View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11854_low_63 (Length: 296)
Name: NF11854_low_63
Description: NF11854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11854_low_63 |
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Alignment Details
Target: chr3 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 19 - 287
Target Start/End: Original strand, 28708188 - 28708456
Alignment:
| Q |
19 |
gtgaaaacacctctgcacaaagtataaacaagtaaagagataatggatccccttgatggagtccacgatgaggggaaaagattggacaaggattaccatt |
118 |
Q |
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| T |
28708188 |
gtgaaaacacctctgcacaaagtataaacaagtaaagagataatggatccccttgatggagtccacgatgaggggaaaagattggacaaggattaccatt |
28708287 |
T |
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| Q |
119 |
tacgatcactaaaacgacactgatgaaatgcatctaaaaataagattttgccatttttgtgagtccatagagttcaacacaacaacgagaaatttccact |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28708288 |
tacgatcactaaaacgacactgatgaaatgcatctaaaaataagattttgccatttttgtgagtccatagagttcaacacaacaacgagaaatttccact |
28708387 |
T |
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| Q |
219 |
aaatatgatcatatgcttttgccatatgatatctagctttacccacaagacctttctttcctttcttct |
287 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28708388 |
aaatatgatcatatgcttttgccatatgatatctagctttacccacaagacctttctttcctttcttct |
28708456 |
T |
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