View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11854_low_54 (Length: 315)
Name: NF11854_low_54
Description: NF11854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11854_low_54 |
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Alignment Details
Target: chr7 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 45658831 - 45659126
Alignment:
| Q |
1 |
cagaggcaaacaattttgagctatttcttcacaaacaccatttcatttgaactttactattcttgtctaaaacttaactctcattatcgagacaatggta |
100 |
Q |
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| T |
45658831 |
cagaggcaaacaattttgagctatttcttcacaaacaccatttcatttgaactttactattcttgtctaaaacttaactctcattatcgagacaatggta |
45658930 |
T |
|
| Q |
101 |
aggttctactcattcatctcactcatttttctaaccttagcttgtttctatatacatatagttgatgagtttcaaatctttgtaatacaggcagatcaag |
200 |
Q |
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| T |
45658931 |
aggttctactcattcatctcactcatttttctaaccttagcttgtttctatatacatatagttgatgagtttcaaatctttgtaatacaggcagatcaag |
45659030 |
T |
|
| Q |
201 |
aggaaactgaagaactcaagcttctcactgaatggaagagaaagaaaggtggattcagggcttctatgtttatttttggtaagctgaagtataaac |
296 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
45659031 |
aggaaactgaagaactcaagcttctcactgaatggaagagaaagaaaggtggatttagggcttctatgtttatttttggtaagctgaagtataaac |
45659126 |
T |
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