaactcacgaaaatggtcctgcctctttcaaatcaaacaaacccgtccctaaactatatgttttttt 37075786  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||| |||||||| || || | ||||| |||||||| ||||||| |||||| ||  |||||| || ||| ||||||||    
T  37075787 ttgcagttttagtcctacct-cttattttcaactccagaaacgcagagaaatgaccgttttagacctaccccctatgct 37075864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 254
Target Start/End: Original strand, 36701106 - 36701206
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 253  Q
    |||||||||||||||||||||||  |||||||| ||||||||||||||| || |  || ||| ||||||||||||||||||| |||||||| ||||||||    
T  36701106 ggcttaattacacttttggtcctcgcattttgatcaactcacgaaaatgatcatgcctctttcaaatcgaacaaaatcgtccataaactatcatgttttt 36701205  T
Q  254 t 254  Q
    |    
T  36701206 t 36701206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 155 - 246
Target Start/End: Complemental strand, 33412700 - 33412609
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactata 246  Q
    |||||||||||||||||||||||  |||||||| || |||||||||||||| || ||| |||  |||||||||||||||||| |||||||||    
T  33412700 ggcttaattacacttttggtcctcgcattttgatcagctcacgaaaatggttctgtctctttcgaatcgaacaaaatcgtccctaaactata 33412609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 331
Target Start/End: Original strand, 27199705 - 27199878
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttttgc 256  Q
    ||||||||| ||||||||||  ||||||||||| ||||||||||||||| |  || ||| ||||||||||||| ||||  ||||||||||| ||||||||    
T  27199705 ttaattacatttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtcactaaactatatgtttttttgc 27199804  T
Q  257 aattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    | |||||||  || |  ||||||| |||||| | ||||||| | ||||| || |||||| || ||| ||||||||    
T  27199805 agttttagtgcta-catcctattttcaactctagaaacgcagataaatatcagttttagacctaccccctatgct 27199878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 266
Target Start/End: Complemental strand, 37076219 - 37076109
Alignment:
Q  156 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 254  Q
    ||||||||||| ||||||||||  |||||||| || ||||||||||||||||   || ||| ||||||||||||||||||| |||||||| |||||||||    
T  37076219 gcttaattacatttttggtcctcgcattttgatcagctcacgaaaatggtcccgcctctttcaaatcgaacaaaatcgtcc-taaactatcatgtttttt 37076121  T
Q  255 gcaattttagtc 266  Q
     || ||||||||    
T  37076120 acatttttagtc 37076109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 304
Target Start/End: Complemental strand, 49408326 - 49408180
Alignment:
Q  156 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atg-ttttt 253  Q
    ||||||||||||||||||| ||  ||||||||||| ||||||||||||||  | ||| ||| |||||||||||||  |||| |||||||| ||| |||||    
T  49408326 gcttaattacacttttggtactcgcattttgaccatctcacgaaaatggttgtgtctctttcaaatcgaacaaaactgtcc-taaactatcatgtttttt 49408228  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaat 304  Q
    |||| |||||||| || |||   |||| |||||||| ||||||| ||||||    
T  49408227 tgcagttttagtcctacctc---attttcaactccagaaacgcaaagaaat 49408180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 153 - 254
Target Start/End: Complemental strand, 8874234 - 8874133
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 252  Q
    |||| ||||||||||||||  |||   | ||||||||| |||||||||||||||||   | ||||||||||||||||| | ||| |||||||||||||||    
T  8874234 ttggtttaattacacttttcatccccgcgttttgaccagctcacgaaaatggtcctgcttcttttaaatcgaacaaaaccttccctaaactatatgtttt 8874135  T
Q  253 tt 254  Q
    ||    
T  8874134 tt 8874133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 151 - 263
Target Start/End: Complemental strand, 12141241 - 12141128
Alignment:
Q  151 aattggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgt 249  Q
    |||||||||||||||||||||| ||||  |||||| | ||  ||||| ||||||||||| || ||| ||||||||||||| | ||  |||||||| ||||    
T  12141241 aattggcttaattacacttttgttcctcgcatttttatcagatcacgtaaatggtcctacctctttcaaatcgaacaaaaccatctctaaactatcatgt 12141142  T
Q  250 tttttgcaatttta 263  Q
    |||||||| |||||    
T  12141141 tttttgcagtttta 12141128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 266
Target Start/End: Original strand, 50900534 - 50900644
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt- 254  Q
    |||||||| |||||||||| |   ||||||| || |||||||||||||||||| || ||| ||||||||||||| ||||| |||||||| |||||||||     
T  50900534 cttaattaaacttttggtcttcaaattttgatcagctcacgaaaatggtcctaactctttcaaatcgaacaaaaccgtcc-taaactatcatgttttttc 50900632  T
Q  255 gcaattttagtc 266  Q
    ||| ||||||||    
T  50900633 gcagttttagtc 50900644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 315
Target Start/End: Complemental strand, 5137526 - 5137365
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 253  Q
    |||||||||||||||||||||||    ||||| || ||||| |||| |||| ||  | |||| |||| ||||||||| |||||| || ||| || ||| |    
T  5137526 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 5137427  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttag 315  Q
    |||| |||||||| |||||||   |||| ||||||| ||||||| |||||| ||| ||||||    
T  5137426 tgcatttttagtcctatctcctattttcaaactccagaaacgcagagaaatgacagttttag 5137365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 315
Target Start/End: Original strand, 8873694 - 8873850
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atg-ttttttg 255  Q
    ||||||||| ||||||||||  |||||||| ||  | |||||||||||| | ||| ||||||||||||||||| ||| | ||| |||| ||| |||||||    
T  8873694 ttaattaca-ttttggtcctcgcattttgatcagtttacgaaaatggtcatgtctcttttaaatcgaacaaaaccgt-cataacctatcatgtttttttg 8873791  T
Q  256 caattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttag 315  Q
    || |||||||| || || ||||||| ||||| || ||||||| |||||| ||| ||||||    
T  8873792 cagttttagtcttacct-cctattttcaacttcagaaacgcagagaaatgacagttttag 8873850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 294
Target Start/End: Original strand, 2323382 - 2323517
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 256  Q
    ||||||||| |||| |||||  |||||||||||  |||| |||||  | ||  || ||| ||||||||||||| | |||| ||||||| |||||||||||    
T  2323382 ttaattacattttttgtcctcgcattttgaccagttcacaaaaattatactgcctctttcaaatcgaacaaaaccatcct-aaactatcatgttttttgc 2323480  T
Q  257 aattttagtcatatctccctatttccaactccataaac 294  Q
    |||||||||| || || ||||||| |||||||| ||||    
T  2323481 aattttagtcctacct-cctattttcaactccagaaac 2323517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 315
Target Start/End: Complemental strand, 37847328 - 37847206
Alignment:
Q  192 ctcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcaattttagtcatatctccctatttccaactccat 290  Q
    |||| |||||||||| |  || ||| ||||||||||||  ||||| |||||||| ||| |||||||| |||||||| ||||| ||||||| ||||| ||     
T  37847328 ctcaggaaaatggtcttgcctctttcaaatcgaacaaagccgtccctaaactatcatg-tttttgcagttttagtcctatct-cctattttcaacttcag 37847231  T
Q  291 aaacgcacagaaataacaattttag 315  Q
    ||| ||| |||||| ||||||||||    
T  37847230 aaatgcagagaaatgacaattttag 37847206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 20840560 - 20840635
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 230  Q
    |||||||||||||||||||||||    ||||| || |||||||||| |||||||  |||||| |||| ||||||||    
T  20840560 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaa 20840635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 304
Target Start/End: Complemental strand, 20841106 - 20840956
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 253  Q
    |||||||||||||||||||| ||    ||||| || |||||||||| |||||||  |||||| |||  ||||||||  |||||| || ||| || ||| |    
T  20841106 ggcttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgt 20841007  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaat 304  Q
    |||| |||| ||| || ||||   |||| ||||||||||||||| ||||||    
T  20841006 tgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaat 20840956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 23644462 - 23644515
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcct 208  Q
    |||||||||||||||||||||||   |||||| || |||||||||| |||||||    
T  23644462 ggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcct 23644515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 30104482 - 30104535
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcct 208  Q
    |||||||||||||||||||||||    |||||||| |||||||||| |||||||    
T  30104482 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcct 30104535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 39556124 - 39556039
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctt 238  Q
    |||||||||||||||||||||||||    ||||| || |||||||||| |||||||  | |||| |||  ||||||||| ||||||    
T  39556124 ttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtcctt 39556039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 25612519 - 25612447
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 230  Q
    ||||||||||||||||||||    |||||||| |||||||||| |||||||  | |||| |||| ||||||||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaa 25612447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 157; Significance: 2e-83; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 7733033 - 7732857
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7733033 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 7732934  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  7732933 gcaattttagtcctatctccctattttcaactccataaatgcacagaaataacaattctagtccaaccacctatgct 7732857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 152 - 331
Target Start/End: Original strand, 9181529 - 9181708
Alignment:
Q  152 attggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttt 251  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  9181529 attgccttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatattttt 9181628  T
Q  252 tttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||||| |||||||| |||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  9181629 tttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 9181708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 158 - 331
Target Start/End: Complemental strand, 25637741 - 25637568
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25637741 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 25637642  T
Q  258 attttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
     |||||||| |||||||||||||||||||||| |||| ||||||||| ||| ||||||||||||||||||||||    
T  25637641 gttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttagtccaaccacctatgct 25637568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 48248138 - 48247961
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-ttt 253  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  48248138 ggcttaattacacttttggtcctaccattttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 48248039  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||| ||||||||  ||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  48248038 tgcagttttagtcccatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 48247961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 157 - 331
Target Start/End: Complemental strand, 27245748 - 27245574
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgc 256  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  27245748 cttaattatacttttggtcttaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaattatatgtattttgc 27245649  T
Q  257 aattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| | | ||||||||||||||||||||||    
T  27245648 aattttagtcatatctccctatttccaactccagaaacgcacagaaatcatagttttagtccaaccacctatgct 27245574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 156 - 331
Target Start/End: Original strand, 15712366 - 15712541
Alignment:
Q  156 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttg 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15712366 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatattttttg 15712465  T
Q  256 caattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
     | |||||||| |||||||||||||||||||| | ||||||||| |||| ||| ||||||||||||||| ||||||    
T  15712466 tagttttagtcctatctccctatttccaactctagaaacgcacataaatgacagttttagtccaaccacatatgct 15712541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 158 - 329
Target Start/End: Complemental strand, 14311830 - 14311659
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 257  Q
    |||||||||||||| ||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14311830 ttaattacactttttgtcgtaccaatttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactatatgttttttgca 14311731  T
Q  258 attttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatg 329  Q
     |||||||| |||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||    
T  14311730 gttttagtcttatctccctatttccaactctagaaacgcacagaaatgacaattttagtccaaccacctatg 14311659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 158 - 331
Target Start/End: Original strand, 5745642 - 5745815
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 257  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  5745642 ttaattacacttttggtcctatcattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatctttcttaaactatatgttttttgca 5745741  T
Q  258 attttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
     |||||||| ||||||||||||||| |||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  5745742 gttttagtcttatctccctatttcctactccagaaacgcacataaatgacagttttagtccaaccacctatgct 5745815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 7732488 - 7732664
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||| ||||||||||  |||||||| |||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  7732488 ggcttaattacatttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaactatatgtttttt 7732587  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||| ||||||||||||| |||||||||||||||||| |||| ||| ||||||||||||||||||||||    
T  7732588 gcagttttagtcctatctccctattttcaactccataaacgcacataaatgacagttttagtccaaccacctatgct 7732664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 16081299 - 16081475
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    ||||||||||||||||||||||| | ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16081299 ggcttaattacacttttggtccttctattttgaccaactcatggaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatttgtttttt 16081398  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||| ||||| |||||||||||||||| |||| ||||||||| ||| ||||||||||||||| ||||||    
T  16081399 gcagttttagtcctatctacctatttccaactccaaaaacacacagaaatgacagttttagtccaaccacatatgct 16081475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 158 - 331
Target Start/End: Complemental strand, 26026861 - 26026688
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 257  Q
    |||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||    
T  26026861 ttaattacacttttggtcctactattttgacaaattcacgaaaatggtcctatcttttataaatcgaacaaaaccatccttaaactatatgttttttgca 26026762  T
Q  258 attttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
     |||||||  |||||||||||||||||||||| ||||||| |||||| ||| ||||||||||||||||||||||    
T  26026761 gttttagttttatctccctatttccaactccaaaaacgcatagaaatgacagttttagtccaaccacctatgct 26026688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 155 - 329
Target Start/End: Original strand, 786782 - 786957
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 253  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||| || |||||||||||||||||||||  ||||||||||||||| |||||    
T  786782 ggcttaattacacttttgatccttccattttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaattttccttaaactatatgtttttt 786881  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatg 329  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||| | ||| ||||||| ||||||||||||    
T  786882 tgcagttttagtcctatctccctatttccaactccataaacgcacagaagtgacagttttagttcaaccacctatg 786957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 11971334 - 11971514
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11971334 ggcttaattatacttttggtcctaccattttgacctactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 11971433  T
Q  255 g----caattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
         || |||||||| ||||||||||||||||| || | |||| |||| |||| ||| ||||||||||||||||||||||    
T  11971434 ttttacagttttagtcctatctccctatttccaattctagaaacacacataaatgacagttttagtccaaccacctatgct 11971514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 153 - 331
Target Start/End: Original strand, 27245201 - 27245380
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttt 251  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||  |||| ||||| |||    
T  27245201 ttggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccccaaaccatatgtttt 27245300  T
Q  252 tttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||||| |||||||| ||||||| |||||||||||||| |||||||||||||| | | ||||||||||||||||||||||    
T  27245301 tttgcagttttagtcctatctccttatttccaactccagaaacgcacagaaatgatagttttagtccaaccacctatgct 27245380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 155 - 329
Target Start/End: Complemental strand, 16081845 - 16081671
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    ||||||||||||| |||||||||  ||||||||||||||||||||| || ||||| || ||||||||||||||||||| ||| |||||||||||||||||    
T  16081845 ggcttaattacacctttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcatccctaaactatatgtttttt 16081746  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatg 329  Q
    ||| |||||||| |||||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||| ||||    
T  16081745 gcagttttagtcctatctccctatttccaactccaaaaacgcacaaaaatgacagttttagtccaaccacttatg 16081671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 158 - 331
Target Start/End: Complemental strand, 28688041 - 28687869
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 257  Q
    ||||||||| ||||||||||  ||||||||||||||||||||| || || || || ||||||||||||||||||||||| ||||||||||||||||||||    
T  28688041 ttaattaca-ttttggtccttgcattttgaccaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgca 28687943  T
Q  258 attttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
     |||||||| ||||| |||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  28687942 cttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 28687869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 155 - 275
Target Start/End: Original strand, 16917713 - 16917833
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  16917713 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtttttt 16917812  T
Q  255 gcaattttagtcatatctccc 275  Q
    ||| |||||||||||||||||    
T  16917813 gcagttttagtcatatctccc 16917833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 154 - 329
Target Start/End: Complemental strand, 26048493 - 26048319
Alignment:
Q  154 tggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 253  Q
    ||||||||||||||||||| ||||  | ||||||||||||||||||| |||||||| || ||||||||| |||||||| ||||||||||||||||| |||    
T  26048493 tggcttaattacacttttgttccttgcgttttgaccaactcacgaaattggtcctacctcttttaaatcaaacaaaattgtccttaaactatatgt-ttt 26048395  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatg 329  Q
    |||| ||||||||||||||||||||||||||||||| ||| ||||| |||| ||| ||||||||||||||||||||    
T  26048394 tgcagttttagtcatatctccctatttccaactccaaaaatgcacataaatgacagttttagtccaaccacctatg 26048319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 153 - 304
Target Start/End: Original strand, 28687591 - 28687742
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 252  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||    
T  28687591 ttggcttaattacacttttggtcatatcattttgaccaactcacgaaaatggttctatcttttataaatcgaacaaaatcgtccttaaactatatttttt 28687690  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaat 304  Q
    ||||| || ||||| ||||| |||||||||||||||| ||||||||| ||||    
T  28687691 ttgcagttctagtcctatcttcctatttccaactccagaaacgcacataaat 28687742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 48247587 - 48247767
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||||||||  |||||||| |||||||||||| |||||||| || ||||||||| ||||||||||||| |||| ||||| ||||||    
T  48247587 ggcttaattacacttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaagtatatatttttt 48247686  T
Q  255 ----gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
        ||| ||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  48247687 ttttgcagttttagtcatatctccctatttccaactccaaaaacgcacagaaatgacagttttagtccaaccacctatgct 48247767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 2758244 - 2758068
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||||||||  |||||||  ||||||||||||||||| ||| || ||||||||||||||||||||||| |||||||||||||||||    
T  2758244 ggcttaattacacttttggtcctcgcattttgttcaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactatatgtttttt 2758145  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||  |||||||||||| ||||||||| ||||||| ||||||| | |||| ||| ||||||||||||||| ||||||    
T  2758144 gcaggtttagtcatatccccctatttctaactccagaaacgcatataaatgacagttttagtccaaccacttatgct 2758068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 161 - 331
Target Start/End: Complemental strand, 35161342 - 35161171
Alignment:
Q  161 attacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-ttttgcaat 259  Q
    |||||||||||||||||  |||||||||||||||||| || |||||||| || ||||||||||||||||||||||| ||||||||||||| ||||||| |    
T  35161342 attacacttttggtccttgcattttgaccaactcacggaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgcagt 35161243  T
Q  260 tttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||||||||||||||||||||||||||||||||||||||| |||| | | |||| | || ||||||||||||    
T  35161242 tttagtcatatctccctatttccaactccataaacgcacataaatgatagttttgggccgaccacctatgct 35161171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 25637197 - 25637374
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 253  Q
    |||||||||||||||||||||||  ||| |||||||||||| |||| |||||||| || ||||||||||||||||||||||| ||||||||||| |||||    
T  25637197 ggcttaattacacttttggtccttgcatattgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 25637296  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    || | |||||||| |||||||||||||||||||||| ||||||||| |||| ||| |||||  |||||||||||||||    
T  25637297 tgtagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttaagccaaccacctatgct 25637374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 155 - 332
Target Start/End: Complemental strand, 5746186 - 5746008
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||| || || |  || ||||||||||||||||| ||||| |||||||||||||||||    
T  5746186 ggcttaattacacttttggtccttgcattttgactaactcacgaaattgatc-tgcctcttttaaatcgaacaaaaccgtccataaactatatgtttttt 5746088  T
Q  255 --gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgctt 332  Q
      |||||||||||| |||||||||||||||||||||||||||||||| |||| ||| ||||||||||| |||||||||||    
T  5746087 ttgcaattttagtcttatctccctatttccaactccataaacgcacataaatgacagttttagtccaatcacctatgctt 5746008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 153 - 331
Target Start/End: Complemental strand, 24929856 - 24929673
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgt--- 249  Q
    |||||||||||||| ||||||||||  ||||||||||||||||||||| ||||| || || ||||||||| ||||||||||||| |||||||||| |       
T  24929856 ttggcttaattacatttttggtccttgcattttgaccaactcacgaaattggtcttacctcttttaaatcaaacaaaatcgtccctaaactatatatatt 24929757  T
Q  250 --tttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
      |||||||| |||||||| |||||||||||||||||||||| |||||||||||||| ||| |||||||||||| |||||||||    
T  24929756 tttttttgcagttttagtcctatctccctatttccaactccaaaaacgcacagaaatgacagttttagtccaacgacctatgct 24929673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 158 - 331
Target Start/End: Original strand, 26026320 - 26026494
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttttgc 256  Q
    ||||||||||||||||||||   |||||||||| ||||||||| ||||| || || ||||||||||||||||||||||| ||||||||||| ||||||||    
T  26026320 ttaattacacttttggtccttgtattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccataaactatatgtttttttgc 26026419  T
Q  257 aattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    | |||||||| ||||||||||||| |||||||| |||||||||||||| ||| ||||||| ||||||| ||||||    
T  26026420 agttttagtcttatctccctattttcaactccagaaacgcacagaaatgacagttttagttcaaccacatatgct 26026494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 9181958 - 9181779
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt---t 251  Q
    |||||||||||||||||| ||||  |||||||||||| |||||||| || || || || ||||||||||||||||||||||| |||||||||||||   |    
T  9181958 ggcttaattacacttttgatccttgcattttgaccaattcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 9181859  T
Q  252 tttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| || |||||||| |||||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  9181858 tttccagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgct 9181779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 156 - 331
Target Start/End: Complemental strand, 39388813 - 39388636
Alignment:
Q  156 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-tttt 254  Q
    ||||||||||||||||||||||  ||||||||||||||||||||| | |||||| || ||||||||||||||||||||||  ||||||||||||| ||||    
T  39388813 gcttaattacacttttggtccttgcattttgaccaactcacgaaatttgtcctacctcttttaaatcgaacaaaatcgtctctaaactatatgttttttt 39388714  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcac-agaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||| ||||||||||||| |||||||| |||||||| | |||| ||| ||||||||||||||| ||||||    
T  39388713 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaaatgacagttttagtccaaccacatatgct 39388636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 5333880 - 5334014
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||||||||| || || ||||||||||||||||||||||| |||||||||||||||||    
T  5333880 ggcttaattacacttttgatccttgcattttgaccaactcacgaaaatggtcgtacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 5333979  T
Q  255 gcaattttagtcatatctccctatttccaactcca 289  Q
    ||| ||||||||||||| |||||||||| ||||||    
T  5333980 gcagttttagtcatatccccctatttcctactcca 5334014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 34595318 - 34595142
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 253  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||   | ||||||||||||||||||||||| |||||||| ||| ||||    
T  34595318 ggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctgcatcttttaaatcgaacaaaatcgtccctaaactatcatg-tttt 34595220  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||| |||||||  || | || ||||| |||||||| |||||||||||||| ||| |||||||||||||||| |||||    
T  34595219 tgcagttttagtgctacccccttattttcaactccagaaacgcacagaaatgacagttttagtccaaccacccatgct 34595142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 158 - 331
Target Start/End: Original strand, 26047960 - 26048124
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt-ttgc 256  Q
    ||||||||||||||| | ||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||| |||     
T  26047960 ttaattacacttttgattctaccatttcgaccaactcacgaaaatggtcatatcttttttaaatcgaataaaattgtccttaaactatatgttttgttg- 26048058  T
Q  257 aattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
             | ||| |||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  26048059 ---------cctatgtccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 26048124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 158 - 331
Target Start/End: Complemental strand, 11973945 - 11973772
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 257  Q
    ||||||||| ||||||||||  |||||||||||||  |||||| |||| ||| || |||||||| |||||||||||||| |||| || ||| ||||||||    
T  11973945 ttaattacatttttggtccttgcattttgaccaacgtacgaaattggttctacctcttttaaattgaacaaaatcgtccctaaattaaatggtttttgca 11973846  T
Q  258 attttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
     |||||||  ||||| ||||||||||||| || |||||||||||||| ||| ||||||||||||||||||||||    
T  11973845 gttttagttctatcttcctatttccaacttcagaaacgcacagaaatgacagttttagtccaaccacctatgct 11973772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 158 - 331
Target Start/End: Complemental strand, 787329 - 787152
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt---- 253  Q
    ||||||||||||||||| ||   ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| |||||||        
T  787329 ttaattacacttttggtgctcgtattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactatttgtttttaatt 787230  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    || | |||||||| ||||| | ||||| |||||||| ||||||||| |||| | | ||||||||||||||| ||||||    
T  787229 tgtagttttagtcttatcttcatattttcaactccagaaacgcacataaatgatagttttagtccaaccacatatgct 787152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 157 - 266
Target Start/End: Complemental strand, 5334363 - 5334254
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgc 256  Q
    |||||||||||||||||||||  ||||||||||||||||||||||| |||||| || ||||||||||||||||||||||| |||||||||| ||||||||    
T  5334363 cttaattacacttttggtcctcacattttgaccaactcacgaaaatagtcctacctcttttaaatcgaacaaaatcgtccctaaactatatattttttgc 5334264  T
Q  257 aattttagtc 266  Q
    | ||||||||    
T  5334263 agttttagtc 5334254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 156 - 315
Target Start/End: Complemental strand, 9394274 - 9394117
Alignment:
Q  156 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttg 255  Q
    |||||||||||||||||||| |  ||||||||||| ||||| |||||||||||| |||||| ||||||||||||| ||||| |||||||||| |||||||    
T  9394274 gcttaattacacttttggtc-tcgcattttgaccagctcacaaaaatggtcctacctttttcaaatcgaacaaaaccgtccctaaactatatattttttg 9394176  T
Q  256 caattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttag 315  Q
    || |||||||| ||||| ||||||||||||| || |||| || |||||| ||| ||||||    
T  9394175 cagttttagtcctatct-cctatttccaacttcaaaaacacaaagaaatgacagttttag 9394117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 157 - 331
Target Start/End: Original strand, 14311317 - 14311492
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttg- 255  Q
    |||||||| | ||||||| ||  |||||| |||||||||  ||| ||||  || || |||||||| ||| |||||||||| |||||||||||||||||      
T  14311317 cttaattatatttttggtacttgcattttaaccaactcataaaattggttatacctcttttaaattgaataaaatcgtccctaaactatatgttttttta 14311416  T
Q  256 caattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    || ||||| || ||||||||||||||||||||||||||| |||| |||| ||| ||||||||||||||||||||||    
T  14311417 cagttttaatcctatctccctatttccaactccataaacacacataaatgacagttttagtccaaccacctatgct 14311492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 35160660 - 35160746
Alignment:
Q  162 ttacacttttggtcctaccattttgaccaactcacgaaaatggtccta--tcttttttaaatcgaacaaaatcgtccttaaactata 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||  | ||||||||||||||| ||||||| |||||| ||||    
T  35160660 ttacacttttggtcctaccattttgaccaactcacgaaaatggtcatattttttttttaaatcgaactaaatcgttcttaaattata 35160746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 331
Target Start/End: Complemental strand, 35579430 - 35579256
Alignment:
Q  156 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 254  Q
    ||||||||||||||||| ||||  |||||||| || |||||||||||| |  |  || ||| ||||| ||||||| ||||| |||||||| |||||||||    
T  35579430 gcttaattacacttttgatcctcgcattttgatcagctcacgaaaatgattatgcctctttcaaatcaaacaaaaccgtcc-taaactatcatgtttttt 35579332  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| ||||||||||| || ||||||| |||||| | |||||||  ||||||||| |||||| || ||| ||||||||    
T  35579331 gcagttttagtcatacct-cctattttcaactctaaaaacgcagggaaataacagttttagacctaccccctatgct 35579256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 245
Target Start/End: Original strand, 39136686 - 39136776
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 245  Q
    |||||||||||||||||| ||||  ||||||||||| |||||||||||||| ||  || ||| ||||||||||||||||||| ||||||||    
T  39136686 ggcttaattacacttttgatccttgcattttgaccagctcacgaaaatggttctgactctttcaaatcgaacaaaatcgtccctaaactat 39136776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 297
Target Start/End: Original strand, 4477700 - 4477844
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttt 251  Q
    |||||||||||||||| ||| ||||  |||||||||||| |||||||||||||||   || |||||||| ||| |||||||||| |||||||| ||| ||    
T  4477700 ttggcttaattacactattgatccttacattttgaccaattcacgaaaatggtcccgcctcttttaaattgaataaaatcgtccctaaactatcatg-tt 4477798  T
Q  252 tttgcaattttagtcatatctccctatttccaactccataaacgca 297  Q
    |||||| |||||||| || ||||   |||| ||||||| |||||||    
T  4477799 tttgcagttttagtcctacctcctattttcaaactccagaaacgca 4477844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 155 - 243
Target Start/End: Complemental strand, 39137079 - 39136991
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 243  Q
    |||||||||||||||||| ||||   |||||||||  |||||||||||||||||  || ||||||||||||||||||||||| ||||||    
T  39137079 ggcttaattacacttttgatcctcgtattttgacccgctcacgaaaatggtcctgcctcttttaaatcgaacaaaatcgtccataaact 39136991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 158 - 317
Target Start/End: Complemental strand, 33881132 - 33880969
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaa--tcgtccttaaactat-atg--tttt 252  Q
    |||||| |||||||| ||||  ||||||||| |  ||||||||||||| || | | |||| ||||||||||||  |||||| |||||||| |||  ||||    
T  33881132 ttaattgcacttttgatcctcgcattttgactagttcacgaaaatggttctgtatgttttcaatcgaacaaaatctcgtccataaactatcatgtttttt 33881033  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtc 317  Q
    ||||| |||||||| |||| |||||||| |||||||| ||||||||| |||| ||| ||||||||    
T  33881032 ttgcagttttagtcttatc-ccctattttcaactccagaaacgcacataaatgacagttttagtc 33880969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 158 - 315
Target Start/End: Original strand, 35578902 - 35579058
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 256  Q
    |||||||||||||||||| |  ||||||||||| ||||| |||||||||||  |  ||| ||||||||||||| ||| | |||||||| |||||||||||    
T  35578902 ttaattacacttttggtcattgcattttgaccagctcacaaaaatggtcctgccactttcaaatcgaacaaaaccgt-cataaactatcatgttttttgc 35579000  T
Q  257 aattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttag 315  Q
    | ||||| || || |  ||||||| |||||||| ||||||| |||||| ||| ||||||    
T  35579001 agttttaatccta-catcctattttcaactccagaaacgcagagaaatgacatttttag 35579058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 245 - 330
Target Start/End: Original strand, 35160892 - 35160976
Alignment:
Q  245 tatgttttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgc 330  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||||  | ||||||||||| | | |||||||||||||||||||||    
T  35160892 tatgttttttgtaattttagtcctatctccctattttcaactcca-gagcgcacagaaatgatagttttagtccaaccacctatgc 35160976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 157 - 331
Target Start/End: Original strand, 34594585 - 34594758
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttg 255  Q
    |||||||||||||||||||||  ||||||||| |||||||||||||  ||     | |||| |||| ||||||||| ||| |||||||| ||| ||||||    
T  34594585 cttaattacacttttggtcctcgcattttgactaactcacgaaaattatctcgcatcttttcaatcaaacaaaatcatccctaaactatcatg-tttttg 34594683  T
Q  256 caattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    || |||||||| || | |||||||| |||||| | ||||  ||| |||| | | ||||||||||||||||||||||    
T  34594684 cagttttagtccta-ccccctattttcaactcgagaaacaaacataaatgatagttttagtccaaccacctatgct 34594758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 49064034 - 49064167
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 253  Q
    |||||||||||||||||||||||   |||||||||| ||||||||||||||  |  || ||| |||| |||||||||| ||| |||||||| ||| ||||    
T  49064034 ggcttaattacacttttggtcctcgtattttgaccagctcacgaaaatggtattgcctctttcaaatagaacaaaatcttccataaactatcatg-tttt 49064132  T
Q  254 tgcaattttagtcatatctccctatttccaactcca 289  Q
    |||| |||||||| || || ||||||| ||||||||    
T  49064133 tgcacttttagtcctaact-cctattttcaactcca 49064167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 294
Target Start/End: Original strand, 9393738 - 9393874
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttg 255  Q
    |||||||||||||||| ||||  |||||||| || ||||||||||| ||| |  || ||| ||||||||||||| ||||| |||||||| ||||||||||    
T  9393738 cttaattacacttttgatcctcgcattttgatcagctcacgaaaattgtcttgcctctttcaaatcgaacaaaaccgtcc-taaactatcatgttttttg 9393836  T
Q  256 caattttagtcatatctccctatttccaactccataaac 294  Q
    |  |||||||| || || ||||||| |||||||| ||||    
T  9393837 ctgttttagtcctacct-cctattttcaactccagaaac 9393874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 304
Target Start/End: Original strand, 5184488 - 5184543
Alignment:
Q  249 ttttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaat 304  Q
    |||||| ||||||||||| |||||||||||||||||||||| ||| ||||||||||    
T  5184488 ttttttacaattttagtcttatctccctatttccaactccaaaaatgcacagaaat 5184543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 153 - 220
Target Start/End: Complemental strand, 40669756 - 40669689
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaa 220  Q
    |||| ||||||||||||||| |||| ||||||||||||||||||||||||| || ||  |||||||||    
T  40669756 ttggtttaattacacttttgatccttccattttgaccaactcacgaaaatgatcatactttttttaaa 40669689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 266
Target Start/End: Original strand, 45815344 - 45815454
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atg-tttt 252  Q
    |||||||||||||||||||||||  ||||||||||| ||   |||||||||| |  || ||| ||||||||||||| ||||| |||||||| ||| ||||    
T  45815344 ggcttaattacacttttggtccttgcattttgaccagct---gaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactatcatgttttt 45815440  T
Q  253 ttgcaattttagtc 266  Q
    ||||| ||||||||    
T  45815441 ttgcagttttagtc 45815454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 304
Target Start/End: Original strand, 2658839 - 2658989
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 253  Q
    ||||||||||||||||| |||||    ||||| || |||||||||| |||||||  | |||| |||| ||||||||| |||||| || ||| || ||| |    
T  2658839 ggcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 2658938  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaat 304  Q
    |||| |||| |||||| ||||   |||| ||||||| ||||||| ||||||    
T  2658939 tgcatttttcgtcatacctcctattttcaaactccaaaaacgcagagaaat 2658989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 245
Target Start/End: Complemental strand, 49064266 - 49064176
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 245  Q
    |||||||||| ||||||| ||||  ||||||| |||  |||||||||||||| |  || ||| ||||||||||||||||||  ||||||||    
T  49064266 ggcttaattatacttttgatcctcacattttggccagttcacgaaaatggtcatgactctttcaaatcgaacaaaatcgtcaataaactat 49064176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 5184431 - 5184482
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtccta 209  Q
    ||||||||| ||||||||||   |||||||||||||||||||| ||||||||    
T  5184431 ttaattacatttttggtccttggattttgaccaactcacgaaattggtccta 5184482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 266
Target Start/End: Original strand, 33880622 - 33880732
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttg 255  Q
    ||||||| || ||||||||||   |||||||||| ||||| ||||| || ||  || ||| ||||||||||||| ||||| |||| ||| || |||||||    
T  33880622 cttaattgcatttttggtcctcgtattttgaccagctcacaaaaattgttctgcctctttcaaatcgaacaaaaccgtccctaaattatcatattttttg 33880721  T
Q  256 caattttagtc 266  Q
    || ||||||||    
T  33880722 cacttttagtc 33880732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 35288901 - 35288986
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctt 238  Q
    ||||||||||||||||||||||| |   |||||| || |||||||||| |||||||  | |||| |||  ||||||||| ||||||    
T  35288901 ttggcttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtcctt 35288986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 153; Significance: 5e-81; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 38008497 - 38008321
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38008497 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 38008398  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||| |||||||||||||||||||||||||||||||| |||| | | ||||||||||||||||||||||    
T  38008397 gcagttttagtcctatctccctatttccaactccataaacgcacataaatgatagttttagtccaaccacctatgct 38008321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 11539637 - 11539814
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  11539637 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 11539736  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||| |||||||| |||||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  11539737 tgcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 11539814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 155 - 328
Target Start/End: Original strand, 20127736 - 20127910
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 253  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  20127736 ggcttaattacacttttggtcctaccattttgaccaattcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 20127835  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctat 328  Q
    |||| |||||||| |||||||||||||||||| ||| ||||||||| |||| |||||||||||||||||||||||    
T  20127836 tgcagttttagtcctatctccctatttccaaccccagaaacgcacaaaaatgacaattttagtccaaccacctat 20127910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 33921158 - 33920981
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||    
T  33921158 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactaaatgtttttt 33921059  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||| |||||||| |||||||||||||||||||| | |||||||||||||| ||| ||||||||||||||||||||||    
T  33921058 tgcagttttagtcctatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaaccacctatgct 33920981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 155 - 328
Target Start/End: Original strand, 6949451 - 6949625
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 253  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  6949451 ggcttaattacatttttggtcctatcattttgactaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctttaactatatgtttttt 6949550  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctat 328  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  6949551 tgcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctat 6949625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 62957 - 63133
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  62957 ggcttaattacacttatggtccttccattttgaccaactcacgaaaatggtcctacctttttaaaatcgaacaaaatcgtccttaaactatatgtttttt 63056  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||| |||||||||||||||||||| | ||||||||| |||| ||| ||||||||||||||||||||||    
T  63057 gcagttttagtcctatctccctatttccaactcaagaaacgcacataaatgacagttttagtccaaccacctatgct 63133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 4356302 - 4356126
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  4356302 ggcttaattacacttttggtcctatcattttgaccaactcacgataatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 4356203  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| ||||| |  ||| |||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  4356202 gcagttttaattctatttccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 4356126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 149 - 331
Target Start/End: Complemental strand, 11540190 - 11540008
Alignment:
Q  149 aaaattggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 248  Q
    ||||| |||||||||| |||||||||| |  |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  11540190 aaaataggcttaattatacttttggtcatcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 11540091  T
Q  249 ttttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||||||| |||||||||||| |||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  11540090 ttttttgcagttttagtcatatatccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 11540008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 4809425 - 4809249
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||    
T  4809425 ggcttaattacacttttggtcctaccattttgactaactcacgaaaatggtcctatgttttttaaattgaacaaagtcgtccttaaactatatgtttttt 4809326  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||| ||||||||||||||||||| || ||| ||||| |||| ||| ||||||||||||||||||||||    
T  4809325 gcagttttagtcctatctccctatttccaactacaaaaaagcacaaaaatgacagttttagtccaaccacctatgct 4809249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 20128283 - 20128107
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||||||||  |||||| |||||||||||||| |||||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  20128283 ggcttaattacacttttggtccttgcatttttaccaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccttaaactatatgtttttt 20128184  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||||||||||| |||||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  20128183 gcaattttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgct 20128107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 16952935 - 16953113
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg--tttt 252  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||  ||||    
T  16952935 ggcttaattatacttttggtcctaccattttgaccaactcacgaaaattgtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 16953034  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||  ||||||||||||||||||||||||||||| | |||||||||||||| ||| |||||||||||| |||||||||    
T  16953035 ttgcggttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaactacctatgct 16953113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 17060906 - 17061084
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg--tttt 252  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||  ||||    
T  17060906 ggcttaattatacttttggtcctaccattttgaccaactcacgaaaattgtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 17061005  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||  ||||||||||||||||||||||||||||| | |||||||||||||| ||| |||||||||||| |||||||||    
T  17061006 ttgcggttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaactacctatgct 17061084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 155 - 329
Target Start/End: Complemental strand, 43160557 - 43160382
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-ttt 253  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  43160557 ggcttaattacactttaggtcctaccattttgacaaactcacgaaaatggtcctatcttttttaaatcgaactaaatcgtccttaaactatatgtttttt 43160458  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatg 329  Q
    |||| |||||||| |||||||||||||||||||||| |||||||||||||| ||| ||||| |||||||| |||||    
T  43160457 tgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttaatccaaccatctatg 43160382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 153 - 331
Target Start/End: Original strand, 42192238 - 42192416
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 252  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||    
T  42192238 ttggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttt 42192337  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||| |||||||| |||||||||||||| ||||||| ||||||||| |||| ||| ||||||||||||||| ||||||    
T  42192338 ttgcagttttagtcctatctccctatttctaactccagaaacgcacataaatgacagttttagtccaaccacatatgct 42192416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 42192789 - 42192612
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 253  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||| ||| |||||    
T  42192789 ggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactagatgtttttt 42192690  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||| ||||||||||||| ||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  42192689 tgcagttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 42192612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 38007950 - 38008127
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 253  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| ||||||||||| |||||    
T  38007950 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 38008049  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||| ||||||| ||||||||    
T  38008050 tgcagttttagtcatatctccctatttccaactccaaaaacgcacagaaatgacagttttaatccaaccgcctatgct 38008127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 13399965 - 13399790
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    ||||||||| || |||| |||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||| ||||||||||||||| ||||||    
T  13399965 ggcttaattgcaattttagtcctaccattttgaccaactcacgaaaatggtc-tatttcttttaaatcgaacaaaattgtccttaaactatatatttttt 13399867  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||| ||||||||||||||||    
T  13399866 gcagttttagtcatatctccctatttccaactccataaacgcatagaaatgacagttttaatccaaccacctatgct 13399790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 44219644 - 44219820
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    ||||||||||||||||||||||| ||||||||| |||||||| |||||| ||||| ||||||||||||||||||||| ||||||||| ||||||||||||    
T  44219644 ggcttaattacacttttggtccttccattttgatcaactcacaaaaatgatcctaccttttttaaatcgaacaaaattgtccttaaattatatgtttttt 44219743  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||| ||||||||| |||||||||||| |||||||||||||| ||| ||||||||||| ||||||||||    
T  44219744 gcagttttagtcctatctccctgtttccaactccagaaacgcacagaaatgacagttttagtccaatcacctatgct 44219820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 158 - 331
Target Start/End: Original strand, 13315496 - 13315673
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg---tttttt 254  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||   ||||||    
T  13315496 ttaattacactttttgtcctaccattttgaccaactcatgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttttt 13315595  T
Q  255 gcaattttagtcatatctccctatttccaactcca-taaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||| ||||||||||||||||||||||  ||| |||||||||| ||| ||||||||||||||||||||||    
T  13315596 gcagttttagtcctatctccctatttccaactccagaaaatgcacagaaatgacagttttagtccaaccacctatgct 13315673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 152 - 329
Target Start/End: Original strand, 4355752 - 4355929
Alignment:
Q  152 attggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttt 251  Q
    ||||||||||||||||||||||||||  |||||||||| |||||||||| ||||| || || ||||||||||||||||||||||| ||||||||||||||    
T  4355752 attggcttaattacacttttggtccttgcattttgacctactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttt 4355851  T
Q  252 tttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatg 329  Q
    |||||| |||||||| ||||||||||||| |||||||| ||||||||| |||| ||| ||||||||||||||||||||    
T  4355852 tttgcagttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatg 4355929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 43216255 - 43216079
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    ||||||||||||||||| |||||  | ||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |||||||||| ||||||    
T  43216255 ggcttaattacacttttagtccttgcgttttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatatttttt 43216156  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||| |||||| ||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||    
T  43216155 gcagttttagtcctatctctctatttccaactccagaaatgcacagaaatgacaattttagtccaaccacctatgct 43216079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 158 - 331
Target Start/End: Complemental strand, 15551218 - 15551044
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-ttttgc 256  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||  |||||||| ||||||    
T  15551218 ttaattacacttttggccctaccattttgaccaactcacaaaaatggtcatatattttttaaatcgaacaaaatcgtccttaagttatatgtttttttgc 15551119  T
Q  257 aattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    | |||||||| |||||||||||||||||||||| ||||||||| |||||| | ||||||||||||||| ||||||    
T  15551118 agttttagtcctatctccctatttccaactccagaaacgcacataaataatagttttagtccaaccacatatgct 15551044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 159 - 331
Target Start/End: Complemental strand, 16175892 - 16175719
Alignment:
Q  159 taattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-ttttgca 257  Q
    |||||||||||||||||||  |||||| |||||||||||||| ||||| || || ||||||||||||||||||||||||||||||||||||| |||||||    
T  16175892 taattacacttttggtccttacatttttaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccttaaactatatgtttttttgca 16175793  T
Q  258 attttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
     |||||||| |||||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  16175792 gttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 16175719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 32418159 - 32418333
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    ||||||||||||||| |||||||  ||||||||||||||||||||| |||||||| || |||  |||||||||||||||||| |||||||||| ||||||    
T  32418159 ggcttaattacacttatggtccttgcattttgaccaactcacgaaattggtcctacctcttt--aatcgaacaaaatcgtccctaaactatatatttttt 32418256  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||||||||||| |||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  32418257 gcagttttagtcatatctccttatttccaactccagaaacgcacagaaatgacatttttagtccaaccacctatgct 32418333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 156 - 331
Target Start/End: Complemental strand, 16953479 - 16953304
Alignment:
Q  156 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttg 255  Q
    ||||||||||||||||||||||  |||||||||||||||| |||| |||||||| || |||||||||||||||||  |||| |||| |||||||||||||    
T  16953479 gcttaattacacttttggtccttgcattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaaatgtccctaaagtatatgttttttg 16953380  T
Q  256 caattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    || |||||||| |||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |||||||    
T  16953379 cagttttagtcctatctccctatttccaactccaaaaacgcacagaaatgacagttttagtccaaccaactatgct 16953304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 44220191 - 44220013
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||||||||| || |||||||||||| ||||||||||||| |||||||||||||||||    
T  44220191 ggcttaattacactttttgtcctcgcattttgaccaactcacgaaaatggtcataccttttttaaatcaaacaaaatcgtccctaaactatatgtttttt 44220092  T
Q  255 gcaattttagtcatatct--ccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    | | ||||||||||||||  ||||||||||||||||| ||||| ||| |||| | ||||||||||||||||||||||||    
T  44220091 gtagttttagtcatatctccccctatttccaactccagaaacgtacaaaaatgataattttagtccaaccacctatgct 44220013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 158 - 331
Target Start/End: Original strand, 4808882 - 4809055
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 257  Q
    ||||||||| |||| || ||  ||||||||||||||||||||| || ||||| || ||||||||||||||||||||||| |||||||||||||||||| |    
T  4808882 ttaattacatttttagttcttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccataaactatatgttttttgta 4808981  T
Q  258 attttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
     |||||||| ||||| |||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  4808982 gttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 4809055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 158 - 331
Target Start/End: Original strand, 33920615 - 33920788
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 257  Q
    ||||||||| ||||||||||  ||||||||||||||||||||| || || || || ||||||||||||||||||||||| ||||||||||| ||||||||    
T  33920615 ttaattacatttttggtccttgcattttgaccaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgatttttgca 33920714  T
Q  258 attttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
     |||||||| ||||||||||||| |||||||| ||||||| |||||| ||| |||||||||| |||||||||||    
T  33920715 gttttagtcctatctccctattttcaactccagaaacgcatagaaatgacagttttagtccagccacctatgct 33920788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 649527 - 649702
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||||||||  ||| |||||||||| |||||| |||||||| || ||||||||||||||||||||||| |||||||||||||||||    
T  649527 ggcttaattacacttttggtccttgcatcttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 649626  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||  | |||||||||||||||||||| ||||||||| |||| ||  |||||||||| |||||||||||    
T  649627 gcagttttagttctgtctccctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 649702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 155 - 265
Target Start/End: Original strand, 5560051 - 5560161
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  5560051 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaattgaacaaaatcgtccttaaactatatatttttt 5560150  T
Q  255 gcaattttagt 265  Q
    ||| |||||||    
T  5560151 gcagttttagt 5560161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 158 - 323
Target Start/End: Original strand, 15550676 - 15550842
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttttgc 256  Q
    ||||||||||||||| ||||  |||| |||||||||||||||| |||||||| || ||||||||||||||||||||||| ||||||||||| ||||||||    
T  15550676 ttaattacacttttgatccttgcattctgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgc 15550775  T
Q  257 aattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaacca 323  Q
    | |||||||| ||| ||||||||| |||||||| |||||||||||||| ||| ||||||| ||||||    
T  15550776 agttttagtcctatttccctattttcaactccagaaacgcacagaaatgacagttttagttcaacca 15550842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 149 - 331
Target Start/End: Complemental strand, 63516 - 63328
Alignment:
Q  149 aaaattggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 248  Q
    ||||| || ||||||| | ||||||||||   |||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||| |||||||||||    
T  63516 aaaataggtttaattatatttttggtccttgtattttgaccaactcacgaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactatatg 63417  T
Q  249 tt------ttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||      ||||||| |||||||| ||||| |||||||||||||| | ||||||||| |||| ||| ||||||||||||||||||||||    
T  63416 ttttttttttttgcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 63328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 158 - 329
Target Start/End: Original strand, 43160012 - 43160184
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactata-tgttttttgc 256  Q
    ||||||||| ||||||||||  |||||||| |||||||||||| ||||| || || ||||||||||||||||||||||| |||||||||   ||||||||    
T  43160012 ttaattacatttttggtccttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatacatttttttgc 43160111  T
Q  257 aattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatg 329  Q
    | |||||||| ||||||||||||| |||||||| ||||||||| |||| ||| |||||||| |||||||||||    
T  43160112 agttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtctaaccacctatg 43160184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 158 - 331
Target Start/End: Complemental strand, 9330338 - 9330164
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-ttttgc 256  Q
    ||||||||||||||||||||  ||||||||||||||||||||| | ||| || || |||||||||||||||||||||||  |||||||||||| ||||||    
T  9330338 ttaattacacttttggtccttgcattttgaccaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgtccccaaactatatgtttttttgc 9330239  T
Q  257 aattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    | |||||||| ||||| ||||||| |||||  | |||| || |||||| ||| ||||||||||||||||||||||    
T  9330238 agttttagtcctatctacctattttcaactatagaaacacatagaaatgacagttttagtccaaccacctatgct 9330164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 155 - 297
Target Start/End: Complemental strand, 32418692 - 32418550
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||| ||||||||||||| |||||||||||| |||||||| || | ||| || |||||||||||||||||||||||||||||||||| ||||||    
T  32418692 ggcttaattatacttttggtcctatcattttgaccaattcacgaaattgattctacctcttttaaatcgaacaaaatcgtccttaaactatatatttttt 32418593  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgca 297  Q
    ||| ||||| || |||||||||||||||||||| | |||||||    
T  32418592 gcagttttaatcttatctccctatttccaactctagaaacgca 32418550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 155 - 316
Target Start/End: Complemental strand, 24140220 - 24140064
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||| ||||  ||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||     |||    
T  24140220 ggcttaattacacttttgttcctcgcatcttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccataaactata-----ttt 24140126  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagt 316  Q
    ||| |||||||  ||| |||||||||||||||||| |||||||||||||| ||| |||||||    
T  24140125 gcagttttagttctatatccctatttccaactccagaaacgcacagaaatgacatttttagt 24140064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 187 - 323
Target Start/End: Original strand, 13399454 - 13399590
Alignment:
Q  187 accaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcaattttagtcatatctccctatttccaact 286  Q
    ||||| |||||||| ||||| || || |||||||| |||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||    
T  13399454 accaattcacgaaattggtcatacctcttttaaatggaacaaaatcgtccctaaactatatgttttttgcagttttagtcctatctccctatttccaact 13399553  T
Q  287 ccataaacgcacagaaataacaattttagtccaacca 323  Q
    ||| |||||||||||||| ||| |||||||| |||||    
T  13399554 ccagaaacgcacagaaatgacagttttagtctaacca 13399590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 228 - 331
Target Start/End: Complemental strand, 5561023 - 5560920
Alignment:
Q  228 aaatcgtccttaaactatatgttttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccaccta 327  Q
    ||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||    
T  5561023 aaatcgtccctaaactatatgttttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccaccta 5560924  T
Q  328 tgct 331  Q
    ||||    
T  5560923 tgct 5560920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 153 - 289
Target Start/End: Complemental strand, 6949992 - 6949854
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactata--tgtt 250  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||  | |||||||| |||||||||||||| |||||||||  | ||    
T  6949992 ttggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacatcttttaaatagaacaaaatcgtccctaaactatatttttt 6949893  T
Q  251 ttttgcaattttagtcatatctccctatttccaactcca 289  Q
    ||||||| |||||||| ||||||| |||||| |||||||    
T  6949892 ttttgcagttttagtcctatctccatatttcaaactcca 6949854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 155 - 313
Target Start/End: Complemental strand, 31797323 - 31797166
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||||||| |  || ||| ||||||||||||| ||||| |||||||||||||||||    
T  31797323 ggcttaattacacttttggtcctcacattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactatatgtttttt 31797224  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaatttt 313  Q
    ||| |||||||| || || ||||||| |||||| | ||||||| |||||| ||| ||||    
T  31797223 gcagttttagtcctacct-cctattttcaactctagaaacgcagagaaatgacagtttt 31797166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 157 - 237
Target Start/End: Complemental strand, 649881 - 649801
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcct 237  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  649881 cttaattacacttttggtcctatcattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtcct 649801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 25336146 - 25335977
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat-gttttt 253  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| ||||||||  | ||||||||||||||||||||||| |||| |||||  |||||    
T  25336146 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacttcttttaaatcgaacaaaatcgtccctaaattatatatttttt 25336047  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||| |||||||||        ||||||||||| || |||  |||| |||| ||| ||||||||||||||||||||||    
T  25336046 tgcagttttagtca--------tatttccaactacaaaaattcacataaatgacacttttagtccaaccacctatgct 25335977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 28143575 - 28143400
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 253  Q
    ||||||||| |||||||||||||  ||||||||||| |||||||||||||||||  || ||| ||||||||||||||||||| |||||||| ||| ||||    
T  28143575 ggcttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatg-tttt 28143477  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||| |||||||| || |  ||||||| |||||||| ||||||| |||||| ||| |||||| || ||| ||||||||    
T  28143476 tgcagttttagtccta-cgtcctattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgct 28143400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 9329915 - 9329974
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatctttttt 217  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  9329915 ttaattacacttttggtcctacaattttgaccaactcacaaaaatggtcctatctttttt 9329974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 251 - 329
Target Start/End: Original strand, 43215805 - 43215883
Alignment:
Q  251 ttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatg 329  Q
    ||||||| |||||||||||||||||||||| |||||||| ||||| | |||||| ||| ||||||||||||||||||||    
T  43215805 ttttgcagttttagtcatatctccctattttcaactccaaaaacgaatagaaatgacagttttagtccaaccacctatg 43215883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 304
Target Start/End: Complemental strand, 14942392 - 14942241
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atg--ttt 251  Q
    ||||||||||||||||||||| |  ||||||||||| ||||||||||||||| | ||| ||| |||||||||||||| |||| |||| ||| |||  |||    
T  14942392 ggcttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaattgtccataaattatcatgttttt 14942293  T
Q  252 tttgcaattttagtcatatctccctatttccaactccataaacgcacagaaat 304  Q
    |||||| |||||||| || |  ||||||| |||||||| ||| ||| ||||||    
T  14942292 tttgcagttttagtccta-catcctattttcaactccagaaatgcagagaaat 14942241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 158 - 331
Target Start/End: Original strand, 22445642 - 22445816
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg---tttttt 254  Q
    |||||||||||||||||| | | ||||||| ||||| |  ||| ||||| || | || ||||||||||||||| |||||||||| || |||   ||||||    
T  22445642 ttaattacacttttggtcttgc-attttgatcaacttataaaattggtcataccattattaaatcgaacaaaaccgtccttaaatta-atgttttttttt 22445739  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
     || |||||||  ||||||||||||| ||||| || |||| |||| |||| ||| |||||||| |||||||||||||    
T  22445740 acagttttagtactatctccctattttcaacttcagaaacacacataaatgacagttttagtcaaaccacctatgct 22445816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 262
Target Start/End: Original strand, 20495196 - 20495301
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 256  Q
    |||||| |||||||||| ||  |||||||||||||||||||||||| || |  || ||||||||| ||||||||||||| |||||||| || ||||||||    
T  20495196 ttaatttcacttttggttctcgcattttgaccaactcacgaaaatgatcatgcctcttttaaatctaacaaaatcgtccctaaactatcatattttttgc 20495295  T
Q  257 aatttt 262  Q
    | ||||    
T  20495296 actttt 20495301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 5035903 - 5035978
Alignment:
Q  195 acgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcaattttagtcata 269  Q
    |||||||||||||| ||||||||||||||||||||| ||||| |||||||| || ||||||||| ||||| |||||    
T  5035903 acgaaaatggtcctgtcttttttaaatcgaacaaaaccgtccctaaactatcatattttttgcagttttaatcata 5035978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 241
Target Start/End: Complemental strand, 2190612 - 2190536
Alignment:
Q  165 cacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaa 241  Q
    ||||||||||| |  ||||||||||| ||||||||| |||||||  |||||| ||||||||||||||||||| ||||    
T  2190612 cacttttggtcatcgcattttgaccagctcacgaaattggtcctgcctttttcaaatcgaacaaaatcgtccctaaa 2190536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 35779697 - 35779791
Alignment:
Q  144 gttataaaattggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctt 238  Q
    ||||||| ||||||||||||||||||||||||||    |||||||  ||||||||||||||||||  | |||| |||  ||||||||| ||||||    
T  35779697 gttataatattggcttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtcctt 35779791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 269
Target Start/End: Original strand, 3822924 - 3823036
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 256  Q
    ||||||||||||||||||||  |||||| ||||||||| |||| || ||||  | |||||||| ||||||||    ||| || ||||| |||||||||||    
T  3822924 ttaattacacttttggtcctcgcattttaaccaactcatgaaattgatcctgccctttttaaaccgaacaaagcactccctatactatcatgttttttgc 3823023  T
Q  257 aattttagtcata 269  Q
    |||||| ||||||    
T  3823024 aattttggtcata 3823036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 265
Target Start/End: Complemental strand, 3824251 - 3824143
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 256  Q
    ||||||| |||||||||| |  |||||| |||||||||||||| ||||| |  | ||||||||||||||||||  || | ||  |||| |||||||||||    
T  3824251 ttaattatacttttggtcatcgcattttaaccaactcacgaaattggtcatgccctttttaaatcgaacaaaacagttcatatgctatcatgttttttgc 3824152  T
Q  257 aattttagt 265  Q
    |||||||||    
T  3824151 aattttagt 3824143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 9329833 - 9329892
Alignment:
Q  158 ttaattacacttttggtcctaccattttga-ccaactcacgaaaatggtcctatcttttt 216  Q
    ||||||||||||||||||||| |||||||| | ||||||||||||||||  |||||||||    
T  9329833 ttaattacacttttggtcctatcattttgatctaactcacgaaaatggttatatcttttt 9329892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 9329980 - 9330056
Alignment:
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||| |||||||| ||||||| |||||||||||| | |||||||||||||| ||| ||| ||| ||||||| ||||||    
T  9329980 tgcacttttagtcctatctccttatttccaactctagaaacgcacagaaatgacagtttcagt-caaccacttatgct 9330056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 315
Target Start/End: Original strand, 18450830 - 18450991
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 253  Q
    |||||||||||||||||||||||    ||||| || |||||||||| ||||||   | |||| |||  ||||||||  |||||| || ||| || |||||    
T  18450830 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcattttttt 18450929  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttag 315  Q
    |||| |||||||| || ||||   |||| ||||||| ||||||| |||||| ||| ||||||    
T  18450930 tgcatttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 18450991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 315
Target Start/End: Complemental strand, 28617159 - 28616998
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 253  Q
    |||||||||||||||||||||||    ||||| || |||||||||| |||| || || |||| |||  ||||||||| |||||| || ||| || ||| |    
T  28617159 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcatttttgt 28617060  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttag 315  Q
    |||| |||| ||| || ||||   |||| ||||||| ||||||| ||||||| || ||||||    
T  28617059 tgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatagcagttttag 28616998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 189
Target Start/End: Original strand, 17023600 - 17023634
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgacc 189  Q
    |||||||||| ||||||||||||||||||||||||    
T  17023600 ggcttaattatacttttggtcctaccattttgacc 17023634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 5561083 - 5561018
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcg 223  Q
    |||||||| |||||||||||  |||||| || ||||||||||| || ||||| || ||||||||||    
T  5561083 ttaattacccttttggtccttgcattttaactaactcacgaaattgatcctacctcttttaaatcg 5561018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 20440576 - 20440523
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcct 208  Q
    |||||||||||||||||||||||    ||||| ||||||||||||| |||||||    
T  20440576 ggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcct 20440523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 20444749 - 20444802
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcct 208  Q
    |||||||||||||||||||||||    ||||| ||||||||||||| |||||||    
T  20444749 ggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcct 20444802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 149; Significance: 1e-78; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 28290190 - 28290014
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28290190 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcatttttaaatcgaacaaaatcgtccttaaactatatgtttttt 28290091  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||| |||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |||||||    
T  28290090 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccatctatgct 28290014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 153 - 331
Target Start/End: Original strand, 19291354 - 19291533
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttt 251  Q
    ||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  19291354 ttggcttaattacacttttggtcctactattttgaacaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 19291453  T
Q  252 tttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||||| |||||||| ||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  19291454 tttgcagttttagtcttatctccttatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 19291533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 156 - 331
Target Start/End: Complemental strand, 8419165 - 8418991
Alignment:
Q  156 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttg 255  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  8419165 gcttaattacacttttggtcctaccattttgaccaactcacgaatatggtcctatcttttttaaattgaacaaaatcgtccttaaactatat-ttttttg 8419067  T
Q  256 caattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    || |||||||| |||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||||||    
T  8419066 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttaatccaaacacctatgct 8418991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 15029855 - 15029679
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  15029855 ggcttaattacacttttggtcctcccattttgaccaactcacgaaaatggtcttaccttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 15029756  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||   ||||||||||||| ||||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  15029755 gcagttttagttcgatctccctatttcaaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 15029679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 155 - 293
Target Start/End: Original strand, 18149733 - 18149871
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18149733 ggcttaattacacttttgatcctaccatttggaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 18149832  T
Q  255 gcaattttagtcatatctccctatttccaactccataaa 293  Q
    ||| |||||||| ||| ||||||||||||||||||||||    
T  18149833 gcagttttagtcctatttccctatttccaactccataaa 18149871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 21371242 - 21371066
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||| ||||  ||||||||||||||||  ||| |||||||| || ||||||||| ||||||||||||| |||||||||||||||||    
T  21371242 ggcttaattacacttttgatccttgcattttgaccaactcataaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaactatatgtttttt 21371143  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||||||||||| |||||||||||||||||||||| ||||||||| |||| ||| ||||||| ||||||||||||||    
T  21371142 gcaattttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagttcaaccacctatgct 21371066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 155 - 329
Target Start/End: Original strand, 28289684 - 28289858
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||| | ||| || || ||||||||||||||||||||||| |||| ||||||||||||    
T  28289684 ggcttaattacacttttgatccttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaattatatgtttttt 28289783  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatg 329  Q
     || |||||||| |||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||    
T  28289784 ccagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatg 28289858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 159 - 331
Target Start/End: Original strand, 38900648 - 38900818
Alignment:
Q  159 taattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcaa 258  Q
    |||||||||||||||||||  |||||||||||||||||||||||| ||||| || ||||||||||||||||||||||| |||| |||||||||||||||     
T  38900648 taattacacttttggtcctcgcattttgaccaactcacgaaaatgatcctacctcttttaaatcgaacaaaatcgtccctaaattatatgttttttgcag 38900747  T
Q  259 ttttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||||||| |||||||||||||||||||||||||||| ||| |||| |||   ||||||||||||||||||||    
T  38900748 ttttagtcctatctccctatttccaactccataaacgtacataaatgaca--gttagtccaaccacctatgct 38900818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 147 - 331
Target Start/End: Complemental strand, 15115647 - 15115465
Alignment:
Q  147 ataaaatt-ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 245  Q
    |||||||| |||||||||||||||||| ||||  |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  15115647 ataaaattaggcttaattacacttttgatcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccttaaactat 15115548  T
Q  246 atgttttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |   |||||||| ||||||||||||| ||||||||||||||| | ||||||||| |||| ||| ||||||| ||||||| ||||||    
T  15115547 a---tttttgcagttttagtcatatcgccctatttccaactcaaaaaacgcacataaatgacagttttagttcaaccacatatgct 15115465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 153 - 323
Target Start/End: Complemental strand, 38901188 - 38901020
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 252  Q
    ||||||||||||||||||||||||| |||||||||| ||  |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  38901188 ttggcttaattacacttttggtccttccattttgactaaagcacgaaaatggtcctaccctttttaaatcgaacaaaatcgtccttaaactatatgtttt 38901089  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaacca 323  Q
    ||||| ||||||| |||||||| |||||||||  ||| ||||||||| |||| ||| ||||||||||||||    
T  38901088 ttgcagttttagttatatctccttatttccaa--ccagaaacgcacataaatgacagttttagtccaacca 38901020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 156 - 331
Target Start/End: Complemental strand, 32697771 - 32697593
Alignment:
Q  156 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt---tt 252  Q
    |||||||||||||||||||| |  ||||||||||||||||||||| |||||||| || |||||||||||||| |||||||| |||||||||||||   ||    
T  32697771 gcttaattacacttttggtcattgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacagaatcgtccctaaactatatgttttatt 32697672  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||| ||||||| ||| ||||||||||||||||||| |||| ||||||||| |||| |||||||||||||||||||||    
T  32697671 ttgcagttttagtgatacctccctatttccaactccagaaacacacagaaatgacaaatttagtccaaccacctatgct 32697593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 157 - 331
Target Start/End: Original strand, 39083361 - 39083536
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaac--tatatgtttttt 254  Q
    |||||||||||||| | ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||  ||||| ||||||    
T  39083361 cttaattacacttt-gatcctatcattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaattgttcttaaactatatatatttttt 39083459  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||||||||||| |||||||||||||| |||| ||||||||| ||| ||||||||||| ||| ||||||    
T  39083460 gcagttttagtcatatctccatatttccaactccagaaacacacagaaatgacagttttagtccaatcacatatgct 39083536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 158 - 331
Target Start/End: Original strand, 4966819 - 4966991
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 257  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| || ||  || ||||||||||||||||||||||| |||||||||||||||| |||    
T  4966819 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatagtactgcctcttttaaatcgaacaaaatcgtccctaaactatatgtttttagca 4966918  T
Q  258 attttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
     ||||||||||||| ||||||||||||||| | ||| |||||||||| ||| |||| | |||||||||||||||    
T  4966919 gttttagtcatatc-ccctatttccaactctagaaatgcacagaaatgacagttttgggccaaccacctatgct 4966991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 4967317 - 4967139
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt--tt 252  Q
    |||||||||||||||||||||||  ||||||||||||||||| ||||||||| || || ||||||||||||||||||||||| |||||||||||||  ||    
T  4967317 ggcttaattacacttttggtcctcacattttgaccaactcacaaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 4967218  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||| |||||||| ||| |||||||||| ||||| | ||||||||| |||| | | ||||||||||||||| ||||||    
T  4967217 ttgcagttttagtcctatatccctatttctaactctagaaacgcacataaatgatagttttagtccaaccacatatgct 4967139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 146 - 331
Target Start/End: Complemental strand, 18150279 - 18150093
Alignment:
Q  146 tataaaattggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 245  Q
    |||||| | ||||||||||||||| || ||||   |||||||| ||||||||||| |||||||| || ||||||||||||||||||| ||| ||||||||    
T  18150279 tataaactaggcttaattacacttgtgatccttgtattttgacaaactcacgaaattggtcctacctcttttaaatcgaacaaaatcatccctaaactat 18150180  T
Q  246 atgtt-ttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||| ||||||| |||||||| |||||||||||||||||||||| ||||||||| |||| ||  ||||||| ||||||||||||||    
T  18150179 atgtttttttgcagttttagtcctatctccctatttccaactccagaaacgcacataaatgaccgttttagttcaaccacctatgct 18150093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 16752582 - 16752757
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    ||||||||||||||||||||||   ||||||||||| |||||||||||| || |   | ||| ||||||||||||||||||| |||||||||||||||||    
T  16752582 ggcttaattacacttttggtccctgcattttgaccagctcacgaaaatgatcatgcttctttcaaatcgaacaaaatcgtccataaactatatgtttttt 16752681  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||| |||||| || ||||||| |||||||||||||||| |||||| | | |||||| || ||| ||||||||    
T  16752682 gcagtttttgtcatacct-cctattttcaactccataaacgcaaagaaatgatagttttagacctaccccctatgct 16752757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 193 - 331
Target Start/End: Original strand, 5161620 - 5161759
Alignment:
Q  193 tcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt-gcaattttagtcatatctccctatttccaactccata 291  Q
    |||||||||| ||| |||||||||||||||||||||||| ||| ||||| |||||||||||| ||| |||||||| ||||| ||||||||||||| || |    
T  5161620 tcacgaaaattgtcatatcttttttaaatcgaacaaaattgtctttaaattatatgtttttttgcagttttagtcttatcttcctatttccaacttcaaa 5161719  T
Q  292 aacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||||| |||||| ||| ||||||| ||||||||||||||    
T  5161720 aacgcatagaaatgacagttttagttcaaccacctatgct 5161759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 158 - 297
Target Start/End: Original strand, 21370689 - 21370836
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaacta--------tatgt 249  Q
    ||||||| | |||| ||||||| ||||||||||||| |||||||||||  |||||||||||||||||||||||||||| ||||||||        ||| |    
T  21370689 ttaattatattttttgtcctactattttgaccaactgacgaaaatggttatatcttttttaaatcgaacaaaatcgtctttaaactattattttttattt 21370788  T
Q  250 tttttgcaattttagtcatatctccctatttccaactccataaacgca 297  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||    
T  21370789 tttttgcaattttagtcctatctccctatttccaactccagaaacgca 21370836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 158 - 323
Target Start/End: Complemental strand, 14340953 - 14340785
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactata---tgtttttt 254  Q
    ||||||||| ||||||| ||  ||||||||||||||||||||| ||||| ||  | ||||||||||||||||||||||| |||||||||   | ||||||    
T  14340953 ttaattacatttttggtacttgcattttgaccaactcacgaaattggtcatacatcttttaaatcgaacaaaatcgtccataaactatatattttttttt 14340854  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaacca 323  Q
    | | |||||||| ||||||| |||||||||||||| ||||| | |||||| ||| |||||||| |||||    
T  14340853 gtagttttagtcctatctccttatttccaactccaaaaacgtagagaaatgacagttttagtcaaacca 14340785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 14340401 - 14340478
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtc 235  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  14340401 ttaattacatttttggtcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtc 14340478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 156 - 315
Target Start/End: Original strand, 10721787 - 10721945
Alignment:
Q  156 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 254  Q
    ||||||||||| ||||||||||  ||||||||||| ||||||||||||||| | ||| ||| ||||||||||||||||||| |||||||| |||||||||    
T  10721787 gcttaattacatttttggtcctcacattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaatcgtcc-taaactatcatgtttttt 10721885  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttag 315  Q
    ||| |||||||| || || ||||||| |||||||| ||||| | |||||| ||| ||||||    
T  10721886 gcagttttagtcctacct-cctattttcaactccagaaacgtagagaaatgacagttttag 10721945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 157 - 331
Target Start/End: Original strand, 22651347 - 22651521
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttg 255  Q
    |||||||||| ||||||| ||   |||||||||| |||||| |||||||| |  || ||||||||| ||||||| | |||||||||||| |||||||| |    
T  22651347 cttaattacatttttggttctcgtattttgaccagctcacggaaatggtcatgcctcttttaaatcaaacaaaaccatccttaaactatcatgttttt-g 22651445  T
Q  256 caattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    || |||||||| || |||| ||||| |||||||| ||||||||| ||||  || ||||||||||||||||||||||    
T  22651446 cagttttagtcctacctccttattttcaactccagaaacgcacaaaaatggcagttttagtccaaccacctatgct 22651521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 315
Target Start/End: Original strand, 27307061 - 27307220
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 253  Q
    |||||||||||||||||||| ||  |||||||||||||| | |||||||||| | | | ||| |||| |||||||||| ||| |||||||| ||||||||    
T  27307061 ggcttaattacacttttggttctcgcattttgaccaacttatgaaaatggtcatgtttctttcaaattgaacaaaatcatcc-taaactatcatgttttt 27307159  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttag 315  Q
    |||| |||||||| || || ||||||| |||||||| ||||||| |||||| ||| ||||||    
T  27307160 tgcagttttagtcttacct-cctattttcaactccagaaacgcatagaaatgacagttttag 27307220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 155 - 286
Target Start/End: Complemental strand, 5162115 - 5161983
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-ttt 253  Q
    |||||||||||| ||||  ||||  |||||||||||||||| || | | ||| || || ||||||||||||||||||||||| |||| |||||||| |||    
T  5162115 ggcttaattacattttttatccttgcattttgaccaactcatgagattagtcatacctcttttaaatcgaacaaaatcgtccctaaattatatgtttttt 5162016  T
Q  254 tgcaattttagtcatatctccctatttccaact 286  Q
    ||||||||||||| |||||||| |||| |||||    
T  5162015 tgcaattttagtcctatctcccaatttacaact 5161983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 156 - 315
Target Start/End: Original strand, 28494845 - 28495003
Alignment:
Q  156 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 254  Q
    ||||||||||||||||||||||  |||||||||||  ||| ||||||||| ||  || ||| |||||||||||||  |||| |||||||| |||||||||    
T  28494845 gcttaattacacttttggtccttacattttgaccagttcaggaaaatggttctgcctctttcaaatcgaacaaaactgtcc-taaactatcatgtttttt 28494943  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttag 315  Q
    ||| |||||||| || || ||||||| |||||||| ||||||| |||| | ||||||||||    
T  28494944 gcagttttagtcctacct-cctattttcaactccagaaacgcagagaagtgacaattttag 28495003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 245
Target Start/End: Complemental strand, 22651857 - 22651767
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 245  Q
    ||||||||||||||||| |||||  ||||||||||| |||||||||||||| ||  |||||| ||||||||||||||||||| ||||||||    
T  22651857 ggcttaattacactttttgtcctcgcattttgaccagctcacgaaaatggttctgcctttttcaaatcgaacaaaatcgtccataaactat 22651767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 315
Target Start/End: Complemental strand, 41834605 - 41834445
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atg-tttt 252  Q
    |||||||||||||||||||||||  ||||||||||| |||||||||||||||||  || ||| | ||||||||||| ||||| |||||||| ||| ||||    
T  41834605 ggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcagatcgaacaaaaccgtcc-taaactatcatgttttt 41834507  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttag 315  Q
    ||||| |||||||| || || ||||||| ||||||   ||||||| |||||| ||| ||||||    
T  41834506 ttgcagttttagtcctacct-cctattttcaactcttgaaacgcagagaaatgacagttttag 41834445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 156 - 315
Target Start/End: Complemental strand, 27307605 - 27307444
Alignment:
Q  156 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt---tt 252  Q
    ||||||||| |||||||||||   |||||||||||  ||||||||||||| ||  || ||| ||||||||||||| ||||| |||||||||||||   ||    
T  27307605 gcttaattagacttttggtccccgcattttgaccagttcacgaaaatggttctccctctttcaaatcgaacaaaaccgtccataaactatatgttttttt 27307506  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttag 315  Q
    ||| | |||||||| || || ||||||| |||||||| ||| ||| |||||| ||| ||||||    
T  27307505 ttgtagttttagtcctacct-cctattttcaactccagaaatgcagagaaatgacatttttag 27307444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 315
Target Start/End: Original strand, 32305843 - 32305977
Alignment:
Q  180 cattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcaattttagtcatatctccctat 278  Q
    |||||||| || ||||||||||| || ||| || ||||||||||||||||||||||| |||||||| ||| |||||||| |||||||| || || | |||    
T  32305843 cattttgatcagctcacgaaaattgttctacctcttttaaatcgaacaaaatcgtccctaaactatcatg-tttttgcagttttagtcctacct-cttat 32305940  T
Q  279 ttccaactccataaacgcacagaaataacaattttag 315  Q
    || |||||||| |||| || |||||| ||| ||||||    
T  32305941 tttcaactccagaaacacagagaaatgacagttttag 32305977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 158 - 245
Target Start/End: Complemental strand, 20266458 - 20266371
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 245  Q
    |||||| |||||||||||||   |||||||||| || |||||||||||| | ||| ||| ||||||||||||||||||| ||||||||    
T  20266458 ttaattgcacttttggtcctcgtattttgaccagcttacgaaaatggtcatgtctctttcaaatcgaacaaaatcgtccctaaactat 20266371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 245
Target Start/End: Complemental strand, 17260766 - 17260676
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 245  Q
    ||||||||| |||||||||||||  |||||||||||| ||||||||||| | ||| || ||| ||||||||||||| | ||| ||||||||    
T  17260766 ggcttaattgcacttttggtcctcgcattttgaccaattcacgaaaatgattctacctctttcaaatcgaacaaaaccatccctaaactat 17260676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 266
Target Start/End: Original strand, 13557017 - 13557103
Alignment:
Q  180 cattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcaattttagtc 266  Q
    ||||||||||| ||||||||||||||| |  || ||| ||||| ||||||||||| |||||||||| |||||||||||| ||||||||    
T  13557017 cattttgaccagctcacgaaaatggtcatgcctctttcaaatcaaacaaaatcgt-cttaaactatcatgttttttgcagttttagtc 13557103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 331
Target Start/End: Original strand, 32697458 - 32697511
Alignment:
Q  278 tttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||||||||||| |||| ||||||||| |||| |||||||||||||||||||||    
T  32697458 tttccaactccagaaacacacagaaatgacaaatttagtccaaccacctatgct 32697511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 16753114 - 16753045
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaac 226  Q
    |||||||||| |||||||| |  |||||||||||||||||||||||||| ||  || ||| |||||||||    
T  16753114 cttaattacatttttggtcatcgcattttgaccaactcacgaaaatggttctgcctctttcaaatcgaac 16753045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 331
Target Start/End: Complemental strand, 22651760 - 22651715
Alignment:
Q  286 tccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||    
T  22651760 tccataaacgcacataaatgacagttttagtccaaccacctatgct 22651715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 28495377 - 28495296
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcc 236  Q
    |||||||||||||||||||||     |||||||||| ||||||||||||||| |  || ||| |||||||||||||| ||||    
T  28495377 ggcttaattacacttttggtctccatattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaattgtcc 28495296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 164189 - 164244
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcct 208  Q
    |||||||||||||||||||||||||    |||||||| |||||||||| |||||||    
T  164189 ttggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcct 164244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 14340479 - 14340554
Alignment:
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatg 329  Q
    |||| ||||| || |||||| ||||||||||||| | ||||  |||||||| ||| ||||||||||||||| ||||    
T  14340479 tgcagttttaatcctatctctctatttccaactctagaaacctacagaaatgacagttttagtccaaccacttatg 14340554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 5819479 - 5819421
Alignment:
Q  150 aaattggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcct 208  Q
    ||||||||||||||||||||||||||||    ||||| || |||||||||| |||||||    
T  5819479 aaattggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 5819421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 315
Target Start/End: Complemental strand, 8647983 - 8647822
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 253  Q
    |||||||||||||||||||||||    ||||| || |||||||||| || ||||  | |||| |||  ||||||||  |||||| || ||| || ||| |    
T  8647983 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 8647884  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttag 315  Q
    |||| |||| |||||| || |   |||| ||||||||||||||| |||||| ||| ||||||    
T  8647883 tgcatttttcgtcataccttctattttcaaactccataaacgcagagaaatgacagttttag 8647822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 24362381 - 24362328
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcct 208  Q
    |||||||||||||||||||||||   |||||| || |||||||||| |||||||    
T  24362381 ggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcct 24362328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 238
Target Start/End: Original strand, 8647437 - 8647521
Alignment:
Q  154 tggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctt 238  Q
    ||||||||||||||||||||||||    ||||| || |||||||||| |||||||  | |||| |||  ||||||||| ||||||    
T  8647437 tggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtcctt 8647521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 19359135 - 19359211
Alignment:
Q  154 tggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 230  Q
    ||||||||||||||||||||||||    ||||| || |||||||||| |||||||  | |||| |||| ||||||||    
T  19359135 tggcttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaa 19359211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 245
Target Start/End: Original strand, 28595182 - 28595270
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 245  Q
    ||||||| |||||||||||||   |||||||||| || || ||||||||| |   | ||| ||| ||||||||||||||| ||||||||    
T  28595182 cttaattgcacttttggtcctcgtattttgaccagcttacaaaaatggtcatgcttctttcaaaacgaacaaaatcgtccctaaactat 28595270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 146; Significance: 7e-77; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 157 - 331
Target Start/End: Complemental strand, 34555926 - 34555750
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt--tttt 254  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  34555926 cttaattacacttttagtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttt 34555827  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| ||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  34555826 gcagttttagtcatatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 34555750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 158 - 331
Target Start/End: Original strand, 21938566 - 21938739
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 257  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21938566 ttaattacacttttggtcttaccattttgatcaactcacgaaaatgatcttatcttttttaaatcgaacaaaatcgtccataaactatatgttttttgca 21938665  T
Q  258 attttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
     |||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  21938666 gttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 21938739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 9992154 - 9992331
Alignment:
Q  155 ggcttaattacacttttggtcctaccatttt-gaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 253  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9992154 ggcttaattacacttttggtcctaccatttttgaccaactcacggaaatggtcctatcttttttaaatcgaacaaaatggtccttaaactatatgttttt 9992253  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||| |||||||| |||||||||||||||||||||| |||| ||||||||| ||| ||||||||| ||||||||||||    
T  9992254 tgcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttagtccgaccacctatgct 9992331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 30786771 - 30786948
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaat-ggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 253  Q
    |||||||||||||||||||| ||  ||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||| ||||||||||||||||    
T  30786771 ggcttaattacacttttggttcttgcattttgaccaactcacgaaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttt 30786870  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||| ||||||    
T  30786871 tgcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacggttttagtccaaccacttatgct 30786948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 150 - 331
Target Start/End: Original strand, 1837500 - 1837681
Alignment:
Q  150 aaattggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgt 249  Q
    |||| |||||||||||||||||||||||  |||||||| |||||||||||| || || ||||| |||||||||||||||||| |||| ||||||||||||    
T  1837500 aaataggcttaattacacttttggtccttgcattttgatcaactcacgaaattgatcatatctcttttaaatcgaacaaaattgtccctaaactatatgt 1837599  T
Q  250 tttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||||||| |||||||||||||||||||||| |||||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  1837600 tttttgcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 1837681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 154 - 329
Target Start/End: Complemental strand, 10279094 - 10278922
Alignment:
Q  154 tggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 253  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  10279094 tggcttaattacacttttgatcctaccgttttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt- 10278996  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatg 329  Q
      || |||||||| ||||||| ||| |||||||||| |||| ||||||||| ||| ||||||||||||||| ||||    
T  10278995 --cagttttagtcctatctccatatatccaactccagaaacacacagaaatgacagttttagtccaaccacatatg 10278922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 155 - 328
Target Start/End: Complemental strand, 16299227 - 16299055
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||| |||||| ||||||||||||||| |||||| ||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||    
T  16299227 ggcttaattatactttttgtcctaccattttgatcaactcgcgaaaatggtcctattttttttaatt-gaacaaaatcgtccttaaactatatgtttttt 16299129  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctat 328  Q
    ||| |||||||| ||||||| |||||||||||||| |||||||||||||| ||||||||||| |||||||||||    
T  16299128 gcagttttagtcctatctccatatttccaactccagaaacgcacagaaatgacaattttagttcaaccacctat 16299055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 37505067 - 37505232
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  37505067 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 37505166  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtcca 319  Q
    |||| |||||||| ||| ||||||||| |||||||| ||| | |||||||| ||| ||||||||||    
T  37505167 tgcagttttagtcctatttccctattttcaactccaaaaatgaacagaaatgacagttttagtcca 37505232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 52336056 - 52335880
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    ||||||||||| |||||||| ||| |||||||||||||||| |||| |||||||| || ||||||||||||||||||||||| |||||||||| ||||||    
T  52336056 ggcttaattactcttttggttctatcattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatttttttt 52335957  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| ||||||||||||||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||| ||||||    
T  52335956 gcagttttagtcatatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacatatgct 52335880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 156 - 331
Target Start/End: Complemental strand, 44954771 - 44954596
Alignment:
Q  156 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttg 255  Q
    ||||||||||||||||||||||  |||||||||||||||| ||||||| || || |||||||||||| ||||||||| ||| ||||||||||||||||||    
T  44954771 gcttaattacacttttggtcctcgcattttgaccaactcatgaaaatgatcataccttttttaaatcaaacaaaatcatccataaactatatgttttttg 44954672  T
Q  256 caattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    || |||||||| |||||||||||||||||||||| |||||||||||||| ||| |||||||| |||||||||||||    
T  44954671 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtcaaaccacctatgct 44954596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 153 - 331
Target Start/End: Complemental strand, 9992703 - 9992525
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 252  Q
    |||||||||||||||||||||||||  ||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  9992703 ttggcttaattacacttttggtccttgcattttgacaaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtgcttaaactatatgtttt 9992604  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||| | |||||| ||||||||||||| |||||||| ||||||  |||||| ||| ||||| |||||||| |||||||    
T  9992603 ttgcagtattagtcctatctccctattttcaactccagaaacgcgtagaaatgacagttttaatccaaccatctatgct 9992525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 157 - 331
Target Start/End: Original strand, 10278550 - 10278725
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttttg 255  Q
    |||||||||||||||||||||  ||||||||||||||||||||| || ||||| || ||||||||||||||||||||||| ||||||||||| |||||||    
T  10278550 cttaattacacttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttg 10278649  T
Q  256 caattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    || |||||||| |||||||| |||| |||||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  10278650 cagttttagtcctatctccccatttgcaactccagaaacgcacataaatgacaattttagtccaaccacctatgct 10278725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 153 - 331
Target Start/End: Complemental strand, 50305333 - 50305152
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactata---tgt 249  Q
    |||| ||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||   | |    
T  50305333 ttggtttaattacacttttggttctaccattttaaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatatttt 50305234  T
Q  250 tttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||||||| |||||||||||||||||||||| ||||||||||||| |||| |||| ||| ||||| |||||| || ||||||    
T  50305233 tttttgcagttttagtcatatctccctattttcaactccataaacacacataaatgacagttttaatccaactacttatgct 50305152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 155 - 329
Target Start/End: Complemental strand, 2868254 - 2868080
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||| ||||  ||||||||||||| |||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||    
T  2868254 ggcttaattacacttttgatcctcacattttgaccaacacacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctacactatatgtttttt 2868155  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatg 329  Q
    ||| ||||||||||||| ||||||||||||||||| ||||||||| || | ||| ||||||||||||||| ||||    
T  2868154 gcagttttagtcatatccccctatttccaactccagaaacgcacataagtgacagttttagtccaaccacatatg 2868080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 157 - 331
Target Start/End: Original strand, 44582059 - 44582233
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgc 256  Q
    |||||||||||||||||||||  |||||||||||||| |||||| |||||||| || ||||||||||||||||||||||  |||| ||||||||||||||    
T  44582059 cttaattacacttttggtccttacattttgaccaactaacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaattatatgttttttgc 44582158  T
Q  257 aattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    | |||||||| ||||||  | |||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  44582159 agttttagtcctatctctttgtttccaactccataaacgcacataaatgacaattttagtccaaccacctatgct 44582233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 158 - 329
Target Start/End: Complemental strand, 8230184 - 8230013
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 257  Q
    ||||||||| ||||||| ||  |||||||||| | |||||||||||||  || || ||||||||||||||||||||||| ||||||||||||||||||||    
T  8230184 ttaattacatttttggttctcgcattttgacctattcacgaaaatggttatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgca 8230085  T
Q  258 attttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatg 329  Q
     ||||||||||||| ||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||    
T  8230084 gttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatg 8230013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 149 - 331
Target Start/End: Complemental strand, 444103 - 443921
Alignment:
Q  149 aaaattggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 248  Q
    |||||||||||||||| ||||||| || |  ||||||||||||||||||||| | ||| || || ||||||||||||||||||||| | |||||||||||    
T  444103 aaaattggcttaattatacttttgatctttgcattttgaccaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgttcctaaactatatg 444004  T
Q  249 ttttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||||||| |||||||| ||||||||||||||||| ||||||||||| || |||| ||| ||||||||||||||||||||||    
T  444003 ttttttgcagttttagtcctatctccctatttccaattccataaacgcgcataaatgacagttttagtccaaccacctatgct 443921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 153 - 331
Target Start/End: Original strand, 23340181 - 23340359
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 252  Q
    |||||||||||||||||||| || |  ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||  | |||||||||| ||||    
T  23340181 ttggcttaattacacttttgatcattgcattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgctcataaactatatatttt 23340280  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||| |||||||||||||||| |||||||||||||| |||||| ||||||| ||| ||||||| ||||||| ||||||    
T  23340281 ttgcagttttagtcatatctccttatttccaactccagaaacgctcagaaatgacagttttagttcaaccacatatgct 23340359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 147 - 331
Target Start/End: Complemental strand, 44582613 - 44582427
Alignment:
Q  147 ataaaattggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactata 246  Q
    |||| |||| |||||||||||||||||| |||||||||||| |||||||||||||||||| |||| |||| |||||||||||||||||| ||||||||||    
T  44582613 ataatattgacttaattacacttttggttctaccattttgatcaactcacgaaaatggtcatatcattttcaaatcgaacaaaatcgtctttaaactata 44582514  T
Q  247 tgtt-ttttgcaattttagtcatatctccctatttccaactcc-ataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||| ||||||| |||||||| | ||||||||||| || |||| | |||||||||||||| ||| ||||||||||||||||||||||    
T  44582513 tgtttttttgcagttttagtcttgtctccctattttcagctccaaaaaacgcacagaaatgacagttttagtccaaccacctatgct 44582427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 158 - 331
Target Start/End: Original strand, 44954229 - 44954402
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 257  Q
    ||||||||| |||| ||||  |||||||||||||||||||||||||||| || |||||||||||| |||||||||||| ||||| |||||||||||||||    
T  44954229 ttaattacattttttgtccacccattttgaccaactcacgaaaatggtcataccttttttaaatccaacaaaatcgtctttaaattatatgttttttgca 44954328  T
Q  258 attttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
     |||||||| |||||| || |||||||||||| |||||||||||||| ||| ||||||||||||||| ||||||    
T  44954329 gttttagtcgtatctctctgtttccaactccagaaacgcacagaaatgacagttttagtccaaccacatatgct 44954402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 158 - 331
Target Start/End: Original strand, 37421163 - 37421338
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg--ttttttg 255  Q
    |||||||||||||||||| |  |||||||||||| |||||||| ||||| || || ||||||||||||||||||||||| |||||||||||  |||||||    
T  37421163 ttaattacacttttggtctttgcattttgaccaattcacgaaattggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttttg 37421262  T
Q  256 caattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    || |||||||||||| |||||||||||||||||| |||||||||||||| ||| |||||||| |||||||||||||    
T  37421263 cagttttagtcatatttccctatttccaactccaaaaacgcacagaaatgacagttttagtctaaccacctatgct 37421338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 155 - 329
Target Start/End: Original strand, 4080021 - 4080195
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||| ||||||||||||||||||  ||| ||||||||||||||||| || || || || ||||||||||||||||||||||| |||||||||||||||||    
T  4080021 ggctcaattacacttttggtccttgcatcttgaccaactcacgaaattgatcgtacctattttaaatcgaacaaaatcgtccctaaactatatgtttttt 4080120  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatg 329  Q
     || ||||||||||||||||||||||||||||| | ||||||||| |||| ||| |||||||||||||| |||||    
T  4080121 acagttttagtcatatctccctatttccaactctagaaacgcacaaaaatgacagttttagtccaaccatctatg 4080195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 158 - 331
Target Start/End: Complemental strand, 17641912 - 17641734
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-----atgtttt 252  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||| || || ||||||||||||||||||||||| ||||||||      | ||||    
T  17641912 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaactatttttattttttt 17641813  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||| |||||||| |||||||||||||||||||||| |||||||||||||| ||| ||||||| ||||||||||||||    
T  17641812 ttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagttcaaccacctatgct 17641734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 29438930 - 29439107
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 253  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| ||||||| ||| |||||    
T  29438930 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactaaatgtttttt 29439029  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||| |||||||| |||||| |||||| ||| || | |||| |||| |||||||| ||||||||||||||||||||||    
T  29439030 tgcagttttagtcctatctctctattttcaattcaaaaaacacacaaaaataacagttttagtccaaccacctatgct 29439107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 157 - 321
Target Start/End: Original strand, 2867913 - 2868077
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgc 256  Q
    |||||||||| |||||||| |  |||||||||||||||||||||||| || ||||| |||||||||||||||||| ||| ||||||||||||||||||||    
T  2867913 cttaattacaattttggtcatcgcattttgaccaactcacgaaaatgatcatatctcttttaaatcgaacaaaattgtcgttaaactatatgttttttgc 2868012  T
Q  257 aattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaac 321  Q
    | |||||||||||| ||||||| || ||||||| ||||||||| |||| ||| ||||||||||||    
T  2868013 agttttagtcatatttccctatctctaactccaaaaacgcacataaatgacagttttagtccaac 2868077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 155 - 332
Target Start/End: Original strand, 34555379 - 34555558
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg--tttt 252  Q
    |||||||||||||||||||||||  ||||||||| ||||| ||||| |||| ||| || ||||||||||||||||||||||| |||||||||||  ||||    
T  34555379 ggcttaattacacttttggtccttgcattttgactaactcgcgaaattggtgctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 34555478  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgctt 332  Q
    || || |||||||| |||||||||||||||||||||| |||||||||||||| | | ||||||| ||||||| |||||||    
T  34555479 ttacagttttagtcctatctccctatttccaactccagaaacgcacagaaatgatagttttagttcaaccacatatgctt 34555558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 156 - 331
Target Start/End: Original strand, 16298683 - 16298858
Alignment:
Q  156 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttg 255  Q
    ||||||||||| |||||| |||  ||||||||||||||||||||| ||||| || || ||||||||||||||||||||||| ||||||||||||||||||    
T  16298683 gcttaattacatttttggcccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttg 16298782  T
Q  256 caattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    || |||||||| ||||| ||||||||||||||   ||||||| | |||| | | ||||||||||||||||||||||    
T  16298783 cagttttagtcctatctacctatttccaactctggaaacgcaaataaatgatagttttagtccaaccacctatgct 16298858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 153 - 331
Target Start/End: Complemental strand, 37505615 - 37505438
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 252  Q
    |||||||||||| | ||||||||||   |||||||||||||||||||| || || ||||| ||||||| | ||||||||||||| |||||||||||||||    
T  37505615 ttggcttaattatatttttggtccttttattttgaccaactcacgaaattgatcatatctcttttaaaacaaacaaaatcgtccataaactatatgtttt 37505516  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    | ||| |||||||| ||||||||||||| |||||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  37505515 t-gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgct 37505438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 8229637 - 8229816
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg---ttt 251  Q
    |||||||||||||||||| ||||  |||||||| ||||||||||||||| | |||  | |||||||||||| |||||||||  |||||||||||   |||    
T  8229637 ggcttaattacacttttgatcctcacattttgatcaactcacgaaaatgattctacatcttttaaatcgaataaaatcgtctctaaactatatgtttttt 8229736  T
Q  252 tttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||||| |||||||| |||||||||||||| ||||||| |||||||||||||| ||| |||||||||||| || ||||||    
T  8229737 tttgcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttagtccaactacatatgct 8229816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 158 - 315
Target Start/End: Original strand, 45048158 - 45048314
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 257  Q
    ||||||||||||||||||||  |||||||||||||| ||||||||||| ||| || |||||||| |||||||||||||| ||||||||||||||||||||    
T  45048158 ttaattacacttttggtccttgcattttgaccaacttacgaaaatggttctacctcttttaaattgaacaaaatcgtccataaactatatgttttttgca 45048257  T
Q  258 attttagtcatatctccctatttccaactccataaacgcacagaaataacaattttag 315  Q
     |||||||| || || | ||||| |||||||| ||||||| |||||||||| ||||||    
T  45048258 gttttagtcctacct-catattttcaactccagaaacgcatagaaataacagttttag 45048314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 158 - 331
Target Start/End: Original strand, 6224700 - 6224875
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaa--ctatatgttttttg 255  Q
    ||||||||| ||||| ||||| ||||||||||||||||  |||||||| ||   ||||||||||||||||||||||||||||||   ||||| ||||||     
T  6224700 ttaattacatttttgatcctatcattttgaccaactcataaaaatggttcttgtttttttaaatcgaacaaaatcgtccttaaattatatatatttttta 6224799  T
Q  256 caattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    || |||||||| |||||| ||||||||||||||| ||||||||| |||| ||| |||||||| |||||||||||||    
T  6224800 cagttttagtcttatctctctatttccaactccagaaacgcacataaatgacagttttagtcaaaccacctatgct 6224875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 158 - 289
Target Start/End: Complemental strand, 29439465 - 29439333
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt--ttttg 255  Q
    |||||| |||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  29439465 ttaattgcacttttggtcccaccattttgatcaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttttg 29439366  T
Q  256 caattttagtcatatctccctatttccaactcca 289  Q
    ||  ||||||| ||||| |||||||| |||||||    
T  29439365 cagatttagtcctatct-cctatttcaaactcca 29439333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 157 - 328
Target Start/End: Original strand, 1744330 - 1744500
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt-g 255  Q
    ||||||||||||||||||| |   |||||||| |||||||| ||||| ||||| ||||||  | || || |||||||||| |||||||||| |||||| |    
T  1744330 cttaattacacttttggtcttcgtattttgacaaactcacgtaaatgatcctaccttttt--agtcaaataaaatcgtccctaaactatatatttttttg 1744427  T
Q  256 caattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctat 328  Q
    || ||||||||||||||||||||||||||||||| ||||||||| |||| ||| |||||||||||||||||||    
T  1744428 cagttttagtcatatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctat 1744500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 193 - 329
Target Start/End: Original strand, 17641403 - 17641539
Alignment:
Q  193 tcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcaattttagtcatatctccctatttccaactccataa 292  Q
    |||||||||||||| || ||||||||||||||||||||| || ||||||||||| |||||||| | |||||||  |||||||||||||||||||||| ||    
T  17641403 tcacgaaaatggtcataccttttttaaatcgaacaaaattgttcttaaactatacgttttttgtagttttagttctatctccctatttccaactccagaa 17641502  T
Q  293 acgcacagaaataacaattttagtccaaccacctatg 329  Q
    ||||||| |||| ||| ||||||| ||||||||||||    
T  17641503 acgcacataaatgacagttttagttcaaccacctatg 17641539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 158 - 257
Target Start/End: Complemental strand, 37421488 - 37421388
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatctt-ttttaaatcgaacaaaatcgtccttaaactatatgttttttgc 256  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  37421488 ttaattacacttttagtcataccattttgaccaactcacgaaaatggtcctatctttttttaaatcgaacaaaatcgtccttaaactatatgatttttgc 37421389  T
Q  257 a 257  Q
    |    
T  37421388 a 37421388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 155 - 254
Target Start/End: Complemental strand, 30787344 - 30787245
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  30787344 ggcttaattacacttttgatcctaccatttagatcaactcacgaaaatggtcatatctttttaaaatcgaacaaaatcgtccttaaactatatgtttttt 30787245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 158 - 315
Target Start/End: Original strand, 39485068 - 39485224
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 257  Q
    ||||||||||||||||||||  ||||||||| | |||||||||||||||||| || ||| ||||||||||||||||||| ||||||||||||||||||||    
T  39485068 ttaattacacttttggtcctcgcattttgactagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactatatgttttttgca 39485167  T
Q  258 attttagtcatatctccctatttccaactccataaacgcacagaaataacaattttag 315  Q
     |||||||| ||||| ||||||| ||||| || |||| || ||| || ||| ||||||    
T  39485168 gttttagtcctatct-cctattttcaacttcagaaacacagagagatgacagttttag 39485224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 50926787 - 50926611
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    ||||||||||||||||||||| |  ||||||||||| ||||||||||||||||  ||| ||| ||||||||||||| ||||| ||||||||   ||||||    
T  50926787 ggcttaattacacttttggtcatcgcattttgaccagctcacgaaaatggtcccgtctctttcaaatcgaacaaaaccgtccctaaactatcattttttt 50926688  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||| |  | |||||||| ||||||||||||| |||| ||||   | ||||||||||||||||||||||    
T  50926687 gcagttttagtccttaccccctattttcaactccataaacacacataaatggtagttttagtccaaccacctatgct 50926611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 154 - 331
Target Start/End: Complemental strand, 9833699 - 9833522
Alignment:
Q  154 tggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttt 252  Q
    ||||||||||  ||||||| ||||   | |||||||||||||||||||| ||| |  || ||| ||||||||||||||||||| |||| ||| |||||||    
T  9833699 tggcttaattgtacttttgatccttgtactttgaccaactcacgaaaatagtcatgcctctttcaaatcgaacaaaatcgtccctaaaatattatgtttt 9833600  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||| |||||||| || | |||||||| |||||||| |||||||||||||||||| ||||||||| ||||||||||||    
T  9833599 ttgcagttttagtcctacc-ccctattttcaactccagaaacgcacagaaataacatttttagtcctaccacctatgct 9833522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 156 - 331
Target Start/End: Original strand, 23526659 - 23526833
Alignment:
Q  156 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttg 255  Q
    ||||| ||||||||||||||||  ||||||||||| |||||||||||||||||  || ||||||||||||||||||| ||| || |||||   |||||||    
T  23526659 gcttagttacacttttggtcctcacattttgaccagctcacgaaaatggtcctgcctcttttaaatcgaacaaaatcatccctagactatcatttttttg 23526758  T
Q  256 caattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    || ||||||||    | |||||||| |||||||| |||||||||||||| || | |||||| |||||| |||||||    
T  23526759 cagttttagtccctgccccctattttcaactccaaaaacgcacagaaatgac-agtttagtacaaccatctatgct 23526833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 29021411 - 29021234
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat--atgtttt 252  Q
    ||||||||| |||||||||||||  ||||||||||| |||||||||||| || |  || ||| ||||||||||||||||||| |||| |||    |||||    
T  29021411 ggcttaattgcacttttggtcctcacattttgaccagctcacgaaaatgttcatgcctctttcaaatcgaacaaaatcgtccctaaattatcacggtttt 29021312  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||| |||||||| || | |||||||| |||||||| ||||||||| |||| ||| |||| |||||||||||||||||    
T  29021311 ttgcagttttagtctta-ccccctattttcaactccagaaacgcacataaatgacagtttttgtccaaccacctatgct 29021234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 50304441 - 50304532
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 248  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||| || || ||||||||||||||||||||||  |||||||||||    
T  50304441 cttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctctaaactatatg 50304532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 157 - 331
Target Start/End: Original strand, 50926232 - 50926408
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat--atgtttttt 254  Q
    |||||||||| |||||||||| |||||||||||| |||||||||||  || || || ||| ||||||||||||||||||| ||||||||   | ||||||    
T  50926232 cttaattacagttttggtcctcccattttgaccagctcacgaaaataatcatacctctttcaaatcgaacaaaatcgtccctaaactatcattttttttt 50926331  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||| |  |  ||||||| |||||||| |||| |||| ||||   | ||||||||||||||||||||||    
T  50926332 gcagttttagtccttacctcctattttcaactccagaaacacacataaatggtagttttagtccaaccacctatgct 50926408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 158 - 305
Target Start/End: Complemental strand, 45048678 - 45048532
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 256  Q
    ||||||||||||||||||||  |||||||||||  |||||||||||||| || || |||  |||||||||||| ||||| |||||||| |||||||||||    
T  45048678 ttaattacacttttggtcctcgcattttgaccagttcacgaaaatggtcatacctctttccaatcgaacaaaaccgtcc-taaactatcatgttttttgc 45048580  T
Q  257 aattttagtcatatctccctatttccaactccataaacgcacagaaata 305  Q
    | |||||||| || || ||||||| |||||||| ||||||| |||||||    
T  45048579 agttttagtcctacct-cctattttcaactccagaaacgcagagaaata 45048532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 315
Target Start/End: Complemental strand, 44802717 - 44802557
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 253  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||| ||||| |  || ||| |||  |||||||||||||| |||||||| ||||||||    
T  44802717 ggcttaattacacttttggtccttgcattttgaccagctcacgaaagtggtcatgcctctttcaaacggaacaaaatcgtccctaaactatcatgttttt 44802618  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttag 315  Q
    |||| |||||||  || || ||||||| |||||||| |||| || | |||| ||||||||||    
T  44802617 tgcagttttagttctacct-cctattttcaactccagaaacacagaaaaatgacaattttag 44802557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 155 - 315
Target Start/End: Complemental strand, 17088685 - 17088526
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||||||||  |||||||| || ||||||||||||||| |  || ||| ||||| ||||||| ||||| |||||||||| ||||||    
T  17088685 ggcttaattacacttttggtcctctcattttgaacagctcacgaaaatggtcatgcctctttcaaatcaaacaaaaccgtccctaaactatatatttttt 17088586  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttag 315  Q
    ||| |||||||  || || ||||||| ||| || | ||||||| |||||| ||| ||||||    
T  17088585 gcagttttagttctacct-cctattttcaaatctagaaacgcagagaaatgacagttttag 17088526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 249 - 331
Target Start/End: Original strand, 50304876 - 50304958
Alignment:
Q  249 ttttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||| |||| ||||  |||||||| ||||||||||||||||    
T  50304876 ttttttgcagttttagtcatatctccctatttcaaactccataaacacacaaaaatggcaattttaatccaaccacctatgct 50304958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 157 - 330
Target Start/End: Original strand, 44291303 - 44291477
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atg--ttttt 253  Q
    ||||||| |||||||||||||  ||||||||||| ||||||||||||||  |  || ||| |||| |||||||||||||| |||||||| |||  |||||    
T  44291303 cttaattgcacttttggtcctcacattttgaccagctcacgaaaatggttatgcctctttcaaattgaacaaaatcgtccataaactatcatgttttttt 44291402  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgc 330  Q
    |||| ||||||||||| || ||| ||| ||| |||| ||||||||| ||||| || ||||||||  |||||||||||    
T  44291403 tgcagttttagtcatacct-cctgttttcaaatccagaaacgcaca-aaatagcagttttagtcgtaccacctatgc 44291477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 153 - 331
Target Start/End: Original strand, 29020878 - 29021056
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttt 251  Q
    ||||||||||| ||| | ||||| |   ||||||| || ||||  ||||||||| | ||| ||||||||||||||||||| |||||||| ||| ||||||    
T  29020878 ttggcttaattgcacatatggtcttcgtattttgatcagctcataaaaatggtcatgtctcttttaaatcgaacaaaatcatccttaaattatcatgttt 29020977  T
Q  252 tttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||||||||||||  || |||||||||| || ||||| ||||||||| ||||  || ||||||||| |||  |||||||    
T  29020978 tttgcaattttagtgtta-ctccctattttcacctccaaaaacgcacataaatgtcagttttagtcctacccgctatgct 29021056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 262
Target Start/End: Original strand, 25274754 - 25274863
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 252  Q
    ||||| ||||| |||||||||||||  ||||||||||| ||||||||||||||| |  || ||| ||||||||||||| ||| | ||||||| |||||||    
T  25274754 ttggcataattgcacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgttcctaaactacatgtttt 25274853  T
Q  253 ttgcaatttt 262  Q
    ||||| ||||    
T  25274854 ttgcattttt 25274863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 249 - 331
Target Start/End: Complemental strand, 30787224 - 30787142
Alignment:
Q  249 ttttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||||| ||||||||||| ||| ||||||||| |||||||||||| ||| |||||| ||| |||||||||||| |||||||||    
T  30787224 tttttttcaattttagtcctatttccctattttcaactccataaatgcagagaaatgacagttttagtccaactacctatgct 30787142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 157 - 266
Target Start/End: Complemental strand, 23527074 - 23526965
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgc 256  Q
    |||||||| ||||||| ||||  |||||||| || |||| |||||||||| |  |||||||||||||||||||| ||||  ||||||||   ||||||||    
T  23527074 cttaattatacttttgatcctcacattttgatcagctcatgaaaatggtcatgccttttttaaatcgaacaaaaccgtctctaaactatcatttttttgc 23526975  T
Q  257 aattttagtc 266  Q
    | ||||||||    
T  23526974 agttttagtc 23526965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 304
Target Start/End: Complemental strand, 44291831 - 44291708
Alignment:
Q  181 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcaattttagtcatatctccctatt 279  Q
    |||||||||| |||| |||||||||| | ||| |||||||||||| |||||||||    |||||| |||||||||||| |||||||| || | |||||||    
T  44291831 attttgaccagctcatgaaaatggtcatgtctcttttaaatcgaataaaatcgtcacctaactatcatgttttttgcagttttagtccta-ccccctatt 44291733  T
Q  280 tccaactccataaacgcacagaaat 304  Q
    | |||||||| |||| || ||||||    
T  44291732 ttcaactccagaaacacatagaaat 44291708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 17088146 - 17088326
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atg----- 248  Q
    |||||||||||||| |||||| |  ||||||||||| ||||||||||||||  |  || ||| ||||||||||||| ||||| |||||||| |||         
T  17088146 ggcttaattacactgttggtcatcgcattttgaccagctcacgaaaatggttttgcctctttcaaatcgaacaaaaccgtcc-taaactatcatgttttt 17088244  T
Q  249 ttttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||||||||||||||||| || || ||||||| ||||| || ||| ||| ||||||  || |||||| || ||| ||||||||    
T  17088245 ttttttgcaattttagtcctacct-cctattttcaacttcagaaatgcagagaaatggcagttttagacctacctcctatgct 17088326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 228
Target Start/End: Complemental strand, 39843570 - 39843497
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaa 228  Q
    ||||| |||||||||| ||||||  ||||| ||||||||||||||| |||||||  |||||| |||||||||||    
T  39843570 ggctttattacactttcggtcctcgcatttagaccaactcacgaaattggtcctgcctttttcaaatcgaacaa 39843497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 254
Target Start/End: Original strand, 50419393 - 50419490
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttt 254  Q
    |||||| |||||||||||||  |||||  |||||||||| ||||||||| | ||||||| |||||||||||| | ||||||  ||||| |||||||||    
T  50419393 ttaattgcacttttggtcctcgcatttaaaccaactcacaaaaatggtcatgtctttttcaaatcgaacaaagtagtccttgtactatcatgtttttt 50419490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 155 - 317
Target Start/End: Original strand, 48173748 - 48173911
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atg-tttt 252  Q
    |||||||||  || ||||||||   |||||||||||  |||| |||||||| ||  || ||| |||||||||||||||| || |||| ||| ||| ||||    
T  48173748 ggcttaattgtacctttggtccacgcattttgaccagttcacaaaaatggttctgcctctttcaaatcgaacaaaatcgaccctaaattatcatgttttt 48173847  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtc 317  Q
    ||||| ||||||||||| | |||||||| |||||||| |||| | || |||| ||| ||||||||    
T  48173848 ttgcacttttagtcata-ccccctattttcaactccaaaaactctcataaatgacagttttagtc 48173911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 155 - 262
Target Start/End: Complemental strand, 50419806 - 50419698
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 253  Q
    ||||||||| ||||||||||| |  ||||| ||||||||||||||| |||||||  |||||| |||| ||||||||  |||| |  ||||| ||||||||    
T  50419806 ggcttaattgcacttttggtcatcgcatttagaccaactcacgaaattggtcctgcctttttaaaattgaacaaaacggtccctgtactatcatgttttt 50419707  T
Q  254 tgcaatttt 262  Q
    |||| ||||    
T  50419706 tgcactttt 50419698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 274
Target Start/End: Complemental strand, 36229486 - 36229406
Alignment:
Q  195 acgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcaattttagtcatatctcc 274  Q
    |||||||||||| | ||| | |||||| ||||||| |  |||||||||||| |||||||||||| ||||||||||| ||||    
T  36229486 acgaaaatggtcttgtctctattaaattgaacaaactgatccttaaactatcatgttttttgcagttttagtcatacctcc 36229406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 269
Target Start/End: Original strand, 52233733 - 52233853
Alignment:
Q  150 aaattggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atg 248  Q
    |||| ||||||||||||||||| |||||    |||| ||||||| |||||| |||| ||| | |||| || |||||||||   |||| || ||||| |||    
T  52233733 aaataggcttaattacacttttcgtcctcgggttttaaccaacttacgaaattggtgctacccttttcaagtcgaacaaagcagtccctatactatcatg 52233832  T
Q  249 ttttttgcaattttagtcata 269  Q
    |||||||||||||| ||||||    
T  52233833 ttttttgcaattttggtcata 52233853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 315
Target Start/End: Complemental strand, 29307493 - 29307326
Alignment:
Q  149 aaaattggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-at 247  Q
    |||| |||||||||| |||||||||||||    |||||||| |||||||||| |||||||  | |||| |||  ||||||||  |||||| || ||| ||    
T  29307493 aaaagtggcttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 29307394  T
Q  248 gttttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttag 315  Q
     ||| ||||| |||| ||| || ||||   |||| ||||||| ||||||| |||||| ||| ||||||    
T  29307393 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 29307326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 262
Target Start/End: Complemental strand, 52235214 - 52235106
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 253  Q
    |||||||||||||||||| ||||   ||||| |||||||||||||| || ||||  | |||| ||||||||| ||   |||| || ||||| |||||| |    
T  52235214 ggcttaattacacttttgatcctcagattttaaccaactcacgaaactgatcctgcccttttcaaatcgaacgaagcagtccctatactatcatgtttct 52235115  T
Q  254 tgcaatttt 262  Q
    |||||||||    
T  52235114 tgcaatttt 52235106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 141; Significance: 7e-74; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 155 - 326
Target Start/End: Complemental strand, 15256377 - 15256203
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt---t 251  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||   |    
T  15256377 ggcttaattacacttttggtcctaccattttgaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 15256278  T
Q  252 tttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacct 326  Q
    |||||| || |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  15256277 tttgcagttctagtcatatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacct 15256203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 153 - 331
Target Start/End: Original strand, 18049588 - 18049767
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttt 251  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  18049588 ttggctcaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 18049687  T
Q  252 tttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||||| |||||||| |||||||||||||||||||||| |||||||||||||| ||| ||||| ||||||||||||||||    
T  18049688 tttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttaatccaaccacctatgct 18049767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 34799079 - 34799256
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 253  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||    
T  34799079 ggcttaattacacttttggtcataccattttgaccaactcatgaaaatggtcctattttttttaaatcgaacaaagtcgtccttaaactatatgtttttt 34799178  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||| |||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  34799179 tgcagttttagtcctatctccctatttccaactccataaacgcacataaatgacaattttagtccaaccacctatgct 34799256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 153 - 331
Target Start/End: Original strand, 9796724 - 9796902
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 252  Q
    |||||||||||||||||||||||||  ||||||||||||||||| ||| |||||||| || ||||||||||||||||||| ||| |||||||||||||||    
T  9796724 ttggcttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcatccataaactatatgtttt 9796823  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  9796824 ttgcagttttagtcatatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 9796902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 158 - 331
Target Start/End: Complemental strand, 18428305 - 18428131
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-ttttgc 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18428305 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgc 18428206  T
Q  257 aattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    | ||||| || |||||||||||||||||||||| ||||||||| |||| ||| |||||||||||||| |||||||    
T  18428205 agttttactcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccatctatgct 18428131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 157 - 331
Target Start/End: Original strand, 28254427 - 28254602
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttttg 255  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||    
T  28254427 cttaattacacttttggtcctaccattttgatcaactcacgaaaatggtcctatctattttaaattgaacaaaatcgtccttaaactatatgtttttttg 28254526  T
Q  256 caattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    || |||||||| |||||||||||||||||||||| ||||||| |||||| ||| ||||||||||||||||||||||    
T  28254527 cagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacatttttagtccaaccacctatgct 28254602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 151 - 331
Target Start/End: Complemental strand, 9797277 - 9797096
Alignment:
Q  151 aattggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt 250  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||    
T  9797277 aattggattaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcaaataaaatcgtccttaaactatatgtt 9797178  T
Q  251 -ttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
     ||||||| |||||||  ||||| ||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||    
T  9797177 tttttgcagttttagttctatctacctatttccaactccataaacgcacagaaatgacagttttagtctaaccacctatgct 9797096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 600044 - 599868
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  600044 ggcttaattacacttttggtcctaccattttgaccaactaacgaaaatggtcatatcttttttaaatggaacaaaatcgtccttaaactatatgtttttt 599945  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||| |||||| |||||||||| |||| ||||||| |||||| ||| ||||||||||||||| ||||||    
T  599944 gcagttttagtcttatctctctatttccaattccagaaacgcatagaaatgacagttttagtccaaccacttatgct 599868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 157 - 331
Target Start/End: Original strand, 2208716 - 2208891
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat-gttttttg 255  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||     
T  2208716 cttaattacacttttgatcctaccattttgaccaactcacgaaaattgtcctatcttttttaaatcgaacaaaatcgtccttaaactatatattttttta 2208815  T
Q  256 caattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||||||||||||||||||||||| ||| |||| ||||| |||||||||| | ||||||||||||||||||||||    
T  2208816 caattttagtcatatctccctattttcaattccagaaacgtacagaaataatagttttagtccaaccacctatgct 2208891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 16578642 - 16578466
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||| ||||||||||||||| || ||||||||||||||||||    
T  16578642 ggcttaattacacttttggtcctaccattttgacgaactcacgaaaatggttatatctttttcaaatcgaacaaaatcatcattaaactatatgtttttt 16578543  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||| |||||||||||||||||| | | |||||||||||||| ||| ||||||||||||||||||||||    
T  16578542 gcagttttagtcctatctccctatttccaacactagaaacgcacagaaatgacagttttagtccaaccacctatgct 16578466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 156 - 331
Target Start/End: Complemental strand, 28254971 - 28254796
Alignment:
Q  156 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttg 255  Q
    ||||||||||||||||||||||  ||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| ||||||||||  ||||||    
T  28254971 gcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatataatttttg 28254872  T
Q  256 caattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    || |||||||| |||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  28254871 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 28254796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 35427358 - 35427182
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||| ||| || ||||||| ||||||||||||||| |||| ||||| ||||||    
T  35427358 ggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttctacctcttttaaaccgaacaaaatcgtccctaaattatatatttttt 35427259  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| ||||||||  |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  35427258 gcagttttagtcccatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 35427182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 155 - 287
Target Start/End: Original strand, 41260271 - 41260403
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41260271 ggcttaattacacttttggtcctaccattttgaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 41260370  T
Q  255 gcaattttagtcatatctccctatttccaactc 287  Q
    ||| |||||||| ||||||||||||||||||||    
T  41260371 gcagttttagtcttatctccctatttccaactc 41260403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 156 - 331
Target Start/End: Original strand, 42035773 - 42035948
Alignment:
Q  156 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttg 255  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||| ||| || ||||||||||||||||||||||| |||||||||| | |||||    
T  42035773 gcttaattacacttttggtcctcacattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactatatatattttg 42035872  T
Q  256 caattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||||||||| |||||||||||||| ||||||||||||||||| |||| ||| ||||||||||||||| ||||||    
T  42035873 caattttagtcctatctccctatttctaactccataaacgcacaaaaatgacagttttagtccaaccacatatgct 42035948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 153 - 331
Target Start/End: Complemental strand, 7911164 - 7910986
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 252  Q
    |||||||||||||||||||  ||||  |||||||||||||||||||||||||| ||| || ||||||||||||||||||||||| |||||||||| ||||    
T  7911164 ttggcttaattacacttttaatcctcgcattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccctaaactatatatttt 7911065  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||| ||||||||||||| | |||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  7911064 ttgcagttttagtcatatccctctattttcaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 7910986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 155 - 317
Target Start/End: Original strand, 5730817 - 5730979
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5730817 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatagtcctatcttttttaaatcaaacaaaatcgtccttaaactatatgtttttt 5730916  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtc 317  Q
    ||  |||||||| || ||||||||||  ||||||| ||||| |||||||| ||| ||||||||    
T  5730917 gctgttttagtcctacctccctatttttaactccagaaacgtacagaaatgacagttttagtc 5730979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 158 - 331
Target Start/End: Complemental strand, 18050134 - 18049961
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 257  Q
    ||||||||| ||||||||||  ||||||||||||||||||||| ||||| || || ||||||||||||||||||||||| |||||||||||||||||||     
T  18050134 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgct 18050035  T
Q  258 attttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
     ||||| || ||||||||||||| |||||||| |||||||||||||||||| ||||| ||||||||||||||||    
T  18050034 gttttaatcctatctccctattttcaactccagaaacgcacagaaataacagttttactccaaccacctatgct 18049961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 155 - 327
Target Start/End: Original strand, 599532 - 599704
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||| ||||||||||  ||||||||||||||||||||| ||||| || || ||||||||||||||||||| ||| |||| ||||||||||||    
T  599532 ggcttaattacatttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcatccctaaattatatgtttttt 599631  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccaccta 327  Q
    ||| ||||||||||||||||||||||||||||||| ||||||||| |||| ||| |||||||||| |||||||    
T  599632 gcagttttagtcatatctccctatttccaactccagaaacgcacacaaatgacagttttagtccagccaccta 599704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 34799629 - 34799453
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||||||||  |||||||||||| | |||||| |||||||| || |||||||||||||||||| |||| |||||||||||||||||    
T  34799629 ggcttaattacacttttggtcctttcattttgaccaattaacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatgtttttt 34799530  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||| ||||| |||||||||||||||||||||||||| |||| | | ||||||| ||||||||||||||    
T  34799529 gcagttttagtcctatcttcctatttccaactccataaacgcacataaatgatagttttagttcaaccacctatgct 34799453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 155 - 293
Target Start/End: Original strand, 15255853 - 15255991
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||||||||    
T  15255853 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 15255952  T
Q  255 gcaattttagtcatatctccctatttccaactccataaa 293  Q
    ||| |||||||| ||||||||||||||||||||||||||    
T  15255953 gcagttttagtcctatctccctatttccaactccataaa 15255991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 41260807 - 41260631
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||| |||||||||| |  |||||||| |||||||||||| || || || || ||||||||||||||||||||||| |||||||||||||||||    
T  41260807 ggcttaattatacttttggtcattgcattttgatcaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 41260708  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||| ||||||||||||| |||||||| ||||||||| |||| ||| ||||||||||||||| ||||||    
T  41260707 gcagttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacttatgct 41260631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 157 - 331
Target Start/End: Complemental strand, 5731356 - 5731182
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgc 256  Q
    |||||||| |||||| ||| |  |||||||||||||||| |||| |||| ||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  5731356 cttaattatactttttgtcattgcattttgaccaactcaggaaattggttctaccttttataaatcgaacaaaatcgtccataaactatatgttttttgc 5731257  T
Q  257 aattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    | |||||||  ||||||||||||| |||||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  5731256 agttttagttctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 5731182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 158 - 329
Target Start/End: Complemental strand, 35694421 - 35694242
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactata--------tgt 249  Q
    |||||||||||||||||||| |||||||||| ||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||        | |    
T  35694421 ttaattacacttttggtccttccattttgactaactcacaaaaatggtcctacattttttaaatcgaacaaaatcgtccttaaactatattttttttttt 35694322  T
Q  250 tttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatg 329  Q
    |||||||  |||||||| |||||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||    
T  35694321 tttttgctgttttagtcttatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatg 35694242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 16578108 - 16578285
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||| ||||||| ||  ||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |||| ||||||||||||    
T  16578108 ggcttaattacatttttggttcttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaattatatgtttttt 16578207  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgc-acagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||| ||| |||||||||||||||||||||| |||||| | | ||| |||| |||||||||||||| |||||||    
T  16578208 gcagttttggtcctatctccctatttccaactccagaaacgcaaaaaaaaaaacagttttagtccaaccatctatgct 16578285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 155 - 330
Target Start/End: Complemental strand, 6115657 - 6115481
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-ttt 253  Q
    |||||||||| ||||||||||||   |||||||||||||| ||||| |||||||| || ||||||||||||||||||||||| ||||||||||||| |||    
T  6115657 ggcttaattatacttttggtccttgtattttgaccaactcgcgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 6115558  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgc 330  Q
    || | |||||||  ||||||| ||||| |||||| | |||||||||||||| ||| ||||||||||||||| |||||    
T  6115557 tgtagttttagttctatctccttattttcaactcaagaaacgcacagaaatgacagttttagtccaaccacttatgc 6115481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 156 - 331
Target Start/End: Original strand, 35693869 - 35694046
Alignment:
Q  156 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgt--tttt 253  Q
    ||||||||||||||||| ||||  |||||||||||| | ||||||||| | ||| || |||||||||||| |||||||||| |||||||||| |  ||||    
T  35693869 gcttaattacacttttgatccttgcattttgaccaatttacgaaaatgattctacctcttttaaatcgaataaaatcgtccataaactatatatattttt 35693968  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    | || |||||||| |||||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||| ||||    
T  35693969 ttcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctttgct 35694046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 155 - 328
Target Start/End: Original strand, 26252811 - 26252982
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||| || |  ||  ||||| || |||||||| ||||   |||| ||||||||||||||||||||||| ||||||||||||||| |    
T  26252811 ggcttaattacacttttgatctttgca--ttgactaattcacgaaattggtaacatctcttttaaatcgaacaaaatcgtccctaaactatatgttttgt 26252908  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctat 328  Q
    ||| |||||||| |||||||||||||||||||||| |||||| ||||||| |||  ||||||||||||||||||    
T  26252909 gcagttttagtcctatctccctatttccaactccagaaacgctcagaaatgacagatttagtccaaccacctat 26252982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 227 - 331
Target Start/End: Original strand, 35426885 - 35426989
Alignment:
Q  227 aaaatcgtccttaaactatatgttttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacct 326  Q
    ||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||| |    
T  35426885 aaaatggtccttaaactatatgttttttgcaattttactcctatctccctatttccaactccataaacgcacagaaatgacagttttagtctaaccacat 35426984  T
Q  327 atgct 331  Q
    |||||    
T  35426985 atgct 35426989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 155 - 328
Target Start/End: Complemental strand, 42036318 - 42036144
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-ttt 253  Q
    |||||||||| ||||||  || |  |||||||||||||| ||||||||| || || || ||||||||||||||||||||||| ||||||||||||| |||    
T  42036318 ggcttaattatacttttcatcttcgcattttgaccaacttacgaaaatgatcttacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 42036219  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctat 328  Q
    |||| |||||||| |||   | |||||||||||||| ||| ||||| |||| ||| |||||||||||||||||||    
T  42036218 tgcagttttagtcgtattctcatatttccaactccagaaatgcacaaaaatgacagttttagtccaaccacctat 42036144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 155 - 329
Target Start/End: Original strand, 7910616 - 7910791
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||| ||||||||||  |||||||| |||||||||||||||||  || || ||||||||||||||||||||||| |||| ||||||||||||    
T  7910616 ggcttaattacatttttggtcctcacattttgatcaactcacgaaaatggttatacctcttttaaatcgaacaaaatcgtccctaaattatatgtttttt 7910715  T
Q  255 gcaattttagtc--atatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatg 329  Q
    || | |||||||  |||||||  |||||| ||||| | ||| |||||||||| ||| |||||||| |||||| ||||    
T  7910716 gc-agtttagtcctatatctctttatttctaactcaagaaatgcacagaaatgacagttttagtcaaaccacatatg 7910791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 155 - 263
Target Start/End: Original strand, 18674148 - 18674256
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||| ||||||||  || ||||||||| |||||||| |||| ||  |  ||||||||||||||||||||||| |||||||||||||||||    
T  18674148 ggcttaattacactcttggtccttgcactttgaccaattcacgaaattggttcttccacttttaaatcgaacaaaatcgtccctaaactatatgtttttt 18674247  T
Q  255 gcaatttta 263  Q
    ||| |||||    
T  18674248 gcagtttta 18674256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 331
Target Start/End: Complemental strand, 28877432 - 28877260
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 256  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||  || || ||| |||| ||||||||| |||| | |||||| |||||||||||    
T  28877432 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttatacctctttcaaattgaacaaaattgtccct-aactatcatgttttttgc 28877334  T
Q  257 aattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
      |||||||| || ||  ||||||  ||||||| ||||| | | |||| |||||||||| || ||| ||||||||    
T  28877333 tgttttagtcctacct-tctatttttaactccagaaacgtatataaatgacaattttagacctacctcctatgct 28877260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 35426845 - 35426895
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcct 208  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35426845 ttaattacacttttagtcctaccattttgaccaactcacgaaaatggtcct 35426895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 315
Target Start/End: Original strand, 18805167 - 18805322
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 257  Q
    |||||||||||||||||||   ||||||||| | |||||||||||||| || ||| |||||||||||||||||  ||||   ||||||||||||||| |     
T  18805167 ttaattacacttttggtccctgcattttgacaagctcacgaaaatggttct-tctcttttaaatcgaacaaaactgtcccagaactatatgttttttcct 18805265  T
Q  258 attttagtcatatctccctatttccaactccataaacgcacagaaataacaattttag 315  Q
     |||||||| || || ||||| | |||||||| |||| || |||||| ||| ||||||    
T  18805266 gttttagtcctacct-cctatcttcaactccagaaacacagagaaatgacagttttag 18805322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 272 - 331
Target Start/End: Original strand, 35163815 - 35163874
Alignment:
Q  272 tccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||||||||||||||| | |||||||||||||| ||| ||||||||||||||||||||||    
T  35163815 tccctatttccaactcgagaaacgcacagaaatgacagttttagtccaaccacctatgct 35163874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 245
Target Start/End: Complemental strand, 9930202 - 9930112
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 245  Q
    |||||||||||||||||||||||   |||||| || |||||||||| |||||||  | |||| |||| ||||||||| |||||| ||||||    
T  9930202 ggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactat 9930112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 162 - 253
Target Start/End: Original strand, 28876910 - 28877002
Alignment:
Q  162 ttacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 253  Q
    ||||||||||||||||  |||||||| || |||||||||||  | ||  || ||| ||||||||||||||||||| |||||||| ||||||||    
T  28876910 ttacacttttggtcctcgcattttgatcagctcacgaaaataattctgcctctttcaaatcgaacaaaatcgtccctaaactatcatgttttt 28877002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 262
Target Start/End: Original strand, 2617748 - 2617853
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 256  Q
    ||||||||| |||| |||||  ||||||||||   |||||||| |  || | ||||||| |||| ||||||| | ||||||| ||||| |||||||||||    
T  2617748 ttaattacattttttgtccttgcattttgaccggttcacgaaattaatcatgtctttttcaaattgaacaaagtagtccttatactatcatgttttttgc 2617847  T
Q  257 aatttt 262  Q
    ||||||    
T  2617848 aatttt 2617853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 315
Target Start/End: Complemental strand, 11657002 - 11656841
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 253  Q
    |||||||||||||||||||||||    ||||| || |||||||||| ||||||   | |||| |||  ||||||||| |||||| || ||| || ||| |    
T  11657002 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcatttttgt 11656903  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttag 315  Q
    |||| |||| ||| || ||||   |||| ||||||| ||||||| ||||||| || ||||||    
T  11656902 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatagcagttttag 11656841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 253
Target Start/End: Complemental strand, 10047155 - 10047083
Alignment:
Q  182 ttttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 253  Q
    |||||| |||||||||||||| ||| | | | |||||||||||||||||| |||  |||||||| ||||||||    
T  10047155 ttttgatcaactcacgaaaatagtcttgtttcttttaaatcgaacaaaatggtctctaaactatcatgttttt 10047083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 139; Significance: 1e-72; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 154 - 331
Target Start/End: Complemental strand, 25472560 - 25472382
Alignment:
Q  154 tggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-tt 252  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||    
T  25472560 tggcttaattacacttttgatcctaccattttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 25472461  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||| |||||||| |||||||||||||||| ||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  25472460 ttgcagttttagtcctatctccctatttccagctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 25472382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 158 - 331
Target Start/End: Complemental strand, 24640728 - 24640555
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 257  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24640728 ttaattatacttttggtcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 24640629  T
Q  258 attttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
     |||||||| |||||||||||||||||||||  |||||||||||||| ||| || |||||||||||||||||||    
T  24640628 gttttagtcttatctccctatttccaactccgaaaacgcacagaaatgacagttctagtccaaccacctatgct 24640555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 5114468 - 5114644
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5114468 ggcttaattacatttttgatcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 5114567  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||| |||||||||||||||||||||| |||| ||||||||| ||| ||||||| ||||||||||||||    
T  5114568 gcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttagttcaaccacctatgct 5114644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 31574271 - 31574095
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| | ||| || || ||||||||||||||||||||||| |||||||||||||||||    
T  31574271 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 31574172  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||| |||||||||||||||||||||| |||||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  31574171 gcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacaattttagtccaaccacctatgct 31574095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 154 - 331
Target Start/End: Complemental strand, 31073689 - 31073512
Alignment:
Q  154 tggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 253  Q
    ||||||||||||||||||||||||  ||||||||||| ||||||||| ||||| || || |||||||||||||||||| |||| |||||||||||||||     
T  31073689 tggcttaattacacttttggtccttgcattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaattgtccctaaactatatgttttg 31073590  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||| |||||||| |||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  31073589 tgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 31073512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 31573720 - 31573901
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatctttttt-aaatcgaacaaaatcgtccttaaactatatgttttt 253  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||| ||||||||||||||||||    
T  31573720 ggcttaattatacttttggtcctaccattttgaccaactcacgaaaatagtcctatttttttttaaatcgaacaaaatcgttcttaaactatatgttttt 31573819  T
Q  254 t----gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |    ||| |||||||| |||||||||||||||||||||| ||||||| |||||| ||| ||||||||||||||||||||||    
T  31573820 tttttgcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagttttagtccaaccacctatgct 31573901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 155 - 322
Target Start/End: Complemental strand, 5121015 - 5120848
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| |  ||||| || ||||||||||||||||||||||| |||||||||||||||||    
T  5121015 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattattcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 5120916  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaacc 322  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||    
T  5120915 gcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttaatccaacc 5120848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 155 - 328
Target Start/End: Complemental strand, 30251238 - 30251064
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgt-tttt 253  Q
    |||||||||||||||||| |||||| |||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||| ||| ||||    
T  30251238 ggcttaattacacttttgatcctactattttgaccaactcacaaaaattgtcatatcttttttaaatcgaacaaaatcgtccttaaactatttgtatttt 30251139  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctat 328  Q
    || | |||||||| |||||||||||||||||||||| |||||||||||||| |||  ||||||||||||||||||    
T  30251138 tgtagttttagtcttatctccctatttccaactccagaaacgcacagaaatgacagatttagtccaaccacctat 30251064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 155 - 328
Target Start/End: Complemental strand, 29891630 - 29891453
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctat----cttttttaaatcgaacaaaatcgtccttaaactatatgtt 250  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||| |     || ||||||| ||||||||||||||||||||||||||||    
T  29891630 ggcttaattacacttttggtcctaccattttgaccaactcgtgaaaatggtccttttttatttatttaaattgaacaaaatcgtccttaaactatatgtt 29891531  T
Q  251 ttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctat 328  Q
    ||||||| |||||||| |||||||||||||||||||||| |||||||||||||| | | |||||||||||||||||||    
T  29891530 ttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgatagttttagtccaaccacctat 29891453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 158 - 331
Target Start/End: Original strand, 25468852 - 25469027
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt--ttg 255  Q
    ||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||  |||    
T  25468852 ttaattacacttttggtccttacattttgaccaactcacgaaattggtcatatctcttttaaatcgaacaaaatcgtccctaaactatatgtttttcttg 25468951  T
Q  256 caattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    || |||||||| |||||||||||||  || |||| |||||||||||||| ||| ||||| ||||||||||||||||    
T  25468952 cagttttagtcctatctccctattttaaattccagaaacgcacagaaatgacagttttattccaaccacctatgct 25469027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 29891080 - 29891256
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||| ||||  ||||||||| |||| |||||| || || || || ||||||| ||||||||| ||||| |||||||||||||||||    
T  29891080 ggcttaattacacttttgttccttacattttgactaacttacgaaattgatcatacctcttttaaaccgaacaaaagcgtccctaaactatatgtttttt 29891179  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
     |||||||| |  |||||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||||    
T  29891180 acaattttaattctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 29891256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 150 - 299
Target Start/End: Original strand, 28636287 - 28636435
Alignment:
Q  150 aaattggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgt 249  Q
    ||||||||||||||||| |||||||| |   |||||||||||||||||||| ||||| ||  | ||||||||||||||||||||| | |||||||||||     
T  28636287 aaattggcttaattacatttttggtcattgtattttgaccaactcacgaaattggtcttacttcttttaaatcgaacaaaatcgttcctaaactatatg- 28636385  T
Q  250 tttttgcaattttagtcatatctccctatttccaactccataaacgcaca 299  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  28636386 tttttgcagttttagtcatatctccctatttccaactccataaatgcaca 28636435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 228 - 331
Target Start/End: Complemental strand, 28636669 - 28636566
Alignment:
Q  228 aaatcgtccttaaactatatgttttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccaccta 327  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||    
T  28636669 aaatcgtccttaaactatatgttttttgcagttttagtcttatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccaccta 28636570  T
Q  328 tgct 331  Q
    ||||    
T  28636569 tgct 28636566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 149 - 295
Target Start/End: Original strand, 31073137 - 31073290
Alignment:
Q  149 aaaattggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatc------gtccttaaac 242  Q
    |||| ||||||||||||||||||||||||   |||||||||||| || ||||||||||||||||||||||||||||||||||||      ||||||||||    
T  31073137 aaaaatggcttaattacacttttggtcctttaattttgaccaacacatgaaaatggtcctatcttttttaaatcgaacaaaatcgtttaagtccttaaac 31073236  T
Q  243 tata-tgttttttgcaattttagtcatatctccctatttccaactccataaacg 295  Q
    |||| | ||||||||| |||||||||||||| |||||||||||||||| |||||    
T  31073237 tatattattttttgcagttttagtcatatcttcctatttccaactccagaaacg 31073290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 153 - 315
Target Start/End: Complemental strand, 32836544 - 32836383
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 252  Q
    ||||||||||||||||||| |||||  ||||||||||| ||||||||||||||| |  || ||| ||||||||||||| ||| |||||||| ||||||||    
T  32836544 ttggcttaattacacttttagtccttgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgttcttaaactgtatgtttt 32836445  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttag 315  Q
    ||||| |||||||| || ||  |||||| ||||| || ||||| | |||||||||| ||||||    
T  32836444 ttgcagttttagtcctacct-tctattttcaacttcagaaacgaagagaaataacagttttag 32836383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 155 - 330
Target Start/End: Complemental strand, 35163733 - 35163557
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt--tt 252  Q
    ||||||||||||||||||||||   ||||||||||| |||||||||||||| ||  || ||| ||||| ||||||||||||| |||||||||||||  ||    
T  35163733 ggcttaattacacttttggtccccgcattttgaccagctcacgaaaatggttctgcctctttcaaatcaaacaaaatcgtccctaaactatatgtttttt 35163634  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgc 330  Q
    ||||| |||||||| || || ||||||| |||||||| |||| || |||||| ||| |||||| || ||| |||||||    
T  35163633 ttgcagttttagtcctacct-cctattttcaactccaaaaacacagagaaatgacagttttaggcctaccccctatgc 35163557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 266
Target Start/End: Original strand, 35163187 - 35163295
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 256  Q
    |||||||||||||| |||||  ||||||||||| ||||| ||||||||| | ||| ||| ||||||||||||| ||||| |||||||| |||||||||||    
T  35163187 ttaattacacttttagtcctcgcattttgaccagctcacaaaaatggtcttgtctctttcaaatcgaacaaaaccgtcc-taaactatcatgttttttgc 35163285  T
Q  257 aattttagtc 266  Q
    | ||||||||    
T  35163286 agttttagtc 35163295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 300
Target Start/End: Original strand, 33095716 - 33095859
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttg 255  Q
    ||||||| |||||||||||||  |||||| | || ||| |||||||||||  | || ||| ||||||||||||| ||||| |||||||| ||||||||||    
T  33095716 cttaattgcacttttggtcctcgcatttttatcagctcgcgaaaatggtctcacctctttcaaatcgaacaaaaccgtccctaaactatcatgttttttg 33095815  T
Q  256 caattttagtcatatctccctatttccaactccataaacgcacag 300  Q
    || |||||||| || || ||||||| || ||||| ||||||||||    
T  33095816 cagttttagtcctacct-cctattttcacctccaaaaacgcacag 33095859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 153 - 301
Target Start/End: Complemental strand, 33096159 - 33096007
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatc----gtccttaaactat-at 247  Q
    ||||||||||| |||||||| || |  |||||| |||| |||| |||||||||| | ||| ||| ||||||||||||| |    ||||||||||||| ||    
T  33096159 ttggcttaattgcacttttgttcttcgcatttttaccagctcatgaaaatggtcatgtctctttcaaatcgaacaaaaccaactgtccttaaactatcat 33096060  T
Q  248 gttttttgcaattttagtcatatctccctatttccaactccataaacgcacaga 301  Q
    ||||||||||||||||||| || | |||||||| || ||||| |||||||||||    
T  33096059 gttttttgcaattttagtccta-ccccctattttcacctccaaaaacgcacaga 33096007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 331
Target Start/End: Original strand, 30250774 - 30250867
Alignment:
Q  238 taaactatatgttttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    ||||||||| ||||||||||  |||||||   ||||||||||||||||| || |||||||||||||| ||| ||||||||||| ||| ||||||    
T  30250774 taaactataagttttttgcagctttagtccattctccctatttccaactacagaaacgcacagaaatgacagttttagtccaatcacttatgct 30250867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 22534272 - 22534217
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcct 208  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  22534272 ttggcttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtcct 22534217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 31242809 - 31242878
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaaca 227  Q
    |||||||||||||||  |||  |||||||||||||||||||||||| ||||  |||||||||||||||||    
T  31242809 ttaattacacttttgaccctcgcattttgaccaactcacgaaaatgatcctgccttttttaaatcgaaca 31242878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 299
Target Start/End: Original strand, 835394 - 835537
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    ||||||||| |||||||||||||  |||||| | || ||||||||||||||| |  || ||| |||||||||||||  |||| ||||||||   ||||||    
T  835394 ggcttaattgcacttttggtcctcacatttttagcagctcacgaaaatggtcttgcctctttcaaatcgaacaaaactgtccctaaactatcattttttt 835493  T
Q  255 gcaattttagtcatatctccctatttccaactccataaacgcaca 299  Q
    |||  ||||||| || | |||||||| || ||||| |||||||||    
T  835494 gcagctttagtccta-ccccctattttcacctccaaaaacgcaca 835537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 30250722 - 30250775
Alignment:
Q  156 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtccta 209  Q
    ||||||||||| ||||||||||  ||||||||||||||||||||| ||||||||    
T  30250722 gcttaattacaattttggtccttgcattttgaccaactcacgaaattggtccta 30250775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 32836010 - 32836089
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcct 237  Q
    ||||||||||||||| ||||  ||||||||||| ||||| |||| ||||||  || ||| ||||||||||||| ||||||    
T  32836010 ttaattacacttttgatccttgcattttgaccagctcacaaaaacggtcctgcctctttcaaatcgaacaaaaccgtcct 32836089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 208
Target Start/End: Complemental strand, 18257691 - 18257629
Alignment:
Q  146 tataaaattggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcct 208  Q
    ||||||||||||||||||| ||||||||||||    |||||||| |||||||||| |||||||    
T  18257691 tataaaattggcttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcct 18257629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 315
Target Start/End: Original strand, 12935157 - 12935318
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 253  Q
    |||||||||||||||||||||||    ||||| || |||||||||| |||||||  | |||| |||  ||||||||  |||||| || ||| || ||| |    
T  12935157 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 12935256  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttag 315  Q
    |||| |||| ||| || ||||   |||| ||||||||||||||| |||||| ||| ||||||    
T  12935257 tgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 12935318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 835771 - 835695
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaat 231  Q
    ||||||||| |||||||||||||  |||||| | || || ||||||||||||||  || ||| ||||||||||||||    
T  835771 ggcttaattgcacttttggtcctcgcatttttagcagcttacgaaaatggtcctgcctctttcaaatcgaacaaaat 835695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 324
Target Start/End: Original strand, 11523747 - 11523854
Alignment:
Q  218 aaatcgaacaaaatcgtccttaaactat-atgtttttt-gcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttag 315  Q
    ||||| ||||||| ||||| |||||||| ||||||||| ||| |||||||| || |||  ||||| |||||||||||||||||| ||||  || || |||    
T  11523747 aaatcaaacaaaaccgtccctaaactatcatgtttttttgcagttttagtcctacctca-tattttcaactccataaacgcacaaaaattgcagttctag 11523845  T
Q  316 tccaaccac 324  Q
    |||||||||    
T  11523846 tccaaccac 11523854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 18297733 - 18297662
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaa 228  Q
    ||||||||||||||| ||| |   ||||| |||||||||||||| ||||| | |||||||||||| ||||||    
T  18297733 cttaattacacttttagtcttcgaattttaaccaactcacgaaattggtcatctcttttttaaattgaacaa 18297662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 4811365 - 4811423
Alignment:
Q  148 taaaattggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtc 206  Q
    ||||||||||||||||||||||||||||| |  ||||||  | |||||||||| |||||    
T  4811365 taaaattggcttaattacacttttggtcccagtattttggtctactcacgaaactggtc 4811423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 10900477 - 10900424
Alignment:
Q  153 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtc 206  Q
    |||||||||||||||||||||||||   |||||| || |||||||||| |||||    
T  10900477 ttggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtc 10900424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 315
Target Start/End: Complemental strand, 11445532 - 11445371
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 253  Q
    |||||||||||||||||||||||    ||||| || |||||||||| |||||||  |||||| |||  ||||||||  |||||| || ||| || ||| |    
T  11445532 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgt 11445433  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttag 315  Q
    |||| |||| ||| || ||||   |||| ||||| | ||||||| |||||| ||| ||||||    
T  11445432 tgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 11445371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 28472637 - 28472690
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcct 208  Q
    |||||||||||||||||||||||    ||||| ||||||||||||| |||||||    
T  28472637 ggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcct 28472690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 29859826 - 29859879
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcct 208  Q
    |||||||||||||||||||||||    ||||| ||||||||||||| |||||||    
T  29859826 ggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcct 29859879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 3835268 - 3835188
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctt 238  Q
    |||||||||||||||||||     |||||||| ||||||||||||||||||  || ||| |||  ||||||||| ||||||    
T  3835268 ttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctt 3835188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 154 - 331
Target Start/End: Original strand, 6391 - 6568
Alignment:
Q  154 tggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 253  Q
    |||||||||| ||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  6391 tggcttaattgcacttttggtcctaccattttgatcaactcatgaaaatggtactatcttttttaaatcgaacaaaatcgtccttaaattatatgttttt 6490  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||| |||||||| ||||| ||||||||||||| || |||||||||||||| ||| ||||| ||||||||| ||||||    
T  6491 tgcagttttagtcctatcttcctatttccaacttcagaaacgcacagaaatgacagttttattccaaccacatatgct 6568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 158 - 331
Target Start/End: Complemental strand, 6939 - 6761
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttttgc 256  Q
    |||||||| |||||||||||  |||||||||||| | |||||| ||||| ||  | ||||||||||||||||||||| | ||||||| ||| ||||||||    
T  6939 ttaattactcttttggtccttgcattttgaccaatttacgaaattggtcttacatcttttaaatcgaacaaaatcgtacctaaactacatgtttttttgc 6840  T
Q  257 aattttagt----catatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    | |||||||    | ||||||||||||| |||||||| |||||||||||||| ||| ||||||||||||||| ||||||    
T  6839 agttttagtcctacctatctccctattttcaactccagaaacgcacagaaatgacagttttagtccaaccacatatgct 6761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 154 - 331
Target Start/End: Original strand, 6409 - 6586
Alignment:
Q  154 tggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 253  Q
    |||||||||| ||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  6409 tggcttaattgcacttttggtcctaccattttgatcaactcatgaaaatggtactatcttttttaaatcgaacaaaatcgtccttaaattatatgttttt 6508  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||| |||||||| ||||| ||||||||||||| || |||||||||||||| ||| ||||| ||||||||| ||||||    
T  6509 tgcagttttagtcctatcttcctatttccaacttcagaaacgcacagaaatgacagttttattccaaccacatatgct 6586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 158 - 331
Target Start/End: Complemental strand, 6957 - 6779
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttttgc 256  Q
    |||||||| |||||||||||  |||||||||||| | |||||| ||||| ||  | ||||||||||||||||||||| | ||||||| ||| ||||||||    
T  6957 ttaattactcttttggtccttgcattttgaccaatttacgaaattggtcttacatcttttaaatcgaacaaaatcgtacctaaactacatgtttttttgc 6858  T
Q  257 aattttagt----catatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    | |||||||    | ||||||||||||| |||||||| |||||||||||||| ||| ||||||||||||||| ||||||    
T  6857 agttttagtcctacctatctccctattttcaactccagaaacgcacagaaatgacagttttagtccaaccacatatgct 6779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 46814 - 46637
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt-ttt 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||| |||    
T  46814 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatatattttaaatcgaacaaaatcgtctttaaactatatgtttttt 46715  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    || | |||||||  |||| ||||||||||||||||| ||||||||| |||| |||||||| |||||||||||||||||    
T  46714 tgtagttttagttctatcaccctatttccaactccaaaaacgcacataaatgacaattttggtccaaccacctatgct 46637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 155 - 331
Target Start/End: Original strand, 46266 - 46443
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 253  Q
    ||||||||| |||||||||||||  |||||||||||||| ||||||||||| ||| || ||||||||||||||||||| ||| ||||||||||| |||||    
T  46266 ggcttaattgcacttttggtcctcgcattttgaccaacttacgaaaatggttctacctcttttaaatcgaacaaaatcatccctaaactatatgtttttt 46365  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||| |||||||||||||||||||||||||| |||||||| ||||| |||| ||| ||||||||||||||||||||||    
T  46366 tgcagttttagtcatatctccctatttccaattccataaatgcacaaaaatgacagttttagtccaaccacctatgct 46443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 233 - 331
Target Start/End: Original strand, 78395 - 78493
Alignment:
Q  233 gtccttaaactatatgttttttgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    |||| |||||||||||||||||||| |||||||| |||||| ||||||||||||||| ||| ||| |||||| ||||||||||||||||||||||||||    
T  78395 gtccctaaactatatgttttttgcagttttagtcctatctctctatttccaactccagaaatgcatagaaatgacaattttagtccaaccacctatgct 78493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 64; Significance: 6e-28; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 157 - 331
Target Start/End: Complemental strand, 205911 - 205738
Alignment:
Q  157 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttg 255  Q
    ||||||||||||||| |||||  |||||||||||||||||||||||||||||  || ||| ||||||||||||| ||||| |||||||| ||| ||||||    
T  205911 cttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatg-tttttg 205813  T
Q  256 caattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttagtccaaccacctatgct 331  Q
    || |||||||| || |  ||||||| |||||||| ||||||| ||||||  || |||||| || ||| ||||||||    
T  205812 cagttttagtccta-cgtcctattttcaactccaaaaacgcagagaaatggcagttttagacctaccccctatgct 205738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 245
Target Start/End: Complemental strand, 210883 - 210793
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 245  Q
    |||||||||||||||||||||||  |||||||||||||||| ||||||||||||  || ||| ||||||||||||| ||||| ||||||||    
T  210883 ggcttaattacacttttggtcctcacattttgaccaactcatgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactat 210793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 253
Target Start/End: Original strand, 204931 - 205027
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 253  Q
    ||||||||||||||||||||   |||||||||| |||||||  ||||||||  || ||| ||||| |||||||| |||| |||||||| ||||||||    
T  204931 ttaattacacttttggtccttgtattttgaccagctcacgactatggtccttcctctttcaaatcaaacaaaattgtccctaaactatcatgttttt 205027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 253
Target Start/End: Original strand, 205361 - 205457
Alignment:
Q  158 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 253  Q
    ||||||||||||||| ||||   |||||||||| |||||||  ||||||||  || ||| |||||||||||| | |||| |||||||| ||||||||    
T  205361 ttaattacacttttgatccttgtattttgaccagctcacgactatggtccttcctctttcaaatcgaacaaatttgtccctaaactatcatgttttt 205457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 300
Target Start/End: Complemental strand, 159427 - 159282
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 253  Q
    ||||||||| ||| |||  |||| ||||||| |||  ||||||||||||||| | ||| ||| ||||||||||||||||| | |||||||| || |||||    
T  159427 ggcttaattgcacatttaatccttccatttttaccggctcacgaaaatggtcatgtctctttcaaatcgaacaaaatcgttcataaactatcatattttt 159328  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacag 300  Q
    |||| ||||||||||| | |||||||| || ||||| ||||||||||    
T  159327 tgcagttttagtcata-ccccctattttcacctccaaaaacgcacag 159282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 315
Target Start/End: Original strand, 15113 - 15272
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 253  Q
    |||||||||| |||||||||| |  ||||||||||| ||| |||||||| | ||  || ||| ||||||||||||| |  || |||||||| ||||||||    
T  15113 ggcttaattatacttttggtcatcgcattttgaccagctcgcgaaaatgattctgcctctttcaaatcgaacaaaaacaaccctaaactatcatgttttt 15212  T
Q  254 tgcaattttagtcatatctccctatttccaactccataaacgcacagaaataacaattttag 315  Q
     ||| |||| ||| || |||| ||||| ||||| ||||||||||||||||||||||||||||    
T  15213 -gcagtttttgtcttacctcc-tattttcaacttcataaacgcacagaaataacaattttag 15272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 297
Target Start/End: Complemental strand, 15645 - 15503
Alignment:
Q  154 tggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttt 252  Q
    ||||||||||| | ||||||| ||  |||||||| || |||||||||||||||||  || ||| |||||||||||||  |||| |||||||| ||| |||    
T  15645 tggcttaattagatttttggttctcgcattttgatcagctcacgaaaatggtcctgactctttcaaatcgaacaaaactgtccctaaactatcatg-ttt 15547  T
Q  253 ttgcaattttagtcatatctccctatttccaactccataaacgca 297  Q
    ||| | ||||||||||| || ||||||| |||||||| |||||||    
T  15546 ttgtagttttagtcatacct-cctattttcaactccagaaacgca 15503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1432 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1432
Description:

Target: scaffold1432; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 262
Target Start/End: Complemental strand, 611 - 504
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 254  Q
    |||||||||||||||||| ||||  ||||||||| | ||||||||||||||| |  || ||| |||||||||||||  |||  |||||||||||||||||    
T  611 ggcttaattacacttttgatcctcgcattttgacgagctcacgaaaatggtcttgcctctttcaaatcgaacaaaacagtctctaaactatatgtttttt 512  T
Q  255 gcaatttt 262  Q
    ||| ||||    
T  511 gcagtttt 504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 1667 - 1720
Alignment:
Q  155 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcct 208  Q
    ||||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  1667 ggcttaattacacttttggtcctcctgttttggcctactcacgaaactggtcct 1720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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