View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11854_high_93 (Length: 241)
Name: NF11854_high_93
Description: NF11854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11854_high_93 |
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Alignment Details
Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 27774942 - 27774719
Alignment:
| Q |
1 |
ttaaaggaaaggaaataaaacaagacaagttcacattattttgtagttactacaagatggctagacccacagttcatttaactgaaatatgtagccatgt |
100 |
Q |
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| T |
27774942 |
ttaaaggaaaggaaataaaacaagacaagttcacattattttgtagttactacaagatggctagacccacagttcatttaactgaaatatgtagccatgt |
27774843 |
T |
|
| Q |
101 |
tccttgctacaaggaccatataggacatggaattgcctagacccactaacaatgccaagtggagtcttaaatatcatacctaactatatggtaatggcgt |
200 |
Q |
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||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27774842 |
cccttgttacaaggaccatataggacatggaattgcctagacccactaacaatgccaagtggagtcttaaatatcatacctaactatatggtaatggcgt |
27774743 |
T |
|
| Q |
201 |
ggcttctgggattaaagacacatc |
224 |
Q |
| |
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||||||| |||||||||||||||| |
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| T |
27774742 |
ggcttcttggattaaagacacatc |
27774719 |
T |
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