View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11854_low_46 (Length: 341)

Name: NF11854_low_46
Description: NF11854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11854_low_46
NF11854_low_46
[»] chr5 (38 HSPs)
chr5 (1-323)||(41875637-41875959)
chr5 (4-323)||(9776794-9777113)
chr5 (4-323)||(37804117-37804436)
chr5 (1-257)||(33472674-33472930)
chr5 (4-257)||(27868685-27868938)
chr5 (1-215)||(29448524-29448738)
chr5 (1-215)||(17011412-17011626)
chr5 (141-257)||(18419277-18419393)
chr5 (8-90)||(263551-263633)
chr5 (159-244)||(22412930-22413015)
chr5 (232-323)||(7786099-7786188)
chr5 (141-213)||(24594218-24594290)
chr5 (143-213)||(24668312-24668382)
chr5 (143-213)||(24738081-24738151)
chr5 (143-213)||(24750850-24750920)
chr5 (235-320)||(26707296-26707379)
chr5 (235-320)||(26977030-26977113)
chr5 (124-207)||(21503947-21504029)
chr5 (5-41)||(17909157-17909193)
chr5 (152-215)||(265873-265936)
chr5 (157-196)||(36508916-36508955)
chr5 (1-55)||(8833519-8833573)
chr5 (1-55)||(26749717-26749771)
chr5 (5-57)||(7425001-7425053)
chr5 (5-41)||(21933192-21933228)
chr5 (5-41)||(21939362-21939398)
chr5 (5-41)||(22883850-22883886)
chr5 (5-41)||(36990588-36990624)
chr5 (3-34)||(1627714-1627745)
chr5 (92-194)||(20313050-20313152)
chr5 (1-55)||(26762087-26762141)
chr5 (157-207)||(30138245-30138295)
chr5 (1-46)||(22337006-22337051)
chr5 (1-46)||(22750627-22750672)
chr5 (1-34)||(24276939-24276972)
chr5 (1-34)||(24385241-24385274)
chr5 (1-41)||(16604930-16604970)
chr5 (5-41)||(35581464-35581500)
[»] chr2 (29 HSPs)
chr2 (40-323)||(13100779-13101062)
chr2 (4-323)||(10683977-10684296)
chr2 (4-323)||(20261848-20262167)
chr2 (1-289)||(23338478-23338766)
chr2 (1-215)||(25183873-25184087)
chr2 (1-257)||(31345805-31346061)
chr2 (1-215)||(18358121-18358335)
chr2 (141-285)||(20590365-20590509)
chr2 (1-215)||(21081123-21081337)
chr2 (4-215)||(21915311-21915522)
chr2 (130-257)||(21072799-21072926)
chr2 (141-257)||(41301040-41301156)
chr2 (157-244)||(43707171-43707258)
chr2 (157-244)||(22173101-22173188)
chr2 (157-244)||(7187267-7187354)
chr2 (265-323)||(25652174-25652232)
chr2 (3-57)||(29113999-29114053)
chr2 (141-205)||(149670-149734)
chr2 (127-196)||(28345209-28345277)
chr2 (5-41)||(23778621-23778657)
chr2 (5-41)||(24686547-24686583)
chr2 (157-196)||(1383825-1383864)
chr2 (5-41)||(11232162-11232198)
chr2 (4-56)||(21315973-21316025)
chr2 (5-41)||(22514009-22514045)
chr2 (5-41)||(28776611-28776647)
chr2 (157-205)||(36734616-36734664)
chr2 (214-299)||(24161179-24161262)
chr2 (5-41)||(22255902-22255938)
[»] chr3 (57 HSPs)
chr3 (1-323)||(54521448-54521770)
chr3 (4-323)||(12305751-12306070)
chr3 (82-323)||(3803580-3803821)
chr3 (1-257)||(42213-42469)
chr3 (1-257)||(16324651-16324907)
chr3 (82-323)||(29544078-29544319)
chr3 (4-257)||(13436927-13437180)
chr3 (141-323)||(55291646-55291828)
chr3 (153-323)||(46722631-46722801)
chr3 (4-257)||(5224012-5224264)
chr3 (1-257)||(26054545-26054801)
chr3 (1-215)||(16979596-16979810)
chr3 (4-189)||(14641729-14641913)
chr3 (1-257)||(15465780-15466036)
chr3 (153-289)||(10555144-10555280)
chr3 (1-215)||(22652458-22652671)
chr3 (141-247)||(43549776-43549882)
chr3 (130-223)||(18890238-18890331)
chr3 (157-257)||(10833416-10833516)
chr3 (130-257)||(18893497-18893623)
chr3 (157-244)||(6820011-6820098)
chr3 (159-244)||(50243656-50243741)
chr3 (171-243)||(24152509-24152581)
chr3 (223-323)||(15238969-15239067)
chr3 (159-244)||(16643926-16644011)
chr3 (152-244)||(43929227-43929319)
chr3 (4-66)||(3803524-3803586)
chr3 (92-196)||(48043651-48043754)
chr3 (5-68)||(18739585-18739648)
chr3 (1-44)||(10833662-10833705)
chr3 (99-193)||(29907418-29907512)
chr3 (99-193)||(29948584-29948678)
chr3 (99-193)||(29997738-29997832)
chr3 (6-41)||(25058423-25058458)
chr3 (7-57)||(17938218-17938268)
chr3 (4-66)||(29544313-29544375)
chr3 (94-215)||(45803491-45803611)
chr3 (5-41)||(1468563-1468599)
chr3 (124-196)||(3527329-3527400)
chr3 (5-41)||(12808629-12808665)
chr3 (223-290)||(15233101-15233166)
chr3 (214-299)||(11325115-11325199)
chr3 (1-44)||(17670032-17670075)
chr3 (1-55)||(15978158-15978212)
chr3 (1-55)||(33564815-33564869)
chr3 (1-55)||(35961199-35961253)
chr3 (1-55)||(53646372-53646426)
chr3 (1-34)||(3161254-3161287)
chr3 (1-46)||(20248305-20248350)
chr3 (117-194)||(25201936-25202013)
chr3 (1-34)||(48044080-48044113)
chr3 (157-205)||(6805091-6805139)
chr3 (5-41)||(8269312-8269348)
chr3 (5-41)||(8276423-8276459)
chr3 (1-57)||(24546526-24546582)
chr3 (9-57)||(25104514-25104562)
chr3 (1-65)||(45803950-45804014)
[»] chr4 (46 HSPs)
chr4 (1-323)||(49546989-49547310)
chr4 (4-323)||(36038499-36038818)
chr4 (4-323)||(15534810-15535129)
chr4 (1-289)||(33849428-33849716)
chr4 (1-257)||(28385929-28386185)
chr4 (1-189)||(9638693-9638881)
chr4 (140-289)||(16277366-16277515)
chr4 (140-289)||(53386976-53387125)
chr4 (1-204)||(15008652-15008855)
chr4 (1-215)||(40620216-40620430)
chr4 (3-215)||(10694399-10694611)
chr4 (3-215)||(10908165-10908377)
chr4 (140-257)||(18230565-18230682)
chr4 (159-244)||(23802528-23802613)
chr4 (157-244)||(15344776-15344863)
chr4 (157-244)||(12611752-12611839)
chr4 (159-244)||(15447501-15447586)
chr4 (223-323)||(32490653-32490751)
chr4 (157-244)||(51463152-51463239)
chr4 (214-299)||(15415948-15416031)
chr4 (214-299)||(16370789-16370872)
chr4 (141-205)||(14549474-14549538)
chr4 (5-41)||(14995768-14995804)
chr4 (157-205)||(19434823-19434871)
chr4 (141-205)||(35660712-35660776)
chr4 (157-244)||(13043893-13043980)
chr4 (127-205)||(16296681-16296759)
chr4 (1-55)||(44023916-44023970)
chr4 (199-257)||(45005828-45005886)
chr4 (1-34)||(30147541-30147574)
chr4 (5-57)||(15287792-15287844)
chr4 (5-41)||(19697922-19697958)
chr4 (5-41)||(19708507-19708543)
chr4 (1-56)||(7640668-7640723)
chr4 (5-40)||(10643870-10643905)
chr4 (5-44)||(18247863-18247902)
chr4 (1-55)||(9923882-9923936)
chr4 (1-55)||(46740884-46740938)
chr4 (1-55)||(50221822-50221876)
chr4 (4-57)||(10237808-10237861)
chr4 (3-36)||(13164781-13164814)
chr4 (1-34)||(14477025-14477058)
chr4 (267-323)||(15318871-15318928)
chr4 (3-55)||(12623000-12623052)
chr4 (5-57)||(15294902-15294954)
chr4 (5-57)||(19020133-19020185)
[»] chr7 (62 HSPs)
chr7 (4-323)||(11303876-11304195)
chr7 (4-323)||(23664167-23664486)
chr7 (4-323)||(29797239-29797559)
chr7 (4-323)||(29801058-29801378)
chr7 (4-257)||(16107969-16108222)
chr7 (1-257)||(11661791-11662047)
chr7 (1-257)||(14188404-14188660)
chr7 (141-323)||(14105472-14105654)
chr7 (141-323)||(14415489-14415671)
chr7 (1-257)||(1856511-1856766)
chr7 (8-189)||(17070470-17070651)
chr7 (1-257)||(25926410-25926666)
chr7 (1-257)||(13917683-13917939)
chr7 (140-289)||(17505043-17505192)
chr7 (140-289)||(17548022-17548171)
chr7 (1-215)||(16550156-16550370)
chr7 (1-215)||(16615292-16615506)
chr7 (4-215)||(32160354-32160565)
chr7 (141-240)||(4325921-4326020)
chr7 (157-244)||(13864486-13864573)
chr7 (157-244)||(16462910-16462997)
chr7 (157-257)||(13648123-13648223)
chr7 (152-244)||(39431311-39431403)
chr7 (140-247)||(13256517-13256624)
chr7 (141-244)||(44190340-44190443)
chr7 (223-323)||(12201129-12201227)
chr7 (223-323)||(12207734-12207832)
chr7 (159-244)||(18455712-18455797)
chr7 (1-66)||(29052456-29052521)
chr7 (141-203)||(19195016-19195078)
chr7 (141-205)||(12754829-12754893)
chr7 (92-196)||(18570421-18570524)
chr7 (157-196)||(708694-708733)
chr7 (157-212)||(14274063-14274118)
chr7 (53-203)||(8930933-8931083)
chr7 (157-207)||(25942312-25942362)
chr7 (157-215)||(29052336-29052394)
chr7 (119-205)||(38295405-38295490)
chr7 (3-44)||(3192617-3192658)
chr7 (187-244)||(23557404-23557461)
chr7 (5-41)||(7822137-7822173)
chr7 (5-41)||(7829448-7829484)
chr7 (5-41)||(27102461-27102497)
chr7 (5-41)||(27109809-27109845)
chr7 (5-41)||(27175829-27175865)
chr7 (5-41)||(38784553-38784589)
chr7 (1-44)||(15720435-15720478)
chr7 (141-196)||(37539272-37539327)
chr7 (1-47)||(8563911-8563957)
chr7 (80-205)||(13315245-13315370)
chr7 (1-55)||(14317757-14317811)
chr7 (1-55)||(41523543-41523597)
chr7 (1-55)||(41526005-41526059)
chr7 (270-323)||(14249711-14249764)
chr7 (1-46)||(15167661-15167706)
chr7 (3-44)||(18985055-18985096)
chr7 (3-44)||(18999683-18999724)
chr7 (1-34)||(33556702-33556735)
chr7 (204-257)||(42374415-42374468)
chr7 (3-55)||(26355464-26355516)
chr7 (3-55)||(26357916-26357968)
chr7 (141-205)||(47975055-47975119)
[»] chr6 (38 HSPs)
chr6 (4-323)||(12942818-12943137)
chr6 (4-323)||(28288552-28288870)
chr6 (1-257)||(23956548-23956804)
chr6 (4-257)||(13765035-13765288)
chr6 (1-189)||(19825667-19825855)
chr6 (1-162)||(25807818-25807979)
chr6 (1-257)||(23415590-23415846)
chr6 (1-257)||(27557348-27557604)
chr6 (1-215)||(15173607-15173821)
chr6 (1-247)||(31021842-31022063)
chr6 (159-257)||(23225968-23226066)
chr6 (53-215)||(15891723-15891885)
chr6 (157-244)||(20556156-20556243)
chr6 (159-242)||(25619023-25619106)
chr6 (170-244)||(14978665-14978739)
chr6 (56-215)||(15900808-15900967)
chr6 (157-244)||(611641-611728)
chr6 (232-321)||(9185043-9185132)
chr6 (3-57)||(17857002-17857056)
chr6 (141-207)||(29045088-29045154)
chr6 (119-204)||(10446015-10446099)
chr6 (5-41)||(10488095-10488131)
chr6 (5-41)||(16377197-16377233)
chr6 (5-41)||(16384521-16384557)
chr6 (5-41)||(16556894-16556930)
chr6 (5-41)||(16633450-16633486)
chr6 (265-323)||(18138497-18138555)
chr6 (1-44)||(35057190-35057233)
chr6 (7-57)||(19609706-19609756)
chr6 (1-55)||(23656025-23656079)
chr6 (1-55)||(33862419-33862473)
chr6 (127-204)||(1818763-1818839)
chr6 (3-36)||(18452341-18452374)
chr6 (8-57)||(25921424-25921473)
chr6 (16-65)||(30673997-30674046)
chr6 (5-41)||(16650124-16650160)
chr6 (1-41)||(18928409-18928449)
chr6 (5-41)||(25904599-25904635)
[»] chr1 (34 HSPs)
chr1 (1-289)||(297041-297329)
chr1 (1-257)||(28313034-28313290)
chr1 (1-189)||(8276170-8276358)
chr1 (1-215)||(50001160-50001374)
chr1 (1-215)||(29763786-29764000)
chr1 (87-189)||(38056853-38056954)
chr1 (141-257)||(22130136-22130252)
chr1 (157-257)||(45574130-45574230)
chr1 (159-244)||(13880660-13880745)
chr1 (1-63)||(38056955-38057017)
chr1 (4-66)||(46198026-46198088)
chr1 (141-213)||(23194667-23194739)
chr1 (127-205)||(8306414-8306492)
chr1 (82-215)||(46197899-46198032)
chr1 (214-321)||(21526827-21526933)
chr1 (8-57)||(9784653-9784702)
chr1 (152-205)||(24723624-24723677)
chr1 (1-55)||(38887399-38887453)
chr1 (1-55)||(41225767-41225821)
chr1 (1-55)||(41227020-41227074)
chr1 (5-38)||(18060527-18060560)
chr1 (1-34)||(29535677-29535710)
chr1 (141-205)||(7052177-7052241)
chr1 (5-41)||(17004033-17004069)
chr1 (92-196)||(34392541-34392644)
chr1 (5-41)||(38055901-38055937)
chr1 (1-44)||(6833900-6833943)
chr1 (1-56)||(21046360-21046415)
chr1 (265-323)||(24476279-24476338)
chr1 (1-55)||(21841392-21841446)
chr1 (1-55)||(21922774-21922828)
chr1 (266-323)||(5381568-5381625)
chr1 (141-205)||(17901966-17902030)
chr1 (279-323)||(21986080-21986124)
[»] chr8 (42 HSPs)
chr8 (1-257)||(8413859-8414115)
chr8 (1-257)||(11775408-11775655)
chr8 (1-162)||(17795918-17796079)
chr8 (8-247)||(14397031-14397269)
chr8 (76-257)||(19882708-19882889)
chr8 (3-215)||(16198522-16198734)
chr8 (1-215)||(23478766-23478980)
chr8 (4-215)||(25657668-25657879)
chr8 (1-215)||(19880514-19880721)
chr8 (1-113)||(26454397-26454509)
chr8 (157-257)||(25483552-25483652)
chr8 (159-244)||(23661140-23661225)
chr8 (160-244)||(20455831-20455915)
chr8 (169-244)||(20463048-20463123)
chr8 (170-244)||(17460331-17460405)
chr8 (160-239)||(20460809-20460888)
chr8 (160-239)||(20455095-20455174)
chr8 (3-57)||(24907462-24907516)
chr8 (221-321)||(22617542-22617641)
chr8 (5-41)||(15319938-15319974)
chr8 (5-41)||(15500307-15500343)
chr8 (5-41)||(22147101-22147137)
chr8 (92-204)||(22610431-22610542)
chr8 (152-204)||(36732649-36732701)
chr8 (1-55)||(36405372-36405426)
chr8 (5-41)||(643700-643736)
chr8 (5-41)||(18612076-18612112)
chr8 (5-41)||(22089322-22089358)
chr8 (4-55)||(17978729-17978780)
chr8 (1-44)||(19882654-19882697)
chr8 (1-44)||(21399396-21399439)
chr8 (1-44)||(21793889-21793932)
chr8 (4-55)||(22474440-22474491)
chr8 (157-204)||(26454546-26454593)
chr8 (1-44)||(29763192-29763235)
chr8 (5-39)||(272115-272149)
chr8 (5-39)||(829506-829540)
chr8 (1-55)||(18677547-18677601)
chr8 (157-215)||(20879313-20879371)
chr8 (1-55)||(22207953-22208007)
chr8 (5-41)||(18618953-18618989)
chr8 (124-204)||(23883977-23884056)
[»] scaffold0001 (2 HSPs)
scaffold0001 (1-257)||(169125-169381)
scaffold0001 (1-257)||(176478-176734)
[»] scaffold0422 (1 HSPs)
scaffold0422 (1-257)||(3649-3905)
[»] scaffold0453 (1 HSPs)
scaffold0453 (48-257)||(7121-7330)
[»] scaffold0200 (1 HSPs)
scaffold0200 (1-257)||(18279-18535)
[»] scaffold0328 (1 HSPs)
scaffold0328 (1-187)||(18824-19010)
[»] scaffold0436 (1 HSPs)
scaffold0436 (1-215)||(8644-8858)
[»] scaffold0083 (2 HSPs)
scaffold0083 (1-215)||(1621-1835)
scaffold0083 (172-244)||(42153-42225)
[»] scaffold0051 (1 HSPs)
scaffold0051 (1-257)||(31829-32084)
[»] scaffold0220 (2 HSPs)
scaffold0220 (1-189)||(13632-13820)
scaffold0220 (79-143)||(8887-8951)
[»] scaffold0061 (2 HSPs)
scaffold0061 (4-215)||(14740-14949)
scaffold0061 (4-215)||(23798-24007)
[»] scaffold0058 (2 HSPs)
scaffold0058 (1-108)||(6144-6251)
scaffold0058 (141-257)||(39923-40039)
[»] scaffold0046 (2 HSPs)
scaffold0046 (4-215)||(21931-22132)
scaffold0046 (279-323)||(71510-71554)
[»] scaffold0462 (1 HSPs)
scaffold0462 (1-215)||(10907-11121)
[»] scaffold0138 (2 HSPs)
scaffold0138 (1-215)||(33797-34010)
scaffold0138 (141-215)||(20921-20995)
[»] scaffold0515 (1 HSPs)
scaffold0515 (1-194)||(4720-4913)
[»] scaffold0306 (1 HSPs)
scaffold0306 (1-194)||(4720-4913)
[»] scaffold0004 (2 HSPs)
scaffold0004 (239-323)||(385083-385167)
scaffold0004 (141-205)||(66243-66306)
[»] scaffold0070 (1 HSPs)
scaffold0070 (157-244)||(8932-9019)
[»] scaffold0151 (1 HSPs)
scaffold0151 (141-246)||(9920-10025)
[»] scaffold0364 (1 HSPs)
scaffold0364 (157-244)||(8005-8092)
[»] scaffold0956 (1 HSPs)
scaffold0956 (158-244)||(2219-2305)
[»] scaffold1276 (1 HSPs)
scaffold1276 (152-257)||(976-1081)
[»] scaffold0117 (2 HSPs)
scaffold0117 (1-66)||(42379-42444)
scaffold0117 (158-257)||(42514-42613)
[»] scaffold0293 (2 HSPs)
scaffold0293 (141-257)||(19410-19526)
scaffold0293 (5-55)||(19571-19621)
[»] scaffold0106 (1 HSPs)
scaffold0106 (152-243)||(21820-21911)
[»] scaffold0016 (2 HSPs)
scaffold0016 (141-244)||(174232-174335)
scaffold0016 (221-321)||(182092-182192)
[»] scaffold0877 (1 HSPs)
scaffold0877 (159-244)||(2151-2236)
[»] scaffold0334 (1 HSPs)
scaffold0334 (152-257)||(1961-2066)
[»] scaffold0290 (1 HSPs)
scaffold0290 (159-244)||(916-1001)
[»] scaffold0125 (1 HSPs)
scaffold0125 (159-244)||(1174-1259)
[»] scaffold0394 (2 HSPs)
scaffold0394 (157-244)||(12891-12978)
scaffold0394 (3-44)||(7875-7916)
[»] scaffold0057 (2 HSPs)
scaffold0057 (157-244)||(72278-72365)
scaffold0057 (141-215)||(70007-70081)
[»] scaffold0034 (2 HSPs)
scaffold0034 (1-57)||(29507-29563)
scaffold0034 (76-215)||(29370-29509)
[»] scaffold1439 (1 HSPs)
scaffold1439 (157-244)||(917-1004)
[»] scaffold0112 (1 HSPs)
scaffold0112 (169-244)||(23247-23322)
[»] scaffold0100 (2 HSPs)
scaffold0100 (9-65)||(9777-9833)
scaffold0100 (3-65)||(27217-27279)
[»] scaffold0026 (2 HSPs)
scaffold0026 (141-215)||(21946-22020)
scaffold0026 (266-323)||(36502-36559)
[»] scaffold0676 (1 HSPs)
scaffold0676 (141-205)||(2638-2702)
[»] scaffold0148 (1 HSPs)
scaffold0148 (97-189)||(8621-8713)
[»] scaffold0090 (1 HSPs)
scaffold0090 (232-321)||(31492-31580)
[»] scaffold0023 (1 HSPs)
scaffold0023 (157-244)||(163175-163262)
[»] scaffold0037 (1 HSPs)
scaffold0037 (157-238)||(82839-82920)
[»] scaffold0107 (1 HSPs)
scaffold0107 (5-41)||(30594-30630)
[»] scaffold0730 (1 HSPs)
scaffold0730 (117-196)||(6677-6756)
[»] scaffold0205 (1 HSPs)
scaffold0205 (96-207)||(5778-5888)
[»] scaffold0439 (1 HSPs)
scaffold0439 (157-215)||(12081-12139)
[»] scaffold0278 (1 HSPs)
scaffold0278 (199-257)||(23829-23887)
[»] scaffold0014 (1 HSPs)
scaffold0014 (214-299)||(189630-189713)
[»] scaffold0315 (1 HSPs)
scaffold0315 (5-41)||(18329-18365)
[»] scaffold0213 (2 HSPs)
scaffold0213 (5-41)||(28593-28629)
scaffold0213 (160-196)||(18958-18994)
[»] scaffold0076 (1 HSPs)
scaffold0076 (5-41)||(38499-38535)
[»] scaffold0035 (1 HSPs)
scaffold0035 (124-196)||(43960-44031)
[»] scaffold0031 (1 HSPs)
scaffold0031 (92-196)||(127518-127621)
[»] scaffold0231 (1 HSPs)
scaffold0231 (4-55)||(17983-18034)
[»] scaffold0174 (1 HSPs)
scaffold0174 (1-44)||(20397-20440)
[»] scaffold0468 (1 HSPs)
scaffold0468 (3-57)||(11528-11582)
[»] scaffold0454 (1 HSPs)
scaffold0454 (1-55)||(202-256)
[»] scaffold0401 (1 HSPs)
scaffold0401 (1-55)||(8506-8560)
[»] scaffold0363 (1 HSPs)
scaffold0363 (1-55)||(9867-9921)
[»] scaffold0254 (1 HSPs)
scaffold0254 (1-55)||(21374-21428)
[»] scaffold0230 (1 HSPs)
scaffold0230 (1-55)||(14573-14627)
[»] scaffold0086 (1 HSPs)
scaffold0086 (158-196)||(35659-35697)
[»] scaffold0039 (1 HSPs)
scaffold0039 (5-55)||(10241-10291)
[»] scaffold1354 (1 HSPs)
scaffold1354 (1-34)||(233-266)
[»] scaffold0149 (1 HSPs)
scaffold0149 (152-205)||(21375-21428)
[»] scaffold0407 (1 HSPs)
scaffold0407 (1-33)||(11608-11640)
[»] scaffold0040 (1 HSPs)
scaffold0040 (157-205)||(106325-106373)


Alignment Details
Target: chr5 (Bit Score: 291; Significance: 1e-163; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 1 - 323
Target Start/End: Complemental strand, 41875959 - 41875637
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  41875959 acgtgtgaaaaagacgcaagaacgcgaaacagaggatgctgtcaaagtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacagacag 41875860  T
Q  101 ctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtct 200  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41875859 ctctacgggaacatgccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacagtct 41875760  T
Q  201 gaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaag 300  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  41875759 gaacatcgattcttaacacaattgccatggtttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaac 41875660  T
Q  301 tatgctaaaccaaaatcagaatt 323  Q
    |||||||||||||||||||||||    
T  41875659 tatgctaaaccaaaatcagaatt 41875637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 4 - 323
Target Start/End: Original strand, 9776794 - 9777113
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctc 103  Q
    ||||||||||||| ||||||||||||| || |||||||||   |||||||||||||||||||||||||||| |||||||||||||||||||  ||| | |    
T  9776794 tgtgaaaaagacggaagaacgcgaaactggtgatgctgtctctgtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 9776893  T
Q  104 tacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaa 203  Q
    ||||||||||   |||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||| ||||||    
T  9776894 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgtttattctacaatctgaa 9776993  T
Q  204 catcgattcttaacacaattgccacggtttctacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaagtat 303  Q
    ||||||||||||||| ||||| || | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  9776994 catcgattcttaacataattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactat 9777093  T
Q  304 gctaaaccaaaatcagaatt 323  Q
    |||||| |||||||||||||    
T  9777094 gctaaatcaaaatcagaatt 9777113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 4 - 323
Target Start/End: Complemental strand, 37804436 - 37804117
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctc 103  Q
    |||||||||||||||||||||||||||||| |||||||||   ||| ||||||||||||||||| |||||| |||||||||||||||||||  ||| | |    
T  37804436 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtacgtttactcgctgtggcgagttgcgacgaacaaccc 37804337  T
Q  104 tacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaa 203  Q
    ||||||||||   |||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||| |||| |||||||||| ||||||    
T  37804336 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctacaatctgaa 37804237  T
Q  204 catcgattcttaacacaattgccacggtttctacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaagtat 303  Q
    ||||||||||||||||||||| || | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||    
T  37804236 catcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttctactagaactat 37804137  T
Q  304 gctaaaccaaaatcagaatt 323  Q
    |||||| |||||||||||||    
T  37804136 gctaaatcaaaatcagaatt 37804117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 33472930 - 33472674
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  33472930 acgtgtgaaaaagacgcaagaacgcgaaataggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacagacaa 33472831  T
Q  101 ctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtct 200  Q
    |||||||||||||   |||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||  ||    
T  33472830 ctctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaatcccaaatttgataggaaacttaacctatgattattctacaacct 33472731  T
Q  201 gaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    ||||||| ||||||||||||||| | | ||||||||||||||||||| ||| |||||    
T  33472730 gaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 33472674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 4 - 257
Target Start/End: Complemental strand, 27868938 - 27868685
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctc 103  Q
    ||||||||||||||||||||| |||||||| ||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||    
T  27868938 tgtgaaaaagacgcaagaacgtgaaacaggtgatgctgtcactgtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacagacaactc 27868839  T
Q  104 tacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaa 203  Q
    ||||||||||   |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||  |||||    
T  27868838 tacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaa 27868739  T
Q  204 catcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    |||| ||||||||||||||| | | ||||||||||||||||||| ||| |||||    
T  27868738 catcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 27868685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 29448524 - 29448738
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||| |||||||||||| ||||     
T  29448524 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgttgtcaaagtgcagctcgcgaggcgagtaggtttactcgctgtagcgagttgcgacggacaa 29448623  T
Q  101 ctctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtc 199  Q
     ||||||||||||   |||||| ||  |||||| ||| |  ||||||| ||||||| | ||||||||| |||||||| |||||||| ||||||||||| |    
T  29448624 atctacgggaacagaccagttttcactccaaaagcccca-atttcatcaactcaaatctcaaatttgataggaaactcaacctatgtttattctacagcc 29448722  T
Q  200 tgaacatcgattctta 215  Q
    ||||| || |||||||    
T  29448723 tgaacttcaattctta 29448738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 17011412 - 17011626
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||| ||||     
T  17011412 acgtgtgaaaaagacgcaagaacatgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttactcgcggtggcgacttgcgacggacaa 17011511  T
Q  101 ctctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtc 199  Q
     ||||||||||||   |||||| ||  || ||| ||| |  ||||||| || |||| ||||||||||| |||||||| |||||||| ||||||||||| |    
T  17011512 atctacgggaacagaccagttttcactcctaaagcccca-atttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcc 17011610  T
Q  200 tgaacatcgattctta 215  Q
    ||||| || |||||||    
T  17011611 tgaacttcaattctta 17011626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 141 - 257
Target Start/End: Original strand, 18419277 - 18419393
Alignment:
Q  141 tttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacact 240  Q
    ||||||| || |||| | ||||||||| ||||||||||| ||||||||||||||||  ||||||||| ||||||||||||||| | | ||||||||||||    
T  18419277 tttcatctacccaaatctcaaatttgataggaaacttaatctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctacact 18419376  T
Q  241 tttcaatacaagaatca 257  Q
    ||||||| ||| |||||    
T  18419377 tttcaattcaaaaatca 18419393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 263551 - 263633
Alignment:
Q  8 aaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttg 90  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||| |  ||||||||||||    
T  263551 aaaaagacgcaagaacacgaaacaggggatgatgtcaaagtgcagctcgcgaagcgagtaagtttactccttgtggcgagttg 263633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 22412930 - 22413015
Alignment:
Q  159 caaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||  || |||||||||||||||||||||||||   | |||||| ||||||||||||||| ||| ||||||||||||||||    
T  22412930 caaatttgttagaaaacttaacctatgattattctacaacataaacatcaattcttaacacaattaccatggtttctacacttttc 22413015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 323
Target Start/End: Original strand, 7786099 - 7786188
Alignment:
Q  232 ttctacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaagtatgctaaaccaaaatcagaatt 323  Q
    ||||||||| || ||| ||| ||||||||||  ||||||||||||||||||||||||||||||| |||   |||||||||||||| ||||||    
T  7786099 ttctacactctttaattcaaaaatcatactc--aaaacctaacccccaattcccaatttcaactggaaccctgctaaaccaaaattagaatt 7786188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 24594290 - 24594218
Alignment:
Q  141 tttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattct 213  Q
    ||||||| || |||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||    
T  24594290 tttcatctacccaaaccccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaattct 24594218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 24668382 - 24668312
Alignment:
Q  143 tcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattct 213  Q
    ||||| || |||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||    
T  24668382 tcatctacccaaaccccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaattct 24668312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 24738151 - 24738081
Alignment:
Q  143 tcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattct 213  Q
    ||||| || |||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||    
T  24738151 tcatctacccaaaccccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaattct 24738081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 24750920 - 24750850
Alignment:
Q  143 tcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattct 213  Q
    ||||| || |||||||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||    
T  24750920 tcatctacccaaaccccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaattct 24750850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 320
Target Start/End: Original strand, 26707296 - 26707379
Alignment:
Q  235 tacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaagtatgctaaaccaaaatcaga 320  Q
    |||||| || ||| ||| ||||||||||  |||||||||| ||||||||||||||||||||||||   ||||||||||||||||||    
T  26707296 tacactatttaattcaaaaatcatactc--aaaacctaactcccaattcccaatttcaactagaaccttgctaaaccaaaatcaga 26707379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 320
Target Start/End: Original strand, 26977030 - 26977113
Alignment:
Q  235 tacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaagtatgctaaaccaaaatcaga 320  Q
    |||||| || ||| ||| ||||||||||  |||||||||| ||||||||||||||||||||||||   ||||||||||||||||||    
T  26977030 tacactatttaattcaaaaatcatactc--aaaacctaactcccaattcccaatttcaactagaaccttgctaaaccaaaatcaga 26977113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 207
Target Start/End: Original strand, 21503947 - 21504029
Alignment:
Q  124 cagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatc 207  Q
    ||||||||||||||||||| || |||| |||| ||||||||  | |||||||| |||||||||||||||||||  |||||||||    
T  21503947 cagccaaaaacccaatttt-caaccacccaaatcccaaattcaataggaaactcaacctatgattattctacaacctgaacatc 21504029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 17909157 - 17909193
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    |||||||||||||||||||||||||||||||||||||    
T  17909157 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 17909193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 265873 - 265936
Alignment:
Q  152 caaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattctta 215  Q
    |||| ||||||||||| |||||||| |||||||| ||||||||||| |||||| || |||||||    
T  265873 caaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattctta 265936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 196
Target Start/End: Complemental strand, 36508955 - 36508916
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctaca 196  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  36508955 cccaaatttgataggaaacttaacctatgattattctaca 36508916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 8833573 - 8833519
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||||||||||||  |||||||| ||||||||||  |||||||||    
T  8833573 acgtgtgaaaaagacgcaagaacatgaaacaggagatgctgtcattgtgcagctc 8833519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 26749717 - 26749771
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||||||||||||  |||||||| ||||||||||  |||||||||    
T  26749717 acgtgtgaaaaagacgcaagaacatgaaacaggagatgctgtcactgtgcagctc 26749771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 7425001 - 7425053
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgc 57  Q
    |||||||||| |||||||||||||||||||| ||||||||  ||| |||||||    
T  7425001 gtgaaaaagatgcaagaacgcgaaacagggggtgctgtcactgtgaagctcgc 7425053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 21933228 - 21933192
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    ||||||||||||||||||||||||||||| |||||||    
T  21933228 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 21933192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 21939398 - 21939362
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    ||||||||||||||||||||||||||||| |||||||    
T  21939398 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 21939362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 22883886 - 22883850
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    |||||||| ||||||||||||||||||||||||||||    
T  22883886 gtgaaaaatacgcaagaacgcgaaacaggggatgctg 22883850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 36990624 - 36990588
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    ||||||||||||||||||||||||||||| |||||||    
T  36990624 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 36990588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 34
Target Start/End: Complemental strand, 1627745 - 1627714
Alignment:
Q  3 gtgtgaaaaagacgcaagaacgcgaaacaggg 34  Q
    ||||||||||||||||||||||||||||||||    
T  1627745 gtgtgaaaaagacgcaagaacgcgaaacaggg 1627714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 194
Target Start/End: Original strand, 20313050 - 20313152
Alignment:
Q  92 gacagacagctctacgggaacatgtcag-tttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattat 190  Q
    |||||||||||||||||||| |   ||| ||| ||||||||||||||| |||||| |||| |||| ||||||||  | |||||||| || ||||| ||||    
T  20313050 gacagacagctctacgggaagaaaccagtttttcagccaaaaacccaa-ttttcaaccacccaaatcccaaattcaataggaaactcaatctatgtttat 20313148  T
Q  191 tcta 194  Q
    ||||    
T  20313149 tcta 20313152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 26762087 - 26762141
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||||||||||||   ||||||| ||||||||||  |||||||||    
T  26762087 acgtgtgaaaaagacgcaagaacataaaacaggagatgctgtcactgtgcagctc 26762141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 30138295 - 30138245
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaacatc 207  Q
    ||||||||||   |||||||||||||||||||||||||||  |||||||||    
T  30138295 cccaaatttgtttggaaacttaacctatgattattctacaacctgaacatc 30138245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 22337006 - 22337051
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaa 46  Q
    ||||||||||||||| ||||||||||||| | || |||||||||||    
T  22337006 acgtgtgaaaaagacacaagaacgcgaaataaggaatgctgtcaaa 22337051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 22750627 - 22750672
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaa 46  Q
    ||||||||||||||| ||||||||||||| | || |||||||||||    
T  22750627 acgtgtgaaaaagacacaagaacgcgaaataaggaatgctgtcaaa 22750672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 24276972 - 24276939
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  24276972 acgtgtgaaaaagacgcaagaacacgaaacaggg 24276939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 24385241 - 24385274
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggg 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  24385241 acgtgtgaaaaagacgcaagaacacgaaacaggg 24385274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 16604970 - 16604930
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    |||||||||||||||||||||||  ||||||||| ||||||    
T  16604970 acgtgtgaaaaagacgcaagaacatgaaacagggtatgctg 16604930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 35581464 - 35581500
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    |||||||||| |||||||||||||||||| |||||||    
T  35581464 gtgaaaaagatgcaagaacgcgaaacaggagatgctg 35581500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 248; Significance: 1e-137; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 40 - 323
Target Start/End: Complemental strand, 13101062 - 13100779
Alignment:
Q  40 tgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctctacgggaacatgtcagtttccagccaaaaacccaat 139  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  13101062 tgtcaaagtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacagacatctctacgggaacatgccagtttccagccaaaaacccaat 13100963  T
Q  140 ttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacac 239  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13100962 ttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccatggtttctacac 13100863  T
Q  240 ttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaagtatgctaaaccaaaatcagaatt 323  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  13100862 ttttcaatccaagaatcatactccaaaaacctaacccccaattcacaatttcaactagaactatgctaaaccaaaatcagaatt 13100779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 4 - 323
Target Start/End: Complemental strand, 10684296 - 10683977
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctc 103  Q
    |||||||||||||||||||||||||||||| |||||||||   ||| |||||||||||||||||||||||| |||||||||||||||||||  ||| | |    
T  10684296 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 10684197  T
Q  104 tacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaa 203  Q
    ||||||||||   |||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||| |||| |||||||||| ||||||    
T  10684196 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctacaatctgaa 10684097  T
Q  204 catcgattcttaacacaattgccacggtttctacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaagtat 303  Q
    ||||||||||||||||||||| || | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  10684096 catcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactat 10683997  T
Q  304 gctaaaccaaaatcagaatt 323  Q
    |||||| |||||||||||||    
T  10683996 gctaaatcaaaatcagaatt 10683977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 4 - 323
Target Start/End: Original strand, 20261848 - 20262167
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctc 103  Q
    ||||||||||||| |||||||||||||||| |||||||||   |||||||||||||||||||||||||||| |||||||||||||||||||  ||| | |    
T  20261848 tgtgaaaaagacggaagaacgcgaaacaggtgatgctgtctctgtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 20261947  T
Q  104 tacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaa 203  Q
    ||||||||||   |||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||| |||| |||||||||| ||||||    
T  20261948 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctacaatctgaa 20262047  T
Q  204 catcgattcttaacacaattgccacggtttctacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaagtat 303  Q
    ||||||||||||||||||||| || | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  20262048 catcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactat 20262147  T
Q  304 gctaaaccaaaatcagaatt 323  Q
    |||||| |||||||||||||    
T  20262148 gctaaatcaaaatcagaatt 20262167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 23338766 - 23338478
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||  |||     
T  23338766 acgtgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtcactgtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaa 23338667  T
Q  101 ctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtct 200  Q
    |||||||||||||   |||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||| ||||||||||  ||    
T  23338666 ctctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaacct 23338567  T
Q  201 gaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatt 289  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  23338566 gaacatcgattcttaacacaattgccatggtttctacacttttcaattcaagaatcatactcccaaaacctaacccccaattcccaatt 23338478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 25183873 - 25184087
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||| ||||     
T  25183873 acgtgtgaaaaagacgcaagaacgcgaaacaagggatgctgtcaaagtgtagctcgcgaggcgagtaagtgtactcgctgtggcgagttgcgacggacaa 25183972  T
Q  101 ctctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtc 199  Q
     ||||||||||||   |||||| ||  |||||| ||| |  ||||||| || |||| ||||||||||| |||||||| |||||||| |||||||||||||    
T  25183973 atctacgggaacagaccagttttcactccaaaagcccca-atttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagtc 25184071  T
Q  200 tgaacatcgattctta 215  Q
    ||||| || |||||||    
T  25184072 tgaacttcaattctta 25184087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 31345805 - 31346061
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||||||||||| ||||||||| ||| ||||| | |||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||| ||||     
T  31345805 acgtgtgaaaaaaacgcaagaatgcggaacagagaatgctgtcaaagtgtagctcgcgaggcgagtaagtgtactcgctgtggcgagttgcgacggacaa 31345904  T
Q  101 ctctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtc 199  Q
     ||||||||||||   |||||| ||  |||||| ||| |  ||||||| || ||||  |||||||||| |||||||| |||||||| |||||||| || |    
T  31345905 atctacgggaacagaccagttttcactccaaaagcccca-atttcatcaacccaaataccaaatttgataggaaactcaacctatgtttattctatagcc 31346003  T
Q  200 tgaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    ||||| || ||||||||||||||| | | ||||||||||||||||||| ||| |||||    
T  31346004 tgaacttcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 31346061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 18358335 - 18358121
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||| | ||||||||||||||||| ||||     
T  18358335 acgtgtgaaaaagacgcaagaacgcgaaataggggatgctgtcaaagtgcaactcgcgaggcgggtaagtttactcactgtggcgagttgcgacggacaa 18358236  T
Q  101 ctctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtc 199  Q
     ||||||||||||   |||||| ||  |||||| ||| |  ||||||| || |||| ||||||||||| |||||||| |||||||| ||||||||||| |    
T  18358235 atctacgggaacaaaccagttttcactccaaaagcccca-atttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcc 18358137  T
Q  200 tgaacatcgattctta 215  Q
    ||||| || |||||||    
T  18358136 tgaacttcaattctta 18358121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 141 - 285
Target Start/End: Complemental strand, 20590509 - 20590365
Alignment:
Q  141 tttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacact 240  Q
    ||||||| || |||||||||||||||| || ||||||||||||||||||||||||   ||||||||| ||||||||||||||||||| ||||||||||||    
T  20590509 tttcatctacccaaaccccaaatttgatagaaaacttaacctatgattattctaccacctgaacatcaattcttaacacaattgccatggtttctacact 20590410  T
Q  241 tttcaatacaagaatcatactccaaaaacctaacccccaattccc 285  Q
    ||||||| ||| ||||||||||| |||||||||||||||||||||    
T  20590409 tttcaatccaataatcatactcccaaaacctaacccccaattccc 20590365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 21081337 - 21081123
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||| || |     
T  21081337 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcaactcgcgaggcgagtaagtttactcgctgtggcgagtggcgacggaaaa 21081238  T
Q  101 ctctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtc 199  Q
     |||||||||| |   | |||| ||  |||||| ||| |  ||||||| || |||| || |||||||| |||||||| ||| |||| ||||||||||| |    
T  21081237 atctacgggaaaagacccgttttcactccaaaagcccca-atttcatcaacccaaatcctaaatttgataggaaactcaacttatgtttattctacagcc 21081139  T
Q  200 tgaacatcgattctta 215  Q
    ||||| || |||||||    
T  21081138 tgaacttcaattctta 21081123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 21915311 - 21915522
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctc 103  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||| ||| ||||||||||||||| ||||  |     
T  21915311 tgtgaaaaagatgcaagaacgcgaaacaggggatgatgtcaaagtgcagatcgcgaggcgagtatgtttactcgccgtggcgagttgcgacggacaaatg 21915410  T
Q  104 tacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctga 202  Q
    || |||||||   |||||| ||  |||||| ||| |  ||||||| ||  ||| ||||||||| | |||||||| |||||||| ||||||||||| ||||    
T  21915411 tatgggaacaaaccagttttcactccaaaagcccca-atttcatcaacctaaatcccaaattttataggaaactcaacctatgtttattctacagcctga 21915509  T
Q  203 acatcgattctta 215  Q
    || || |||||||    
T  21915510 acttcaattctta 21915522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 130 - 257
Target Start/End: Complemental strand, 21072926 - 21072799
Alignment:
Q  130 aaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacg 229  Q
    ||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||  ||||||||| ||||||||||||||| | | |    
T  21072926 aaaacccaaattttcatccacccaaaccccaaatttgataggaaacttaacctatgattattccacaacctgaacatcaattcttaacacaatttcgatg 21072827  T
Q  230 gtttctacacttttcaatacaagaatca 257  Q
    |||| ||||||||||||| ||| |||||    
T  21072826 gtttttacacttttcaattcaaaaatca 21072799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 141 - 257
Target Start/End: Complemental strand, 41301156 - 41301040
Alignment:
Q  141 tttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacact 240  Q
    ||||||| || |||| ||||| ||||| ||||||||||||||||||||||||||||  ||||||||| ||||||||||||||| | | ||||||||||||    
T  41301156 tttcatctacccaaatcccaattttgataggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctacact 41301057  T
Q  241 tttcaatacaagaatca 257  Q
    ||||||| ||| |||||    
T  41301056 tttcaattcaaaaatca 41301040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 43707258 - 43707171
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||||| ||||||||||||||||||||||||||||   |||||||| ||||||||||||||||||| ||||||||||||||||    
T  43707258 cccaaatttgataggaaacttaacctatgattattctacaacttgaacatcaattcttaacacaattgccatggtttctacacttttc 43707171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 22173188 - 22173101
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||||  || |||| ||||||||||||||||||||  ||||||||| ||||||||||||||| ||| ||||||||||||||||    
T  22173188 cccaaatttgttagaaaacataacctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 22173101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 7187267 - 7187354
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||||  ||||||||||| ||||||||||||||||  | ||||||| |||||||||||||||  || ||||||||||||||||    
T  7187267 cccaaatttgttaggaaacttaatctatgattattctacaaccagaacatcaattcttaacacaattatcatggtttctacacttttc 7187354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 265 - 323
Target Start/End: Original strand, 25652174 - 25652232
Alignment:
Q  265 aaaacctaacccccaattcccaatttcaactagaagtatgctaaaccaaaatcagaatt 323  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||||||||||||    
T  25652174 aaaacctaacccccaattcccaatttcaactagaatcttgctaaaccaaaatcagaatt 25652232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 29113999 - 29114053
Alignment:
Q  3 gtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgc 57  Q
    |||||||||||||||||||||||||||||||||||| |||||  |||||||||||    
T  29113999 gtgtgaaaaagacgcaagaacgcgaaacaggggatgttgtcactgtgcagctcgc 29114053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 149734 - 149670
Alignment:
Q  141 tttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaaca 205  Q
    ||||||| || |||| ||||||||||| |||||||||||||||||||||||| ||| ||||||||    
T  149734 tttcatctacccaaatcccaaatttgataggaaacttaacctatgattattcaacaatctgaaca 149670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 28345277 - 28345209
Alignment:
Q  127 ccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctaca 196  Q
    |||||||||||| |||| ||| ||  ||| ||||||||||| ||||||||||||||||||||||||||||    
T  28345277 ccaaaaacccaaatttt-atctacctaaatcccaaatttgataggaaacttaacctatgattattctaca 28345209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 23778657 - 23778621
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    |||||||||||||||||||||||||||||||||||||    
T  23778657 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 23778621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 24686583 - 24686547
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    |||||||||||||||||||||||||||||||||||||    
T  24686583 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 24686547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 196
Target Start/End: Complemental strand, 1383864 - 1383825
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctaca 196  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  1383864 cccaaatttgataggaaacttaacctatgattattctaca 1383825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 11232198 - 11232162
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    ||||||||||||||||||||||||||||| |||||||    
T  11232198 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 11232162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 21316025 - 21315973
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcg 56  Q
    |||| |||||||||||||||| ||||||||| |||||||||||| ||| ||||    
T  21316025 tgtgcaaaagacgcaagaacgtgaaacagggcatgctgtcaaagagcaactcg 21315973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 22514045 - 22514009
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    ||||||||||||||||||||||||||||| |||||||    
T  22514045 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 22514009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 28776647 - 28776611
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    ||||||||||||||||||||||||||||| |||||||    
T  28776647 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 28776611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 36734664 - 36734616
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaaca 205  Q
    ||||||||||| ||||||||||||||| ||||||||||||  |||||||    
T  36734664 cccaaatttgataggaaacttaacctaagattattctacaacctgaaca 36734616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 24161179 - 24161262
Alignment:
Q  214 taacacaattgccacggtttctacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaa 299  Q
    |||||| ||||||| ||||| |||||| || ||| ||| ||||||| ||  |||| ||||||||||||| |||| |||||||||||    
T  24161179 taacaccattgccatggtttttacactctttaattcaaaaatcataatc--aaaatctaacccccaatttccaaattcaactagaa 24161262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 22255902 - 22255938
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    |||||||||| |||||||||||||| |||||||||||    
T  22255902 gtgaaaaagatgcaagaacgcgaaataggggatgctg 22255938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 239; Significance: 1e-132; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 323
Target Start/End: Original strand, 54521448 - 54521770
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||     
T  54521448 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaa 54521547  T
Q  101 ctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtct 200  Q
    |||||||| ||||   |||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||  |||||||||| |||    
T  54521548 ctctacggaaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatatttattctacaatct 54521647  T
Q  201 gaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaag 300  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||     
T  54521648 gaacatcgattcttaacacaattgccatggtttctacacttttcaatccaagaatcatactccaaaaacctaaccctcaatttccaatttcaactagaac 54521747  T
Q  301 tatgctaaaccaaaatcagaatt 323  Q
    ||||||||||||| |||||||||    
T  54521748 tatgctaaaccaagatcagaatt 54521770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 4 - 323
Target Start/End: Original strand, 12305751 - 12306070
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctc 103  Q
    |||||||||||||||||||||||||||||| |||||||||   |||||||||||||||||||||||||||| |||||||||||||||||||  ||| | |    
T  12305751 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 12305850  T
Q  104 tacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaa 203  Q
    ||||||||||   |||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||| |||||||||| ||||||    
T  12305851 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 12305950  T
Q  204 catcgattcttaacacaattgccacggtttctacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaagtat 303  Q
    ||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  12305951 catcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactat 12306050  T
Q  304 gctaaaccaaaatcagaatt 323  Q
    ||||||||||||||||||||    
T  12306051 gctaaaccaaaatcagaatt 12306070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 82 - 323
Target Start/End: Original strand, 3803580 - 3803821
Alignment:
Q  82 ggcgagttgcgacagacagctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacc 181  Q
    |||||||||||||||||| |||||||||||||   |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||    
T  3803580 ggcgagttgcgacagacaactctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacc 3803679  T
Q  182 tatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatcatactccaaaaacctaacccccaat 281  Q
    |||| |||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3803680 tatgtttattctacaatctgaacatcgattcttaacacaattgtcatggtttctacacttttcaattcaagaatcatactccaaaaacctaacccccaat 3803779  T
Q  282 tcccaatttcaactagaagtatgctaaaccaaaatcagaatt 323  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  3803780 tcccaatttcaactagaactatgctaaaccaaaatcagaatt 3803821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 42213 - 42469
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||     
T  42213 acgtgtgaaaaagacgcaagaacacgaaataggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttactcgctgtggcgagtttcgacagacaa 42312  T
Q  101 ctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtct 200  Q
    |||||||||||||   |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||  ||    
T  42313 ctctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacct 42412  T
Q  201 gaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    ||||||| ||||||||||||||| | | ||||||||||||||||||| ||| |||||    
T  42413 gaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 42469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 16324907 - 16324651
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  16324907 acgtgtgaaaaagacgcaagaatgcgaaacaggggatgctgtcaaagtgtagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacagacaa 16324808  T
Q  101 ctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtct 200  Q
    |||||||||||||   |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||| |||||||||||  ||    
T  16324807 ctctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaagctataattattctacaacct 16324708  T
Q  201 gaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    ||||||| ||||||||||||||| | | |||||||||||||| |||| ||| |||||    
T  16324707 gaacatcaattcttaacacaatttcaatggtttctacactttccaattcaaaaatca 16324651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 82 - 323
Target Start/End: Complemental strand, 29544319 - 29544078
Alignment:
Q  82 ggcgagttgcgacagacagctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacc 181  Q
    ||||||||| |||  ||| | |||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  29544319 ggcgagttgtgacgaacaaccctacgggaacagaccagttttcagccaaaaacccaatttttcatccactcaaaccccaaatttgataggaaactcaacc 29544220  T
Q  182 tatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatcatactccaaaaacctaacccccaat 281  Q
    |||| |||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  29544219 tatgtttattctacaatctgaacatcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatcataccccaaaaacctaacccccaat 29544120  T
Q  282 tcccaatttcaactagaagtatgctaaaccaaaatcagaatt 323  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  29544119 tcccaatttcaactagaactatgctaaaccaaaatcagaatt 29544078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 4 - 257
Target Start/End: Original strand, 13436927 - 13437180
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctc 103  Q
    |||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||  ||| |||    
T  13436927 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtcactgtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaactc 13437026  T
Q  104 tacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaa 203  Q
    || |||||||   |||||| ||||||||||||||||||||||| ||| |||||||||||||||| |||||||| |||||||| ||||||||||  |||||    
T  13437027 tatgggaacagaccagttttcagccaaaaacccaatttttcattcacccaaaccccaaatttgataggaaactcaacctatgtttattctacaacctgaa 13437126  T
Q  204 catcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    |||||||||||||||||||| |   ||||||||||||||||||| ||| |||||    
T  13437127 catcgattcttaacacaatttcgttggtttctacacttttcaattcaaaaatca 13437180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 141 - 323
Target Start/End: Complemental strand, 55291828 - 55291646
Alignment:
Q  141 tttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacact 240  Q
    ||||||| || |||||||||||||||| ||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||| ||||||||||||    
T  55291828 tttcatcaacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattgccatggtttctacact 55291729  T
Q  241 tttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaagtatgctaaaccaaaatcagaatt 323  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  55291728 tttcaatccaagaatcatactcccaaaacctaacccccaattcccaatttcaactagaactattctaaaccaaaatcagaatt 55291646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 153 - 323
Target Start/End: Complemental strand, 46722801 - 46722631
Alignment:
Q  153 aaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttcaatacaag 252  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||  ||||| |||||||||||| ||||    
T  46722801 aaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattgccatagtttccacacttttcaatccaag 46722702  T
Q  253 aatcatactccaaaaacctaacccccaattcccaatttcaactagaagtatgctaaaccaaaatcagaatt 323  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  46722701 aatcatactcccaaaacctaacccccaattcccaatttcaactagaactattctaaaccaaaatcagaatt 46722631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 4 - 257
Target Start/End: Original strand, 5224012 - 5224264
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctc 103  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||  ||    
T  5224012 tgtgaaaaagacgcaagaacgcgaaacaggaaatgctgtcaaagtgcagctcacgaggcgagtaagtgtactcgctgtggcgagttgcgacagacaaatc 5224111  T
Q  104 tacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctga 202  Q
    ||||||||||    ||||| ||  |||||| |||||  ||||||| || |||| ||||||||||| |||||||| |||||||| ||||||||||| ||||    
T  5224112 tacgggaacaaactagttttcactccaaaaccccaa--tttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctga 5224209  T
Q  203 acatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    || || ||||||||||||||| | | ||||||||||||||||||| ||| |||||    
T  5224210 acttcaattcttaacacaatttcaatggtttctacacttttcaattcaaaaatca 5224264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 26054801 - 26054545
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||| ||||     
T  26054801 acgtgtgaaaaagacgcaagaacgcgaaactgggaatgctgtcaaagtgcagctcgcgaggcgagtaagtgtacttgctgtggcgagttgcgacggacaa 26054702  T
Q  101 ctctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtc 199  Q
     |||||| |||||   |||||| ||  |||||| ||| |  ||||||| || |||| ||||||||||| |||||||| |||||||| ||||||||||| |    
T  26054701 atctacgagaacagaccagttttcactccaaaagcccca-atttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcc 26054603  T
Q  200 tgaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    ||||| || ||||||||||||||| | | |||||||||| |||||||| ||| |||||    
T  26054602 tgaacttcaattcttaacacaatttcgatggtttctacaattttcaattcaaaaatca 26054545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 16979596 - 16979810
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||     
T  16979596 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttacgacagacaa 16979695  T
Q  101 ctctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtc 199  Q
     ||||||||||||   |||||| ||  |||||| ||| |  ||||||| || ||||  |||||||||| |||||||| |||||||| ||||||||||| |    
T  16979696 atctacgggaacagaccagttttcactccaaaagcccca-atttcatcaacccaaattccaaatttgataggaaactcaacctatgtttattctacagcc 16979794  T
Q  200 tgaacatcgattctta 215  Q
    ||||| || |||||||    
T  16979795 tgaacttcaattctta 16979810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 4 - 189
Target Start/End: Complemental strand, 14641913 - 14641729
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctc 103  Q
    |||||||||||||||||||| ||||  |||| |||||||||   ||||||||||||||||||||| ||||  |||||||||||||||||||||||||| |    
T  14641913 tgtgaaaaagacgcaagaacacgaat-agggtatgctgtcactatgcagctcgcgaggcgagtaaatttattcgctgtggcgagttgcgacagacagcac 14641815  T
Q  104 tacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgatta 189  Q
    | ||||||||   |||||| ||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||    
T  14641814 tgcgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaatcccaaatttgataggaaacttaacctatgatta 14641729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 15465780 - 15466036
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||| |||||||| | |||||||| ||||     
T  15465780 acgtgtgaaaaagacgaaagaacgcgaaacagggaatgctgtcaaagtgaagctcgcgaggcgagtaagtgtactcgctgtggtgggttgcgacggacaa 15465879  T
Q  101 ctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtct 200  Q
     |||||| |||||   |||||| ||  | |||| ||    ||||||| || |||| |||| |||||| |||||||| |||||||| ||||||||||| ||    
T  15465880 atctacgagaacagaccagttttcactctaaaagccccaatttcatcaacccaaatcccatatttgataggaaactcaacctatgtttattctacagcct 15465979  T
Q  201 gaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    |||| || ||||||||||||||| | | ||||||||||||||||||| ||| |||||    
T  15465980 gaacttcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 15466036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 153 - 289
Target Start/End: Original strand, 10555144 - 10555280
Alignment:
Q  153 aaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttcaatacaag 252  Q
    ||||||||||||||| |||||||||||||||||||||||||||   ||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||    
T  10555144 aaaccccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaattcttaacacaattgccatggtttctacacttttcaatccaag 10555243  T
Q  253 aatcatactccaaaaacctaacccccaattcccaatt 289  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  10555244 aatcatactcccaaaacctaaaccccaattcccaatt 10555280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 22652458 - 22652671
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||| || ||||     
T  22652458 acgtgtgaaaaat-cgcaagaacgcgaaacaggggatgctgtcaaagtgtagctcgcgaggcgagtaagtgtactcgctgtggcgagttgcaacggacaa 22652556  T
Q  101 ctctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtc 199  Q
     ||||||||||||    ||||| ||  |||||| ||| |  ||||||| || |||| ||||||||||| |||||||| |||||||| ||||||||||| |    
T  22652557 atctacgggaacagactagttttcactccaaaagcccca-atttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcc 22652655  T
Q  200 tgaacatcgattctta 215  Q
    ||||| || |||||||    
T  22652656 tgaacttcaattctta 22652671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 141 - 247
Target Start/End: Complemental strand, 43549882 - 43549776
Alignment:
Q  141 tttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacact 240  Q
    ||||||| || |||| ||||||||||| ||||||||||||||||||||||||||||  ||||||||| ||||||||||||||| | | ||||||||||||    
T  43549882 tttcatctacccaaatcccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctacact 43549783  T
Q  241 tttcaat 247  Q
    |||||||    
T  43549782 tttcaat 43549776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 130 - 223
Target Start/End: Original strand, 18890238 - 18890331
Alignment:
Q  130 aaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaatt 223  Q
    ||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||  ||||||||| |||||||||||||||    
T  18890238 aaaacccaaattttcatccacccaaaccccaaatttgataggaaacttaacctatgattattccacaacctgaacatcaattcttaacacaatt 18890331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 10833516 - 10833416
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatc 256  Q
    ||||||||||| ||||||||||||||||||||||||| || |||| ||||| ||||||||||||||| | | ||||||||||||||||||| ||| ||||    
T  10833516 cccaaatttgataggaaacttaacctatgattattctgcaatctggacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatc 10833417  T
Q  257 a 257  Q
    |    
T  10833416 a 10833416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 130 - 257
Target Start/End: Original strand, 18893497 - 18893623
Alignment:
Q  130 aaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacg 229  Q
    ||||||||| ||||||||||| |||||||||||||||| || ||||||||||||||||||||| |||   |||||||| ||||||||||||||| | |      
T  18893497 aaaacccaaattttcatccacccaaaccccaaatttgatagaaaacttaacctatgattattccacaacgtgaacatcaattcttaacacaattacga-t 18893595  T
Q  230 gtttctacacttttcaatacaagaatca 257  Q
    |||| ||||||||||||| ||| |||||    
T  18893596 gtttttacacttttcaattcaaaaatca 18893623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 6820011 - 6820098
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||||  ||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||  |||||||||||||||    
T  6820011 cccaaatttgttaggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattgacatagtttctacacttttc 6820098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 50243656 - 50243741
Alignment:
Q  159 caaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||  ||||||||||||||||||||||||||||   |||||||| ||||||||||||||| ||| ||||||||||||||||    
T  50243656 caaatttgttaggaaacttaacctatgattattctacaacatgaacatcaattcttaacacaattaccatggtttctacacttttc 50243741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 24152581 - 24152509
Alignment:
Q  171 gaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacactttt 243  Q
    ||||||||||||||||||||||||||  ||||||||| ||||||||||||||| ||| |||||||||||||||    
T  24152581 gaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacactttt 24152509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 223 - 323
Target Start/End: Original strand, 15238969 - 15239067
Alignment:
Q  223 tgccacggtttctacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaagtatgctaaaccaaaatcagaat 322  Q
    ||||| || ||||||||| || ||| ||| ||||||||||  |||||||||||||||||||||||||| ||||||||   ||||||||||||||||||||    
T  15238969 tgccatggattctacactctttaattcaaaaatcatactc--aaaacctaacccccaattcccaattttaactagaaccttgctaaaccaaaatcagaat 15239066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 16643926 - 16644011
Alignment:
Q  159 caaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||  ||||| ||||||||||||||||||||||  ||||||||| |||||||||||||||  || ||||||||||||||||    
T  16643926 caaatttgttaggaagcttaacctatgattattctacaacctgaacatcaattcttaacacaattatcatggtttctacacttttc 16644011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 43929227 - 43929319
Alignment:
Q  152 caaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    |||| ||||||||||| ||||||||||||||| ||||||||||||  || |||||| | |||||||||||||  || ||||||||||||||||    
T  43929227 caaatcccaaatttgataggaaacttaacctacgattattctacaacctaaacatcaagtcttaacacaattagcatggtttctacacttttc 43929319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 3803524 - 3803586
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagt 66  Q
    ||||||||||||||||| |||||||| | ||||||||||||||||| ||||||||||||||||    
T  3803524 tgtgaaaaagacgcaagcacgcgaaataagggatgctgtcaaagtgtagctcgcgaggcgagt 3803586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 196
Target Start/End: Complemental strand, 48043754 - 48043651
Alignment:
Q  92 gacagacagctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattatt 191  Q
    |||||||||||||||||||| |  | ||||| || ||||||||||||||||||| |||| |||| ||||||||  | |||||||| |||||||| |||||    
T  48043754 gacagacagctctacgggaagaact-agttttcatccaaaaacccaatttttcaaccacccaaatcccaaattcaataggaaactcaacctatgtttatt 48043656  T
Q  192 ctaca 196  Q
    |||||    
T  48043655 ctaca 48043651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 18739585 - 18739648
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaa 68  Q
    |||||||||||||||||||||||||||||| |||||||||  |||||||||||  |||||||||    
T  18739585 gtgaaaaagacgcaagaacgcgaaacagggaatgctgtcactgtgcagctcgcctggcgagtaa 18739648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 10833705 - 10833662
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtca 44  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  10833705 acgtgtgaaaaagacgcaagaacgcgaaacagggtatgctgtca 10833662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 29907418 - 29907512
Alignment:
Q  99 agctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattct 193  Q
    ||||||||||||| |   |||||| |||||||||||||||||||||| |||| ||||  |||||||||| |||||| |  ||||||| |||||||    
T  29907418 agctctacgggaagaaaccagttttcagccaaaaacccaatttttcaaccacccaaattccaaatttgataggaaattctacctatgtttattct 29907512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 29948584 - 29948678
Alignment:
Q  99 agctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattct 193  Q
    ||||||||||||| |   |||||| |||||||||||||||||||||| |||| ||||  |||||||||| |||||| |  ||||||| |||||||    
T  29948584 agctctacgggaagaaaccagttttcagccaaaaacccaatttttcaaccacccaaattccaaatttgataggaaattctacctatgtttattct 29948678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 29997738 - 29997832
Alignment:
Q  99 agctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattct 193  Q
    ||||||||||||| |   |||||| |||||||||||||||||||||| |||| ||||  |||||||||| |||||| |  ||||||| |||||||    
T  29997738 agctctacgggaagaaaccagttttcagccaaaaacccaatttttcaaccacccaaattccaaatttgataggaaattctacctatgtttattct 29997832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 25058423 - 25058458
Alignment:
Q  6 tgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    ||||||||||||||||||||||||||||||||||||    
T  25058423 tgaaaaagacgcaagaacgcgaaacaggggatgctg 25058458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 17938218 - 17938268
Alignment:
Q  7 gaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgc 57  Q
    |||||||| ||||||||| |||||||||||||||||||  |||||||||||    
T  17938218 gaaaaagatgcaagaacgagaaacaggggatgctgtcactgtgcagctcgc 17938268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 29544375 - 29544313
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagt 66  Q
    ||||||||||| |||||||||||||||||| ||||| |||   ||| ||||||||||||||||    
T  29544375 tgtgaaaaagatgcaagaacgcgaaacaggtgatgccgtctctgtgaagctcgcgaggcgagt 29544313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 215
Target Start/End: Complemental strand, 45803611 - 45803491
Alignment:
Q  94 cagacagctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattct 193  Q
    ||||||| |||||||||| |   | |||| ||||||||||||||| |||||| |||| | || ||||||||  | |||||||| |||||||| |||||||    
T  45803611 cagacagttctacgggaagaaacctgttttcagccaaaaacccaa-ttttcaaccaccctaatcccaaattcaataggaaactcaacctatgtttattct 45803513  T
Q  194 acagtctgaacatcgattctta 215  Q
    |||  ||| ||||| |||||||    
T  45803512 acaacctggacatcaattctta 45803491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 1468599 - 1468563
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    ||||||||||||||||||||||||||||| |||||||    
T  1468599 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 1468563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 3527400 - 3527329
Alignment:
Q  124 cagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctaca 196  Q
    ||||||||||||||| |||||| |||| |||| ||||||||  | |||||||| |||||||| ||||||||||    
T  3527400 cagccaaaaacccaa-ttttcaaccacccaaatcccaaattcaataggaaactcaacctatgtttattctaca 3527329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 12808629 - 12808665
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    ||||||||||||||||||| |||||||||||||||||    
T  12808629 gtgaaaaagacgcaagaacacgaaacaggggatgctg 12808665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 290
Target Start/End: Original strand, 15233101 - 15233166
Alignment:
Q  223 tgccacggtttctacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaattt 290  Q
    ||||| || ||||||||| || ||| ||| ||||||||||  ||||||||||||||||||||||||||    
T  15233101 tgccatggattctacactctttaattcaaaaatcatactc--aaaacctaacccccaattcccaattt 15233166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 11325199 - 11325115
Alignment:
Q  214 taacacaattgccacggtttctacacttttcaatacaagaa-tcatactccaaaaacctaacccccaattcccaatttcaactagaa 299  Q
    |||||| ||||||| |||||||||||| |||||| ||| || ||||| ||  ||||||||||||||| || |||| |||||||||||    
T  11325199 taacactattgccatggtttctacactcttcaattcaaaaaatcatagtc--aaaacctaacccccattttccaaattcaactagaa 11325115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 17670075 - 17670032
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtca 44  Q
    |||||||||||||||||||||||  ||||||||| |||||||||    
T  17670075 acgtgtgaaaaagacgcaagaacatgaaacagggcatgctgtca 17670032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15978158 - 15978212
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||||||||||||  |||||||  ||||||||||  |||||||||    
T  15978158 acgtgtgaaaaagacgcaagaacatgaaacagaagatgctgtcactgtgcagctc 15978212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 33564815 - 33564869
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||||||||||||  |||||| | ||||||||||  |||||||||    
T  33564815 acgtgtgaaaaagacgcaagaacatgaaacaagagatgctgtcactgtgcagctc 33564869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 35961253 - 35961199
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||| ||||||||  |||||||| ||||||||||  |||||||||    
T  35961253 acgtgtgaaaaagatgcaagaacatgaaacaggagatgctgtcattgtgcagctc 35961199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 53646426 - 53646372
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||||||||||||  |||||| | ||||||||||  |||||||||    
T  53646426 acgtgtgaaaaagacgcaagaacatgaaacatgagatgctgtcactgtgcagctc 53646372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 3161287 - 3161254
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggg 34  Q
    |||||||||| |||||||||||||||||||||||    
T  3161287 acgtgtgaaatagacgcaagaacgcgaaacaggg 3161254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20248350 - 20248305
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaa 46  Q
    ||||||||||||||| ||||||||||||| | || |||||||||||    
T  20248350 acgtgtgaaaaagacacaagaacgcgaaataaggaatgctgtcaaa 20248305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 194
Target Start/End: Original strand, 25201936 - 25202013
Alignment:
Q  117 cagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattcta 194  Q
    |||||| |||||||||||| || |||||| |||  |||| ||||||||  | |||||||| |||||||| ||||||||    
T  25201936 cagttttcagccaaaaaccaaaattttcaaccatccaaatcccaaattcaataggaaactcaacctatgtttattcta 25202013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 48044113 - 48044080
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggg 34  Q
    |||||||||| |||||||||||||||||||||||    
T  48044113 acgtgtgaaacagacgcaagaacgcgaaacaggg 48044080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 6805139 - 6805091
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaaca 205  Q
    ||||||||||| || ||||||||| |||||||||||||||  |||||||    
T  6805139 cccaaatttgatagaaaacttaacatatgattattctacaacctgaaca 6805091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 8269348 - 8269312
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    |||||||||| |||||||| |||||||||||||||||    
T  8269348 gtgaaaaagatgcaagaacacgaaacaggggatgctg 8269312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 8276459 - 8276423
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    |||||||||| |||||||| |||||||||||||||||    
T  8276459 gtgaaaaagatgcaagaacacgaaacaggggatgctg 8276423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 24546526 - 24546582
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgc 57  Q
    |||||||||||||||||||||||  ||||||| ||||| ||||| || ||| |||||    
T  24546526 acgtgtgaaaaagacgcaagaacatgaaacagtggatgttgtcagagagcaactcgc 24546582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 25104562 - 25104514
Alignment:
Q  9 aaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgc 57  Q
    |||||||||||||||| ||||||||||||| |||||   ||||||||||    
T  25104562 aaaagacgcaagaacgtgaaacaggggatgttgtcactatgcagctcgc 25104514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 45804014 - 45803950
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgag 65  Q
    ||||| |||| |||||||||||  |||| ||||||||| |||||  ||||||||||| |||||||    
T  45804014 acgtgcgaaacagacgcaagaatacgaatcaggggatgttgtcactgtgcagctcgcaaggcgag 45803950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 227; Significance: 1e-125; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 323
Target Start/End: Complemental strand, 49547310 - 49546989
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    ||||||||||||||||||||||||||||| || ||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||  |||     
T  49547310 acgtgtgaaaaagacgcaagaacgcgaaatagaggatgatgtcaaagtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaa 49547211  T
Q  101 ctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtct 200  Q
    |||||||||||||   |||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||| |||||||||| |||    
T  49547210 ctctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatct 49547111  T
Q  201 gaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaag 300  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||     
T  49547110 gaacatcgattcttaacacaattgccatggtttctacacttttcaatccaag-atcgtactccaaaaacctaacccccaattcccaatttcaactagaac 49547012  T
Q  301 tatgctaaaccaaaatcagaatt 323  Q
    ||||||||||||| |||||||||    
T  49547011 tatgctaaaccaagatcagaatt 49546989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 4 - 323
Target Start/End: Original strand, 36038499 - 36038818
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctc 103  Q
    |||||||||||||||||||||||||||||| |||||||||   ||||| |||||||||||||||||||||| |||| ||||||||||||||  ||| | |    
T  36038499 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgcatctcgcgaggcgagtaagtttactcgctatggcgagttgcgacgaacaaccc 36038598  T
Q  104 tacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaa 203  Q
    ||||||||||   |||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||| |||||||||| ||||||    
T  36038599 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 36038698  T
Q  204 catcgattcttaacacaattgccacggtttctacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaagtat 303  Q
    ||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  36038699 catcgattcttaacacaattgccatcgtttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactat 36038798  T
Q  304 gctaaaccaaaatcagaatt 323  Q
    ||||||||||||||||||||    
T  36038799 gctaaaccaaaatcagaatt 36038818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 4 - 323
Target Start/End: Original strand, 15534810 - 15535129
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctc 103  Q
    ||||||||||||| |||||||||||||||| |||||||||   |||||||||||||||||||||||||||| |||||||||||||||||||  ||| | |    
T  15534810 tgtgaaaaagacggaagaacgcgaaacaggtgatgctgtctctgtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 15534909  T
Q  104 tacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaa 203  Q
    ||||||||||   |||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||| |||| |||||||||| ||||||    
T  15534910 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctacaatctgaa 15535009  T
Q  204 catcgattcttaacacaattgccacggtttctacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaagtat 303  Q
    ||||||||||||||||||||| || | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  15535010 catcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactat 15535109  T
Q  304 gctaaaccaaaatcagaatt 323  Q
    |||||| |||||||||||||    
T  15535110 gctaaatcaaaatcagaatt 15535129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 33849428 - 33849716
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    ||||||||||||||||||||||| ||||||||| |||||| |||  |||||||||||||||||||||||||||| |||||||||||||||||||  ||||    
T  33849428 acgtgtgaaaaagacgcaagaacacgaaacaggtgatgctatcactgtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacag 33849527  T
Q  101 ctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtct 200  Q
    |||||||||||||   |||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||| ||||||||||   |    
T  33849528 ctctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaacat 33849627  T
Q  201 gaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatt 289  Q
    |||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  33849628 gaacatcgattcttaacacaattgtcatggtttctacacttttcaattcaagaatcatactcccaaaacctaacccccaattcccaatt 33849716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 28385929 - 28386185
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  28385929 acgtgtgaaaaagacgcaagaacgcgaaatagaggatgctgtcaaagtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacagacaa 28386028  T
Q  101 ctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtct 200  Q
    |||||||| || |   |||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||  ||    
T  28386029 ctctacggaaatagaccagtttccagccaaaaacccaaattttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacct 28386128  T
Q  201 gaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    ||||||| ||||||||||||||| | | ||||||||||||||||||| ||| |||||    
T  28386129 gaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 28386185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 9638693 - 9638881
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    ||||||||||||||||||||||||||||| |||| ||| |||||  ||||||||||||||||||||||| |||| ||||||||||||||||||||||||     
T  9638693 acgtgtgaaaaagacgcaagaacgcgaaatagggtatgatgtcactgtgcagctcgcgaggcgagtaagcttactcgctgtggcgagttgcgacagacaa 9638792  T
Q  101 ctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgatta 189  Q
    | |||||||||||   || ||| ||| ||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  9638793 cactacgggaacagaccaattttcagtcaaaaactcaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgatta 9638881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 140 - 289
Target Start/End: Complemental strand, 16277515 - 16277366
Alignment:
Q  140 ttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacac 239  Q
    |||||||| || |||||||||||||||| |||||||||||||||||||||||||||   ||||||||| ||||||||||||||||||| |||||||||||    
T  16277515 ttttcatctacccaaaccccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaattcttaacacaattgccatggtttctacac 16277416  T
Q  240 ttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatt 289  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  16277415 ttttcaatccaagaatcatactcccaaaacctaacccccaattcccaatt 16277366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 140 - 289
Target Start/End: Complemental strand, 53387125 - 53386976
Alignment:
Q  140 ttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacac 239  Q
    |||||||| || |||||||||||||||| |||||||||||||||||||||||||||   ||||||||| ||||||||||||||||||| |||||||||||    
T  53387125 ttttcatctacccaaaccccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaattcttaacacaattgccatggtttctacac 53387026  T
Q  240 ttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatt 289  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  53387025 ttttcaatccaagaatcatactcccaaaacctaacccccaattcccaatt 53386976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 15008652 - 15008855
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||| || ||||     
T  15008652 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagatcgcgaggtgagtaagtttactcgctgtggcgagttgccacggacaa 15008751  T
Q  101 ctctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtc 199  Q
     ||||||||||||   |||||| ||  |||||| ||| |  ||||||| || |||| ||||||||| | |||||||| |||||||| ||||||||||| |    
T  15008752 atctacgggaacagaccagttttcactccaaaagcccca-atttcatcaacccaaatcccaaattttataggaaactcaacctatgtttattctacagcc 15008850  T
Q  200 tgaac 204  Q
    |||||    
T  15008851 tgaac 15008855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 40620216 - 40620430
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||| ||||     
T  40620216 acgtgtgaaaaagatgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttactcgttgtggcgaggtgcgacggacaa 40620315  T
Q  101 ctctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtc 199  Q
     ||||||||||||   |||||| ||  |||||| ||| |  ||||||| || |||| ||||||||||| |||||||| |||||||| |||| |||| | |    
T  40620316 atctacgggaacagaccagttttcactccaaaagcccca-atttcatcaacccaaatcccaaatttgagaggaaactcaacctatgtttatcctacggcc 40620414  T
Q  200 tgaacatcgattctta 215  Q
    ||||| || |||||||    
T  40620415 tgaacttcaattctta 40620430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 3 - 215
Target Start/End: Complemental strand, 10694611 - 10694399
Alignment:
Q  3 gtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagct 102  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||| ||||| ||||  |    
T  10694611 gtgtcaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgaagctcgcgaggcgagtacgtttactcgctgtggcgagtggcgacggacaaat 10694512  T
Q  103 ctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctg 201  Q
    ||||| |||||   || ||| ||  |||||| ||| |  ||||||| || |||| ||||||||||| |||||||| |||||||| ||||||||||| |||    
T  10694511 ctacgagaacagaccaattttcactccaaaagcccca-atttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctg 10694413  T
Q  202 aacatcgattctta 215  Q
    ||| || |||||||    
T  10694412 aacttcaattctta 10694399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 3 - 215
Target Start/End: Complemental strand, 10908377 - 10908165
Alignment:
Q  3 gtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagct 102  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||| ||||| ||||  |    
T  10908377 gtgtcaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgaagctcgcgaggcgagtacgtttactcgctgtggcgagtggcgacggacaaat 10908278  T
Q  103 ctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctg 201  Q
    ||||| |||||   || ||| ||  |||||| ||| |  ||||||| || ||||   ||||||||| |||||||| |||||||| ||||||||||| |||    
T  10908277 ctacgagaacagaccaattttcactccaaaagcccca-atttcatcaacccaaataacaaatttgataggaaactcaacctatgtttattctacagcctg 10908179  T
Q  202 aacatcgattctta 215  Q
    ||| || |||||||    
T  10908178 aacttcaattctta 10908165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 140 - 257
Target Start/End: Original strand, 18230565 - 18230682
Alignment:
Q  140 ttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacac 239  Q
    |||||||| || |||| ||||||||||| |||||||||| ||||||||||| |||||  ||||||||| ||||||||||||||| | | | |||||||||    
T  18230565 ttttcatcaacacaaatcccaaatttgataggaaacttatcctatgattatcctacaacctgaacatcaattcttaacacaatttcgatgatttctacac 18230664  T
Q  240 ttttcaatacaagaatca 257  Q
    |||||||| ||| |||||    
T  18230665 ttttcaattcaaaaatca 18230682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 23802613 - 23802528
Alignment:
Q  159 caaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||  ||||||||||||||||||||||||||||  ||||||||| ||||||||||||||| ||| ||||||||||||||||    
T  23802613 caaatttgttaggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 23802528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 15344776 - 15344863
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||||  ||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| || | ||||||||||||||    
T  15344776 cccaaatttgttaggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattgtcatgatttctacacttttc 15344863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 12611752 - 12611839
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||||  || |||||||||||||||||||||||||  ||||||||| |||||||||||||||  || ||||||||||||||||    
T  12611752 cccaaatttgttagaaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattatcatggtttctacacttttc 12611839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 15447586 - 15447501
Alignment:
Q  159 caaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||  || |||||||||||||||||||||||||  ||||||||| |||||||||||||||| || ||||||| ||||||||    
T  15447586 caaatttgttagcaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattgtcatggtttctgcacttttc 15447501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 223 - 323
Target Start/End: Original strand, 32490653 - 32490751
Alignment:
Q  223 tgccacggtttctacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaagtatgctaaaccaaaatcagaat 322  Q
    ||||| || ||||||||| || ||| ||| ||||||||||  |||||||||||||||||||||||||||||||||||   ||||||| ||||||||||||    
T  32490653 tgccatggattctacactctttaattcaaaaatcatactc--aaaacctaacccccaattcccaatttcaactagaaccttgctaaatcaaaatcagaat 32490750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 51463239 - 51463152
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||||  || |||||| ||||||||||||||||||  ||||||||| |||||||||||||||  || ||||||||||||||||    
T  51463239 cccaaatttgttagaaaactttacctatgattattctacaacctgaacatcaattcttaacacaattatcatggtttctacacttttc 51463152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 15416031 - 15415948
Alignment:
Q  214 taacacaattgccacggtttctacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaa 299  Q
    |||||| ||||||| || |||||||||||||||| ||| ||||||| ||  |||||||||||||||| |||||| |||||||||||    
T  15416031 taacactattgccatggattctacacttttcaattcaaaaatcataatc--aaaacctaacccccaaatcccaaattcaactagaa 15415948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 16370872 - 16370789
Alignment:
Q  214 taacacaattgccacggtttctacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaa 299  Q
    |||||| |||||||  ||||||||||| |||||| ||| ||||||| ||  |||||||||||||||||| |||| |||||||||||    
T  16370872 taacaccattgccatagtttctacactcttcaattcaaaaatcataatc--aaaacctaacccccaatttccaaattcaactagaa 16370789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 14549474 - 14549538
Alignment:
Q  141 tttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaaca 205  Q
    ||||||| || |||| ||||||||||| |||||||||||| |||||||||||||||  |||||||    
T  14549474 tttcatctacccaaatcccaaatttgataggaaacttaacatatgattattctacaacctgaaca 14549538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 14995768 - 14995804
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    |||||||||||||||||||||||||||||||||||||    
T  14995768 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 14995804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 19434871 - 19434823
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaaca 205  Q
    ||||||||||| ||||||||||||||||||||||||||||  |||||||    
T  19434871 cccaaatttgataggaaacttaacctatgattattctacaacctgaaca 19434823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 35660712 - 35660776
Alignment:
Q  141 tttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaaca 205  Q
    ||||||| || |||| ||||||||||| |||||||||||| |||||||||||||||  |||||||    
T  35660712 tttcatctacccaaatcccaaatttgataggaaacttaacatatgattattctacaacctgaaca 35660776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 13043980 - 13043893
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||||| | | ||| | ||||||  ||||||||||  ||||||||| ||||||||||||||| | | ||||||||||||||||    
T  13043980 cccaaatttgataaggaacatcacctattgttattctacaacctgaacatcaattcttaacacaattactatggtttctacacttttc 13043893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 16296681 - 16296759
Alignment:
Q  127 ccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaaca 205  Q
    ||||||| ||||  ||| ||| || |||| ||||||||||| |||||||||||||||||||||||| |||  |||||||    
T  16296681 ccaaaaaaccaaaatttaatctacccaaatcccaaatttgataggaaacttaacctatgattattcaacaacctgaaca 16296759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 44023970 - 44023916
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||||||||||||  |||||||| ||||||||||  |||||||||    
T  44023970 acgtgtgaaaaagacgcaagaacatgaaacaggagatgctgtcactgtgcagctc 44023916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 45005828 - 45005886
Alignment:
Q  199 ctgaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    ||||||||| ||||||||||||||| | | ||||||||||||||||||| ||| |||||    
T  45005828 ctgaacatcaattcttaacacaatttcaatggtttctacacttttcaattcaaaaatca 45005886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 30147541 - 30147574
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggg 34  Q
    ||||||||||||||||||||||||||||||||||    
T  30147541 acgtgtgaaaaagacgcaagaacgcgaaacaggg 30147574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 15287844 - 15287792
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgc 57  Q
    |||||||||| |||||||||||||||||||| ||||||||  |||||| ||||    
T  15287844 gtgaaaaagatgcaagaacgcgaaacagggggtgctgtcactgtgcagatcgc 15287792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 19697958 - 19697922
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    ||||||||||||||||||| |||||||||||||||||    
T  19697958 gtgaaaaagacgcaagaacacgaaacaggggatgctg 19697922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 19708543 - 19708507
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    ||||||||||||||||||| |||||||||||||||||    
T  19708543 gtgaaaaagacgcaagaacacgaaacaggggatgctg 19708507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7640723 - 7640668
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcg 56  Q
    |||||||||||||||||||||||  ||||||||  |||||||||||| ||| ||||    
T  7640723 acgtgtgaaaaagacgcaagaacatgaaacaggacatgctgtcaaagagcaactcg 7640668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 40
Target Start/End: Original strand, 10643870 - 10643905
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgct 40  Q
    |||||||||| |||||||||||||||||||||||||    
T  10643870 gtgaaaaagatgcaagaacgcgaaacaggggatgct 10643905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 18247863 - 18247902
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctgtca 44  Q
    |||||||||||||||||||||||||||||| | |||||||    
T  18247863 gtgaaaaagacgcaagaacgcgaaacagggaaagctgtca 18247902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9923882 - 9923936
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||||||||||||  |||||||| ||||||| ||  |||||||||    
T  9923882 acgtgtgaaaaagacgcaagaacatgaaacaggagatgctgccattgtgcagctc 9923936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 46740884 - 46740938
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||||||||||||  |||||||| |||| |||||  |||||||||    
T  46740884 acgtgtgaaaaagacgcaagaacatgaaacaggagatgttgtcattgtgcagctc 46740938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 50221876 - 50221822
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||||||||||||  |||||||  ||||||||||  |||||||||    
T  50221876 acgtgtgaaaaagacgcaagaacatgaaacagaagatgctgtcactgtgcagctc 50221822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 10237861 - 10237808
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgc 57  Q
    ||||||||||||||||||  ||||||||||| ||| |||||  |||||||||||    
T  10237861 tgtgaaaaagacgcaagattgcgaaacagggaatgatgtcactgtgcagctcgc 10237808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 13164781 - 13164814
Alignment:
Q  3 gtgtgaaaaagacgcaagaacgcgaaacagggga 36  Q
    ||||||||||||||||||||||| ||||||||||    
T  13164781 gtgtgaaaaagacgcaagaacgcaaaacagggga 13164814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 14477025 - 14477058
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggg 34  Q
    |||||||||| |||||||||||||||||||||||    
T  14477025 acgtgtgaaacagacgcaagaacgcgaaacaggg 14477058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 15318871 - 15318928
Alignment:
Q  267 aacctaacccccaa-ttcccaatttcaactagaagtatgctaaaccaaaatcagaatt 323  Q
    |||||||||| ||| ||||||||||||||||||| | || |||| |||||||||||||    
T  15318871 aacctaacccgcaaattcccaatttcaactagaactttgttaaatcaaaatcagaatt 15318928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 12623000 - 12623052
Alignment:
Q  3 gtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    ||||||||||||||||||||   |||||||| ||||||||||  |||||||||    
T  12623000 gtgtgaaaaagacgcaagaatatgaaacaggagatgctgtcactgtgcagctc 12623052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 15294954 - 15294902
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgc 57  Q
    |||||||||| ||||||||||||||||| || ||||||||   ||||||||||    
T  15294954 gtgaaaaagatgcaagaacgcgaaacagagggtgctgtcactatgcagctcgc 15294902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 19020133 - 19020185
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgc 57  Q
    |||||||||| ||||||| |||||||||||| ||||||||  ||||| |||||    
T  19020133 gtgaaaaagatgcaagaatgcgaaacagggggtgctgtcactgtgcaactcgc 19020185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 4 - 323
Target Start/End: Original strand, 11303876 - 11304195
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctc 103  Q
    |||||||||||||||||||||||||||||| |||||||||   ||| ||||||||||||||||| |||||| |||||||||||||||||||  ||| | |    
T  11303876 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgtagctcgcgaggcgagtatgtttactcgctgtggcgagttgcgacgaacaaccc 11303975  T
Q  104 tacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaa 203  Q
    ||||||||||   |||||| ||||||||||||||||||||||||||| ||||| |||||||||| |||||||| |||||||| |||||||||| ||||||    
T  11303976 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaacaccaaatttgataggaaactcaacctatgtttattctacaatctgaa 11304075  T
Q  204 catcgattcttaacacaattgccacggtttctacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaagtat 303  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  11304076 catcgattcttaacacaattgccatggtttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactat 11304175  T
Q  304 gctaaaccaaaatcagaatt 323  Q
    ||||||||||||||||||||    
T  11304176 gctaaaccaaaatcagaatt 11304195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 4 - 323
Target Start/End: Complemental strand, 23664486 - 23664167
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctc 103  Q
    |||||||||||||||||||||||||||||| |||||||||   ||| ||||||||||||||||| |||||| |||||||||||||||||||  ||| | |    
T  23664486 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgtagctcgcgaggcgagtacgtttactcgctgtggcgagttgcgacgaacaaccc 23664387  T
Q  104 tacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaa 203  Q
    ||||||||||   |||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||| |||||||||| ||||||    
T  23664386 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 23664287  T
Q  204 catcgattcttaacacaattgccacggtttctacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaagtat 303  Q
    ||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  23664286 catcgattcttaacacaattgtcatggtttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactat 23664187  T
Q  304 gctaaaccaaaatcagaatt 323  Q
    ||||||||||||||||||||    
T  23664186 gctaaaccaaaatcagaatt 23664167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 4 - 323
Target Start/End: Original strand, 29797239 - 29797559
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctc 103  Q
    |||||||||||||||||||||||||||||| |||||||||   ||| |||||||||||||||||||||||| |||||||||||||||||||  ||| | |    
T  29797239 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgtagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 29797338  T
Q  104 tacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaa 203  Q
    ||||||||||   |||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||| |||| |||||||||| ||||||    
T  29797339 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctacaatctgaa 29797438  T
Q  204 catcgattcttaacacaattgccacggtttctacacttttcaatacaagaatcatactcc-aaaaacctaacccccaattcccaatttcaactagaagta 302  Q
    ||||||||| ||||||||||| || | ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||    
T  29797439 catcgattcctaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaaacctaacccccaattcccaatttcagctagaacta 29797538  T
Q  303 tgctaaaccaaaatcagaatt 323  Q
    ||||||| |||||||||||||    
T  29797539 tgctaaatcaaaatcagaatt 29797559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 4 - 323
Target Start/End: Original strand, 29801058 - 29801378
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctc 103  Q
    |||||||||||||||||||||||||||||| |||||||||   ||| |||||||||||||||||||||||| |||||||||||||||||||  ||| | |    
T  29801058 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgtagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 29801157  T
Q  104 tacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaa 203  Q
    ||||||||||   |||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||| |||| |||||||||| ||||||    
T  29801158 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctacaatctgaa 29801257  T
Q  204 catcgattcttaacacaattgccacggtttctacacttttcaatacaagaatcatactcc-aaaaacctaacccccaattcccaatttcaactagaagta 302  Q
    ||||||||| ||||||||||| || | ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||    
T  29801258 catcgattcctaacacaattgtcatgatttctacacttttcaatccaagaatcatactccaaaaaacctaacccccaattcccaatttcagctagaacta 29801357  T
Q  303 tgctaaaccaaaatcagaatt 323  Q
    ||||||| |||||||||||||    
T  29801358 tgctaaatcaaaatcagaatt 29801378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 4 - 257
Target Start/End: Complemental strand, 16108222 - 16107969
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctc 103  Q
    |||||||||||||||||||||||||| ||| |||||||||   |||||||||||||||||||||||||||| |||||||||||||||||||  ||| |||    
T  16108222 tgtgaaaaagacgcaagaacgcgaaataggtgatgctgtcgctgtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaactc 16108123  T
Q  104 tacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaa 203  Q
    ||||||||||   |||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||| |||||||||| ||||||    
T  16108122 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 16108023  T
Q  204 catcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    |||||||||||||||||||| | | ||||||||||||||||||| ||| |||||    
T  16108022 catcgattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 16107969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 11661791 - 11662047
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||||||||||||||||||||||||| ||||||| |||||||||  | |||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  11661791 acgtgtgaaaaagacgcaagaacgcggaacagggtatgctgtcactgggcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacagacaa 11661890  T
Q  101 ctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtct 200  Q
    |||||||||||||   ||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| ||||||  ||    
T  11661891 ctctacgggaacagaccagtttctagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctataattagtctacaacct 11661990  T
Q  201 gaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    ||||||| ||||||||||||||| | | ||||| ||||||||||||| ||| |||||    
T  11661991 gaacatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatca 11662047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 14188660 - 14188404
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    ||||||||||||||||||| |||||||||||||| |||||||||  | ||||||||| |||||||||||||||  |||||||||||||||||||||  |     
T  14188660 acgtgtgaaaaagacgcaaaaacgcgaaacagggtatgctgtcactgggcagctcgcaaggcgagtaagtttaatcgctgtggcgagttgcgacaggaaa 14188561  T
Q  101 ctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtct 200  Q
    |||||||||||||   |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||   |    
T  14188560 ctctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaactt 14188461  T
Q  201 gaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    ||||||| ||||||||||||||| | | ||||||||||| ||||||| ||| |||||    
T  14188460 gaacatcaattcttaacacaatttcgatggtttctacacatttcaattcaaaaatca 14188404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 141 - 323
Target Start/End: Complemental strand, 14105654 - 14105472
Alignment:
Q  141 tttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacact 240  Q
    ||||||| || |||||||||||||||| ||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||| |||||| |||||    
T  14105654 tttcatcaacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattgccatggtttccacact 14105555  T
Q  241 tttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaagtatgctaaaccaaaatcagaatt 323  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||| ||| |||||||||||| ||||||    
T  14105554 tttcaatccaagaatcatactcccaaaacctaacccccaattcccaatttcagctagaactattctaaaccaaaattagaatt 14105472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 141 - 323
Target Start/End: Complemental strand, 14415671 - 14415489
Alignment:
Q  141 tttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacact 240  Q
    ||||||| || |||||||||||||||| ||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||| |||||| |||||    
T  14415671 tttcatcaacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattgccatggtttccacact 14415572  T
Q  241 tttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaagtatgctaaaccaaaatcagaatt 323  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||| ||| |||||||||||| ||||||    
T  14415571 tttcaatccaagaatcatactcccaaaacctaacccccaattcccaatttcagctagaactattctaaaccaaaattagaatt 14415489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 1856766 - 1856511
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||     
T  1856766 acgtgtgaaaaagacgcaagaacgcgaaacagggaatgctgtcaaagtg-agctcgcgaggcgagtaagtgtactcgctgtggcgagttgcgacagacaa 1856668  T
Q  101 ctctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtc 199  Q
     ||||||||||||  |||||||  |  |||||| ||| |  ||||||| || |||| ||||||||||| |||||||| |||||||| ||||||||||| |    
T  1856667 atctacgggaacagatcagtttttactccaaaagcccca-atttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcc 1856569  T
Q  200 tgaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    ||||| || ||||||||||||||| | | ||||||||||||||||||| ||| |||||    
T  1856568 tgaacttcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 1856511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 8 - 189
Target Start/End: Complemental strand, 17070651 - 17070470
Alignment:
Q  8 aaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctctacg 107  Q
    ||||||||||||||||||||||||||| ||| |||||  |||||||||||| | ||||||||||||| ||| |||||||||||||||||||| |||||||    
T  17070651 aaaaagacgcaagaacgcgaaacagggtatgttgtcactgtgcagctcgcgcgacgagtaagtttactcgcagtggcgagttgcgacagacaactctacg 17070552  T
Q  108 ggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgatta 189  Q
    ||| ||    ||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  17070551 ggagcagactagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgatta 17070470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 25926666 - 25926410
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||| ||||     
T  25926666 acgtgtgaaaaagacgcaagaacgcgaaatagggaatgctgtcaaagtgcagatcgcgaggcgagtaagtgtactcgctgtggcgagttgcgacggacaa 25926567  T
Q  101 ctctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtc 199  Q
     ||||||||||||   |||||| ||  |||||  ||| |  ||||||| || |||| ||||||||| | |||||||| |||||||| ||||||||||| |    
T  25926566 atctacgggaacagaccagttttcactccaaatgcccca-atttcatcaacccaaatcccaaattttataggaaactgaacctatgtttattctacagcc 25926468  T
Q  200 tgaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    ||||| || ||||||||||||||| | | ||||||||||||||||||| ||| |||||    
T  25926467 tgaacttcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 25926410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 13917939 - 13917683
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||||||||||||| |||||| |||||||||||| |||||||||||||| |||||||||||||||| ||| ||| ||||||||||||||||||| ||||     
T  13917939 acgtgtgaaaaagaagcaagaccgcgaaacagggaatgctgtcaaagtgaagctcgcgaggcgagtgagtgtactcgctgtggcgagttgcgacggacaa 13917840  T
Q  101 ctctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtc 199  Q
     ||||||||||||   |||||| ||  |||||| ||| |  ||||||| || || | ||||||||||| |||||||| |||||||| ||||||||||| |    
T  13917839 atctacgggaacagaccagttttcactccaaaagcccca-atttcatcaacccagatcccaaatttgataggaaactcaacctatgtttattctacagcc 13917741  T
Q  200 tgaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    ||||| || ||||||||||||||| | | ||||||||||||||||||| ||| |||||    
T  13917740 tgaacttcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 13917683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 140 - 289
Target Start/End: Complemental strand, 17505192 - 17505043
Alignment:
Q  140 ttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacac 239  Q
    |||||||| || ||||| |||||||||| |||||||||||||||||||||||||||   ||||||||| ||||||||||||||||||| |||||||||||    
T  17505192 ttttcatctacccaaactccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaattcttaacacaattgccatggtttctacac 17505093  T
Q  240 ttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatt 289  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  17505092 ttttcaatccaagaatcatactcccaaaacctaacccccaattcccaatt 17505043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 140 - 289
Target Start/End: Original strand, 17548022 - 17548171
Alignment:
Q  140 ttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacac 239  Q
    |||||||| || ||||| |||||||||| |||||||||||||||||||||||||||   ||||||||| ||||||||||||||||||| |||||||||||    
T  17548022 ttttcatctacccaaactccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaattcttaacacaattgccatggtttctacac 17548121  T
Q  240 ttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatt 289  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  17548122 ttttcaatccaagaatcatactcccaaaacctaacccccaattcccaatt 17548171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 16550370 - 16550156
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||  | ||     
T  16550370 acgtgtgaaaaagacgcaagaacgtgaaacaggggatgctgtcaaagtgcagatcgcgaggcgagtaagtttactcgctgtggcgagttgcgatgggcaa 16550271  T
Q  101 ctctacgggaacatgtcag-tttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtc 199  Q
     |||| ||||||||  ||| ||||   |||||| ||| |  ||||||| || |||| ||||||||||| || ||||| |||||||| ||||||||||| |    
T  16550270 atctatgggaacataccagttttctttccaaaagcccca-atttcatcaacccaaatcccaaatttgatagaaaactcaacctatgtttattctacagcc 16550172  T
Q  200 tgaacatcgattctta 215  Q
    ||||| || |||||||    
T  16550171 tgaacttcaattctta 16550156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 16615292 - 16615506
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||  | ||     
T  16615292 acgtgtgaaaaagacgcaagaacgtgaaacaggggatgctgtcaaagtgcagatcgcgaggcgagtaagtttactcgctgtggcgagttgcgatgggcaa 16615391  T
Q  101 ctctacgggaacatgtcag-tttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtc 199  Q
     |||| ||||||||  ||| ||||   |||||| ||| |  ||||||| || |||| ||||||||||| || ||||| |||||||| ||||||||||| |    
T  16615392 atctatgggaacataccagttttctttccaaaagcccca-atttcatcaacccaaatcccaaatttgatagaaaactcaacctatgtttattctacagcc 16615490  T
Q  200 tgaacatcgattctta 215  Q
    ||||| || |||||||    
T  16615491 tgaacttcaattctta 16615506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 32160565 - 32160354
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctc 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| || |  ||    
T  32160565 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcggggcgagtaagtttactcgctgtggcgagttgcgacggaaaaatc 32160466  T
Q  104 tacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctga 202  Q
    ||||  ||||   |||||| ||  |||||| ||| |  ||||||| |  |||| | ||||||||| |||||||| |||||||| ||||||||||| ||||    
T  32160465 tacgcaaacaaaccagttttcactccaaaagcccca-atttcatcaatccaaatctcaaatttgataggaaactcaacctatgtttattctacagcctga 32160367  T
Q  203 acatcgattctta 215  Q
    || || |||||||    
T  32160366 acttcaattctta 32160354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 4325921 - 4326020
Alignment:
Q  141 tttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacact 240  Q
    |||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| || ||||||||||||    
T  4325921 tttcatccacccaaatcccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattgtcatggtttctacact 4326020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 13864573 - 13864486
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||||  ||||||||||||||||||||||| |||| |||||||||| |||||||||||||||| || | ||||||||||||||    
T  13864573 cccaaatttgttaggaaacttaacctatgattattatacaatctgaacatcaattcttaacacaattgtcatgatttctacacttttc 13864486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 16462910 - 16462997
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||||| ||||||||||| ||||||||||||||||  ||||||||| |||||||||||||||||||  |||||||||| ||||    
T  16462910 cccaaatttgataggaaacttaatctatgattattctacaacctgaacatcaattcttaacacaattgccatcgtttctacacatttc 16462997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 13648123 - 13648223
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatc 256  Q
    ||||||||||| |||||| |||||||||||||||||||||  || |||||| |||||||||||||||   | ||||||||||||||||||| ||| ||||    
T  13648123 cccaaatttgataggaaatttaacctatgattattctacaacctaaacatcaattcttaacacaattttgatggtttctacacttttcaattcaaaaatc 13648222  T
Q  257 a 257  Q
    |    
T  13648223 a 13648223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 244
Target Start/End: Complemental strand, 39431403 - 39431311
Alignment:
Q  152 caaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    |||| |||| |||||| ||||||| |||| |||||||||||||||  ||||||||| |||||||||||||||| || ||||||||||||||||    
T  39431403 caaatcccatatttgataggaaacataacatatgattattctacaacctgaacatcaattcttaacacaattgacatggtttctacacttttc 39431311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 140 - 247
Target Start/End: Original strand, 13256517 - 13256624
Alignment:
Q  140 ttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacac 239  Q
    |||||||| || |||| ||||||||||| |||||||||| ||||||||||| |||||   |||||||| ||||||||||||||| | | | |||||||||    
T  13256517 ttttcatcaacccaaatcccaaatttgataggaaacttatcctatgattatcctacaacttgaacatcaattcttaacacaatttcgatgatttctacac 13256616  T
Q  240 ttttcaat 247  Q
    ||||||||    
T  13256617 ttttcaat 13256624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 141 - 244
Target Start/End: Complemental strand, 44190443 - 44190340
Alignment:
Q  141 tttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacact 240  Q
    ||||||| || |||| |||| |||||| ||||||||||||||||||||||||||||  ||||||||| ||||||||| |||||| || | ||||| ||||    
T  44190443 tttcatctacccaaatcccacatttgataggaaacttaacctatgattattctacaacctgaacatcaattcttaactcaattgtcatgttttcttcact 44190344  T
Q  241 tttc 244  Q
    ||||    
T  44190343 tttc 44190340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 223 - 323
Target Start/End: Complemental strand, 12201227 - 12201129
Alignment:
Q  223 tgccacggtttctacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaagtatgctaaaccaaaatcagaat 322  Q
    ||||| || ||||||||| || |||  || ||||||||||  |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||    
T  12201227 tgccatggattctacactctttaattgaaaaatcatactc--aaaacctaacccccaattcccaatttcaactagaatcttgctaaaccaaaatcagaat 12201130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 223 - 323
Target Start/End: Complemental strand, 12207832 - 12207734
Alignment:
Q  223 tgccacggtttctacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaagtatgctaaaccaaaatcagaat 322  Q
    ||||| || ||||||||| || ||| ||| || |||||||  |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||    
T  12207832 tgccatggattctacactctttaattcaaaaagcatactc--aaaacctaacccccaattcccaatttcaactagaaccttgctaaaccaaaatcagaat 12207735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 18455797 - 18455712
Alignment:
Q  159 caaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||  ||||||||||| |||| |||||||||||  ||||||||| ||||||||||||||| ||| ||||||||||||||||    
T  18455797 caaatttgttaggaaacttaagctataattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 18455712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 29052521 - 29052456
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagt 66  Q
    ||||||||||||||||||||||||| |||||||||||| ||| |||||||||| ||||||||||||    
T  29052521 acgtgtgaaaaagacgcaagaacgcaaaacaggggatgttgttaaagtgcagcccgcgaggcgagt 29052456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 19195016 - 19195078
Alignment:
Q  141 tttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaa 203  Q
    ||||||| || |||| ||||||||||| |||||||||||||||||||||||||||| ||||||    
T  19195016 tttcatctacccaaatcccaaatttgataggaaacttaacctatgattattctacaatctgaa 19195078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 12754893 - 12754829
Alignment:
Q  141 tttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaaca 205  Q
    ||||||| || |||| ||||||||||| ||||||||||||||||||||||||||||  |||||||    
T  12754893 tttcatctacccaaatcccaaatttgataggaaacttaacctatgattattctacaacctgaaca 12754829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 92 - 196
Target Start/End: Original strand, 18570421 - 18570524
Alignment:
Q  92 gacagacagctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattatt 191  Q
    |||||||||||||||||||| |   | |||| ||||||||||||||| |||||| |||| |||| ||||||||  | |||||| | |||||||| |||||    
T  18570421 gacagacagctctacgggaagaaacctgttttcagccaaaaacccaa-ttttcaaccacccaaatcccaaattcaagaggaaattcaacctatgtttatt 18570519  T
Q  192 ctaca 196  Q
    |||||    
T  18570520 ctaca 18570524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 196
Target Start/End: Complemental strand, 708733 - 708694
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctaca 196  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  708733 cccaaatttgataggaaacttaacctatgattattctaca 708694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 14274063 - 14274118
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattc 212  Q
    ||||||||||  ||||||||||||||||||||||||||||  ||||||||| ||||    
T  14274063 cccaaatttgttaggaaacttaacctatgattattctacaacctgaacatcaattc 14274118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 203
Target Start/End: Complemental strand, 8931083 - 8930933
Alignment:
Q  53 ctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactc 152  Q
    ||||||||||||  ||| | || ||| |||||||||  |||||||||| |||||||||| |     |||| ||||||||||| |||||||||| |||| |    
T  8931083 ctcgcgaggcgaacaagatcactcgccgtggcgagtgacgacagacagttctacgggaagaaacatgttttcagccaaaaactcaatttttcaaccaccc 8930984  T
Q  153 aaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaa 203  Q
    ||| | ||||||  | | |||||| |||||||| ||||| |||| ||||||    
T  8930983 aaatctcaaattcaaaaagaaactcaacctatgtttattatacaatctgaa 8930933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 25942312 - 25942362
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaacatc 207  Q
    ||||||||||| ||||||||||||||| ||||||||||||  |||||||||    
T  25942312 cccaaatttgataggaaacttaacctaagattattctacaacctgaacatc 25942362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 29052394 - 29052336
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattctta 215  Q
    ||||||||||| |||||||| |||||||| ||||||||||| |||||| || |||||||    
T  29052394 cccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattctta 29052336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 38295405 - 38295490
Alignment:
Q  119 gtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaaca 205  Q
    |||| ||||||||||||||||||| || |||| |||| ||||||||  | ||||||||  ||||||||||||||||||  |||||||    
T  38295405 gttttcagccaaaaacccaatttt-caaccacccaaatcccaaattcaataggaaactctacctatgattattctacatcctgaaca 38295490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 3192658 - 3192617
Alignment:
Q  3 gtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtca 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||    
T  3192658 gtgtgaaaaagacgcaagaacgcaaaacaggggatgttgtca 3192617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 23557404 - 23557461
Alignment:
Q  187 ttattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||||  ||||||||| |||| ||||||||||| || ||||||||||||||||    
T  23557404 ttattctacaacctgaacatcaattcataacacaattgtcatggtttctacacttttc 23557461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 7822137 - 7822173
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    ||||||||||||||||||||||||||||| |||||||    
T  7822137 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 7822173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 7829448 - 7829484
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    ||||||||||||||||||||||||||||| |||||||    
T  7829448 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 7829484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 27102497 - 27102461
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    ||||||||||||||||||||||||||||| |||||||    
T  27102497 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 27102461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 27109845 - 27109809
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    ||||||||||||||||||||||||||||| |||||||    
T  27109845 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 27109809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 27175829 - 27175865
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    ||||||||||||||||||||||||||||| |||||||    
T  27175829 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 27175865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 38784589 - 38784553
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    ||||||||||||||||||||||||||||| |||||||    
T  38784589 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 38784553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 15720435 - 15720478
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtca 44  Q
    |||||||||||||||||||||||  ||||||||| |||||||||    
T  15720435 acgtgtgaaaaagacgcaagaacatgaaacagggcatgctgtca 15720478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 37539272 - 37539327
Alignment:
Q  141 tttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctaca 196  Q
    ||||||| || ||||  |||||||||| ||||||||||||||| ||||||||||||    
T  37539272 tttcatctacccaaattccaaatttgataggaaacttaacctaagattattctaca 37539327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 8563957 - 8563911
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaag 47  Q
    ||||||||||||||||| ||||| |||||||||| |||| |||||||    
T  8563957 acgtgtgaaaaagacgcgagaacccgaaacagggtatgcagtcaaag 8563911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 205
Target Start/End: Complemental strand, 13315370 - 13315245
Alignment:
Q  80 gtggcgagttgcgacagacagctctacgggaacatgtcagtttccag-ccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaactta 178  Q
    ||||||| ||| |||||||| ||||||| |||||   |||||| ||  |||||||||| | ||| |||| || |||| ||||||||||| || |||||      
T  13315370 gtggcgaattgtgacagacatctctacgagaacagaccagttttcactccaaaaaccccaattt-catcaacccaaatcccaaatttgatagaaaactct 13315272  T
Q  179 acctatgattattctacagtctgaaca 205  Q
    ||||||||||||||||||  |||||||    
T  13315271 acctatgattattctacaacctgaaca 13315245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 14317757 - 14317811
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||||||||||||  |||| ||| ||||||||||  |||||||||    
T  14317757 acgtgtgaaaaagacgcaagaacatgaaataggagatgctgtcactgtgcagctc 14317811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 41523543 - 41523597
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||||||||||||  |||||||  ||||||||||  |||||||||    
T  41523543 acgtgtgaaaaagacgcaagaacatgaaacagaagatgctgtcatcgtgcagctc 41523597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 41526005 - 41526059
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||||||||||||  |||||||  ||||||||||  |||||||||    
T  41526005 acgtgtgaaaaagacgcaagaacatgaaacagaagatgctgtcatcgtgcagctc 41526059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 323
Target Start/End: Complemental strand, 14249764 - 14249711
Alignment:
Q  270 ctaacccccaattcccaatttcaactagaagtatgctaaaccaaaatcagaatt 323  Q
    |||| ||| |||||||||||| ||| |||| |||| ||||||||||||||||||    
T  14249764 ctaaacccaaattcccaattttaaccagaactatgttaaaccaaaatcagaatt 14249711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 15167661 - 15167706
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaa 46  Q
    ||||||||||||||| ||||||||||||| | || |||||||||||    
T  15167661 acgtgtgaaaaagacacaagaacgcgaaataaggaatgctgtcaaa 15167706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 18985096 - 18985055
Alignment:
Q  3 gtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtca 44  Q
    ||||||||||||||||||||| | |||||||||| |||||||    
T  18985096 gtgtgaaaaagacgcaagaacacaaaacaggggaagctgtca 18985055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 18999724 - 18999683
Alignment:
Q  3 gtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtca 44  Q
    ||||||||||||||||||||| | |||||||||| |||||||    
T  18999724 gtgtgaaaaagacgcaagaacacaaaacaggggaagctgtca 18999683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 33556735 - 33556702
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggg 34  Q
    |||||||||| |||||||||||||||||||||||    
T  33556735 acgtgtgaaatagacgcaagaacgcgaaacaggg 33556702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 257
Target Start/End: Complemental strand, 42374468 - 42374415
Alignment:
Q  204 catcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    |||| ||||||||||||||| | | ||||||||||||||||||| ||| |||||    
T  42374468 catcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 42374415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 26355516 - 26355464
Alignment:
Q  3 gtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||||||||||  |||||||  ||||||||||  |||||||||    
T  26355516 gtgtgaaaaagacgcaagaacatgaaacagaagatgctgtcactgtgcagctc 26355464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 26357968 - 26357916
Alignment:
Q  3 gtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||||||||||  |||||||  ||||||||||  |||||||||    
T  26357968 gtgtgaaaaagacgcaagaacatgaaacagaagatgctgtcactgtgcagctc 26357916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 47975119 - 47975055
Alignment:
Q  141 tttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaaca 205  Q
    ||||||| || ||||  |||||||||| || |||||||| ||||||||||||||||  |||||||    
T  47975119 tttcatctacccaaattccaaatttgatagaaaacttaatctatgattattctacaacctgaaca 47975055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 224; Significance: 1e-123; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 4 - 323
Target Start/End: Original strand, 12942818 - 12943137
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctc 103  Q
    |||||||||||||||||||||||||||||| |||||||||   |||||||||||||||||||||||||||| | |||||||||||||||||  ||| | |    
T  12942818 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgcagctcgcgaggcgagtaagtttactcactgtggcgagttgcgacgaacaaccc 12942917  T
Q  104 tacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaa 203  Q
    ||||||||||   |||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||  |||||||||| ||||||    
T  12942918 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatatttattctacaatctgaa 12943017  T
Q  204 catcgattcttaacacaattgccacggtttctacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaagtat 303  Q
    ||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  12943018 catcgattcttaacacaattgccatcgtttctacacttttcaatccaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaactat 12943117  T
Q  304 gctaaaccaaaatcagaatt 323  Q
    ||||||||||||||||||||    
T  12943118 gctaaaccaaaatcagaatt 12943137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 4 - 323
Target Start/End: Complemental strand, 28288870 - 28288552
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctc 103  Q
    |||||||||||||||||||||||||||||| |||||||||   |||||||||||||||||||||||||||| |||||||||||||||||||  ||| | |    
T  28288870 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 28288771  T
Q  104 tacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaa 203  Q
    ||||||||||   |||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||| |||||||||| ||||||    
T  28288770 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 28288671  T
Q  204 catcgattcttaacacaattgccacggtttctacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaagtat 303  Q
    ||||||||||||||||||||| || | ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  28288670 catcgattcttaacacaattgtcatgatttctacacttttcaatccaagaatcatactcc-aaaacctaacccccaattcccaatttcaactagaactat 28288572  T
Q  304 gctaaaccaaaatcagaatt 323  Q
    ||||||||||||||||||||    
T  28288571 gctaaaccaaaatcagaatt 28288552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 23956548 - 23956804
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  23956548 acgtgtgaaaaagacgcaagaacgcgaaataggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacagacaa 23956647  T
Q  101 ctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtct 200  Q
    |||||||||||||   |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||  ||    
T  23956648 ctctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacct 23956747  T
Q  201 gaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    ||||||| ||||||||||||||| | | ||||||||||||||||||| ||| |||||    
T  23956748 gaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 23956804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 4 - 257
Target Start/End: Original strand, 13765035 - 13765288
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctc 103  Q
    |||||||||||||||||||||||||||| || ||||||| |    |||||||| ||||||||| ||||||| |||||||||||||||||||||| | |||    
T  13765035 tgtgaaaaagacgcaagaacgcgaaacatggtatgctgtgactaggcagctcgtgaggcgagtgagtttactcgctgtggcgagttgcgacagaaaactc 13765134  T
Q  104 tacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaa 203  Q
    || |||||||   ||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||  |||||    
T  13765135 tatgggaacagaccagtttccagccaaaaacctaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaa 13765234  T
Q  204 catcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    |||| ||||||||||||||| | | ||||||||||||||||||| ||| |||||    
T  13765235 catcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 13765288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 19825855 - 19825667
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    ||||||||||||||||||||||| |||||||||| |||||||||  |||||||||||||||||||||||||||  ||||||||||||||||| ||||||     
T  19825855 acgtgtgaaaaagacgcaagaacacgaaacagggtatgctgtcactgtgcagctcgcgaggcgagtaagtttaatcgctgtggcgagttgcggcagacaa 19825756  T
Q  101 ctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgatta 189  Q
    || ||||||||||   |||||| |||||||||||||||||||||||||||  |||| |||||||||| |||||||||||||||||||||    
T  19825755 ctatacgggaacagaccagttttcagccaaaaacccaatttttcatccacctaaactccaaatttgataggaaacttaacctatgatta 19825667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 25807818 - 25807979
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||  ||||| |||||||||||||||||||||| ||||||||||||||||||||||||     
T  25807818 acgtgtgaaaaagacgcaagaacgcaaaacaggtgatgctgtcactgtgcatctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacagacaa 25807917  T
Q  101 ctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaa 162  Q
    |||||||||||||   ||||||||||| |||||||||||||||||||||| |||||||||||    
T  25807918 ctctacgggaacagaccagtttccagctaaaaacccaatttttcatccacccaaaccccaaa 25807979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 23415590 - 23415846
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||| |||||| ||||||| || |     
T  23415590 acgtgtgaaaaagacgcaagaacgcgaaacagggaatgctgtcaaagtgcagctcgcgaggcgagtaagtgtactcgctatggcgaattgcgacggaaaa 23415689  T
Q  101 ctctacgggaacatgtcagtt-tccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtc 199  Q
     ||||||||||||   ||||| ||   |||||| ||| |  ||||||| || |||| ||||||||||| |||||||| |||||||| ||||||||||| |    
T  23415690 atctacgggaacagaccagttgtcactccaaaagcccca-atttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcc 23415788  T
Q  200 tgaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    ||||| || ||||||||||||||| | | ||||||||| ||||||||| ||| |||||    
T  23415789 tgaacttcaattcttaacacaatttcgatggtttctacgcttttcaattcaaaaatca 23415846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 27557348 - 27557604
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||| ||||     
T  27557348 acgtgtgaaaaagacgcaagaacgcgaaacagggaatgctgtcaaagtgcagctcgcgaggcgattaagtgtactcgctgtggcgagttgcgacggacaa 27557447  T
Q  101 ctctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtc 199  Q
     ||||||||||||   || ||| ||  |||||| ||| |  ||||||| ||||||| ||||||||||| || ||||| |||||||| ||||||||||  |    
T  27557448 atctacgggaacagaccaattttcactccaaaagcccca-atttcatcgactcaaatcccaaatttgatagaaaactcaacctatgtttattctacaacc 27557546  T
Q  200 tgaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    ||||| || ||| ||||||||||| |   ||||||||||||||||||| ||| |||||    
T  27557547 tgaacttcaattattaacacaatttcgttggtttctacacttttcaattcaaaaatca 27557604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 15173821 - 15173607
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||     
T  15173821 acgtgtgaaaaacacgcaagaacgcgaaataggggatgctgtcaaagtgcagctcgcgaggcgagttagtttactcgctgtggcgagttgcgacggacaa 15173722  T
Q  101 ctctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtc 199  Q
     ||||||||||||    ||||| ||  |||||| ||| |  ||||||| |  |||| ||||||||||| |||||||| |||||||| |||| |||||| |    
T  15173721 atctacgggaacagactagttttcactccaaaagcccca-atttcatcaatccaaatcccaaatttgataggaaactcaacctatgtttatcctacaggc 15173623  T
Q  200 tgaacatcgattctta 215  Q
    ||||| || |||||||    
T  15173622 tgaacttcaattctta 15173607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 31022063 - 31021842
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||                      |||||||||||||||||     
T  31022063 acgtgtgaaaaagacgcaagaatgcgaaataggggatgctgtcaaagtgcagctcgcgag----------------------gcgagttgcgacagacaa 31021986  T
Q  101 ctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtct 200  Q
    |||||||||||||   |||   |||||||||||| ||| |||||||| || |||||||||||||||| ||||||||||||||||||||||||||||  ||    
T  31021985 ctctacgggaacagaccag---ccagccaaaaactcaaattttcatctacccaaaccccaaatttgataggaaacttaacctatgattattctacaacct 31021889  T
Q  201 gaacatcgattcttaacacaattgccacggtttctacacttttcaat 247  Q
    ||||||| ||||||||||||||| | |  ||||||||||||||||||    
T  31021888 gaacatcaattcttaacacaatttcgatagtttctacacttttcaat 31021842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 159 - 257
Target Start/End: Complemental strand, 23226066 - 23225968
Alignment:
Q  159 caaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    ||||||||| ||||||||||||||||||||||||||||  ||||||||| ||||||||||||||| | | ||||||||||||||||||| ||| |||||    
T  23226066 caaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 23225968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 53 - 215
Target Start/End: Complemental strand, 15891885 - 15891723
Alignment:
Q  53 ctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccact 151  Q
    |||||||||||||||||| ||| ||||||||||||||||||| ||||  ||||||||||||   |||||| ||  |||||| ||| |  ||||||| ||     
T  15891885 ctcgcgaggcgagtaagtgtactcgctgtggcgagttgcgacggacaaatctacgggaacagaccagttttcactccaaaagcccca-atttcatcaacc 15891787  T
Q  152 caaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattctta 215  Q
    |||| ||||||||||| |||||||| |||||||| ||||| ||||| |||||| || |||||||    
T  15891786 caaatcccaaatttgataggaaactcaacctatgtttattttacagcctgaacttcaattctta 15891723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 20556243 - 20556156
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||||  || |||||||||||||||||||||||||  ||||||||| ||||||||||||||| ||| ||||||||||||||||    
T  20556243 cccaaatttgttagaaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 20556156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 25619106 - 25619023
Alignment:
Q  159 caaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttt 242  Q
    ||||||||  ||||||||||||||||||||||||||||  ||||||||| ||||||||||||||| ||| ||||||||||||||    
T  25619106 caaatttgttaggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttt 25619023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 244
Target Start/End: Complemental strand, 14978739 - 14978665
Alignment:
Q  170 ggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    |||||||||||||||||||||||||||  ||||||||| ||||||||||||||| ||| ||||||||||||||||    
T  14978739 ggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 14978665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 215
Target Start/End: Complemental strand, 15900967 - 15900808
Alignment:
Q  56 gcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaa 154  Q
    ||||||||||||||| ||| ||||||||||||||||||| ||||  ||||||||||||   |||||| ||  |||||| ||| |  ||||||| || |||    
T  15900967 gcgaggcgagtaagtgtactcgctgtggcgagttgcgacggacaaatctacgggaacagaccagttttcactccaaaagcccca-atttcatcaacccaa 15900869  T
Q  155 accccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattctta 215  Q
    | ||||||||||| |||||||| |||||||| ||||| ||||| |||||| || |||||||    
T  15900868 atcccaaatttgataggaaactcaacctatgtttattttacagcctgaacttcaattctta 15900808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 611641 - 611728
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||||  |||||||||||||||||||||||||||   ||||||||  |||| ||||||||||| || ||||||||||||||||    
T  611641 cccaaatttgttaggaaacttaacctatgattattctaccacctgaacattaattcctaacacaattgtcatggtttctacacttttc 611728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 321
Target Start/End: Complemental strand, 9185132 - 9185043
Alignment:
Q  232 ttctacacttttcaatacaagaatcatactccaaaaacctaacccccaattccc-aatttcaactagaagtatgctaaaccaaaatcagaa 321  Q
    |||||||||||| ||| ||| ||||||||||||||| ||||||| | |||| || ||||||||||||||   |||||||||||||||||||    
T  9185132 ttctacactttttaattcaaaaatcatactccaaaa-cctaacctctaatttcctaatttcaactagaaccttgctaaaccaaaatcagaa 9185043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 17857056 - 17857002
Alignment:
Q  3 gtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgc 57  Q
    |||||||||||| |||||||||||||||| |||||| |||||  |||||||||||    
T  17857056 gtgtgaaaaagatgcaagaacgcgaaacatgggatgttgtcattgtgcagctcgc 17857002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 29045088 - 29045154
Alignment:
Q  141 tttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatc 207  Q
    ||||||| ||||||| ||||||||||| || |||||  ||||||||||||||||||  |||||||||    
T  29045088 tttcatcaactcaaatcccaaatttgatagaaaactctacctatgattattctacaacctgaacatc 29045154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 204
Target Start/End: Original strand, 10446015 - 10446099
Alignment:
Q  119 gtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaac 204  Q
    |||| ||||||||||||||| |||||| |||| |||| ||||||||  | |||||||| |||||||| |||||||| | |||||||    
T  10446015 gttttcagccaaaaacccaa-ttttcaaccacccaaatcccaaattcaaaaggaaactcaacctatgtttattctataatctgaac 10446099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 10488095 - 10488131
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    ||||||||||||||||||||||||||||| |||||||    
T  10488095 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 10488131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 16377233 - 16377197
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    ||||||||||||||||||||||||||||| |||||||    
T  16377233 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 16377197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 16384557 - 16384521
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    ||||||||||||||||||||||||||||| |||||||    
T  16384557 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 16384521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 16556930 - 16556894
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    |||||||||| ||||||||||||||||||||||||||    
T  16556930 gtgaaaaagatgcaagaacgcgaaacaggggatgctg 16556894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 16633486 - 16633450
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    |||||||||| ||||||||||||||||||||||||||    
T  16633486 gtgaaaaagatgcaagaacgcgaaacaggggatgctg 16633450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 323
Target Start/End: Original strand, 18138497 - 18138555
Alignment:
Q  265 aaaacctaacccccaattcccaatttcaactagaagtatgctaaacc-aaaatcagaatt 323  Q
    ||||||||||||| ||||| ||||||||||| ||| ||||||||||| ||||||||||||    
T  18138497 aaaacctaacccc-aattctcaatttcaactggaactatgctaaaccaaaaatcagaatt 18138555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35057190 - 35057233
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtca 44  Q
    |||||||||||||||||||||||  ||||||||| |||||||||    
T  35057190 acgtgtgaaaaagacgcaagaacatgaaacagggtatgctgtca 35057233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 19609706 - 19609756
Alignment:
Q  7 gaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgc 57  Q
    |||||||| ||||||||||||||||||||  |||||||  |||||||||||    
T  19609706 gaaaaagatgcaagaacgcgaaacagggggcgctgtcactgtgcagctcgc 19609756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 23656025 - 23656079
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    ||||||||||||||||||| |||  |||||||| ||||||||||  |||||||||    
T  23656025 acgtgtgaaaaagacgcaataacatgaaacaggagatgctgtcactgtgcagctc 23656079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 33862419 - 33862473
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||||||||||||  |||||||  ||||||||||  |||||||||    
T  33862419 acgtgtgaaaaagacgcaagaacatgaaacagaagatgctgtcactgtgcagctc 33862473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 1818763 - 1818839
Alignment:
Q  127 ccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaac 204  Q
    |||||||||||| |||||| |||| ||||  |||||||  | |||||||| |||||||| |||||||||| |||||||    
T  1818763 ccaaaaacccaa-ttttcaaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 1818839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 18452341 - 18452374
Alignment:
Q  3 gtgtgaaaaagacgcaagaacgcgaaacagggga 36  Q
    ||||||||||||||||||||||| ||||||||||    
T  18452341 gtgtgaaaaagacgcaagaacgcaaaacagggga 18452374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 25921424 - 25921473
Alignment:
Q  8 aaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgc 57  Q
    ||||||||||||||||||||||||||| | ||||||| || ||| |||||    
T  25921424 aaaaagacgcaagaacgcgaaacagggcaggctgtcagagagcaactcgc 25921473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 30674046 - 30673997
Alignment:
Q  16 gcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgag 65  Q
    ||||||||||||||||| ||||| |||||  |||||||||||||| ||||    
T  30674046 gcaagaacgcgaaacagtggatgttgtcactgtgcagctcgcgagacgag 30673997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 16650160 - 16650124
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    |||||||||| |||| |||||||||||||||||||||    
T  16650160 gtgaaaaagatgcaaaaacgcgaaacaggggatgctg 16650124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 18928409 - 18928449
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    |||||||||||||||||||||||  |||||||| |||||||    
T  18928409 acgtgtgaaaaagacgcaagaacatgaaacaggagatgctg 18928449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 25904599 - 25904635
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    |||||||||| |||| |||||||||||||||||||||    
T  25904599 gtgaaaaagatgcaaaaacgcgaaacaggggatgctg 25904635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 205; Significance: 1e-112; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 297041 - 297329
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||  |||||| ||||||||||||||||||||| |||||||||||||||||||  |||     
T  297041 acgtgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtcactgtgcagatcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaa 297140  T
Q  101 ctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtct 200  Q
    |||||||||||||   |||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||| ||||||||||  ||    
T  297141 ctctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaacct 297240  T
Q  201 gaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatt 289  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  297241 gaacatcgattcttaacacaattgccatggtttctacacttttcaattcaagaatcatactcccaaaacctaacccccaattcccaatt 297329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 28313034 - 28313290
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||    |||||||||||||||||||||||||| |||||||||||||||| |||||||     
T  28313034 acgtgtgaaaaagacgcaagaacgcgaaacagggtatgctgtcactaggcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcaacagacaa 28313133  T
Q  101 ctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtct 200  Q
    |||||||||||||   ||||||| ||||||||||  |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||| |||  ||    
T  28313134 ctctacgggaacagaccagtttctagccaaaaacgtaatttttcatccacccaaacctcaaatttgataggaaacttaacctatgattattccacaacct 28313233  T
Q  201 gaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    ||||||| ||||||||||||||| | | ||||| ||||||||||||| ||| |||||    
T  28313234 gaacatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatca 28313290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 8276358 - 8276170
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||||||||||||||||||||| ||||||||||| |||||||||  |||||||||||||||||||||||||||  |  ||||||||||||||| |||||     
T  8276358 acgtgtgaaaaagacgcaagaatgcgaaacagggtatgctgtcattgtgcagctcgcgaggcgagtaagtttaatcattgtggcgagttgcgagagacaa 8276259  T
Q  101 ctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgatta 189  Q
    |||||||||||||   |||||| |||||||||||||||||||||||||||  |||| |||||||||| |||||||||||||||||||||    
T  8276258 ctctacgggaacagaccagttttcagccaaaaacccaatttttcatccaccaaaactccaaatttgataggaaacttaacctatgatta 8276170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 50001160 - 50001374
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||     
T  50001160 acgtgtgcaaaagacgcaagaacgcgaaacaggggatgttgtcaaagtgcagctcgcgaggcgagtaagtttactcgttgtggcgagttgcgacagacaa 50001259  T
Q  101 ctctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtc 199  Q
     |||||||||||||  |||||| ||  |||||| ||| |  ||||||| || |||| || |||||||| |||||||| ||| |||| ||||||||||| |    
T  50001260 atctacgggaacataccagttttcactccaaaagcccca-atttcatcaacccaaatccaaaatttgataggaaactcaacatatgtttattctacagcc 50001358  T
Q  200 tgaacatcgattctta 215  Q
    ||||| || |||||||    
T  50001359 tgaacttcaattctta 50001374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 29764000 - 29763786
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||||||||||||  ||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||     
T  29764000 acgtgtgaaaaagttgcaagaatgcgaaacaaaggatgctgtcaaagtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacggacaa 29763901  T
Q  101 ctctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtc 199  Q
     ||||||||||||   |||||| ||  |||||| ||| |  |||||||||| |||| ||||||||||| |||||||| ||| |||| |||||||||||||    
T  29763900 atctacgggaacagaccagttttcactccaaaagcccca-atttcatccacccaaatcccaaatttgataggaaactcaacttatgtttattctacagtc 29763802  T
Q  200 tgaacatcgattctta 215  Q
    | ||| || |||||||    
T  29763801 taaacttcaattctta 29763786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 87 - 189
Target Start/End: Complemental strand, 38056954 - 38056853
Alignment:
Q  87 gttgcgacagacagctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatga 186  Q
    ||||||||||||| |||||||||||||   |||||| |||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||    
T  38056954 gttgcgacagacaactctacgggaacagaccagttttcagccaaaaacccaatttttca-ccacccaaaccccaaatttgataggaaacttaacctatga 38056856  T
Q  187 tta 189  Q
    |||    
T  38056855 tta 38056853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 141 - 257
Target Start/End: Complemental strand, 22130252 - 22130136
Alignment:
Q  141 tttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacact 240  Q
    ||||||| || |||| ||||||||||| ||||||||||||||||||||||||||||  || |||||| |||||||||||||||   | ||||||||||||    
T  22130252 tttcatctacccaaatcccaaatttgataggaaacttaacctatgattattctacaaccttaacatcaattcttaacacaattttgatggtttctacact 22130153  T
Q  241 tttcaatacaagaatca 257  Q
    ||||||| ||| |||||    
T  22130152 tttcaattcaaaaatca 22130136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 45574230 - 45574130
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatc 256  Q
    ||||||||||| ||||||||||||||||||||||||||||  ||||||||| ||||||||||||||| | | ||||||| ||||||||||| ||| ||||    
T  45574230 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctgcacttttcaattcaaaaatc 45574131  T
Q  257 a 257  Q
    |    
T  45574130 a 45574130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 13880745 - 13880660
Alignment:
Q  159 caaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||  ||||||||||||||||||||||||||||  ||||||||| ||||||||||||||| ||| ||||||||||||||||    
T  13880745 caaatttgttaggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 13880660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 38057017 - 38056955
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcg 63  Q
    |||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||    
T  38057017 acgtgtgaaaaagacgcaagaacgcgaaacagggtatgctgtcactgtgcagctcgcgaggcg 38056955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 46198088 - 46198026
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagt 66  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||    
T  46198088 tgtgaaaaagacgcaagaacgcaaaataggggatgctgtcaaagtgtagctcgcgaggcgagt 46198026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 23194739 - 23194667
Alignment:
Q  141 tttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattct 213  Q
    ||||||| || ||||| |||||||||| ||||||||||||||||||||||||||||  ||||||||| |||||    
T  23194739 tttcatctacccaaactccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattct 23194667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 8306414 - 8306492
Alignment:
Q  127 ccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaaca 205  Q
    ||||||| ||||  ||||||| || |||| ||||||||||| |||||||||||||||||||||||| ||| ||||||||    
T  8306414 ccaaaaaaccaaaatttcatctacccaaatcccaaatttgataggaaacttaacctatgattattcaacaatctgaaca 8306492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 215
Target Start/End: Complemental strand, 46198032 - 46197899
Alignment:
Q  82 ggcgagttgcgacagacagctctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaac 180  Q
    ||||||||||||| ||||  |||||||||||||  |||||| ||  |||||| ||| |  ||||||| || |||| ||||||||||| |||||||| |||    
T  46198032 ggcgagttgcgacggacaaatctacgggaacataccagttttcactccaaaagcccca-atttcatcaacccaaatcccaaatttgataggaaactcaac 46197934  T
Q  181 ctatgattattctacagtctgaacatcgattctta 215  Q
    ||||| ||||||||||| |||||| || |||||||    
T  46197933 ctatgtttattctacagcctgaacttcaattctta 46197899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 214 - 321
Target Start/End: Complemental strand, 21526933 - 21526827
Alignment:
Q  214 taacacaattgccacggtttctacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaagta-tgctaaacca 312  Q
    |||||| ||||||| || |||| |||| || ||| ||| ||||||| ||  ||||||||||||||||||| |||||||||||||||  | ||||||||||    
T  21526933 taacactattgccatggattcttcactctttaattcaaaaatcataatc--aaaacctaacccccaattctcaatttcaactagaaccattgctaaacca 21526836  T
Q  313 aaatcagaa 321  Q
    |||||||||    
T  21526835 aaatcagaa 21526827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 9784702 - 9784653
Alignment:
Q  8 aaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgc 57  Q
    ||||||||||||||||||||||||||||||| |||||  |||||||||||    
T  9784702 aaaaagacgcaagaacgcgaaacaggggatgttgtcactgtgcagctcgc 9784653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 24723677 - 24723624
Alignment:
Q  152 caaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaaca 205  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||  |||||||    
T  24723677 caaatcccaaatttgataggaaacttaacctatgattattctacaacctgaaca 24723624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 38887453 - 38887399
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||||||||||||  |||||||  ||||||||||| |||||||||    
T  38887453 acgtgtgaaaaagacgcaagaacatgaaacagaagatgctgtcaatgtgcagctc 38887399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 41225821 - 41225767
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||||||||||||  |||||||| ||||||||||  |||||||||    
T  41225821 acgtgtgaaaaagacgcaagaacatgaaacaggagatgctgtcattgtgcagctc 41225767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 41227074 - 41227020
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||||||||||||  |||||||| ||||||||||  |||||||||    
T  41227074 acgtgtgaaaaagacgcaagaacatgaaacaggagatgctgtcattgtgcagctc 41227020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 18060560 - 18060527
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatg 38  Q
    ||||||||||||||||||||||||||||||||||    
T  18060560 gtgaaaaagacgcaagaacgcgaaacaggggatg 18060527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 29535677 - 29535710
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggg 34  Q
    ||||||||||||||||||||||||||||||||||    
T  29535677 acgtgtgaaaaagacgcaagaacgcgaaacaggg 29535710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 7052241 - 7052177
Alignment:
Q  141 tttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaaca 205  Q
    ||||||| || |||| ||||||| ||| ||||||||||||||||||||||| ||||  |||||||    
T  7052241 tttcatctacccaaatcccaaatatgataggaaacttaacctatgattattttacaacctgaaca 7052177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 17004033 - 17004069
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    ||||||||||||||||||||||||||||| |||||||    
T  17004033 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 17004069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 196
Target Start/End: Original strand, 34392541 - 34392644
Alignment:
Q  92 gacagacagctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattatt 191  Q
    ||||||||| |||||||||| |   | |||| ||||||||||||||| ||||||  ||| |||| ||||||||  | |||||||| |||||||| |||||    
T  34392541 gacagacagttctacgggaagaaacctgttttcagccaaaaacccaa-ttttcaagcacccaaatcccaaattcaaaaggaaactcaacctatgtttatt 34392639  T
Q  192 ctaca 196  Q
    |||||    
T  34392640 ctaca 34392644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 38055937 - 38055901
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    ||||||||||||||||||||||||||||| |||||||    
T  38055937 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 38055901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 6833900 - 6833943
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtca 44  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  6833900 acgtgtgaaaaagacgcaagaatatgaaacaggggatgctgtca 6833943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 21046415 - 21046360
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcg 56  Q
    |||||||||||||||||||||||  ||||||||  |||||||||||| ||| ||||    
T  21046415 acgtgtgaaaaagacgcaagaacatgaaacaggacatgctgtcaaagagcaactcg 21046360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 323
Target Start/End: Original strand, 24476279 - 24476338
Alignment:
Q  265 aaaacctaacccccaattcccaatttcaactagaagtatgctaaa-ccaaaatcagaatt 323  Q
    |||| |||| ||| ||||||||||||| ||||||| ||||||||| ||||||||||||||    
T  24476279 aaaatctaaacccaaattcccaatttctactagaactatgctaaacccaaaatcagaatt 24476338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 21841392 - 21841446
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||||||||||||  |||||||  ||||||||||  |||||||||    
T  21841392 acgtgtgaaaaagacgcaagaacatgaaacagaagatgctgtcactgtgcagctc 21841446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 21922828 - 21922774
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||||||||||||  |||||||  ||||||||||  |||||||||    
T  21922828 acgtgtgaaaaagacgcaagaacatgaaacagaagatgctgtcactgtgcagctc 21922774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 323
Target Start/End: Original strand, 5381568 - 5381625
Alignment:
Q  266 aaacctaacccccaattcccaatttcaactagaagtatgctaaaccaaaatcagaatt 323  Q
    |||||||  ||| |||||||||||||||| ||||  ||| ||||||||||||||||||    
T  5381568 aaacctagacccaaattcccaatttcaaccagaaacatgttaaaccaaaatcagaatt 5381625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 17902030 - 17901966
Alignment:
Q  141 tttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaaca 205  Q
    ||||||| || |||| ||||||||||| || |||||  ||||||||||||||||||  |||||||    
T  17902030 tttcatcaacccaaatcccaaatttgatagaaaactctacctatgattattctacaacctgaaca 17901966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 323
Target Start/End: Complemental strand, 21986124 - 21986080
Alignment:
Q  279 aattcccaatttcaactagaagtatgctaaaccaaaatcagaatt 323  Q
    |||||||||||| ||| |||| |||| ||||||||||||||||||    
T  21986124 aattcccaattttaaccagaactatgttaaaccaaaatcagaatt 21986080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 189; Significance: 1e-102; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 8414115 - 8413859
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  8414115 acgtgtgaaaaagacgcaagaacgcgaaataggggatgctgtcaaagtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacagacaa 8414016  T
Q  101 ctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtct 200  Q
    |||||||||||||   |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||  ||    
T  8414015 ctctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacct 8413916  T
Q  201 gaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    ||||||| ||||||||||||||| | | ||||||||||||||||||| ||| |||||    
T  8413915 gaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 8413859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 11775408 - 11775655
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||     
T  11775408 acgtgtgaaaaagacgcaagaacgcgaaataggggatgctgtcaaagtgcagctcgcgaggcgagtacgtttactcgctgtggcgagttgcgacagacaa 11775507  T
Q  101 ctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtct 200  Q
    |||||||||||||   |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||         |    
T  11775508 ctctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattat---------t 11775598  T
Q  201 gaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    ||||||| ||||||||||||||| | | ||||||||||||||||||| ||| |||||    
T  11775599 gaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 11775655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 17795918 - 17796079
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||| |||     
T  17795918 acgtgtgaaaaagacgctagaacgcgaaacaggtgatgctgtcactgtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacatacaa 17796017  T
Q  101 ctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaa 162  Q
    |||||||| ||||   |||||||||||||||||||||||||||||||||| |||||||||||    
T  17796018 ctctacggaaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaa 17796079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 8 - 247
Target Start/End: Complemental strand, 14397269 - 14397031
Alignment:
Q  8 aaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctctacg 107  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||  ||||||    
T  14397269 aaaaagatgcaagaacgcgaaacagggaatgctgtcaaagtgcagctcgcgaggcgagtaagtgtactcgctgtggcgagttgcgacagacaaatctacg 14397170  T
Q  108 ggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacat 206  Q
    ||||||   |||||| ||  |||||| ||| |  ||||||| || ||||  |||||||||| |||||||| |||||||| ||||||||||| |||||| |    
T  14397169 ggaacagaccagttttcactccaaaagcccca-atttcatcaacccaaa-tccaaatttgataggaaactcaacctatgtttattctacagcctgaactt 14397072  T
Q  207 cgattcttaacacaattgccacggtttctacacttttcaat 247  Q
    | ||||||||||||||| | | |||||||||||||||||||    
T  14397071 caattcttaacacaatttcgatggtttctacacttttcaat 14397031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 76 - 257
Target Start/End: Original strand, 19882708 - 19882889
Alignment:
Q  76 cgctgtggcgagttgcgacagacagctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaac 175  Q
    |||||||||||||||| ||||||| ||||||||||||    ||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||    
T  19882708 cgctgtggcgagttgcaacagacaactctacgggaacggaccagtttccagccaaaaagccaatttttcatccacccaaaccccaaatttgataggaaac 19882807  T
Q  176 ttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    |||||||||||||||||||||  ||||||||| ||| ||||||||||| | | ||||||||||||||||||| ||| |||||    
T  19882808 ttaacctatgattattctacaacctgaacatcaatttttaacacaatttcgatggtttctacacttttcaattcaaaaatca 19882889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 3 - 215
Target Start/End: Original strand, 16198522 - 16198734
Alignment:
Q  3 gtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagct 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||| ||||||||||||||||| | ||||  |    
T  16198522 gtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcaaatcgcgaggcgagtaagtgtactcgctgtggcgagttgcggcggacaaat 16198621  T
Q  103 ctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctg 201  Q
    ||||||||| |   |||||| ||  |||||| ||| |  ||||||| || |||| ||||||||||| |||||||| |||||||| ||||||||||| |||    
T  16198622 ctacgggaatagaccagttttcactccaaaagcccca-atttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctg 16198720  T
Q  202 aacatcgattctta 215  Q
    ||| || |||||||    
T  16198721 aacttcaattctta 16198734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 23478766 - 23478980
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| || |||||||||||| ||||     
T  23478766 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaagcgagtaagtttactcgcagtagcgagttgcgacggacaa 23478865  T
Q  101 ctctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtc 199  Q
     ||||||||||||   || ||| ||  || ||| ||| |  ||||||| || |||| || |||||||| |||||||| |||||||| ||||||||||| |    
T  23478866 atctacgggaacagaccatttttcactcctaaagcccca-atttcatcaacccaaatcctaaatttgataggaaactcaacctatgtttattctacagcc 23478964  T
Q  200 tgaacatcgattctta 215  Q
    ||||| || |||||||    
T  23478965 tgaacttcaattctta 23478980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 25657879 - 25657668
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctc 103  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||  |     
T  25657879 tgtgaaaaagacgcaagaacacgaaataggggatgctgtcaaagtgcatctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacggacaaatt 25657780  T
Q  104 tacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaa 203  Q
    |||| |||||   || ||| ||  | |||| ||    ||||||| || |||| ||||||||||| |||||||| |||||||| ||||||||||| |||||    
T  25657779 tacgagaacagaccatttttcactctaaaagccccaatttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaa 25657680  T
Q  204 catcgattctta 215  Q
    |||| |||||||    
T  25657679 catcaattctta 25657668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 19880514 - 19880721
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||||||||||||||||| ||||     
T  19880514 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgaagctcgcgaggcgtgcaagtttactcgctgtggcgagttgcgacggacaa 19880613  T
Q  101 ctctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtc 199  Q
     ||||||||||||   |||||| ||  |||||| ||| |  |||||||       | ||||||||||| |||||||| |||||||| ||||||||||| |    
T  19880614 atctacgggaacagaccagttttcactccaaaagcccca-atttcatc-------aacccaaatttgataggaaactcaacctatgtttattctacagcc 19880705  T
Q  200 tgaacatcgattctta 215  Q
    ||||| || |||||||    
T  19880706 tgaacttcaattctta 19880721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 26454397 - 26454509
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||| ||||     
T  26454397 acgtgtgaaaaagatgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagcaagtttactcgctgtggcgagttacgacggacaa 26454496  T
Q  101 ctctacgggaaca 113  Q
     ||||||||||||    
T  26454497 atctacgggaaca 26454509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 25483652 - 25483552
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatc 256  Q
    ||||||||||| ||||||||||||||||||||||||||||  || |||||| ||||||||||||||| | | ||||||||||||||||||| ||| ||||    
T  25483652 cccaaatttgataggaaacttaacctatgattattctacaacctaaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatc 25483553  T
Q  257 a 257  Q
    |    
T  25483552 a 25483552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 23661140 - 23661225
Alignment:
Q  159 caaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||  ||||||||||||||||||||||||||||  ||||||||| ||||||||||||||| ||| ||||||||||||||||    
T  23661140 caaatttgttaggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 23661225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 160 - 244
Target Start/End: Original strand, 20455831 - 20455915
Alignment:
Q  160 aaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    |||||||  ||||||||||||||||||||||||||||  ||||||||| ||||||||||||||| ||| ||||||||||||||||    
T  20455831 aaatttgttaggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 20455915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 244
Target Start/End: Original strand, 20463048 - 20463123
Alignment:
Q  169 aggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||||||||||||||||||||||  ||||||||| ||||||||||||||| ||| ||||||||||||||||    
T  20463048 aggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 20463123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 244
Target Start/End: Complemental strand, 17460405 - 17460331
Alignment:
Q  170 ggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    |||||||||||||||||||||||||||  ||||||||| ||||||||||||||| ||| ||||||||||||||||    
T  17460405 ggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 17460331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 20460809 - 20460888
Alignment:
Q  160 aaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacac 239  Q
    |||||||  ||||||||||||||||||||||||||||  ||||||||| ||||||||||||||| ||| |||||||||||    
T  20460809 aaatttgttaggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacac 20460888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 20455095 - 20455174
Alignment:
Q  160 aaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacac 239  Q
    |||||||  |||| |||||||||||||||||||||||  ||||||||| ||||||||||||||| ||| |||||||||||    
T  20455095 aaatttgttaggacacttaacctatgattattctacaacctgaacatcaattcttaacacaattaccatggtttctacac 20455174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 24907462 - 24907516
Alignment:
Q  3 gtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgc 57  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  24907462 gtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcactgtgcagctcgc 24907516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 321
Target Start/End: Original strand, 22617542 - 22617641
Alignment:
Q  221 attgccacggtttctacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaa-gtatgctaaaccaaaatcag 319  Q
    ||||||| |||||||||||| || ||| ||| ||||| | ||  |||||||||||||||||||||||||||||||||||    |||||||||||||||||    
T  22617542 attgccatggtttctacactctttaattcaaaaatcaaaatc--aaaacctaacccccaattcccaatttcaactagaacccttgctaaaccaaaatcag 22617639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 15319974 - 15319938
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    |||||||||||||||||||||||||||||||||||||    
T  15319974 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 15319938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 15500343 - 15500307
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    |||||||||||||||||||||||||||||||||||||    
T  15500343 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 15500307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 22147101 - 22147137
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    |||||||||||||||||||||||||||||||||||||    
T  22147101 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 22147137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 92 - 204
Target Start/End: Complemental strand, 22610542 - 22610431
Alignment:
Q  92 gacagacagctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattatt 191  Q
    ||||||||| |||||||||| |   | |||| ||||||||||||||| |||||| |||| |||| || |||||  | |||||||| |||||||| |||||    
T  22610542 gacagacagttctacgggaagaaacctgttttcagccaaaaacccaa-ttttcaaccacccaaatccaaaattcaaaaggaaactcaacctatgtttatt 22610444  T
Q  192 ctacagtctgaac 204  Q
    ||||| |||||||    
T  22610443 ctacaatctgaac 22610431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 36732701 - 36732649
Alignment:
Q  152 caaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaac 204  Q
    |||| ||||||||||| ||||||||| |||||||||||||||||| |||||||    
T  36732701 caaatcccaaatttgataggaaacttgacctatgattattctacaatctgaac 36732649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 36405426 - 36405372
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||||||||||||  |||||||| ||||||||||  |||||||||    
T  36405426 acgtgtgaaaaagacgcaagaacatgaaacaggagatgctgtcaccgtgcagctc 36405372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 643700 - 643736
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    ||||||||||||||||||||||||||||| |||||||    
T  643700 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 643736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 18612076 - 18612112
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    ||||||||||||||||||| |||||||||||||||||    
T  18612076 gtgaaaaagacgcaagaacacgaaacaggggatgctg 18612112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 22089358 - 22089322
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    |||||||||| ||||||||||||||||||||||||||    
T  22089358 gtgaaaaagatgcaagaacgcgaaacaggggatgctg 22089322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 17978780 - 17978729
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    ||||||||||||||||||||  |||||||| ||||||||||  |||||||||    
T  17978780 tgtgaaaaagacgcaagaacatgaaacaggagatgctgtcactgtgcagctc 17978729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 19882654 - 19882697
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtca 44  Q
    ||||||| |||||||||||||||||||||||||| ||| |||||    
T  19882654 acgtgtgcaaaagacgcaagaacgcgaaacagggtatgatgtca 19882697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21399396 - 21399439
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtca 44  Q
    |||||||||||||||||||||||  ||||||||| |||||||||    
T  21399396 acgtgtgaaaaagacgcaagaacatgaaacagggcatgctgtca 21399439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21793889 - 21793932
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtca 44  Q
    |||||||||||||||||||||||  ||||||||| |||||||||    
T  21793889 acgtgtgaaaaagacgcaagaacatgaaacagggcatgctgtca 21793932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 22474440 - 22474491
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    ||||||||||||||||||||  |||||||| ||||||||||  |||||||||    
T  22474440 tgtgaaaaagacgcaagaacatgaaacaggagatgctgtcactgtgcagctc 22474491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 204
Target Start/End: Original strand, 26454546 - 26454593
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaac 204  Q
    ||||||||||| |||||||| |||||||| ||||||||||| ||||||    
T  26454546 cccaaatttgataggaaactcaacctatgtttattctacagcctgaac 26454593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 29763235 - 29763192
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtca 44  Q
    |||||||||||||||||||||||  |||||||| ||||||||||    
T  29763235 acgtgtgaaaaagacgcaagaacatgaaacaggagatgctgtca 29763192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 272149 - 272115
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgc 39  Q
    ||||||||||||||||||||||||||||| |||||    
T  272149 gtgaaaaagacgcaagaacgcgaaacaggagatgc 272115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 829506 - 829540
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgc 39  Q
    ||||||||||||||||||||||||||||| |||||    
T  829506 gtgaaaaagacgcaagaacgcgaaacaggagatgc 829540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 18677601 - 18677547
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||||||||||||  |||||||  ||||||||||  |||||||||    
T  18677601 acgtgtgaaaaagacgcaagaacatgaaacagaagatgctgtcactgtgcagctc 18677547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 20879313 - 20879371
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattctta 215  Q
    ||||||||||||||||||| | ||||||  ||||||||||  ||||||||| |||||||    
T  20879313 cccaaatttgacaggaaacattacctattgttattctacaacctgaacatcaattctta 20879371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 22207953 - 22208007
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||||||||||||   ||||||| ||||||||||  |||||||||    
T  22207953 acgtgtgaaaaagacgcaagaacataaaacaggagatgctgtcactgtgcagctc 22208007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 18618953 - 18618989
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    |||||||||| |||||||||||||| |||||||||||    
T  18618953 gtgaaaaagatgcaagaacgcgaaataggggatgctg 18618989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 23883977 - 23884056
Alignment:
Q  124 cagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaac 204  Q
    ||||||||||||||| ||| || |||| |||| | ||||||  | |||||||| |||||||| |||||||||| |||||||    
T  23883977 cagccaaaaacccaa-tttgcaaccacccaaatcgcaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 23884056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 173; Significance: 5e-93; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 169125 - 169381
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||| |||||  |||||||||||||||||||||||     
T  169125 acgtgtgaaaaagacgcaagaacgcaaaataggggatgctgtcaaagtgcaggtcgcgaggcgagtaaatttacttgctgtggcgagttgcgacagacaa 169224  T
Q  101 ctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtct 200  Q
    |||||||||||||   |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||  ||    
T  169225 ctctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacct 169324  T
Q  201 gaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    |||| || ||||||||||||||| | | ||||||||||||||||||| ||| |||||    
T  169325 gaacttcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 169381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 176478 - 176734
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||| |||||  |||||||||||||||||||||||     
T  176478 acgtgtgaaaaagacgcaagaacgcaaaataggggatgctgtcaaagtgcaggtcgcgaggcgagtaaatttacttgctgtggcgagttgcgacagacaa 176577  T
Q  101 ctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtct 200  Q
    |||||||||||||   |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||  ||    
T  176578 ctctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacct 176677  T
Q  201 gaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    |||| || ||||||||||||||| | | ||||||||||||||||||| ||| |||||    
T  176678 gaacttcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 176734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 153; Significance: 5e-81; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 3649 - 3905
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||||||||||||||||||||||| |||||||| ||||||||||  |||||| ||||||||||||||||||||| |||||||||||||||||||  |||     
T  3649 acgtgtgaaaaagacgcaagaacgtgaaacaggtgatgctgtcactgtgcagatcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaa 3748  T
Q  101 ctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtct 200  Q
    |||||||||||||   |||||| ||||| ||||||||||||||||||||| |||||||||||||||| |||||||| |||||||| |||||| |||  ||    
T  3749 ctctacgggaacagaccagttttcagccgaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattcaacaacct 3848  T
Q  201 gaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    ||||||||||||||||||||||| | | ||||||||||||||||||| ||| |||||    
T  3849 gaacatcgattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 3905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 126; Significance: 6e-65; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 48 - 257
Target Start/End: Complemental strand, 7330 - 7121
Alignment:
Q  48 tgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctctacgggaacatgtcagtttccagccaaaaacccaatttttcatc 147  Q
    ||||||||||||||||||||||||||| || ||||| | ||||||||  ||| |||||||||||||   |||||| ||||||||||||||||||||||||    
T  7330 tgcagctcgcgaggcgagtaagtttactcgatgtggtgtgttgcgacgaacaactctacgggaacagaccagttttcagccaaaaacccaatttttcatc 7231  T
Q  148 cactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttcaat 247  Q
    ||| |||||||||||||||| |||||||| |||||||| ||||||||||| ||||||||||||||||||||||||| | | |||||||||||||||||||    
T  7230 cacccaaaccccaaatttgataggaaactcaacctatgtttattctacagcctgaacatcgattcttaacacaatttcgatggtttctacacttttcaat 7131  T
Q  248 acaagaatca 257  Q
     ||| |||||    
T  7130 tcaaaaatca 7121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 126; Significance: 6e-65; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 18279 - 18535
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||| || |     
T  18279 acgtgtgaaaaagacgcaagaacgcgaaacagggaatgctgtcaaagtgaagctcgcgaggcgagtaagtgtactcgctgtggcgagttgcgacggaaaa 18378  T
Q  101 ctctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtc 199  Q
     ||||||||||||  ||||||| ||  |||||| ||| |  ||||||| || |||| ||||||||||| |||||||| |||||||| ||||||||||| |    
T  18379 atctacgggaacagatcagttttcactccaaaagcccca-ctttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcc 18477  T
Q  200 tgaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    ||||| || ||||||||||||||| | | ||||||||||||||||||| ||| |||||    
T  18478 tgaacttcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 18535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 19010 - 18824
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    ||||| |||||||||||||||||||||||||||| ||| |||||  ||||||||||||||||||||| |||||| ||||||||| ||||| ||||||||     
T  19010 acgtgagaaaaagacgcaagaacgcgaaacagggtatgttgtcactgtgcagctcgcgaggcgagtatgtttactcgctgtggctagttgtgacagacaa 18911  T
Q  101 ctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgat 187  Q
    ||||||| |||||   |||||| |||||||||||| || ||||||||||| |||||| ||||||||| |||||||||||||||||||    
T  18910 ctctacgagaacagaccagttttcagccaaaaaccaaaattttcatccacccaaaccacaaatttgataggaaacttaacctatgat 18824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 104; Significance: 8e-52; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 8644 - 8858
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||| ||||     
T  8644 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttactcgctgggtcgagttgcgacggacaa 8743  T
Q  101 ctctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtc 199  Q
     |||| |||||||   |||||| ||  |||||| ||| |  ||||||| ||||||| | ||||||||| |||||||| |||||||| ||||||||||| |    
T  8744 atctatgggaacaaaccagttttcactccaaaagcccca-atttcatcaactcaaatctcaaatttgataggaaactcaacctatgtttattctacagcc 8842  T
Q  200 tgaacatcgattctta 215  Q
    ||||| || |||||||    
T  8843 tgaacttcaattctta 8858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 104; Significance: 8e-52; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 1621 - 1835
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||     
T  1621 acgtgtgaaaaagacgcaagaacgcaaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttactcgctgtggcgagtggcgacggacaa 1720  T
Q  101 ctctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtc 199  Q
     ||||||||||||   |||||| ||  |||||| ||| |  ||||||| || |||| || |||||||| |||||||| |||||||| ||||||||||| |    
T  1721 atctacgggaacagaccagttttcactccaaaagcccca-atttcatcaacccaaatccaaaatttgataggaaactcaacctatgtttattctacagcc 1819  T
Q  200 tgaacatcgattctta 215  Q
    ||||| || |||||||    
T  1820 tgaacttcaattctta 1835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 172 - 244
Target Start/End: Original strand, 42153 - 42225
Alignment:
Q  172 aaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    |||||||||||||||||||||||||   |||||||| ||||||||||||||| ||| ||||||||||||||||    
T  42153 aaacttaacctatgattattctacaacatgaacatcaattcttaacacaattaccatggtttctacacttttc 42225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 31829 - 32084
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||   ||||| ||||||||||| ||| ||||||||||||||||||| ||||     
T  31829 acgtgtgaaaaagacgaaagaacgcgaaacagggaatgctgtcaaagtgccaatcgcggggcgagtaagtgtactcgctgtggcgagttgcgacggacaa 31928  T
Q  101 ctctacgggaacatgtcagt-ttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtc 199  Q
     ||||||||||||   || | |||   |||||| ||| |  ||||||| || |||| ||||||||||| |||||||| |||||||| ||||||||||| |    
T  31929 atctacgggaacagaccaatattcactccaaaagcccca-atttcatcaacccaaatcccaaatttgataggaaactcaacctatg-ttattctacagcc 32026  T
Q  200 tgaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    ||||| || | ||||||||||||| | | ||||||||||||||||||| ||| |||||    
T  32027 tgaacttcaactcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 32084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 13632 - 13820
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||| |||||||||||||||||||||||  |||| ||  |||||   ||||||||||||||||||||||||||  || ||||| |||||||||||||||     
T  13632 acgtctgaaaaagacgcaagaacgcgaattagggtattgtgtcactatgcagctcgcgaggcgagtaagtttaatcgttgtggggagttgcgacagacaa 13731  T
Q  101 ctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgatta 189  Q
    || ||||||||||   |||||| |||| |||||||  ||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  13732 ctttacgggaacagaccagttttcagcgaaaaaccttatttttcatccacccaaaccccaaatttgataggaaacttaacctatgatta 13820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 8887 - 8951
Alignment:
Q  79 tgtggcgagttgcgacagacagctctacgggaacatgtcagtttccagccaaaaacccaattttt 143  Q
    |||||||| |||||||| ||| |||||||||||||   |||||| ||||||||||||||||||||    
T  8887 tgtggcgacttgcgacaaacaactctacgggaacagaccagttttcagccaaaaacccaattttt 8951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 14949 - 14740
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctc 103  Q
    |||||||||||||||| |||  |||||||| |||| |||||  |||||  ||||||||||||||||||||| || ||||||||||||||||  ||| |||    
T  14949 tgtgaaaaagacgcaataacctgaaacaggtgatgttgtcactgtgca--tcgcgaggcgagtaagtttactcgttgtggcgagttgcgacgaacaactc 14852  T
Q  104 tacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaa 203  Q
    ||||||||||   |  ||  ||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||| ||||||||||  |||||    
T  14851 tacgggaacagacctattatcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaacctgaa 14752  T
Q  204 catcgattctta 215  Q
    | || |||||||    
T  14751 cttcaattctta 14740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 24007 - 23798
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctc 103  Q
    |||||||||||||||| |||  |||||||| |||| |||||  |||||  ||||||||||||||||||||| || ||||||||||||||||  ||| |||    
T  24007 tgtgaaaaagacgcaataacctgaaacaggtgatgttgtcactgtgca--tcgcgaggcgagtaagtttactcgttgtggcgagttgcgacgaacaactc 23910  T
Q  104 tacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaa 203  Q
    ||||||||||   |  ||  ||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||| ||||||||||  |||||    
T  23909 tacgggaacagacctattatcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaacctgaa 23810  T
Q  204 catcgattctta 215  Q
    | || |||||||    
T  23809 cttcaattctta 23798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 88; Significance: 3e-42; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 6144 - 6251
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  6144 acgtgtgaaaaggacgcaagaacgcgaaataggggatgctgtcaaagtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacagacaa 6243  T
Q  101 ctctacgg 108  Q
    ||||||||    
T  6244 ctctacgg 6251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 141 - 257
Target Start/End: Complemental strand, 40039 - 39923
Alignment:
Q  141 tttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacact 240  Q
    ||||||| || |||| ||||| ||||| ||||||||||||||||||||||||||||  ||||||||| ||||||||||||||| | | ||||||||||||    
T  40039 tttcatctacccaaatcccaattttgataggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctacact 39940  T
Q  241 tttcaatacaagaatca 257  Q
    ||||||| ||| |||||    
T  39939 tttcaattcaaaaatca 39923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 22132 - 21931
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacagctc 103  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| | ||||||||          ||||  ||    
T  22132 tgtgaaaaagacgcaagaacgcgaaacatgggatgctgtcaaagtgcagctcacgaggcgagtaagtttactcactgtggcg----------gacaaatc 22043  T
Q  104 tacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaa 203  Q
    |||||||||||| |||||| ||  |||||| ||    ||||||| || |||| ||||||||||| |||||||| |||||||| ||||||||||| |||||    
T  22042 tacgggaacatgccagttttcactcaaaaagccccaatttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaa 21943  T
Q  204 catcgattctta 215  Q
    |||| |||||||    
T  21942 catcaattctta 21931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 323
Target Start/End: Original strand, 71510 - 71554
Alignment:
Q  279 aattcccaatttcaactagaagtatgctaaaccaaaatcagaatt 323  Q
    |||||||||||| ||| |||| |||| ||||||||||||||||||    
T  71510 aattcccaattttaaccagaactatgttaaaccaaaatcagaatt 71554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 10907 - 11121
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||||||||||||| |||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||     
T  10907 acgtgtgaaaaagatgcaagaacgcgaaacaggagatgctgtaaaagtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacggacaa 11006  T
Q  101 ctctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtc 199  Q
     ||||||||||||   || ||| ||  |||||| ||| |  ||||||| ||  ||| ||||||||||| |||||||| ||  |||| ||||||||||| |    
T  11007 atctacgggaacagaccaattttcactccaaaagcccca-atttcatcaaccaaaatcccaaatttgataggaaactcaagatatgtttattctacagcc 11105  T
Q  200 tgaacatcgattctta 215  Q
    ||||| || |||||||    
T  11106 tgaacttcaattctta 11121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 84; Significance: 7e-40; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 33797 - 34010
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||| ||||     
T  33797 acgtgtgaaaaagacgcaagaacgcgaaacatgggatggtgtcaaagtgcagctcgcgcggcgagtaagtttactcgctgtggctagttgcgacggacaa 33896  T
Q  101 ctctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtc 199  Q
     |||| |||||||   |||||| ||  |||||| ||| |  ||||||| || |||| | ||||||||  |||||||| |||||||| ||||||||| |||    
T  33897 atctatgggaacagaccagttttcactccaaaagcccca-atttcatcaacccaaatctcaaatttg-taggaaactcaacctatgtttattctacggtc 33994  T
Q  200 tgaacatcgattctta 215  Q
    ||||| || |||||||    
T  33995 tgaacttcaattctta 34010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 20921 - 20995
Alignment:
Q  141 tttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattctta 215  Q
    ||||||| || |||| ||||||||||| |||||||| |||||||| ||||||||||| |||||| || |||||||    
T  20921 tttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattctta 20995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 4720 - 4913
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||| ||| |  |     
T  4720 acgtgtgaaaaagacgcaagaacgtgaaacaggggatgctgtcaaagtgcagctcgcggggcgagtaagtttactcgttgtggcgagttgggacgggaaa 4819  T
Q  101 ctctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattcta 194  Q
     |||||||||||||  |||||| ||  |||||| ||| |  ||||||| || | ||  |||||||||| |||||||| |||||||| ||||||||    
T  4820 atctacgggaacataccagttttcactccaaaagcccca-atttcatcaaccctaattccaaatttgaaaggaaactcaacctatgtttattcta 4913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 4720 - 4913
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttacacgctgtggcgagttgcgacagacag 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||| ||| |  |     
T  4720 acgtgtgaaaaagacgcaagaacgtgaaacaggggatgctgtcaaagtgcagctcgcggggcgagtaagtttactcgttgtggcgagttgggacgggaaa 4819  T
Q  101 ctctacgggaacatgtcagtttcca-gccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattcta 194  Q
     |||||||||||||  |||||| ||  |||||| ||| |  ||||||| || | ||  |||||||||| |||||||| |||||||| ||||||||    
T  4820 atctacgggaacataccagttttcactccaaaagcccca-atttcatcaaccctaattccaaatttgaaaggaaactcaacctatgtttattcta 4913  T

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Target: scaffold0004 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 239 - 323
Target Start/End: Original strand, 385083 - 385167
Alignment:
Q  239 cttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaagtatgctaaaccaaaatcagaatt 323  Q
    ||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  385083 cttttcaatccaaaaatcatactccaaaaacctaatccccaattcccaatttcaactagaactatgctaaaccaaaatcagaatt 385167  T

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Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 66306 - 66243
Alignment:
Q  141 tttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaaca 205  Q
    ||||||| ||||||| ||||||||||| || |||||  ||||||||||||||||||  |||||||    
T  66306 tttcatcaactcaaatcccaaatttgatag-aaactctacctatgattattctacaacctgaaca 66243  T

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Target: scaffold0070 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 8932 - 9019
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||||| |||||||||||| |||||||||||||||  ||||||||| ||||||||||||||||||| ||||||||||||||||    
T  8932 cccaaatttgataggaaacttaacatatgattattctacaacctgaacatcaattcttaacacaattgccatggtttctacacttttc 9019  T

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Target: scaffold0151 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 141 - 246
Target Start/End: Original strand, 9920 - 10025
Alignment:
Q  141 tttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacact 240  Q
    ||||||| || |||| ||||| ||||| ||||||||||||||||||||||||||||  ||||||||| ||||||||||||||| | | ||||||||||||    
T  9920 tttcatctacccaaatcccaattttgataggaaacttaacctatgattattctacaacctgaacatcaattcttaacacaatttcgatggtttctacact 10019  T
Q  241 tttcaa 246  Q
    ||||||    
T  10020 tttcaa 10025  T

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Target: scaffold0364 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 8005 - 8092
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||||| ||||||||||||||||||||||||||||  ||||||||| |||||||| |||||||||| | ||||||||||||||    
T  8005 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcttaaaacaattgccatgatttctacacttttc 8092  T

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Target: scaffold0956 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 158 - 244
Target Start/End: Complemental strand, 2305 - 2219
Alignment:
Q  158 ccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    |||||||||| |||||||||||||| |||||||||||||  ||||||||| |||||||||||||||| || ||||||||||||||||    
T  2305 ccaaatttgataggaaacttaacctgtgattattctacaacctgaacatcaattcttaacacaattgtcatggtttctacacttttc 2219  T

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Target: scaffold1276 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 152 - 257
Target Start/End: Original strand, 976 - 1081
Alignment:
Q  152 caaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttcaatacaa 251  Q
    |||| ||||||||||| |||||||||||||||||||||| |||||  ||||||||| | ||||||||||||| | | ||||||||||||||||||| |||    
T  976 caaatcccaaatttgataggaaacttaacctatgattatcctacaacctgaacatcaactcttaacacaatttctatggtttctacacttttcaattcaa 1075  T
Q  252 gaatca 257  Q
     |||||    
T  1076 aaatca 1081  T

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Target: scaffold0117 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 42379 - 42444
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagt 66  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  42379 acgtatgaaaaagacgcaagaacgcgaaacagggaatgctgtcaaagtgcagctcgcgaggcgagt 42444  T

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Target: scaffold0117; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 257
Target Start/End: Original strand, 42514 - 42613
Alignment:
Q  158 ccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    |||||||||| |||||||| |||||| | ||||||||||| |||||| || ||||||||||| ||| | | ||||||||||||||||||| ||| |||||    
T  42514 ccaaatttgataggaaactcaacctaggtttattctacagcctgaacttcaattcttaacactatttcaatggtttctacacttttcaattcaaaaatca 42613  T

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Target: scaffold0293 (Bit Score: 57; Significance: 9e-24; HSPs: 2)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 141 - 257
Target Start/End: Complemental strand, 19526 - 19410
Alignment:
Q  141 tttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacact 240  Q
    ||||||| ||||| | ||||||||||| |||||||| ||| |||| ||||||||||| |||||| || ||||||||||||||| | | ||||||||||||    
T  19526 tttcatcaactcatatcccaaatttgataggaaactcaacttatgtttattctacagcctgaacttcaattcttaacacaatttcgatggtttctacact 19427  T
Q  241 tttcaatacaagaatca 257  Q
    ||||||| ||| |||||    
T  19426 tttcaattcaaaaatca 19410  T

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Target: scaffold0293; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 19621 - 19571
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19621 gtgaaaaagacgcaagaacgcgaaacagggaatgctgtcaaagtgcagctc 19571  T

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Target: scaffold0106 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 21820 - 21911
Alignment:
Q  152 caaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacactttt 243  Q
    |||| ||||||||||| ||||| ||||| ||||||||||||||||  ||||||||| ||| ||||||||||||||| |||||||||||||||    
T  21820 caaatcccaaatttgataggaagcttaatctatgattattctacaacctgaacatcaattgttaacacaattgccatggtttctacactttt 21911  T

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Target: scaffold0016 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 141 - 244
Target Start/End: Complemental strand, 174335 - 174232
Alignment:
Q  141 tttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacact 240  Q
    ||||||| || |||| | ||||||||| |||||||||||| |||||||||||||||  |||| |||| |||||||||||||||| || ||||||||||||    
T  174335 tttcatctacccaaatctcaaatttgataggaaacttaacatatgattattctacaacctgaccatcaattcttaacacaattgtcatggtttctacact 174236  T
Q  241 tttc 244  Q
    ||||    
T  174235 tttc 174232  T

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Target: scaffold0016; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 321
Target Start/End: Complemental strand, 182192 - 182092
Alignment:
Q  221 attgccacggtttctacacttttcaatacaagaa-tcatactccaaaaacctaacccccaattcccaatttcaactagaa-gtatgctaaaccaaaatca 318  Q
    ||||||| || |||||||||||| ||| ||| || ||||| ||  ||||||||||||||| |||||||||||||||||||  | ||||||||||||||||    
T  182192 attgccatggattctacactttttaattcaaaaaatcataatc--aaaacctaacccccacttcccaatttcaactagaacctttgctaaaccaaaatca 182095  T
Q  319 gaa 321  Q
    |||    
T  182094 gaa 182092  T

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Target: scaffold0877 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 2236 - 2151
Alignment:
Q  159 caaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||  ||||||||||||||||||||||||||||  |||||||||  |||||||||||||| ||| ||||||||||||||||    
T  2236 caaatttgttaggaaacttaacctatgattattctacaacctgaacatcagttcttaacacaattaccatggtttctacacttttc 2151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 152 - 257
Target Start/End: Original strand, 1961 - 2066
Alignment:
Q  152 caaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttcaatacaa 251  Q
    |||| ||||||||||| ||||||||||||||| ||||||||||||  || |||||| |||||||||||||||  ||  |||||||||||||||||| |||    
T  1961 caaatcccaaatttgataggaaacttaacctacgattattctacaacctaaacatcaattcttaacacaattagcatagtttctacacttttcaattcaa 2060  T
Q  252 gaatca 257  Q
     |||||    
T  2061 aaatca 2066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 916 - 1001
Alignment:
Q  159 caaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||  ||||||||||||||||||||||||||||  ||||||||| | ||||||||||||| ||| ||||||||||||||||    
T  916 caaatttgttaggaaacttaacctatgattattctacaacctgaacatcaactcttaacacaattaccatggtttctacacttttc 1001  T

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Target: scaffold0125 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 1259 - 1174
Alignment:
Q  159 caaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||  ||||||||||||||||||||||||||||  ||||||||| ||| ||||||||||| ||| ||||||||||||||||    
T  1259 caaatttgttaggaaacttaacctatgattattctacaacctgaacatcaatttttaacacaattaccatggtttctacacttttc 1174  T

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Target: scaffold0394 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 12891 - 12978
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||||  || |||||||||||||||||||||||||   |||||||| ||||||||||||||| ||| ||||||||||||||||    
T  12891 cccaaatttgttagaaaacttaacctatgattattctacaacatgaacatcaattcttaacacaattaccatggtttctacacttttc 12978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 7916 - 7875
Alignment:
Q  3 gtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtca 44  Q
    ||||||||||||||||||||||| |||||||||| |||||||    
T  7916 gtgtgaaaaagacgcaagaacgcaaaacaggggaagctgtca 7875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 72278 - 72365
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||||  || |||||||||||||||||||||||||  ||||||||| |||||||||||||||  || ||||||||||||||||    
T  72278 cccaaatttgttagaaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattatcatggtttctacacttttc 72365  T

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Target: scaffold0057; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 70081 - 70007
Alignment:
Q  141 tttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattctta 215  Q
    ||||||| || |||| ||||||||||| |||||||| |||||||  || |||||||| |||||| || |||||||    
T  70081 tttcatcaacccaaatcccaaatttgataggaaactcaacctattttttttctacagcctgaacttcaattctta 70007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 29563 - 29507
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgc 57  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  29563 acgtgtgacaaagacacaagaacgcgaaacaggggatgctgtcaaagtgcagctcgc 29507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 215
Target Start/End: Complemental strand, 29509 - 29370
Alignment:
Q  76 cgctgtggcgagttgcgacagacagctctacgggaacatgtcagtttccag-ccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaa 174  Q
    |||||||||||||||||||  |||  ||||||||||||   |||||| ||  |||||| ||| | ||| |||| || |||| ||||||||||| ||||||    
T  29509 cgctgtggcgagttgcgacgaacaaatctacgggaacagaccagtttgcactccaaaagccccaattt-catcaacccaaatcccaaatttgataggaaa 29411  T
Q  175 cttaacctatgattattctacagtctgaacatcgattctta 215  Q
    || |||||||| ||||||||||| |||||| || |||||||    
T  29410 ctcaacctatgtttattctacagcctgaacttcaattctta 29370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1439 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 917 - 1004
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||||  || |||||||||||||||||||||||||  ||||||||| |||||||||||||||  || | ||||||||||||||    
T  917 cccaaatttgttagaaaacttaacctatgattattctacaacctgaacatcaattcttaacacaattatcatgatttctacacttttc 1004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 244
Target Start/End: Complemental strand, 23322 - 23247
Alignment:
Q  169 aggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||||||||||||||||||||||   |||||||| ||||||||||||||| ||| |||||||||| |||||    
T  23322 aggaaacttaacctatgattattctacaacatgaacatcaattcttaacacaattaccatggtttctacatttttc 23247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 9833 - 9777
Alignment:
Q  9 aaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgag 65  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  9833 aaaagatgcaagaacgcgaaacaggggatgctgtcaatgtgcagctcgcaaggcgag 9777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 27279 - 27217
Alignment:
Q  3 gtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgag 65  Q
    |||| |||||||||||||||||| ||||||||||||||||||  |||||||| ||||||||||    
T  27279 gtgtaaaaaagacgcaagaacgcaaaacaggggatgctgtcattgtgcagcttgcgaggcgag 27217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 21946 - 22020
Alignment:
Q  141 tttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattctta 215  Q
    ||||||| || |||| ||||||||||| ||||||||||||||||||||||||||||  ||||||| | |||||||    
T  21946 tttcatctacccaaatcccaaatttgataggaaacttaacctatgattattctacaacctgaacaccaattctta 22020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 323
Target Start/End: Original strand, 36502 - 36559
Alignment:
Q  266 aaacctaacccccaattcccaatttcaactagaagtatgctaaaccaaaatcagaatt 323  Q
    |||||||| ||| ||||||||||||| || ||||  ||| ||||||||||||||||||    
T  36502 aaacctaaacccaaattcccaatttctaccagaaacatgttaaaccaaaatcagaatt 36559  T

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Target: scaffold0676 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 2638 - 2702
Alignment:
Q  141 tttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaaca 205  Q
    ||||||| ||||||| ||||||||||| |||||||||||| ||||||||||| ||| ||||||||    
T  2638 tttcatctactcaaatcccaaatttgataggaaacttaacgtatgattattcaacaatctgaaca 2702  T

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Target: scaffold0148 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 8621 - 8713
Alignment:
Q  97 acagctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgatta 189  Q
    ||||||||||||||| |    ||||| |||||||||||||||||||||| |||| |||| ||||||||||| || |||||  |||||||||||    
T  8621 acagctctacgggaagaaactagttttcagccaaaaacccaatttttcaaccacccaaatcccaaatttgatagaaaactctacctatgatta 8713  T

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Target: scaffold0090 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 321
Target Start/End: Complemental strand, 31580 - 31492
Alignment:
Q  232 ttctacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaa-gtatgctaaaccaaaatcagaa 321  Q
    ||||||||| || ||| ||| ||||||| ||  |||||||||||||||||||||||||||||||||||    |||||||||||||||||||    
T  31580 ttctacactctttaattcaaaaatcataatc--aaaacctaacccccaattcccaatttcaactagaacccttgctaaaccaaaatcagaa 31492  T

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Target: scaffold0023 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 163175 - 163262
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctacacttttc 244  Q
    ||||||||||| | | ||| | ||||||  ||||||||||  ||||||||| ||||||||||||||| ||| ||||||||||||||||    
T  163175 cccaaatttgataaggaacatcacctattgttattctacaacctgaacatcaattcttaacacaattaccatggtttctacacttttc 163262  T

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Target: scaffold0037 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 238
Target Start/End: Original strand, 82839 - 82920
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattcttaacacaattgccacggtttctaca 238  Q
    ||||||||||  || ||||||||| |||||||||||||||   |||||||| |||||||||||||||  || ||||||||||    
T  82839 cccaaatttgttagaaaacttaacgtatgattattctacaacttgaacatcaattcttaacacaattatcatggtttctaca 82920  T

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Target: scaffold0107 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 30594 - 30630
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    |||||||||||||||||||||||||||||||||||||    
T  30594 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 30630  T

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Target: scaffold0730 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 196
Target Start/End: Complemental strand, 6756 - 6677
Alignment:
Q  117 cagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctaca 196  Q
    |||||| ||||||||||| |||||||||| |||| |||| ||||||||||| || |||||  || |||||||| ||||||    
T  6756 cagttttcagccaaaaactcaatttttcaaccacccaaatcccaaatttgatagaaaactctacttatgattactctaca 6677  T

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Target: scaffold0205 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 207
Target Start/End: Complemental strand, 5888 - 5778
Alignment:
Q  96 gacagctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctac 195  Q
    |||||||||||||||| |   |||||| |||||||||||| || |||||| |||| |||| ||||||||  |  ||||||| |||||||| |||||||||    
T  5888 gacagctctacgggaagaaaccagttttcagccaaaaacctaa-ttttcaaccacccaaatcccaaattcaatgggaaactcaacctatgtttattctac 5790  T
Q  196 agtctgaacatc 207  Q
    |  |||||||||    
T  5789 aacctgaacatc 5778  T

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Target: scaffold0439 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 12081 - 12139
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaacatcgattctta 215  Q
    ||||||||||| ||||||| | ||||||||||||||||||  ||||||||| |||||||    
T  12081 cccaaatttgataggaaacatcacctatgattattctacaacctgaacatcaattctta 12139  T

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Target: scaffold0278 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 257
Target Start/End: Complemental strand, 23887 - 23829
Alignment:
Q  199 ctgaacatcgattcttaacacaattgccacggtttctacacttttcaatacaagaatca 257  Q
    ||||||||| ||||||||||||||| | | ||||||||||||||||||| ||| |||||    
T  23887 ctgaacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatca 23829  T

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Target: scaffold0014 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 189630 - 189713
Alignment:
Q  214 taacacaattgccacggtttctacacttttcaatacaagaatcatactccaaaaacctaacccccaattcccaatttcaactagaa 299  Q
    |||||| ||||||| ||||| |||||| |||||| ||| ||||||| ||  ||||||||||||||| || |||| |||||||||||    
T  189630 taacaccattgccatggtttgtacactcttcaattcaaaaatcataatc--aaaacctaacccccattttccaaattcaactagaa 189713  T

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Target: scaffold0315 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 18329 - 18365
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    ||||||||||||||||||||||||| |||||||||||    
T  18329 gtgaaaaagacgcaagaacgcgaaataggggatgctg 18365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 28593 - 28629
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    ||||||| |||||||||||||||||||||||||||||    
T  28593 gtgaaaaggacgcaagaacgcgaaacaggggatgctg 28629  T

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Target: scaffold0213; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 18958 - 18994
Alignment:
Q  160 aaatttgacaggaaacttaacctatgattattctaca 196  Q
    |||||||| |||||||||||| |||||||||||||||    
T  18958 aaatttgataggaaacttaacatatgattattctaca 18994  T

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Target: scaffold0076 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 38499 - 38535
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 41  Q
    ||||||||||||||||||||||||||||| |||||||    
T  38499 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 38535  T

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Target: scaffold0035 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 44031 - 43960
Alignment:
Q  124 cagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattattctaca 196  Q
    ||||||||||||||| |||||| |||| |||| ||||||||  | |||||||| |||||||| ||||||||||    
T  44031 cagccaaaaacccaa-ttttcaaccacccaaatcccaaattcaataggaaactcaacctatgtttattctaca 43960  T

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Target: scaffold0031 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 196
Target Start/End: Complemental strand, 127621 - 127518
Alignment:
Q  92 gacagacagctctacgggaacatgtcagtttccagccaaaaacccaatttttcatccactcaaaccccaaatttgacaggaaacttaacctatgattatt 191  Q
    ||||||||| |||||||||| |   | |||| ||||||||||||||| |||||| ||||  ||| ||||||||  | |||||||| |||||||| |||||    
T  127621 gacagacagttctacgggaagaaacctgttttcagccaaaaacccaa-ttttcaaccaccaaaatcccaaattcaaaaggaaactcaacctatgtttatt 127523  T
Q  192 ctaca 196  Q
    |||||    
T  127522 ctaca 127518  T

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Target: scaffold0231 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 18034 - 17983
Alignment:
Q  4 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    ||||||||||||||||||||  |||||||| ||||||||||  |||||||||    
T  18034 tgtgaaaaagacgcaagaacatgaaacaggagatgctgtcactgtgcagctc 17983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 20440 - 20397
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtca 44  Q
    |||||||||||| |||| |||||||||||||||| |||||||||    
T  20440 acgtgtgaaaaaaacgcgagaacgcgaaacagggtatgctgtca 20397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 11582 - 11528
Alignment:
Q  3 gtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgc 57  Q
    |||||| ||||||||||||||||||||||||| ||| |||||   ||||||||||    
T  11582 gtgtgacaaagacgcaagaacgcgaaacagggtatgttgtcactatgcagctcgc 11528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 202 - 256
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||||||||||||  |||||||  ||||||||||  |||||||||    
T  202 acgtgtgaaaaagacgcaagaacatgaaacagaagatgctgtcactgtgcagctc 256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 8506 - 8560
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||||||||||||  |||||| | ||||||||||  |||||||||    
T  8506 acgtgtgaaaaagacgcaagaacaagaaacatgagatgctgtcactgtgcagctc 8560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9867 - 9921
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||||||||||||  |||||||  ||||||||||  |||||||||    
T  9867 acgtgtgaaaaagacgcaagaacatgaaacagaagatgctgtcactgtgcagctc 9921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 21374 - 21428
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||||||||||||  |||||||  ||||||||||  |||||||||    
T  21374 acgtgtgaaaaagacgcaagaacatgaaacagaagatgctgtcactgtgcagctc 21428  T

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Target: scaffold0230 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 14573 - 14627
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||||||||||||  |||||||  ||||||||||  |||||||||    
T  14573 acgtgtgaaaaagacgcaagaacatgaaacagaagatgctgtcactgtgcagctc 14627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 196
Target Start/End: Complemental strand, 35697 - 35659
Alignment:
Q  158 ccaaatttgacaggaaacttaacctatgattattctaca 196  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  35697 ccaaatttgataggaaactaaacctatgattattctaca 35659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 10291 - 10241
Alignment:
Q  5 gtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctc 55  Q
    |||||||||||||||||||  |||||||| ||||||||||  |||||||||    
T  10291 gtgaaaaagacgcaagaacatgaaacaggagatgctgtcactgtgcagctc 10241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1354 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1354
Description:

Target: scaffold1354; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 266 - 233
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacaggg 34  Q
    |||||||||| |||||||||||||||||||||||    
T  266 acgtgtgaaacagacgcaagaacgcgaaacaggg 233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 21375 - 21428
Alignment:
Q  152 caaaccccaaatttgacaggaaacttaacctatgattattctacagtctgaaca 205  Q
    |||| ||||||||||| || |||||||| ||||||||||||||||  |||||||    
T  21375 caaatcccaaatttgatagaaaacttaaactatgattattctacaacctgaaca 21428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 11640 - 11608
Alignment:
Q  1 acgtgtgaaaaagacgcaagaacgcgaaacagg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  11640 acgtgtgaaaaagacgcaagaacgtgaaacagg 11608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 106373 - 106325
Alignment:
Q  157 cccaaatttgacaggaaacttaacctatgattattctacagtctgaaca 205  Q
    ||||||||||| ||||||||||||||| ||||||| ||||  |||||||    
T  106373 cccaaatttgataggaaacttaacctacgattattttacaacctgaaca 106325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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