View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11854_low_52 (Length: 321)

Name: NF11854_low_52
Description: NF11854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11854_low_52
NF11854_low_52
[»] chr6 (20 HSPs)
chr6 (163-306)||(32950557-32950700)
chr6 (17-139)||(22166384-22166507)
chr6 (17-139)||(15698813-15698936)
chr6 (17-128)||(22062340-22062451)
chr6 (17-139)||(20017063-20017186)
chr6 (17-139)||(15850817-15850939)
chr6 (17-139)||(20169501-20169623)
chr6 (17-139)||(22243070-22243193)
chr6 (17-139)||(24856079-24856202)
chr6 (17-139)||(22767950-22768076)
chr6 (17-139)||(25625025-25625148)
chr6 (17-139)||(18853273-18853395)
chr6 (17-139)||(18011124-18011248)
chr6 (17-139)||(21561261-21561385)
chr6 (17-136)||(29594963-29595083)
chr6 (17-131)||(18447484-18447596)
chr6 (17-139)||(30672560-30672680)
chr6 (17-139)||(25632182-25632302)
chr6 (91-139)||(11218884-11218932)
chr6 (87-139)||(18188478-18188530)
[»] chr3 (33 HSPs)
chr3 (17-139)||(6814127-6814249)
chr3 (17-139)||(10603307-10603429)
chr3 (17-139)||(13505342-13505464)
chr3 (17-139)||(11946672-11946795)
chr3 (17-139)||(7599612-7599735)
chr3 (17-132)||(9361804-9361919)
chr3 (17-139)||(22165146-22165269)
chr3 (17-139)||(12187910-12188033)
chr3 (17-139)||(12194324-12194447)
chr3 (24-139)||(16449576-16449692)
chr3 (17-139)||(15644346-15644469)
chr3 (17-139)||(10146268-10146392)
chr3 (17-139)||(15557780-15557903)
chr3 (17-139)||(13188252-13188375)
chr3 (17-139)||(16654987-16655110)
chr3 (17-139)||(37941636-37941759)
chr3 (17-139)||(4369947-4370070)
chr3 (17-139)||(10161007-10161134)
chr3 (17-139)||(16374312-16374438)
chr3 (19-139)||(13694159-13694280)
chr3 (17-131)||(12777355-12777470)
chr3 (17-139)||(13689914-13690037)
chr3 (17-139)||(12161028-12161148)
chr3 (28-139)||(10547718-10547827)
chr3 (17-119)||(13089643-13089746)
chr3 (17-119)||(13096975-13097078)
chr3 (17-121)||(1991999-1992100)
chr3 (91-139)||(3340114-3340162)
chr3 (87-139)||(11866054-11866106)
chr3 (92-139)||(13196349-13196396)
chr3 (17-139)||(17387020-17387139)
chr3 (91-139)||(15629866-15629914)
chr3 (91-135)||(15945892-15945936)
[»] chr4 (13 HSPs)
chr4 (17-139)||(11497449-11497571)
chr4 (17-139)||(15253605-15253727)
chr4 (17-139)||(42710568-42710690)
chr4 (17-139)||(13822171-13822294)
chr4 (17-139)||(22110216-22110339)
chr4 (17-139)||(38426000-38426123)
chr4 (17-131)||(18082293-18082409)
chr4 (17-139)||(15348649-15348771)
chr4 (17-139)||(18291274-18291394)
chr4 (17-139)||(10630003-10630126)
chr4 (17-132)||(3353913-3354030)
chr4 (29-136)||(17485749-17485854)
chr4 (91-139)||(15864766-15864814)
[»] chr2 (14 HSPs)
chr2 (17-139)||(12450-12572)
chr2 (17-137)||(116803-116923)
chr2 (17-139)||(25356768-25356891)
chr2 (24-139)||(22664343-22664459)
chr2 (17-139)||(22045495-22045618)
chr2 (17-139)||(24796119-24796242)
chr2 (17-139)||(16774907-16775031)
chr2 (17-139)||(17589664-17589788)
chr2 (17-139)||(27626850-27626966)
chr2 (17-139)||(25145599-25145722)
chr2 (19-136)||(24517157-24517275)
chr2 (17-131)||(24820854-24820971)
chr2 (86-139)||(25371860-25371913)
chr2 (28-139)||(25366602-25366710)
[»] scaffold0230 (1 HSPs)
scaffold0230 (17-139)||(12744-12866)
[»] chr8 (16 HSPs)
chr8 (17-139)||(21955332-21955454)
chr8 (17-139)||(21381349-21381472)
chr8 (17-139)||(21099626-21099748)
chr8 (17-139)||(23910697-23910820)
chr8 (17-139)||(8313724-8313847)
chr8 (17-139)||(8323683-8323809)
chr8 (17-139)||(17619998-17620121)
chr8 (17-139)||(20039823-20039946)
chr8 (17-139)||(21854614-21854737)
chr8 (17-139)||(21942274-21942395)
chr8 (12-139)||(19365288-19365415)
chr8 (19-136)||(20711727-20711845)
chr8 (17-139)||(16419444-16419567)
chr8 (91-139)||(22369222-22369270)
chr8 (29-139)||(20375071-20375181)
chr8 (91-139)||(19766808-19766856)
[»] chr7 (23 HSPs)
chr7 (17-139)||(23514325-23514447)
chr7 (17-139)||(9582171-9582293)
chr7 (17-139)||(14550354-14550476)
chr7 (17-139)||(8717122-8717245)
chr7 (17-139)||(13673113-13673236)
chr7 (17-139)||(18594101-18594224)
chr7 (17-139)||(18617460-18617583)
chr7 (17-139)||(16150317-16150441)
chr7 (17-139)||(539594-539716)
chr7 (17-139)||(10432577-10432699)
chr7 (17-139)||(13657180-13657303)
chr7 (17-139)||(16466451-16466573)
chr7 (17-136)||(11927744-11927863)
chr7 (22-139)||(16531364-16531479)
chr7 (22-139)||(16634183-16634298)
chr7 (19-139)||(12566278-12566396)
chr7 (29-139)||(13355496-13355604)
chr7 (28-139)||(48802699-48802807)
chr7 (19-139)||(4311998-4312116)
chr7 (17-131)||(20107558-20107670)
chr7 (91-139)||(824903-824951)
chr7 (91-139)||(15207471-15207519)
chr7 (91-139)||(15917668-15917716)
[»] chr5 (17 HSPs)
chr5 (17-139)||(23711512-23711634)
chr5 (17-128)||(20791551-20791662)
chr5 (17-139)||(15734791-15734914)
chr5 (17-139)||(20596664-20596787)
chr5 (17-139)||(20602950-20603073)
chr5 (17-139)||(20609241-20609364)
chr5 (17-132)||(24939793-24939908)
chr5 (17-139)||(18072157-18072280)
chr5 (17-139)||(20621419-20621542)
chr5 (17-139)||(23747307-23747430)
chr5 (17-139)||(24954008-24954132)
chr5 (17-139)||(20445664-20445788)
chr5 (17-139)||(24219091-24219213)
chr5 (17-139)||(23601478-23601601)
chr5 (87-139)||(21281816-21281868)
chr5 (17-139)||(20574720-20574839)
chr5 (91-139)||(22854836-22854884)
[»] chr1 (5 HSPs)
chr1 (17-139)||(27046132-27046254)
chr1 (17-132)||(20236732-20236847)
chr1 (17-139)||(21799498-21799621)
chr1 (17-139)||(17095437-17095560)
chr1 (17-139)||(3989352-3989475)
[»] scaffold0029 (1 HSPs)
scaffold0029 (17-139)||(122627-122749)
[»] scaffold0022 (1 HSPs)
scaffold0022 (17-132)||(24851-24966)
[»] scaffold0127 (1 HSPs)
scaffold0127 (17-139)||(22-146)
[»] scaffold0404 (1 HSPs)
scaffold0404 (17-139)||(295-419)
[»] scaffold0215 (1 HSPs)
scaffold0215 (57-132)||(7843-7918)
[»] scaffold0004 (3 HSPs)
scaffold0004 (17-141)||(252703-252828)
scaffold0004 (17-139)||(355329-355453)
scaffold0004 (91-139)||(18872-18920)
[»] scaffold0035 (1 HSPs)
scaffold0035 (17-139)||(51327-51450)
[»] scaffold0020 (2 HSPs)
scaffold0020 (17-139)||(115904-116027)
scaffold0020 (17-139)||(120208-120331)
[»] scaffold0346 (1 HSPs)
scaffold0346 (17-136)||(4445-4565)
[»] scaffold0974 (1 HSPs)
scaffold0974 (17-139)||(371-493)
[»] scaffold0679 (1 HSPs)
scaffold0679 (17-139)||(7269-7391)
[»] scaffold0206 (1 HSPs)
scaffold0206 (17-139)||(17379-17502)
[»] scaffold0037 (2 HSPs)
scaffold0037 (17-131)||(44715-44830)
scaffold0037 (17-131)||(52104-52219)
[»] scaffold0032 (1 HSPs)
scaffold0032 (28-139)||(90533-90642)
[»] scaffold0216 (1 HSPs)
scaffold0216 (17-139)||(10678-10798)
[»] scaffold0374 (1 HSPs)
scaffold0374 (17-139)||(9449-9574)
[»] scaffold0034 (1 HSPs)
scaffold0034 (17-139)||(59455-59578)
[»] scaffold0220 (1 HSPs)
scaffold0220 (17-139)||(9155-9275)
[»] scaffold0156 (1 HSPs)
scaffold0156 (17-139)||(101-222)
[»] scaffold1941 (1 HSPs)
scaffold1941 (19-136)||(1075-1193)
[»] scaffold0328 (1 HSPs)
scaffold0328 (17-139)||(1075-1195)
[»] scaffold0162 (1 HSPs)
scaffold0162 (19-136)||(35940-36058)
[»] scaffold0018 (1 HSPs)
scaffold0018 (17-131)||(19020-19137)
[»] scaffold0402 (1 HSPs)
scaffold0402 (28-139)||(7055-7164)
[»] scaffold0026 (1 HSPs)
scaffold0026 (17-139)||(10416-10532)
[»] scaffold0059 (1 HSPs)
scaffold0059 (17-139)||(11651-11770)
[»] scaffold0013 (1 HSPs)
scaffold0013 (17-139)||(233628-233747)
[»] scaffold0278 (2 HSPs)
scaffold0278 (17-137)||(13882-13999)
scaffold0278 (17-137)||(17216-17333)
[»] scaffold0566 (1 HSPs)
scaffold0566 (91-139)||(1874-1922)
[»] scaffold0375 (1 HSPs)
scaffold0375 (91-139)||(11792-11840)
[»] scaffold0384 (1 HSPs)
scaffold0384 (91-139)||(9841-9889)


Alignment Details
Target: chr6 (Bit Score: 144; Significance: 1e-75; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 163 - 306
Target Start/End: Complemental strand, 32950700 - 32950557
Alignment:
Q  163 aagcggaaagctaaagacagaatgcagaaagctgaagaccgaaagcagaaagctaagataatgaagttcgaaagaagccagccacccaggatcgctaagg 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32950700 aagcggaaagctaaagacagaatgcagaaagctgaagaccgaaagcagaaagctaagataatgaagttcgaaagaagccagccacccaggatcgctaagg 32950601  T
Q  263 cagcttaagtttaaaagcagttggaggcttaagatgaagaaaat 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  32950600 cagcttaagtttaaaagcagttggaggcttaagatgaagaaaat 32950557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 22166384 - 22166507
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22166384 acaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatattttcaataaaaattagctacttaaccat 22166483  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||||||||    
T  22166484 gccttttacaataaaacaaaacaa 22166507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 15698936 - 15698813
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaa-ttagctacttaaccat 115  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  15698936 acaagagtttgctttgatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaatttagctacttgaccat 15698837  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    |||||||||||||||||| |||||    
T  15698836 gccttttacaataaaacacaacaa 15698813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 22062340 - 22062451
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22062340 acaagagtttactttcatgtacaagaatcaaccaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 22062439  T
Q  117 ccttttacaata 128  Q
    ||||||||||||    
T  22062440 ccttttacaata 22062451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 20017063 - 20017186
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    ||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  20017063 acaagagtttgcttttatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatgttttcaataaaaagtagctacttaaccat 20017162  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||||||||    
T  20017163 gccttttacaataaaacaaaacaa 20017186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 15850817 - 15850939
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||| ||||||||    
T  15850817 acaagagtttgctttcatgtacaagaatcaa-caaataagaggagacaatggaaatttttgtatcatgatattttcaataaaaattagctatttaaccat 15850915  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||| ||||||||||||||||    
T  15850916 gccttttgcaataaaacaaaacaa 15850939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 20169623 - 20169501
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaa-taagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||| ||    
T  20169623 acaagagtttgctttcatgtacaagaatcaatcaaaataagaggagacaatgaaaatttt-tgtcttgattttttcaataaaaattagctacttaactat 20169525  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    |||||||||||||||||| |||||    
T  20169524 gccttttacaataaaacagaacaa 20169501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 22243193 - 22243070
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||    
T  22243193 acaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcacgatattttcaataaaaattagctacttaaacat 22243094  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    |||||| |||||||||| ||||||    
T  22243093 gcctttcacaataaaacgaaacaa 22243070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 24856079 - 24856202
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    ||||||||||||||| |||||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||    
T  24856079 acaagagtttgcttttatgtacaagaatcaacaaaataagaggagacaatgaaaaattttgtgtcatgatgttttcaataaaaattagctacttaactat 24856178  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||| |||||||| |||||    
T  24856179 gccttttaccataaaacagaacaa 24856202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 22767950 - 22768076
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatga---tattttcaataaaaattagctacttaac 112  Q
    |||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||||||||||||   | ||||||||||||||||||||||||||    
T  22767950 acaagagtttgctttcatgtacaagagtcaacaaaataagaggagacaatgaaaatttttgtgtcatgatttttttttcaataaaaattagctacttaac 22768049  T
Q  113 catgccttttacaataaaacaaaacaa 139  Q
     |||||||||||||||||||| |||||    
T  22768050 tatgccttttacaataaaacagaacaa 22768076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 25625148 - 25625025
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatatttt-caataaaaattagctacttaaccat 115  Q
    |||||||||| ||||||||||||||||  || ||| |||||||||||||| |||| ||| |||||||||||||| |||||||||| ||||||||||||||    
T  25625148 acaagagtttactttcatgtacaagaaataaccaattaagaggagacaataaaaaatttatgtcatgatatttttcaataaaaataagctacttaaccat 25625049  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    |||||| |||||||||||||||||    
T  25625048 gcctttcacaataaaacaaaacaa 25625025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 18853395 - 18853273
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaataaaaattagctacttaaccat 115  Q
    |||||||||| ||||||||||||||||  || ||| |||||||||||||| |||| ||| |||||||||| |||||||||||||  |||||||||| |||    
T  18853395 acaagagtttactttcatgtacaagaaataaccaattaagaggagacaat-aaaaatttatgtcatgatatttttcaataaaaacaagctacttaatcat 18853297  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    | |||| |||||||||||||||||    
T  18853296 gtctttcacaataaaacaaaacaa 18853273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 18011248 - 18011124
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatat-tttcaataaaaattagctacttaacca 114  Q
    |||||||||| |||||||||||||||| | | ||| |||||||||||||| |||| |||| ||||||||| | ||||| ||||||  || || |||||||    
T  18011248 acaagagtttactttcatgtacaagaaacgaccaactaagaggagacaataaaaaattttatgtcatgatttatttcattaaaaacaagatagttaacca 18011149  T
Q  115 tgccttttacaataaaacaaaacaa 139  Q
    |||||||||||||||||||||||||    
T  18011148 tgccttttacaataaaacaaaacaa 18011124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 21561261 - 21561385
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaa-tgaaaattttgtgtcatgatatttt-caataaaaattagctacttaacca 114  Q
    ||||||||||  |||||||||||||||  || ||| ||||||||||||| | |||| ||| |||||||||||||| |||||||||  |||||||||| ||    
T  21561261 acaagagtttattttcatgtacaagaaataaccaattaagaggagacaaataaaaaatttatgtcatgatatttttcaataaaaacaagctacttaatca 21561360  T
Q  115 tgccttttacaataaaacaaaacaa 139  Q
    || |||| |||||||||||||||||    
T  21561361 tgtctttcacaataaaacaaaacaa 21561385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 136
Target Start/End: Complemental strand, 29595083 - 29594963
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatat-tttcaataaaaattagctacttaaccat 115  Q
    |||||||||  |||||||||||||||| ||| ||| |||||||||||||  |||||||| || |||| | | ||||| ||||||  ||||||||||||||    
T  29595083 acaagagttcactttcatgtacaagaaacaaccaactaagaggagacaaaaaaaattttatgccatgctttatttcattaaaaacaagctacttaaccat 29594984  T
Q  116 gccttttacaataaaacaaaa 136  Q
    |||||| |||| |||||||||    
T  29594983 gcctttcacaagaaaacaaaa 29594963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 131
Target Start/End: Complemental strand, 18447596 - 18447484
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    |||||||||| |||||||||||||||| ||| | ||||| | || | ||  |||| ||| ||||||||| |||||||||||||  |||||||||| ||||    
T  18447596 acaagagtttactttcatgtacaagaaacaa-ccaataaaaagaaaaaaataaaaatttatgtcatgat-ttttcaataaaaacaagctacttaatcatg 18447499  T
Q  117 ccttttacaataaaa 131  Q
    |||||||||||||||    
T  18447498 ccttttacaataaaa 18447484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 30672560 - 30672680
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    |||||||||| |||||||||||||||| ||| ||| | |||||||||||  |||| ||| ||||||   ||| ||||||||||  |||||||||| ||||    
T  30672560 acaagagtttactttcatgtacaagaaacaaccaatttagaggagacaactaaaaatttatgtcat--aattctcaataaaaacaagctacttaatcatg 30672657  T
Q  117 ccttttacaataaaacaaaacaa 139  Q
     ||||  |||| |||||||||||    
T  30672658 tctttcgcaattaaacaaaacaa 30672680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 25632182 - 25632302
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    |||||||||  |||||||||||||||| ||| ||| | |||||||||||  |||| ||| |||||| || ||| |||||||||  || ||||||| ||||    
T  25632182 acaagagttcactttcatgtacaagaaacaaccaatttagaggagacaa-caaaaatttatgtcataat-tttacaataaaaacaagttacttaatcatg 25632279  T
Q  117 ccttttacaataaaacaaaacaa 139  Q
    ||||| ||||||||| |||||||    
T  25632280 cctttcacaataaaataaaacaa 25632302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 11218932 - 11218884
Alignment:
Q  91 caataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 139  Q
    |||||||||  ||||| |||  |||||||||||||||||||||||||||    
T  11218932 caataaaaacaagctatttattcatgccttttacaataaaacaaaacaa 11218884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 18188478 - 18188530
Alignment:
Q  87 ttttcaataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 139  Q
    |||||||||||||  |||||||||| |||| |||| |||||||||||| ||||    
T  18188478 ttttcaataaaaacaagctacttaatcatgtctttcacaataaaacaacacaa 18188530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 123; Significance: 4e-63; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 6814249 - 6814127
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6814249 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 6814150  T
Q  117 ccttttacaataaaacaaaacaa 139  Q
    |||||||||||||||||||||||    
T  6814149 ccttttacaataaaacaaaacaa 6814127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 10603307 - 10603429
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10603307 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 10603406  T
Q  117 ccttttacaataaaacaaaacaa 139  Q
    |||||||||||||||||||||||    
T  10603407 ccttttacaataaaacaaaacaa 10603429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 13505342 - 13505464
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13505342 acaagagtttgcttttatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 13505441  T
Q  117 ccttttacaataaaacaaaacaa 139  Q
    |||||||||||||||||||||||    
T  13505442 ccttttacaataaaacaaaacaa 13505464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 11946795 - 11946672
Alignment:
Q  17 acaagagtttgcttt-catgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11946795 acaagagtttgcttttcatgtataagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccat 11946696  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||||||||    
T  11946695 gccttttacaataaaacaaaacaa 11946672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 7599735 - 7599612
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7599735 acaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatattttcaataaaaattagctacttaaccat 7599636  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||||||||    
T  7599635 gccttttacaataaaacaaaacaa 7599612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 9361804 - 9361919
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9361804 acaagagtttgctttcatgtacaagaatcaaccaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 9361903  T
Q  117 ccttttacaataaaac 132  Q
     |||||||||||||||    
T  9361904 tcttttacaataaaac 9361919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 22165146 - 22165269
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22165146 acaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatattttcaataaaaattagctacttaaccat 22165245  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||||||||    
T  22165246 gccttttacaataaaacaaaacaa 22165269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 12187910 - 12188033
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  12187910 acaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaaattttgtgtcatgatatttttaataaaaattagctacttaaccat 12188009  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    |||||||||||||||||| |||||    
T  12188010 gccttttacaataaaacagaacaa 12188033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 12194324 - 12194447
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  12194324 acaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatatttttaataaaaattagctacttaaccat 12194423  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    |||||||||||||||||| |||||    
T  12194424 gccttttacaataaaacagaacaa 12194447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 16449576 - 16449692
Alignment:
Q  24 tttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttg-tgtcatgatattttcaataaaaattagctacttaaccatgcctttt 122  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  16449576 tttgctttcatgtacaagaatcaatcgaataggaggagacaatgaaaatttttatgtcatgatattttcaataaaaattagctacttaaccatgcctttt 16449675  T
Q  123 acaataaaacaaaacaa 139  Q
    |||||||||||||||||    
T  16449676 acaataaaacaaaacaa 16449692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 15644469 - 15644346
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    |||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||    
T  15644469 acaagagtttgctttcgtgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatgttttcaataaaaattagctacttaatcat 15644370  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||||||||    
T  15644369 gccttttacaataaaacaaaacaa 15644346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 10146392 - 10146268
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaa-taagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaacca 114  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||| |    
T  10146392 acaagagtttgctttcatgtacaagaatcaatcaaaataagaggagacaatgaaaatttttgtgtcttgattttttcaataaaaattagctacttaacta 10146293  T
Q  115 tgccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||| |||||    
T  10146292 tgccttttacaataaaacagaacaa 10146268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 15557780 - 15557903
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||    
T  15557780 acaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcacgatattttcaataaaaattagctacttaaacat 15557879  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    |||||| |||||||||| ||||||    
T  15557880 gcctttcacaataaaacgaaacaa 15557903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 13188252 - 13188375
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    |||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||| ||    
T  13188252 acaagaatttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgattttttcaataaaaattaactacttaactat 13188351  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    |||||||||||||||||| |||||    
T  13188352 gccttttacaataaaacagaacaa 13188375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 16655110 - 16654987
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    |||||| |||||||| |||||||||||||||  |||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||| ||    
T  16655110 acaagaatttgcttttatgtacaagaatcaacaaaataagaggagacaatgaaaaattttgtgtcatgatttttttaataaaaattagctacttaactat 16655011  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||||||||    
T  16655010 gccttttacaataaaacaaaacaa 16654987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 37941759 - 37941636
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||| |||    
T  37941759 acaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaattttttgtgtcatgatatttttaataaaaattagctacttaaacat 37941660  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    |||||| |||||||||| ||||||    
T  37941659 gcctttcacaataaaacgaaacaa 37941636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 4370070 - 4369947
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaataaaaattagctacttaaccat 115  Q
    |||||||||| ||||||||||||||||| || ||| |||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  4370070 acaagagtttactttcatgtacaagaattaaccaattaagaggagacaataaaaattttgtgtcatgatatttttcaataaaaataagctacttaaccat 4369971  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    |||||| ||||||||||| |||||    
T  4369970 gcctttcacaataaaacagaacaa 4369947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 10161007 - 10161134
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatatt----ttcaataaaaattagctacttaa 111  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||| |||| ||    |||||||||||||||||||||||    
T  10161007 acaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcttgatttttttcttcaataaaaattagctacttaa 10161106  T
Q  112 ccatgccttttacaataaaacaaaacaa 139  Q
    | |||||||||||||||||||| |||||    
T  10161107 ctatgccttttacaataaaacagaacaa 10161134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 16374312 - 16374438
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgt--gtcatgatattttc--aataaaaattagctacttaac 112  Q
    |||||||||||||||||||||||||||| ||  |||||||||||||||||||| ||||| |  |||||||| ||||   |||||||||||||||||||||    
T  16374312 acaagagtttgctttcatgtacaagaataaacaaaataagaggagacaatgaagattttttttgtcatgatttttttttaataaaaattagctacttaac 16374411  T
Q  113 catgccttttacaataaaacaaaacaa 139  Q
     ||||||||||||||||||||||||||    
T  16374412 tatgccttttacaataaaacaaaacaa 16374438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 13694280 - 13694159
Alignment:
Q  19 aagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatat-tttcaataaaaattagctacttaaccatgc 117  Q
    |||||||  |||||||||||||||| | | ||| |||||||||||||| |||||||| ||||||||| | ||||| ||||||  ||||||||||||||||    
T  13694280 aagagttcactttcatgtacaagaaacgaccaactaagaggagacaataaaaattttatgtcatgatttatttcattaaaaacaagctacttaaccatgc 13694181  T
Q  118 cttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||||||    
T  13694180 cttttacaataaaacaaaacaa 13694159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 12777355 - 12777470
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaataaaaattagctacttaaccat 115  Q
    |||||||||| ||||||||||||||||| || ||| ||||| |||||||| |||| ||| |||||||||| |||||||||||||| ||||||||||||||    
T  12777355 acaagagtttactttcatgtacaagaattaaccaattaagatgagacaataaaaaatttatgtcatgatatttttcaataaaaataagctacttaaccat 12777454  T
Q  116 gccttttacaataaaa 131  Q
    || ||| |||||||||    
T  12777455 gcttttcacaataaaa 12777470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 13690037 - 13689914
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatat-tttcaataaaaattagctacttaaccat 115  Q
    |||||||||  |||||||||||||||| | | ||| |||||||||||||| |||||| | ||||||||| | ||||| ||||||  ||||||||||||||    
T  13690037 acaagagttcactttcatgtacaagaaacgaccaactaagaggagacaataaaaattatatgtcatgatttatttcattaaaaacaagctacttaaccat 13689938  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||||||||    
T  13689937 gccttttacaataaaacaaaacaa 13689914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 12161028 - 12161148
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    |||||||||| |||||||||||||||| | | ||| |||||||||||||| |||| ||| ||||||||| |||||||||||||  |||||||||  ||||    
T  12161028 acaagagtttactttcatgtacaagaaacgaccaa-taagaggagacaataaaaaatttatgtcatgat-ttttcaataaaaacaagctacttagtcatg 12161125  T
Q  117 ccttttacaataaaacaaaacaa 139  Q
    ||||| |||||||||||||||||    
T  12161126 cctttcacaataaaacaaaacaa 12161148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 10547718 - 10547827
Alignment:
Q  28 ctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatgccttttacaat 127  Q
    |||||||||||||||| ||| | | |||||||||||||| |||||||| ||||||||| || ||||||||||  |||||||||| |||| |||| |||||    
T  10547718 ctttcatgtacaagaaacaa-ctagtaagaggagacaataaaaattttatgtcatgat-ttctcaataaaaacaagctacttaatcatgtctttcacaat 10547815  T
Q  128 aaaacaaaacaa 139  Q
    ||||||||||||    
T  10547816 aaaacaaaacaa 10547827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 13089643 - 13089746
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaataaaaattagctacttaaccat 115  Q
    |||||||||  ||||||||||||||||  || ||| |||||||||||||| |||| ||| |||||||||| |||||||||||||  ||||||||||||||    
T  13089643 acaagagttcactttcatgtacaagaaataaccaattaagaggagacaataaaaaatttatgtcatgatagttttcaataaaaacaagctacttaaccat 13089742  T
Q  116 gcct 119  Q
    ||||    
T  13089743 gcct 13089746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 13097078 - 13096975
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaataaaaattagctacttaaccat 115  Q
    |||||||||  ||||||||||||||||  || ||| |||||||||||||| |||| ||| |||||||||| |||||||||||||  ||||||||||||||    
T  13097078 acaagagttcactttcatgtacaagaaataaccaattaagaggagacaataaaaaatttatgtcatgatatttttcaataaaaaaaagctacttaaccat 13096979  T
Q  116 gcct 119  Q
    ||||    
T  13096978 gcct 13096975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 1992100 - 1991999
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    |||||||||  |||||||||||||||| ||| ||| | |||||||||||  |||| ||| ||||||   ||||||||||||||  |||||||||| ||||    
T  1992100 acaagagttcactttcatgtacaagaaacaaccaatttagaggagacaa-caaaaatttatgtcat--aattttcaataaaaacaagctacttaatcatg 1992004  T
Q  117 ccttt 121  Q
    |||||    
T  1992003 ccttt 1991999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 3340114 - 3340162
Alignment:
Q  91 caataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 139  Q
    |||||||||  |||| ||||| |||||||||||||||||||||||||||    
T  3340114 caataaaaacaagctgcttaatcatgccttttacaataaaacaaaacaa 3340162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 11866106 - 11866054
Alignment:
Q  87 ttttcaataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 139  Q
    |||||||||||||  || ||||||| ||||||||| |||||||||||||||||    
T  11866106 ttttcaataaaaaagaggtacttaatcatgcctttcacaataaaacaaaacaa 11866054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 13196349 - 13196396
Alignment:
Q  92 aataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 139  Q
    ||||||||  |||||||||  |||||||||||||||||||||||||||    
T  13196349 aataaaaagaagctacttattcatgccttttacaataaaacaaaacaa 13196396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 17387139 - 17387020
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    |||||||||  |||||||||||||||| ||| ||| | |||||| ||||  |||||||  |||||| ||  ||||||||||||  |||||||||| ||||    
T  17387139 acaagagttcactttcatgtacaagaaacaaccaatttagaggatacaacaaaaattta-tgtcataat--tttcaataaaaacaagctacttaatcatg 17387043  T
Q  117 ccttttacaataaaacaaaacaa 139  Q
     ||||  |||| |||||||||||    
T  17387042 tctttctcaattaaacaaaacaa 17387020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 15629866 - 15629914
Alignment:
Q  91 caataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 139  Q
    |||||||||  |||| ||||| ||||||||||||||| |||||||||||    
T  15629866 caataaaaacgagctgcttaatcatgccttttacaatgaaacaaaacaa 15629914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 15945936 - 15945892
Alignment:
Q  91 caataaaaattagctacttaaccatgccttttacaataaaacaaa 135  Q
    |||||||||| |||| ||||  |||||||||||||||||||||||    
T  15945936 caataaaaataagctgcttattcatgccttttacaataaaacaaa 15945892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 9e-61; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 11497449 - 11497571
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11497449 acaagagtttgctttcatgtacaagaatcaaccaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 11497548  T
Q  117 ccttttacaataaaacaaaacaa 139  Q
    |||||||||||||||||||||||    
T  11497549 ccttttacaataaaacaaaacaa 11497571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 15253727 - 15253605
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15253727 acaagagtttgctttcatgtacaagaatcaaccaaataagaggagacaattaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 15253628  T
Q  117 ccttttacaataaaacaaaacaa 139  Q
    |||||||||||||||||||||||    
T  15253627 ccttttacaataaaacaaaacaa 15253605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 42710568 - 42710690
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  42710568 acaagagtttgcttttatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgccatgatattttcaataaaaattagctacttaaccatg 42710667  T
Q  117 ccttttacaataaaacaaaacaa 139  Q
    |||||||||||||||||||||||    
T  42710668 ccttttacaataaaacaaaacaa 42710690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 13822294 - 13822171
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13822294 acaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatattttcaataaaaattagctacttaaccat 13822195  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||||||||    
T  13822194 gccttttacaataaaacaaaacaa 13822171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 22110339 - 22110216
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    ||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  22110339 acaagagtttgcttttatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatgttttcaataaaaattagctacttaaccat 22110240  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||||||||    
T  22110239 gccttttacaataaaacaaaacaa 22110216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 38426123 - 38426000
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaataaaaattagctacttaaccat 115  Q
    |||||||||| ||||||| ||||||||  || ||| |||||||||||||| |||| ||| |||||||||| |||||||||||||  ||||||||||||||    
T  38426123 acaagagtttactttcatatacaagaaataaccaattaagaggagacaataaaaaatttatgtcatgatatttttcaataaaaacaagctacttaaccat 38426024  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    |||||| ||||||||||| |||||    
T  38426023 gcctttcacaataaaacagaacaa 38426000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 18082293 - 18082409
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaataaaaa-ttagctacttaacca 114  Q
    |||||||||| |||||||||||| |||| || ||| |||||||||||||| |||| ||| |||||||||| |||||||||||||   |||||||||||||    
T  18082293 acaagagtttactttcatgtacaggaattaaccaattaagaggagacaataaaaaatttatgtcatgatatttttcaataaaaacaaagctacttaacca 18082392  T
Q  115 tgccttttacaataaaa 131  Q
    |||||||||||||||||    
T  18082393 tgccttttacaataaaa 18082409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 15348649 - 15348771
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaataaaaattagctacttaaccat 115  Q
    |||||||||| ||||||||||||||||  || ||| |||||||||||||| |||| ||| |||||||||| ||||||| |||||  |||||||||| |||    
T  15348649 acaagagtttactttcatgtacaagaaataaccaattaagaggagacaat-aaaaatttatgtcatgatatttttcaacaaaaagaagctacttaatcat 15348747  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    |||||| |||||||||||||||||    
T  15348748 gcctttcacaataaaacaaaacaa 15348771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 18291394 - 18291274
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    |||||||||| |||||||||||||||| ||| ||| | |||||||| ||| |||||||  ||||||||| |||||||||||||  |||||||||| ||||    
T  18291394 acaagagtttactttcatgtacaagaaacaaccaatttagaggagataataaaaattta-tgtcatgat-ttttcaataaaaacaagctacttaatcatg 18291297  T
Q  117 ccttttacaataaaacaaaacaa 139  Q
    ||||| |||||||||||||||||    
T  18291296 cctttcacaataaaacaaaacaa 18291274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 10630126 - 10630003
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgat-attttcaataaaaattagctacttaaccat 115  Q
    |||||||||  ||||||||||||||||  || ||| |||||||||||||| |||| ||| |||||||||  |||||||||||||  ||||||||||||||    
T  10630126 acaagagttcactttcatgtacaagaaataaccaattaagaggagacaataaaaaatttatgtcatgatgtttttcaataaaaacaagctacttaaccat 10630027  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    | |||| ||||||||||| |||||    
T  10630026 gtctttcacaataaaacagaacaa 10630003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 3354030 - 3353913
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaat-tttgtgtcatgatatttt-caataaaaattagctacttaacca 114  Q
    ||||||||||  |||||||||||||||  || ||| ||||||||||| || ||||  ||| |||||||||||||| |||||||||  |||||||||||||    
T  3354030 acaagagtttattttcatgtacaagaaataaccaattaagaggagacgataaaaaaatttatgtcatgatatttttcaataaaaacaagctacttaacca 3353931  T
Q  115 tgccttttacaataaaac 132  Q
    ||||||| ||||||||||    
T  3353930 tgcctttcacaataaaac 3353913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 17485749 - 17485854
Alignment:
Q  29 tttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatgccttttacaata 128  Q
    ||||||||||||||| |||  || | |||||||||||  |||||||  |||||| || |||||||||||||  ||||| |||| ||||||||| ||||||    
T  17485749 tttcatgtacaagaaacaactaatttagaggagacaacaaaaattta-tgtcataat-ttttcaataaaaacaagctatttaatcatgcctttcacaata 17485846  T
Q  129 aaacaaaa 136  Q
    ||||||||    
T  17485847 aaacaaaa 17485854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 15864814 - 15864766
Alignment:
Q  91 caataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 139  Q
    |||||||||  |||| ||||  |||||||||||||||||||||||||||    
T  15864814 caataaaaacaagctgcttattcatgccttttacaataaaacaaaacaa 15864766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 119; Significance: 9e-61; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 12450 - 12572
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12450 acaagagtttgctttcatgtacaagaatcaaccaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 12549  T
Q  117 ccttttacaataaaacaaaacaa 139  Q
    |||||||||||||||||||||||    
T  12550 ccttttacaataaaacaaaacaa 12572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 116923 - 116803
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    ||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  116923 acaagagtttgcttttatgtacaataatcaaccaaataagaggagacaatgaaaattttatgtcatgatattttcaataaaaattagctacttaaccatg 116824  T
Q  117 ccttttacaataaaacaaaac 137  Q
    |||||||||||||||||||||    
T  116823 ccttttacaataaaacaaaac 116803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 25356891 - 25356768
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  25356891 acaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgattttttcaataaaaattagctacttaaccat 25356792  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||||||||    
T  25356791 gccttttacaataaaacaaaacaa 25356768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 22664459 - 22664343
Alignment:
Q  24 tttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttg-tgtcatgatattttcaataaaaattagctacttaaccatgcctttt 122  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  22664459 tttgctttcatgtacaagaatcaatcgaataggaggagacaatgaaaatttttatgtcatgatattttcaataaaaattagctacttaaccatgcctttt 22664360  T
Q  123 acaataaaacaaaacaa 139  Q
    |||||||||||||||||    
T  22664359 acaataaaacaaaacaa 22664343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 22045495 - 22045618
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||    
T  22045495 acaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgattttttcaataaaaattagctacttaactat 22045594  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    |||||||||||||||||| |||||    
T  22045595 gccttttacaataaaacagaacaa 22045618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 24796119 - 24796242
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||| ||    
T  24796119 acaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgattttttcaataaaagttagctacttaactat 24796218  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    |||||||||||||||||| |||||    
T  24796219 gccttttacaataaaacagaacaa 24796242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 16775031 - 16774907
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattt-tgtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    ||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||    
T  16775031 acaagagtttgcttttatgtacaagaatcaacaaaataagaggagacaatgaaaatttgtgtgtcatgattttttcaataaaaattagctacttaactat 16774932  T
Q  116 gcc-ttttacaataaaacaaaacaa 139  Q
    ||| |||||||||||||||||||||    
T  16774931 gcctttttacaataaaacaaaacaa 16774907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 17589788 - 17589664
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatatttt-caataaaaattagctacttaacca 114  Q
    ||||||||||||||||||| |||||||||||  || ||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||| |    
T  17589788 acaagagtttgctttcatgcacaagaatcaacaaattaagaggagacaatgaaaatttttgtgtcatgatttttttcaataaaaattagctacttaacta 17589689  T
Q  115 tgccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||| |||||    
T  17589688 tgccttttacaataaaacagaacaa 17589664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 27626966 - 27626850
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    ||||||||||||||| |||||||||||       ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||    
T  27626966 acaagagtttgcttttatgtacaagaa-------aataagaggagacaatgaaaatttttgtgtcatgatgttttcaataaaaattagctacttaatcat 27626874  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||||||||    
T  27626873 gccttttacaataaaacaaaacaa 27626850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 25145599 - 25145722
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaataaaaattagctacttaaccat 115  Q
    |||||||||  ||||||||||||||||  || ||| |||||||||||||| |||| ||| |||||||||| |||||||||||||  ||||||||||||||    
T  25145599 acaagagttcactttcatgtacaagaaataaccaattaagaggagacaataaaaaatttatgtcatgatatttttcaataaaaacaagctacttaaccat 25145698  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    |||||| ||||||||||| |||||    
T  25145699 gcctttcacaataaaacagaacaa 25145722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 24517157 - 24517275
Alignment:
Q  19 aagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatat-tttcaataaaaattagctacttaaccatgc 117  Q
    |||||||  |||||||||||||||| ||| ||| | |||||||||||| ||| |||| || |||| | | ||||| ||||||  ||||||||||||||||    
T  24517157 aagagttcactttcatgtacaagaaacaaccaactgagaggagacaataaaatttttatgccatgctttatttcattaaaaacaagctacttaaccatgc 24517256  T
Q  118 cttttacaataaaacaaaa 136  Q
    |||| |||| |||||||||    
T  24517257 ctttcacaagaaaacaaaa 24517275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 24820854 - 24820971
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaat--gaaaattttgtgtcatgatatttt-caataaaaattagctacttaacc 113  Q
    |||||||||| ||||||||||||||||  || ||| ||||||||||||||   ||||  || ||| || ||||||| |||||||||  ||||||||||||    
T  24820854 acaagagtttactttcatgtacaagaaataaccaattaagaggagacaataaaaaaaaattatgtaataatattttccaataaaaacaagctacttaacc 24820953  T
Q  114 atgccttttacaataaaa 131  Q
    |||||||| |||||||||    
T  24820954 atgcctttcacaataaaa 24820971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 139
Target Start/End: Original strand, 25371860 - 25371913
Alignment:
Q  86 attttcaataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 139  Q
    |||||||||||||||  ||||||||| ||||||||| ||||| |||||||||||    
T  25371860 attttcaataaaaataggctacttaatcatgcctttcacaattaaacaaaacaa 25371913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 25366602 - 25366710
Alignment:
Q  28 ctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatgccttttacaat 127  Q
    |||||||||||||||| ||| | | | |||||||||||  |||||||  |||||| ||  ||||||||||||  |||||||||| |||||||||  |||     
T  25366602 ctttcatgtacaagaaacaaccgatttagaggagacaacaaaaattta-tgtcataat--tttcaataaaaacaagctacttaatcatgcctttcgcaac 25366698  T
Q  128 aaaacaaaacaa 139  Q
    ||||||||||||    
T  25366699 aaaacaaaacaa 25366710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 12866 - 12744
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12866 acaagagtttgctttcatgtacaagaatcaaccaaataagaggagacaatgaaaattttgtgtcatgatattttccataaaaattagctacttaaccatg 12767  T
Q  117 ccttttacaataaaacaaaacaa 139  Q
    |||||||||||||||||||||||    
T  12766 ccttttacaataaaacaaaacaa 12744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 115; Significance: 2e-58; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 21955454 - 21955332
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21955454 acaagagtttgctttcatgtacaagaatcaaccaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 21955355  T
Q  117 ccttttacaataaaacaaaacaa 139  Q
    ||||||||||| |||||||||||    
T  21955354 ccttttacaatgaaacaaaacaa 21955332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 21381472 - 21381349
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21381472 acaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatattttcaataaaaattagctacttaaccat 21381373  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||||||||    
T  21381372 gccttttacaataaaacaaaacaa 21381349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 21099626 - 21099748
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  21099626 acaagagtttgctttcatgtacaagaatcaaccaaataagaggagacaatgaaaattttgtgtcgtgatattttccataaaaattagctacttaaccatg 21099725  T
Q  117 ccttttacaataaaacaaaacaa 139  Q
    ||||||| |||||||||||||||    
T  21099726 ccttttagaataaaacaaaacaa 21099748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 23910820 - 23910697
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    ||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23910820 acaagagtttgcttttatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatattttcaataaaaattagctacttaaccat 23910721  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||||||||    
T  23910720 gccttttacaataaaacaaaacaa 23910697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 8313847 - 8313724
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||    
T  8313847 acaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatgttttcaataaaaattagctacttaatcat 8313748  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||||||||    
T  8313747 gccttttacaataaaacaaaacaa 8313724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 8323683 - 8323809
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatg-aaaattttgtgtcatga---tattttcaataaaaattagctacttaac 112  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||   | ||||||||||||||||||| ||||||    
T  8323683 acaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaaattttgtgtcatgatttttttttcaataaaaattagctgcttaac 8323782  T
Q  113 catgccttttacaataaaacaaaacaa 139  Q
     ||||||||||||||||||||||||||    
T  8323783 tatgccttttacaataaaacaaaacaa 8323809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 17620121 - 17619998
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaataaaaattagctacttaaccat 115  Q
    |||||||||  ||||||||||||||||  || ||| |||||||||||||| |||| ||| |||||||||| |||||||||||||  ||||||||||||||    
T  17620121 acaagagttcactttcatgtacaagaaataaccaattaagaggagacaataaaaaatttatgtcatgatatttttcaataaaaacaagctacttaaccat 17620022  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    |||||| ||||||||||| |||||    
T  17620021 gcctttcacaataaaacagaacaa 17619998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 20039823 - 20039946
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatatttt-caataaaaattagctacttaaccat 115  Q
    |||||||||  ||||||||||||||||  || ||| |||||||||||||| | || ||| |||||||||||||| |||||||||  ||||||||||||||    
T  20039823 acaagagttcactttcatgtacaagaaataaccaattaagaggagacaataagaaatttatgtcatgatatttttcaataaaaacaagctacttaaccat 20039922  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    |||||| ||||||||||| |||||    
T  20039923 gcctttcacaataaaacagaacaa 20039946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 21854614 - 21854737
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatatttt-caataaaaattagctacttaaccat 115  Q
    |||||||||  ||||||||||||||||  || ||| |||||| ||||||| |||| ||| |||||||||||||| |||||||||  ||||||||||||||    
T  21854614 acaagagttcactttcatgtacaagaaataaccaattaagagtagacaataaaaaatttatgtcatgatatttttcaataaaaacaagctacttaaccat 21854713  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    |||||| ||||||||||| |||||    
T  21854714 gcctttcacaataaaacagaacaa 21854737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 21942274 - 21942395
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    |||||||||| ||||||||||||||||| || | | |||||||||||||| |||| ||| |||||| || |||||||||||||  |||||||||| ||||    
T  21942274 acaagagtttactttcatgtacaagaattaacctattaagaggagacaataaaaaatttatgtcataat-ttttcaataaaaacaagctacttaatcatg 21942372  T
Q  117 ccttttacaataaaacaaaacaa 139  Q
    |||||  |||| |||||||||||    
T  21942373 cctttcgcaattaaacaaaacaa 21942395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 139
Target Start/End: Complemental strand, 19365415 - 19365288
Alignment:
Q  12 gaaagacaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatt--ttgtgtcatgatattttcaataaaaattagctactt 109  Q
    |||| |||| |||||  ||||||||||||||| | | ||| |||||||||||||| ||||    || ||||||||| |||||||||||||  ||||||||    
T  19365415 gaaacacaatagtttattttcatgtacaagaaacgaccaa-taagaggagacaataaaaaaaaattatgtcatgat-ttttcaataaaaacaagctactt 19365318  T
Q  110 aaccatgccttttacaataaaacaaaacaa 139  Q
    || ||||||||| |||||||||||||||||    
T  19365317 aatcatgcctttcacaataaaacaaaacaa 19365288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 20711845 - 20711727
Alignment:
Q  19 aagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatat-tttcaataaaaattagctacttaaccatgc 117  Q
    |||||||  |||||||||||||||| ||| ||| | |||||||||||| ||| |||| || |||| | | ||||| ||||||  ||||||||||||||||    
T  20711845 aagagttcactttcatgtacaagaaacaaccaactgagaggagacaataaaatttttatgccatgctttatttcattaaaaacaagctacttaaccatgc 20711746  T
Q  118 cttttacaataaaacaaaa 136  Q
    |||| |||| |||||||||    
T  20711745 ctttcacaagaaaacaaaa 20711727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 16419444 - 16419567
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatt---ttgtgtcatgatattttcaataaaaattagctacttaacc 113  Q
    |||||||||| |||||||||||||||| | | ||| |||||||||||||| ||||     || ||||||||| |||||||||||||  |||||||||| |    
T  16419444 acaagagtttactttcatgtacaagaaacgaccaa-taagaggagacaataaaaaaaaaattatgtcatgat-ttttcaataaaaacaagctacttaatc 16419541  T
Q  114 atgccttttacaataaaacaaaacaa 139  Q
    |||||||| || || |||||||||||    
T  16419542 atgcctttcactatgaaacaaaacaa 16419567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 22369270 - 22369222
Alignment:
Q  91 caataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 139  Q
    |||||||||| |||| ||||  |||||||||||||||||||||||||||    
T  22369270 caataaaaataagctgcttattcatgccttttacaataaaacaaaacaa 22369222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 139
Target Start/End: Complemental strand, 20375181 - 20375071
Alignment:
Q  29 tttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatgccttttacaata 128  Q
    ||||||||||||||| ||| ||| | |||||| ||||  |||| ||| |||||| | ||||||||||||||  |||  ||||| |||||||||  |||||    
T  20375181 tttcatgtacaagaaacaaccaatttagaggaaacaacaaaaaatttatgtcataaaattttcaataaaaacaagccgcttaatcatgcctttcgcaata 20375082  T
Q  129 aaacaaaacaa 139  Q
    || || |||||    
T  20375081 aatcataacaa 20375071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 19766856 - 19766808
Alignment:
Q  91 caataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 139  Q
    |||||||||  |||| ||||  |||||||||||||||||||||||||||    
T  19766856 caataaaaacaagctgcttattcatgccttttacaataaaacaaaacaa 19766808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 2e-58; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 23514447 - 23514325
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23514447 acaagagtttgctttcatgtacaagaatcaaccaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 23514348  T
Q  117 ccttttacaataaaacaaaacaa 139  Q
     ||||||||||||||||||||||    
T  23514347 tcttttacaataaaacaaaacaa 23514325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 9582293 - 9582171
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9582293 acaagagtttgctttcttgtacaagaatcaatcaaataaaaggagacaatgaaaattttgtgtcatgatattttcaataaaaaatagctacttaaccatg 9582194  T
Q  117 ccttttacaataaaacaaaacaa 139  Q
    |||||||||||||||||||||||    
T  9582193 ccttttacaataaaacaaaacaa 9582171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 14550476 - 14550354
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    |||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14550476 acaagagtttgctttcatgtacaagaatcaacaaaataaaaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 14550377  T
Q  117 ccttttacaataaaacaaaacaa 139  Q
    |||||||||||||||||||||||    
T  14550376 ccttttacaataaaacaaaacaa 14550354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 8717245 - 8717122
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    |||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8717245 acaagagtttgctttcatgtacaataatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatattttcaataaaaattagctacttaaccat 8717146  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||||||||    
T  8717145 gccttttacaataaaacaaaacaa 8717122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 13673236 - 13673113
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    ||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  13673236 acaagagtttgcttttatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatgttttcaataaaaattagctacttaaccat 13673137  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||||||||    
T  13673136 gccttttacaataaaacaaaacaa 13673113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 18594101 - 18594224
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    ||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  18594101 acaagagtttgcttttatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatgttttcaataaaaattagctacttaaccat 18594200  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||||||||    
T  18594201 gccttttacaataaaacaaaacaa 18594224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 18617583 - 18617460
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    ||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  18617583 acaagagtttgcttttatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatgttttcaataaaaattagctacttaaccat 18617484  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||||||||    
T  18617483 gccttttacaataaaacaaaacaa 18617460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 16150317 - 16150441
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgata-ttttcaataaaaattagctacttaacca 114  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||  |||||||||||||    
T  16150317 acaagagtttgcttttatgtacaagaatcaatcaaataagaggagacaatgaaaatttttgtgtcatgatatttttcaataaaaacaagctacttaacca 16150416  T
Q  115 tgccttttacaataaaacaaaacaa 139  Q
    ||||||| |||||||||||||||||    
T  16150417 tgcctttcacaataaaacaaaacaa 16150441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 539594 - 539716
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatat-tttcaataaaaattagctacttaaccat 115  Q
    |||||||||||||||||||||||| || | | ||| |||||||||||||| |||||||| |||||||||   ||||| ||||||  ||||||||||||||    
T  539594 acaagagtttgctttcatgtacaaaaaacgaccaa-taagaggagacaataaaaattttatgtcatgattgatttcattaaaaacaagctacttaaccat 539692  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||||||||    
T  539693 gccttttacaataaaacaaaacaa 539716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 10432577 - 10432699
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaataaaaattagctacttaaccat 115  Q
    |||||||| | ||||||||||||||||  || ||| |||||||||||||| |||||||  |||||||||| |||||||||||||| ||||||||||| ||    
T  10432577 acaagagtatactttcatgtacaagaaataaccaattaagaggagacaataaaaattta-tgtcatgatacttttcaataaaaataagctacttaactat 10432675  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    |||||| |||||||||||||||||    
T  10432676 gcctttcacaataaaacaaaacaa 10432699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 13657303 - 13657180
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatat-tttcaataaaaattagctacttaaccat 115  Q
    |||||||||  |||||||||||||||| | | ||| |||||||||||||| |||||| | ||||||||| | ||||| ||||||  ||||||||||||||    
T  13657303 acaagagttcactttcatgtacaagaaacgaccaactaagaggagacaataaaaattatatgtcatgatttatttcattaaaaacaagctacttaaccat 13657204  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||||||||    
T  13657203 gccttttacaataaaacaaaacaa 13657180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 16466451 - 16466573
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatat-tttcaataaaaattagctacttaaccat 115  Q
    ||||||||||  ||||||||||||||| | | ||| |||||||||||||| |||||||| |||||||||   ||||| ||||||  ||||||||||||||    
T  16466451 acaagagtttaatttcatgtacaagaaacgaccaa-taagaggagacaataaaaattttatgtcatgattgatttcattaaaaacaagctacttaaccat 16466549  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||||||||    
T  16466550 gccttttacaataaaacaaaacaa 16466573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 11927744 - 11927863
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatat-tttcaataaaaattagctacttaaccat 115  Q
    |||||||||| |||||||||||||||| | | ||| |||||||||| ||| |||||||| |||||||||   ||||| ||||||  ||||||||||||||    
T  11927744 acaagagtttactttcatgtacaagaaacgaccaa-taagaggagataataaaaattttatgtcatgattgatttcattaaaaacaagctacttaaccat 11927842  T
Q  116 gccttttacaataaaacaaaa 136  Q
    |||||||||||||||||||||    
T  11927843 gccttttacaataaaacaaaa 11927863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 22 - 139
Target Start/End: Complemental strand, 16531479 - 16531364
Alignment:
Q  22 agtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatgccttt 121  Q
    ||||| |||||||||||||||| | | ||| ||| |||||||||| |||| ||| ||||||||| |||||||||||||  |||||||||| |||||||||    
T  16531479 agtttactttcatgtacaagaaacgaccaa-taaaaggagacaataaaaaatttatgtcatgat-ttttcaataaaaacaagctacttaatcatgccttt 16531382  T
Q  122 tacaataaaacaaaacaa 139  Q
     |||||||||||||||||    
T  16531381 cacaataaaacaaaacaa 16531364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 22 - 139
Target Start/End: Original strand, 16634183 - 16634298
Alignment:
Q  22 agtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatgccttt 121  Q
    ||||| |||||||||||||||| | | ||| ||| |||||||||| |||| ||| ||||||||| |||||||||||||  |||||||||| |||||||||    
T  16634183 agtttactttcatgtacaagaaacgaccaa-taaaaggagacaataaaaaatttatgtcatgat-ttttcaataaaaacaagctacttaatcatgccttt 16634280  T
Q  122 tacaataaaacaaaacaa 139  Q
     |||||||||||||||||    
T  16634281 cacaataaaacaaaacaa 16634298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 12566396 - 12566278
Alignment:
Q  19 aagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatgcc 118  Q
    |||||||| |||||||||||||||| ||| ||| | |||||||||||| || ||||  ||||||||| |||||||||||||  || || |||| ||||||    
T  12566396 aagagtttactttcatgtacaagaaacaaccaatttagaggagacaataaacattta-tgtcatgat-ttttcaataaaaacaagttatttaatcatgcc 12566299  T
Q  119 ttttacaataaaacaaaacaa 139  Q
    ||| |||||||||||||||||    
T  12566298 tttcacaataaaacaaaacaa 12566278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 29 - 139
Target Start/End: Complemental strand, 13355604 - 13355496
Alignment:
Q  29 tttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatgccttttacaata 128  Q
    ||||||||||||||| ||| ||| | |||||||||||  |||||||  |||||| || |||||||||||||  |||||||||| ||||||||| ||||||    
T  13355604 tttcatgtacaagaaacaaccaatttagaggagacaacaaaaattta-tgtcataat-ttttcaataaaaacaagctacttaatcatgcctttcacaata 13355507  T
Q  129 aaacaaaacaa 139  Q
    |||||||||||    
T  13355506 aaacaaaacaa 13355496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 48802699 - 48802807
Alignment:
Q  28 ctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatgccttttacaat 127  Q
    |||||||||||||||| ||||||| | |||||||||||  |||||||  |||||| ||  ||||||||||||  |||||||||| |||||||||  ||||    
T  48802699 ctttcatgtacaagaaacaatcaatttagaggagacaacaaaaattta-tgtcataat--tttcaataaaaacaagctacttaatcatgcctttcgcaat 48802795  T
Q  128 aaaacaaaacaa 139  Q
     |||||||||||    
T  48802796 taaacaaaacaa 48802807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 4312116 - 4311998
Alignment:
Q  19 aagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatgcc 118  Q
    |||||||  |||||||||||||||| ||| ||| | |||||||||||  |||||||  |||||| ||  ||||||||||||  |||||||||| ||||||    
T  4312116 aagagttcactttcatgtacaagaaacaaccaatttagaggagacaacaaaaattta-tgtcataat--tttcaataaaaacaagctacttaatcatgcc 4312020  T
Q  119 ttttacaa-taaaacaaaacaa 139  Q
    ||| |||| | |||||||||||    
T  4312019 tttcacaatttaaacaaaacaa 4311998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 131
Target Start/End: Complemental strand, 20107670 - 20107558
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    |||||||||  |||||||||||||||| ||| ||| | |||||||||||  |||| ||| |||||| || ||||||||| |||  |||||||||| ||||    
T  20107670 acaagagttcactttcatgtacaagaaacaaccaacttagaggagacaa-caaaaatttatgtcataat-ttttcaatagaaacaagctacttaatcatg 20107573  T
Q  117 ccttttacaataaaa 131  Q
     ||||  ||||||||    
T  20107572 tctttcgcaataaaa 20107558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 824951 - 824903
Alignment:
Q  91 caataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 139  Q
    |||||||||  |||| ||||  |||||||||||||||||||||||||||    
T  824951 caataaaaacaagctgcttattcatgccttttacaataaaacaaaacaa 824903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 15207471 - 15207519
Alignment:
Q  91 caataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 139  Q
    |||||||||  |||| ||||  |||||||||||||||||||||||||||    
T  15207471 caataaaaacaagctgcttattcatgccttttacaataaaacaaaacaa 15207519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 15917668 - 15917716
Alignment:
Q  91 caataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 139  Q
    |||||||||  |||| ||||  |||||||||||||||||||||||||||    
T  15917668 caataaaaacaagctgcttattcatgccttttacaataaaacaaaacaa 15917716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 2e-58; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 23711512 - 23711634
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23711512 acaagagtttgcttttatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgccatgatattttcaataaaaattagctacttaaccatg 23711611  T
Q  117 ccttttacaataaaacaaaacaa 139  Q
    |||||||||||||||||||||||    
T  23711612 ccttttacaataaaacaaaacaa 23711634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 20791551 - 20791662
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20791551 acaagagtttgctttcatgtacaagaatcaaccaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 20791650  T
Q  117 ccttttacaata 128  Q
    ||||||||||||    
T  20791651 ccttttacaata 20791662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 15734914 - 15734791
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    |||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15734914 acaagagtttgctttcatgtacaataatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatattttcaataaaaattagctacttaaccat 15734815  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||||||||    
T  15734814 gccttttacaataaaacaaaacaa 15734791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 20596664 - 20596787
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  20596664 acaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatattttcaataaaaattagctacttacccat 20596763  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||||||||    
T  20596764 gccttttacaataaaacaaaacaa 20596787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 20602950 - 20603073
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  20602950 acaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatattttcaataaaaattagctacttacccat 20603049  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||||||||    
T  20603050 gccttttacaataaaacaaaacaa 20603073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 20609241 - 20609364
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  20609241 acaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatattttcaataaaaattagctacttacccat 20609340  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||||||||    
T  20609341 gccttttacaataaaacaaaacaa 20609364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 24939908 - 24939793
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24939908 acaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaagttttgtgtcatgatattttcaataaaaattagctacttaaccatg 24939809  T
Q  117 ccttttacaataaaac 132  Q
    ||||||||||||||||    
T  24939808 ccttttacaataaaac 24939793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 18072280 - 18072157
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||| |||    
T  18072280 acaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaattttttgtgtcatgatgttttcaataaaaattagctacttaatcat 18072181  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||||||||    
T  18072180 gccttttacaataaaacaaaacaa 18072157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 20621542 - 20621419
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    ||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||    
T  20621542 acaagagtttgcttttatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatgttttcaatataaattagctacttaaccat 20621443  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||||||||    
T  20621442 gccttttacaataaaacaaaacaa 20621419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 23747430 - 23747307
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    ||||||||||||||| ||| |||||||||||  |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||    
T  23747430 acaagagtttgcttttatgcacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatgttttcaataaaaattagctacttaactat 23747331  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||| ||||||||||||||    
T  23747330 gccttttaccataaaacaaaacaa 23747307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 24954008 - 24954132
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    ||||||||||||||| ||| | |||||||||  |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||    
T  24954008 acaagagtttgcttttatgcataagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgattttttcaataaaaattagctacttaactat 24954107  T
Q  116 gcc-ttttacaataaaacaaaacaa 139  Q
    ||| |||||||||||||||||||||    
T  24954108 gcctttttacaataaaacaaaacaa 24954132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 20445664 - 20445788
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatt-ttgtgtcatgatatttt-caataaaaattagctacttaacca 114  Q
    |||||||||| ||||||||||||||||| || ||| |||||||||||||| ||||   || |||||||||||||| |||||||||| |||||||||||||    
T  20445664 acaagagtttactttcatgtacaagaattaaccaattaagaggagacaataaaaaaaattatgtcatgatatttttcaataaaaataagctacttaacca 20445763  T
Q  115 tgccttttacaataaaacaaaacaa 139  Q
    ||| ||| ||||||||||| |||||    
T  20445764 tgcatttcacaataaaacagaacaa 20445788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 24219213 - 24219091
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaataaaaattagctacttaaccat 115  Q
    |||||||||| ||||||||||||||||  || ||| |||||||||||||| |||| ||| |||||||||| |||||||||||||  |||||||||| |||    
T  24219213 acaagagtttactttcatgtacaagaaataaccaattaagaggagacaat-aaaaatttatgtcatgatatttttcaataaaaacaagctacttaatcat 24219115  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    |||||| |||||||||| ||||||    
T  24219114 gcctttcacaataaaacgaaacaa 24219091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 23601478 - 23601601
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaataaaaattagctacttaaccat 115  Q
    |||||||||  ||||||||||||||||  || ||| |||||||||||||| |||| ||| |||||||||| ||||||||||||   ||||||||||||||    
T  23601478 acaagagttcactttcatgtacaagaaataaccaattaagaggagacaataaaaaatttatgtcatgatatttttcaataaaatcaagctacttaaccat 23601577  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
     ||||| ||||||||||| |||||    
T  23601578 ccctttcacaataaaacagaacaa 23601601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 21281816 - 21281868
Alignment:
Q  87 ttttcaataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 139  Q
    |||||||||||||  |||||||||| ||||||||| |||||||||||||||||    
T  21281816 ttttcaataaaaacaagctacttaatcatgcctttcacaataaaacaaaacaa 21281868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 20574839 - 20574720
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    |||||||||  |||||||||||||||| ||| ||| | |||||||||||  |||||||  |||||| ||  ||||||||||||  |||||||||| ||||    
T  20574839 acaagagttcactttcatgtacaagaaacaaccaatttagaggagacaacaaaaattta-tgtcataat--tttcaataaaaacaagctacttaatcatg 20574743  T
Q  117 ccttttacaataaaacaaaacaa 139  Q
     ||||  |||| |||||||||||    
T  20574742 tctttcgcaattaaacaaaacaa 20574720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 22854884 - 22854836
Alignment:
Q  91 caataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 139  Q
    |||||||||  |||| ||||  |||||||||||||||||||||||||||    
T  22854884 caataaaaacaagctgcttattcatgccttttacaataaaacaaaacaa 22854836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 115; Significance: 2e-58; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 27046254 - 27046132
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27046254 acaagagtttgcttttatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgccatgatattttcaataaaaattagctacttaaccatg 27046155  T
Q  117 ccttttacaataaaacaaaacaa 139  Q
    |||||||||||||||||||||||    
T  27046154 ccttttacaataaaacaaaacaa 27046132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 20236847 - 20236732
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  20236847 acaagagtttgctttcatgtacaagaatcaaccaaataagaggagataatgaaaattttgtgtcatgatattttcaataagaattagctacttgaccatg 20236748  T
Q  117 ccttttacaataaaac 132  Q
    ||||||||||||||||    
T  20236747 ccttttacaataaaac 20236732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 21799498 - 21799621
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||    
T  21799498 acaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgatgttttcaataaaaattagctacttaatcat 21799597  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||| ||||||||||||||||    
T  21799598 gcctttttcaataaaacaaaacaa 21799621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 17095437 - 17095560
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaa-ttttgtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||| |||    
T  17095437 acaagagtttgctttcatgtacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcacgatactttcaataaaaattagctacttaaacat 17095536  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    |||||| |||||||||| ||||||    
T  17095537 gcctttcacaataaaacgaaacaa 17095560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 3989475 - 3989352
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatatttt-caataaaaattagctacttaaccat 115  Q
    |||||||||| |||| |||||||||||| || ||| |||||||||||||| |||| ||| |||||||||||||| |||||||||| ||||||||||||||    
T  3989475 acaagagtttacttttatgtacaagaattaaccaattaagaggagacaataaaaaatttatgtcatgatatttttcaataaaaataagctacttaaccat 3989376  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    |||||| |||||||||||||||||    
T  3989375 gcctttcacaataaaacaaaacaa 3989352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 122749 - 122627
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  122749 acaagagtttgcttttatgtacatgaatcaatcaaataagtggagacaatgaaaattttgtgccatgatattttcaataaaaattagctacttaaccatg 122650  T
Q  117 ccttttacaataaaacaaaacaa 139  Q
    |||||||||||||||||||||||    
T  122649 ccttttacaataaaacaaaacaa 122627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 24966 - 24851
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24966 acaagagtttgcttttatgtacaagaatcaa-caaataagaggagacaatgaaaatttttgtgtcatgatattttcaataaaaattagctacttaaccat 24868  T
Q  116 gccttttacaataaaac 132  Q
    |||||| ||||||||||    
T  24867 gcctttcacaataaaac 24851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 22 - 146
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatatttt-caataaaaattagctacttaacca 114  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||| |||||||||| |||| ||||| ||||||||||||||||||    
T  22 acaagagtttgctttcatgtacaagaatcaacaaaataagaggcgacaatgaaaatttttgtgtcatgatttttttcaatagaaattagctacttaacca 121  T
Q  115 tgccttttacaataaaacaaaacaa 139  Q
    |||||||||||||||||||||||||    
T  122 tgccttttacaataaaacaaaacaa 146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 419 - 295
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatttt-gtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    ||||||||||||||| ||| |||||||||||  |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||    
T  419 acaagagtttgcttttatgcacaagaatcaacaaaataagaggagacaatgaaaatttttgtgtcatgattttttcaataaaaattagctacttaactat 320  T
Q  116 gcc-ttttacaataaaacaaaacaa 139  Q
    ||| |||||||||||||||||||||    
T  319 gcctttttacaataaaacaaaacaa 295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 57 - 132
Target Start/End: Original strand, 7843 - 7918
Alignment:
Q  57 aggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatgccttttacaataaaac 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7843 aggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatgccttttacaataaaac 7918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 74; Significance: 6e-34; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 252703 - 252828
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatat-tttcaataaaaattagctacttaaccat 115  Q
    |||||||||| |||||||||||||||| | | ||| |||||||||||||| |||||||| ||||||||| | ||||| ||||||  ||||||||||||||    
T  252703 acaagagtttactttcatgtacaagaaacgaacaactaagaggagacaataaaaattttatgtcatgatttatttcattaaaaacaagctacttaaccat 252802  T
Q  116 gccttttacaataaaacaaaacaatg 141  Q
    ||||||||||||||||||||||||||    
T  252803 gccttttacaataaaacaaaacaatg 252828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 355329 - 355453
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaat-tttgtgtcatgatatttt-caataaaaattagctacttaacca 114  Q
    |||||||||  ||||||||||||||||  || ||| |||||||||||||| ||||  ||| ||||| |||||||| |||||||||| |||||||||||||    
T  355329 acaagagttcactttcatgtacaagaaataaccaattaagaggagacaataaaaaaatttatgtcacgatatttttcaataaaaataagctacttaacca 355428  T
Q  115 tgccttttacaataaaacaaaacaa 139  Q
    ||||||| ||||||||||| |||||    
T  355429 tgcctttcacaataaaacagaacaa 355453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 18872 - 18920
Alignment:
Q  91 caataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 139  Q
    |||||||||  |||| ||||  |||||||||||||||||||||||||||    
T  18872 caataaaaacaagctgcttattcatgccttttacaataaaacaaaacaa 18920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 51327 - 51450
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaataaaaattagctacttaaccat 115  Q
    |||||||||| ||||||||||||||||| ||  || |||||||||||||| | |||||| |||||||||| |||||||||||||| ||||||||||||||    
T  51327 acaagagtttactttcatgtacaagaattaactaattaagaggagacaataagaattttatgtcatgatatttttcaataaaaataagctacttaaccat 51426  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    | |||| |||||||||||||||||    
T  51427 gtctttcacaataaaacaaaacaa 51450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 116027 - 115904
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatat-tttcaataaaaattagctacttaaccat 115  Q
    |||||||||| |||||||||||||||| | | ||| |||||||||||||| |||||||| ||||||||| | ||||  ||||||  ||||||||||||||    
T  116027 acaagagtttactttcatgtacaagaaacgaccaactaagaggagacaataaaaattttatgtcatgatttatttctttaaaaacaagctacttaaccat 115928  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||||||||    
T  115927 gccttttacaataaaacaaaacaa 115904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 120331 - 120208
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatat-tttcaataaaaattagctacttaaccat 115  Q
    |||||||||| |||||||||||||||| | | ||| |||||||||||||| |||||||| ||||||||| | ||||  ||||||  ||||||||||||||    
T  120331 acaagagtttactttcatgtacaagaaacgaccaactaagaggagacaataaaaattttatgtcatgatttatttctttaaaaacaagctacttaaccat 120232  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||||||||||||||||||||    
T  120231 gccttttacaataaaacaaaacaa 120208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 4445 - 4565
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatat-tttcaataaaaattagctacttaaccat 115  Q
    |||||||||| |||||||||||||||| ||| ||| |||||||||||||| |||| ||| ||||||||| | ||||| ||||||  ||||||||||||||    
T  4445 acaagagtttactttcatgtacaagaaacaaccaactaagaggagacaataaaaaatttatgtcatgatttatttcattaaaaacaagctacttaaccat 4544  T
Q  116 gccttttacaataaaacaaaa 136  Q
    |||||| |||| |||||||||    
T  4545 gcctttcacaacaaaacaaaa 4565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0974 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0974
Description:

Target: scaffold0974; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 493 - 371
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatatttt-caataaaaattagctacttaaccat 115  Q
    |||||||||| |||||||||||||||| | | ||| |||||||||||||| |||| ||| ||||||||| |||| |||||||||  |||||||||| |||    
T  493 acaagagtttactttcatgtacaagaaacgaccaa-taagaggagacaataaaaaatttatgtcatgatttttttcaataaaaacaagctacttaatcat 395  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    |||||| |||||||||||||||||    
T  394 gcctttcacaataaaacaaaacaa 371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 7391 - 7269
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatat-tttcaataaaaattagctacttaaccat 115  Q
    |||||||||  |||||||||||||||| ||||||| |||||||||||||| |||||||| ||||||||| | ||||| ||||||  |||||||||| |||    
T  7391 acaagagttcactttcatgtacaagaaacaatcaactaagaggagacaat-aaaattttatgtcatgatttatttcattaaaaacaagctacttaatcat 7293  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    ||||||  ||||||||||||||||    
T  7292 gcctttcgcaataaaacaaaacaa 7269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 17379 - 17502
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatatttt-caataaaaattagctacttaaccat 115  Q
    |||||||||  ||||||||||||||||  || ||| |||||| ||||||| |||| ||| |||||||||||||| |||||||||  ||||||||||||||    
T  17379 acaagagttcactttcatgtacaagaaataaccaattaagagcagacaataaaaaatttatgtcatgatatttttcaataaaaacaagctacttaaccat 17478  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    |||||| ||||||||||| |||||    
T  17479 gcctttcacaataaaacagaacaa 17502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 131
Target Start/End: Complemental strand, 44830 - 44715
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaataaaaattagctacttaaccat 115  Q
    |||||||||| ||||||||||||||||| || ||| ||||||||||| || |||| ||| |||||||||| |||||||||||||  |||||| |||||||    
T  44830 acaagagtttactttcatgtacaagaattaaccaattaagaggagacgataaaaaatttatgtcatgatatttttcaataaaaacaagctacctaaccat 44731  T
Q  116 gccttttacaataaaa 131  Q
    |||||| |||||||||    
T  44730 gcctttcacaataaaa 44715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 131
Target Start/End: Complemental strand, 52219 - 52104
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgata-ttttcaataaaaattagctacttaaccat 115  Q
    |||||||||| ||||||||||||||||| || ||| ||||||||||| || |||| ||| |||||||||| |||||||||||||  |||||| |||||||    
T  52219 acaagagtttactttcatgtacaagaattaaccaattaagaggagacgataaaaaatttatgtcatgatatttttcaataaaaacaagctacctaaccat 52120  T
Q  116 gccttttacaataaaa 131  Q
    |||||| |||||||||    
T  52119 gcctttcacaataaaa 52104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 90642 - 90533
Alignment:
Q  28 ctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatgccttttacaat 127  Q
    |||||||||||||||| | | ||| |||||||||||||| |||| ||| ||||||||| |||||||||||||  |||||||||| ||||||||| |||||    
T  90642 ctttcatgtacaagaaacgaccaa-taagaggagacaattaaaaatttatgtcatgat-ttttcaataaaaacaagctacttaatcatgcctttcacaat 90545  T
Q  128 aaaacaaaacaa 139  Q
    ||||||||||||    
T  90544 aaaacaaaacaa 90533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 10798 - 10678
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    |||||||||  |||||||||||||||| ||| ||| | |||||||||||| |||||||  ||||||||| ||| |||||||||  |||||||||| ||||    
T  10798 acaagagttcactttcatgtacaagaaacaaccaatttagaggagacaataaaaattta-tgtcatgat-tttccaataaaaacaagctacttaatcatg 10701  T
Q  117 ccttttacaataaaacaaaacaa 139  Q
    ||||| |||||||||||||||||    
T  10700 cctttcacaataaaacaaaacaa 10678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 9574 - 9449
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaa-tgaaaattttgtgtcatgatatttt-caataaaaatta-gctacttaacc 113  Q
    |||||||||| ||||||||||||||||  || ||| |||||| |||||| | |||| ||| |||||||||||||| ||||||||| || |||||||||||    
T  9574 acaagagtttactttcatgtacaagaaataaccaattaagagaagacaaataaaaaatttatgtcatgatatttttcaataaaaaataagctacttaacc 9475  T
Q  114 atgccttttacaataaaacaaaacaa 139  Q
    |||||||| ||||||||||| |||||    
T  9474 atgcctttcacaataaaacagaacaa 9449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 59455 - 59578
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaatt---ttgtgtcatgatattttcaataaaaattagctacttaacc 113  Q
    |||||||||| |||||||||||||||| ||| ||| |||||||||||||| ||||     || ||||||||| |||||||||||||  |||||||||| |    
T  59455 acaagagtttactttcatgtacaagaaacaaccaa-taagaggagacaataaaaaaaaaattatgtcatgat-ttttcaataaaaacaagctacttaatc 59552  T
Q  114 atgccttttacaataaaacaaaacaa 139  Q
    |||||||| |||||||||||||||||    
T  59553 atgcctttcacaataaaacaaaacaa 59578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 9155 - 9275
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    ||||||||||  ||||||||||||||| ||| ||| | |||||||||||  |||||||  |||||| || |||||||||||||  |||||||||| ||||    
T  9155 acaagagtttaatttcatgtacaagaaacaaccaatttagaggagacaacaaaaattta-tgtcataat-ttttcaataaaaagaagctacttaatcatg 9252  T
Q  117 ccttttacaataaaacaaaacaa 139  Q
     |||| |||||||||||||||||    
T  9253 tctttcacaataaaacaaaacaa 9275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 222 - 101
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaat-gaaaattttgtgtcatgatattttcaataaaaattagctacttaaccat 115  Q
    |||||||||  ||||||||||||||||   | | ||||||||||||||||  ||||  || ||||||||| |||||||||||||  |||||||||| |||    
T  222 acaagagttcactttcatgtacaagaaatga-ccaataagaggagacaataaaaaaaattatgtcatgat-ttttcaataaaaacaagctacttaatcat 125  T
Q  116 gccttttacaataaaacaaaacaa 139  Q
    |||||| |||||||||||||||||    
T  124 gcctttcacaataaaacaaaacaa 101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 1075 - 1193
Alignment:
Q  19 aagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatat-tttcaataaaaattagctacttaaccatgc 117  Q
    |||||||  |||||||||||||||| ||| ||| | |||||||||||| ||| |||| || |||| | | ||||| ||||||  ||||||||||||||||    
T  1075 aagagttcactttcatgtacaagaaacaaccaactgagaggagacaataaaatttttatgccatgctttatttcattaaaaacaagctacttaaccatgc 1174  T
Q  118 cttttacaataaaacaaaa 136  Q
    |||| |||| |||||||||    
T  1175 ctttcacaagaaaacaaaa 1193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 1075 - 1195
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    |||||||||  |||||||||||||||| ||| ||| | ||||||||| |  |||||||  |||||| || |||||||||||||  |||||||||| ||||    
T  1075 acaagagttcactttcatgtacaagaaacaaccaatttagaggagaccacaaaaattta-tgtcataat-ttttcaataaaaacaagctacttaatcatg 1172  T
Q  117 ccttttacaataaaacaaaacaa 139  Q
    |||||| |||| |||||||||||    
T  1173 ccttttgcaattaaacaaaacaa 1195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 35940 - 36058
Alignment:
Q  19 aagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatat-tttcaataaaaattagctacttaaccatgc 117  Q
    |||||||  ||||||||||||||||  |  ||| |||||||||||||| |||||||| || |||| | | ||||| ||||||  ||||||||||||||||    
T  35940 aagagttcactttcatgtacaagaaatacccaactaagaggagacaataaaaattttatgccatgctttatttcattaaaaacaagctacttaaccatgc 36039  T
Q  118 cttttacaataaaacaaaa 136  Q
    |||| |||| |||||||||    
T  36040 ctttcacaagaaaacaaaa 36058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 19020 - 19137
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaat--gaaaattttgtgtcatgatatttt-caataaaaattagctacttaacc 113  Q
    |||||||||| ||||||||||||||||  || ||| ||||||||||||||   ||||  || ||| || ||||||| |||||||||  ||||||||||||    
T  19020 acaagagtttactttcatgtacaagaaataaccaattaagaggagacaataaaaaaaaattatgtaataatattttccaataaaaacaagctacttaacc 19119  T
Q  114 atgccttttacaataaaa 131  Q
    |||||||| |||||||||    
T  19120 atgcctttcacaataaaa 19137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0402 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 7164 - 7055
Alignment:
Q  28 ctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatgccttttacaat 127  Q
    |||||||||||||||| ||| ||| | |||||||||||| |||| ||| ||||||   ||||||||||||||  |||||||||| |||||||||  |||     
T  7164 ctttcatgtacaagaaacaaccaatttagaggagacaataaaaaatttatgtcat--aattttcaataaaaacaagctacttaatcatgcctttcgcaac 7067  T
Q  128 aaaacaaaacaa 139  Q
    |||||| |||||    
T  7066 aaaacataacaa 7055  T

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Target: scaffold0026 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 10532 - 10416
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    |||||||||| ||||||||||||| || ||||    | |||||||||||  |||||||  |||||| || |||||||||||||  |||||||||| ||||    
T  10532 acaagagtttactttcatgtacaacaaccaat----ttagaggagacaacaaaaattta-tgtcataat-ttttcaataaaaacaagctacttaatcatg 10439  T
Q  117 ccttttacaataaaacaaaacaa 139  Q
    ||||| |||| ||||||||||||    
T  10438 cctttcacaaaaaaacaaaacaa 10416  T

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Target: scaffold0059 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 11770 - 11651
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    |||||||||  |||||||||||||||| ||| | | | |||||||||||  |||||||  |||||| ||  ||||||||||||  |||||||||| ||||    
T  11770 acaagagttcactttcatgtacaagaaacaaccgatttagaggagacaacaaaaattta-tgtcataat--tttcaataaaaacaagctacttaatcatg 11674  T
Q  117 ccttttacaataaaacaaaacaa 139  Q
    |||||  ||| ||||||||||||    
T  11673 cctttcgcaacaaaacaaaacaa 11651  T

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Target: scaffold0013 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 233628 - 233747
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    |||||||||  |||||||||||||||| ||| | | | |||||||||||  |||||||  |||||| ||  ||||||||||||  |||||||||| ||||    
T  233628 acaagagttcactttcatgtacaagaaacaaccgatttagaggagacaacaaaaattta-tgtcataat--tttcaataaaaacaagctacttaatcatg 233724  T
Q  117 ccttttacaataaaacaaaacaa 139  Q
    |||||  ||| ||||||||||||    
T  233725 cctttcgcaacaaaacaaaacaa 233747  T

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Target: scaffold0278 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 13882 - 13999
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    |||||||||  |||||||||||||||| |||  || | |||||||||||  |||||||  |||||| ||  ||||||||||||  |||||||||| ||||    
T  13882 acaagagttcactttcatgtacaagaaacaactaatttagaggagacaacaaaaattta-tgtcataat--tttcaataaaaacaagctacttaatcatg 13978  T
Q  117 ccttttacaataaaacaaaac 137  Q
    |||||  |||| |||||||||    
T  13979 cctttcgcaattaaacaaaac 13999  T

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Target: scaffold0278; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 17216 - 17333
Alignment:
Q  17 acaagagtttgctttcatgtacaagaatcaatcaaataagaggagacaatgaaaattttgtgtcatgatattttcaataaaaattagctacttaaccatg 116  Q
    |||||||||  |||||||||||||||| |||  || | |||||||||||  |||||||  |||||  | ||||||||||||||  |||||||||| ||||    
T  17216 acaagagttcactttcatgtacaagaaacaactaatttagaggagacaacaaaaattta-tgtca--aaattttcaataaaaacaagctacttaatcatg 17312  T
Q  117 ccttttacaataaaacaaaac 137  Q
    |||||  |||| |||||||||    
T  17313 cctttcgcaattaaacaaaac 17333  T

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Target: scaffold0566 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0566
Description:

Target: scaffold0566; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 1922 - 1874
Alignment:
Q  91 caataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 139  Q
    |||||||||| |||| ||||  |||||||||||||||||||||||||||    
T  1922 caataaaaataagctccttattcatgccttttacaataaaacaaaacaa 1874  T

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Target: scaffold0375 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 11840 - 11792
Alignment:
Q  91 caataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 139  Q
    |||||||||  |||| ||||| |||||||||||||||||||||||||||    
T  11840 caataaaaacaagctgcttaatcatgccttttacaataaaacaaaacaa 11792  T

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Target: scaffold0384 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 9889 - 9841
Alignment:
Q  91 caataaaaattagctacttaaccatgccttttacaataaaacaaaacaa 139  Q
    |||||||||  |||| ||||  |||||||||||||||||||||||||||    
T  9889 caataaaaacaagctgcttattcatgccttttacaataaaacaaaacaa 9841  T

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