View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11854_high_83 (Length: 253)
Name: NF11854_high_83
Description: NF11854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11854_high_83 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 19 - 253
Target Start/End: Original strand, 426263 - 426499
Alignment:
| Q |
19 |
atactttgatacaattttcatacaaaatcttaaagcattaaatttatacaagcccgatcaaatggacataactagtagtgaaattatgaagagataaaac |
118 |
Q |
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| T |
426263 |
atactttgatacaattttcatacaaaatcttaaagcattaaatttatacaagcccgatcaaatggacataactagtagtgaaattatgaagagataaaac |
426362 |
T |
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| Q |
119 |
aaggtaaattaacttctgaaaatgccttaattatttacac--atgcataagataagtttggataaactcatactctaattttggttagtcaagttatttt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
426363 |
aaggtaaattaacttctgaaaatgccttaattatttacacatatgcataagataagtttggataaactcatactctaattttggttagtcaagttatttt |
426462 |
T |
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| Q |
217 |
tgagtcaatcaaatcctatgaagcacggacactcctc |
253 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
426463 |
tgagtcaatcaaatcctatgaagcacggacactcctc |
426499 |
T |
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