View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11854_high_64 (Length: 288)
Name: NF11854_high_64
Description: NF11854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11854_high_64 |
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Alignment Details
Target: chr6 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 7 - 283
Target Start/End: Original strand, 25946477 - 25946754
Alignment:
| Q |
7 |
agtgggtctcatcttccatacgtgcgtaaatgctttgataaaa-tgttctaaaaaactctcttaatggcattagctacgtgccgttttccaaggaaacaa |
105 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |
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| T |
25946477 |
agtgggtcacatcttccatacgtgcgtaaatgctttgataaaaatgttctaaaaaaatctcttaatggcattagctaagtgccgttttccaaggaaacaa |
25946576 |
T |
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| Q |
106 |
cggttaaaagactccttttaaagaaacttccatatgtttagagaaattgctttgtagttagtttcccgttataagttcttgagtcctatcttccaaaacg |
205 |
Q |
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||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25946577 |
cggttaaaaaactccttttaaagaaacttccctatgtttagagaaactgctttgtagttagtttcccgttataagttcttgagtcctatcttccaaaacg |
25946676 |
T |
|
| Q |
206 |
ttcctctcttagtgtatcgtgagatattatctcgctcattccttaaacatggaaatgcttccgaccgatctccctatg |
283 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
25946677 |
ttcctctcttagtgtatcatgagatattatctcgctcattccttaaacatggaaatgcttccgaccgatctccttatg |
25946754 |
T |
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