View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11854_low_72 (Length: 282)

Name: NF11854_low_72
Description: NF11854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11854_low_72
NF11854_low_72
[»] chr8 (43 HSPs)
chr8 (14-189)||(6028489-6028666)
chr8 (14-189)||(25022127-25022305)
chr8 (52-189)||(32877439-32877578)
chr8 (14-189)||(36483437-36483624)
chr8 (51-189)||(2872887-2873026)
chr8 (52-189)||(16384619-16384758)
chr8 (52-189)||(32759375-32759514)
chr8 (66-189)||(28876557-28876682)
chr8 (52-189)||(34901359-34901498)
chr8 (16-189)||(4245942-4246127)
chr8 (75-189)||(13422210-13422326)
chr8 (52-185)||(22201314-22201449)
chr8 (54-189)||(19947976-19948112)
chr8 (52-186)||(43771681-43771817)
chr8 (73-189)||(12580551-12580669)
chr8 (51-186)||(37668587-37668724)
chr8 (14-189)||(45217149-45217336)
chr8 (52-184)||(32424928-32425062)
chr8 (65-185)||(27886196-27886318)
chr8 (65-185)||(27944854-27944976)
chr8 (59-143)||(42949180-42949264)
chr8 (14-189)||(19436276-19436440)
chr8 (14-189)||(19572425-19572589)
chr8 (76-189)||(37372261-37372376)
chr8 (52-185)||(27968109-27968246)
chr8 (52-185)||(28025095-28025232)
chr8 (51-186)||(5818287-5818424)
chr8 (52-182)||(32638843-32638965)
chr8 (76-185)||(5539441-5539541)
chr8 (73-186)||(38388672-38388787)
chr8 (66-189)||(29355625-29355750)
chr8 (14-58)||(12580472-12580516)
chr8 (72-139)||(17702549-17702616)
chr8 (73-121)||(12357950-12357998)
chr8 (73-121)||(12359078-12359126)
chr8 (14-58)||(32759528-32759572)
chr8 (14-61)||(5539569-5539616)
chr8 (14-60)||(8171127-8171174)
chr8 (52-185)||(20182380-20182514)
chr8 (74-153)||(23265689-23265768)
chr8 (52-99)||(40412508-40412555)
chr8 (14-58)||(13422363-13422408)
chr8 (14-58)||(16384772-16384817)
[»] chr2 (46 HSPs)
chr2 (14-189)||(4170441-4170618)
chr2 (14-185)||(6497588-6497761)
chr2 (52-189)||(7876716-7876855)
chr2 (54-189)||(16561802-16561939)
chr2 (52-189)||(18300974-18301113)
chr2 (52-189)||(38602299-38602438)
chr2 (52-189)||(40308874-40309013)
chr2 (52-189)||(4355327-4355466)
chr2 (52-189)||(33324820-33324959)
chr2 (52-189)||(22484269-22484408)
chr2 (52-189)||(6124175-6124314)
chr2 (52-189)||(34146182-34146321)
chr2 (76-189)||(22570939-22571054)
chr2 (72-189)||(24585532-24585650)
chr2 (74-185)||(35342323-35342436)
chr2 (52-189)||(7807351-7807490)
chr2 (73-181)||(4561798-4561908)
chr2 (73-189)||(14217152-14217270)
chr2 (51-186)||(2319280-2319417)
chr2 (66-189)||(1776427-1776552)
chr2 (52-190)||(8482894-8483034)
chr2 (73-186)||(44156602-44156717)
chr2 (73-189)||(31236184-31236302)
chr2 (74-174)||(40497384-40497486)
chr2 (71-189)||(28746648-28746768)
chr2 (51-189)||(20536777-20536907)
chr2 (76-190)||(37134299-37134415)
chr2 (52-183)||(35996651-35996783)
chr2 (76-182)||(1005522-1005629)
chr2 (75-183)||(3545581-3545691)
chr2 (14-58)||(7807293-7807337)
chr2 (14-58)||(7876869-7876913)
chr2 (76-127)||(3563906-3563957)
chr2 (51-90)||(5371057-5371096)
chr2 (92-189)||(5588109-5588208)
chr2 (73-181)||(25933575-25933685)
chr2 (16-58)||(18301127-18301169)
chr2 (16-58)||(22571093-22571135)
chr2 (14-55)||(16561958-16561999)
chr2 (76-121)||(45158134-45158179)
chr2 (14-57)||(33324974-33325017)
chr2 (14-57)||(38602241-38602284)
chr2 (73-189)||(21104484-21104602)
chr2 (85-182)||(43214581-43214682)
chr2 (160-189)||(3563853-3563882)
chr2 (160-189)||(45159385-45159414)
[»] chr1 (47 HSPs)
chr1 (14-185)||(43189661-43189834)
chr1 (51-189)||(37346824-37346964)
chr1 (14-189)||(8132185-8132362)
chr1 (16-189)||(31653341-31653518)
chr1 (52-189)||(20409531-20409670)
chr1 (65-189)||(5984229-5984355)
chr1 (52-189)||(28949218-28949357)
chr1 (52-189)||(37104122-37104261)
chr1 (51-189)||(13012968-13013108)
chr1 (52-189)||(1043229-1043368)
chr1 (52-189)||(6916851-6916990)
chr1 (52-189)||(38330429-38330568)
chr1 (52-189)||(52895690-52895829)
chr1 (14-182)||(28659229-28659409)
chr1 (52-181)||(1036469-1036600)
chr1 (52-189)||(3426850-3426989)
chr1 (14-182)||(25256625-25256805)
chr1 (53-185)||(14334177-14334300)
chr1 (53-190)||(30323716-30323856)
chr1 (73-189)||(10822404-10822523)
chr1 (52-190)||(29167948-29168088)
chr1 (52-189)||(38948734-38948873)
chr1 (74-189)||(34432382-34432499)
chr1 (52-182)||(36367679-36367801)
chr1 (52-190)||(40775996-40776136)
chr1 (52-143)||(24851524-24851615)
chr1 (51-182)||(2364686-2364819)
chr1 (52-189)||(9781644-9781783)
chr1 (75-183)||(14167092-14167202)
chr1 (51-190)||(32381035-32381176)
chr1 (52-190)||(41675966-41676106)
chr1 (94-189)||(2472873-2472970)
chr1 (52-153)||(48715202-48715303)
chr1 (71-186)||(3708274-3708392)
chr1 (76-182)||(15417462-15417570)
chr1 (95-177)||(9528859-9528943)
chr1 (16-58)||(38948887-38948929)
chr1 (94-189)||(29861803-29861900)
chr1 (52-149)||(41027923-41028019)
chr1 (76-140)||(2222980-2223044)
chr1 (76-186)||(33039618-33039730)
chr1 (14-57)||(1036615-1036658)
chr1 (14-57)||(1043383-1043426)
chr1 (156-189)||(36551493-36551526)
chr1 (14-58)||(37104275-37104320)
chr1 (14-58)||(38330582-38330627)
chr1 (67-189)||(37922269-37922393)
[»] chr3 (56 HSPs)
chr3 (52-189)||(35389752-35389891)
chr3 (14-189)||(42464846-42465023)
chr3 (19-189)||(48122827-48122999)
chr3 (52-189)||(22310707-22310846)
chr3 (52-189)||(7327714-7327853)
chr3 (52-189)||(28882655-28882794)
chr3 (52-189)||(40497332-40497471)
chr3 (52-189)||(1679675-1679814)
chr3 (52-189)||(52505810-52505948)
chr3 (52-189)||(37996788-37996927)
chr3 (52-189)||(52121182-52121321)
chr3 (51-151)||(33239992-33240092)
chr3 (56-189)||(41742053-41742188)
chr3 (52-189)||(6134359-6134498)
chr3 (52-189)||(28968512-28968651)
chr3 (52-189)||(55268993-55269128)
chr3 (75-189)||(2122706-2122825)
chr3 (73-189)||(13748445-13748563)
chr3 (51-153)||(45532956-45533058)
chr3 (31-189)||(53192500-53192650)
chr3 (52-189)||(22611361-22611490)
chr3 (51-181)||(42229684-42229816)
chr3 (76-189)||(22289722-22289837)
chr3 (53-189)||(52684203-52684341)
chr3 (52-189)||(28704729-28704868)
chr3 (73-173)||(3983715-3983817)
chr3 (52-143)||(19421466-19421557)
chr3 (52-185)||(25937041-25937176)
chr3 (76-183)||(983202-983311)
chr3 (52-125)||(10225139-10225212)
chr3 (75-152)||(25700801-25700878)
chr3 (71-181)||(30226430-30226542)
chr3 (52-125)||(2567375-2567448)
chr3 (73-189)||(7899717-7899835)
chr3 (95-185)||(29915867-29915959)
chr3 (95-185)||(29965020-29965112)
chr3 (75-189)||(30787562-30787678)
chr3 (197-265)||(47047552-47047623)
chr3 (52-189)||(21157706-21157845)
chr3 (53-118)||(1528567-1528631)
chr3 (14-58)||(28704882-28704926)
chr3 (73-190)||(39663959-39664078)
chr3 (14-57)||(1528647-1528690)
chr3 (122-181)||(19879140-19879201)
chr3 (73-143)||(45347347-45347417)
chr3 (96-151)||(45057253-45057308)
chr3 (14-57)||(45532909-45532952)
chr3 (132-189)||(47642019-47642078)
chr3 (159-189)||(33238725-33238755)
chr3 (160-189)||(19420907-19420936)
chr3 (14-58)||(40497485-40497530)
chr3 (52-125)||(47642074-47642147)
chr3 (73-121)||(5271541-5271589)
chr3 (52-104)||(19879080-19879132)
chr3 (74-126)||(48333147-48333199)
chr3 (14-50)||(52505752-52505788)
[»] scaffold0250 (2 HSPs)
scaffold0250 (52-190)||(5513-5653)
scaffold0250 (8-61)||(5654-5709)
[»] chr7 (49 HSPs)
chr7 (51-189)||(1043047-1043187)
chr7 (14-186)||(19510525-19510699)
chr7 (16-149)||(8028738-8028871)
chr7 (52-189)||(27353920-27354059)
chr7 (52-189)||(11829688-11829827)
chr7 (52-189)||(27555346-27555485)
chr7 (52-189)||(34238157-34238296)
chr7 (52-189)||(48163407-48163546)
chr7 (52-189)||(40095649-40095788)
chr7 (73-189)||(25969396-25969514)
chr7 (52-189)||(26773689-26773828)
chr7 (14-182)||(34122546-34122726)
chr7 (52-189)||(38262998-38263137)
chr7 (52-189)||(16850785-16850924)
chr7 (73-180)||(9250420-9250529)
chr7 (14-189)||(27397976-27398163)
chr7 (52-183)||(26845873-26846006)
chr7 (14-189)||(42897001-42897177)
chr7 (51-189)||(4291511-4291640)
chr7 (73-189)||(44960133-44960251)
chr7 (75-189)||(35159864-35159980)
chr7 (14-186)||(36202717-36202891)
chr7 (73-143)||(21409438-21409508)
chr7 (52-189)||(39520799-39520927)
chr7 (76-180)||(11058360-11058466)
chr7 (65-189)||(33454069-33454195)
chr7 (60-118)||(16564364-16564422)
chr7 (60-118)||(16601240-16601298)
chr7 (94-188)||(23079059-23079155)
chr7 (51-123)||(47720148-47720220)
chr7 (73-182)||(1363010-1363121)
chr7 (52-148)||(18113916-18114012)
chr7 (73-148)||(23311764-23311839)
chr7 (55-189)||(47238597-47238723)
chr7 (14-58)||(34238310-34238354)
chr7 (75-189)||(38064594-38064710)
chr7 (51-117)||(36660551-36660616)
chr7 (75-136)||(24956305-24956366)
chr7 (14-58)||(26843912-26843956)
chr7 (14-57)||(38263152-38263195)
chr7 (52-185)||(44269729-44269863)
chr7 (75-149)||(40041420-40041494)
chr7 (14-58)||(11829841-11829886)
chr7 (14-58)||(40095802-40095847)
chr7 (66-142)||(2908230-2908306)
chr7 (71-123)||(8056330-8056382)
chr7 (132-185)||(16564415-16564470)
chr7 (132-185)||(16601192-16601247)
chr7 (71-127)||(38064729-38064784)
[»] chr4 (39 HSPs)
chr4 (51-189)||(5834832-5834972)
chr4 (14-185)||(42472498-42472681)
chr4 (52-189)||(19738699-19738838)
chr4 (52-189)||(52122846-52122985)
chr4 (53-189)||(5325699-5325837)
chr4 (52-189)||(8064086-8064225)
chr4 (52-189)||(28376998-28377137)
chr4 (74-189)||(41145614-41145731)
chr4 (52-181)||(52721274-52721405)
chr4 (52-189)||(53322339-53322478)
chr4 (52-189)||(40694072-40694211)
chr4 (52-189)||(38492246-38492375)
chr4 (52-189)||(36511910-36512050)
chr4 (52-185)||(46431910-46432045)
chr4 (53-189)||(37992510-37992649)
chr4 (53-139)||(4400522-4400608)
chr4 (75-189)||(17892250-17892366)
chr4 (52-121)||(3403562-3403631)
chr4 (52-125)||(39957632-39957705)
chr4 (52-189)||(2586338-2586477)
chr4 (73-182)||(21637674-21637785)
chr4 (14-102)||(31226044-31226142)
chr4 (76-189)||(47607112-47607226)
chr4 (82-148)||(21058878-21058944)
chr4 (94-189)||(51858834-51858931)
chr4 (52-186)||(55901116-55901252)
chr4 (14-58)||(5325640-5325684)
chr4 (132-189)||(14795025-14795084)
chr4 (75-138)||(7429192-7429255)
chr4 (52-143)||(24793708-24793799)
chr4 (14-117)||(14795078-14795191)
chr4 (118-189)||(10257702-10257775)
chr4 (52-104)||(52572278-52572329)
chr4 (14-57)||(52122788-52122831)
chr4 (14-58)||(19738852-19738897)
chr4 (52-117)||(31946203-31946268)
chr4 (14-55)||(52572346-52572387)
chr4 (14-58)||(53322492-53322537)
chr4 (112-152)||(44121879-44121919)
[»] chr5 (50 HSPs)
chr5 (14-189)||(30918380-30918557)
chr5 (14-189)||(1639712-1639898)
chr5 (52-189)||(32707808-32707947)
chr5 (52-189)||(39690740-39690879)
chr5 (71-189)||(33829755-33829875)
chr5 (73-189)||(30777520-30777638)
chr5 (52-189)||(30284584-30284723)
chr5 (52-189)||(10656822-10656960)
chr5 (14-153)||(5986007-5986146)
chr5 (74-190)||(11906219-11906337)
chr5 (52-190)||(26691617-26691757)
chr5 (52-190)||(26961349-26961489)
chr5 (52-189)||(9792321-9792460)
chr5 (52-189)||(26716275-26716414)
chr5 (52-189)||(26986015-26986154)
chr5 (75-182)||(41392712-41392821)
chr5 (51-189)||(32728685-32728825)
chr5 (52-189)||(32624879-32625018)
chr5 (197-267)||(16291634-16291704)
chr5 (73-189)||(17138252-17138369)
chr5 (73-189)||(1795394-1795512)
chr5 (71-181)||(3934784-3934896)
chr5 (52-189)||(12852121-12852249)
chr5 (52-125)||(26794981-26795054)
chr5 (52-139)||(34032423-34032510)
chr5 (73-156)||(9653802-9653885)
chr5 (73-174)||(21251482-21251585)
chr5 (83-154)||(22774593-22774664)
chr5 (52-154)||(5722026-5722128)
chr5 (71-181)||(42366099-42366211)
chr5 (52-189)||(5612419-5612558)
chr5 (52-148)||(43357736-43357832)
chr5 (76-151)||(1920878-1920953)
chr5 (95-182)||(41233388-41233477)
chr5 (74-154)||(3701237-3701317)
chr5 (95-189)||(35746271-35746367)
chr5 (14-58)||(41392631-41392675)
chr5 (74-189)||(6243168-6243274)
chr5 (14-57)||(32625033-32625076)
chr5 (52-118)||(7977316-7977382)
chr5 (73-149)||(18001963-18002036)
chr5 (75-148)||(15066183-15066256)
chr5 (75-127)||(7629125-7629177)
chr5 (74-182)||(14836390-14836500)
chr5 (14-57)||(32707750-32707793)
chr5 (75-152)||(12190426-12190503)
chr5 (14-58)||(12852255-12852300)
chr5 (74-139)||(27085418-27085483)
chr5 (72-149)||(35618113-35618190)
chr5 (14-58)||(32728638-32728682)
[»] scaffold0640 (2 HSPs)
scaffold0640 (52-189)||(8069-8208)
scaffold0640 (14-57)||(8011-8054)
[»] chr6 (23 HSPs)
chr6 (52-189)||(1036803-1036942)
chr6 (52-181)||(31195846-31195977)
chr6 (14-189)||(7188708-7188892)
chr6 (51-189)||(3212479-3212619)
chr6 (52-182)||(8356967-8357099)
chr6 (51-189)||(32130635-32130775)
chr6 (55-186)||(25834476-25834609)
chr6 (52-189)||(26327157-26327295)
chr6 (76-189)||(27083987-27084102)
chr6 (73-189)||(234308-234426)
chr6 (75-189)||(3299143-3299259)
chr6 (52-189)||(6708018-6708157)
chr6 (73-182)||(32017986-32018097)
chr6 (121-189)||(10894619-10894688)
chr6 (52-154)||(19128192-19128294)
chr6 (95-185)||(13061325-13061417)
chr6 (14-118)||(31741097-31741209)
chr6 (14-57)||(8357114-8357157)
chr6 (73-151)||(22989332-22989410)
chr6 (73-151)||(23798987-23799065)
chr6 (85-182)||(13607795-13607894)
chr6 (112-189)||(29892968-29893047)
chr6 (132-189)||(31079614-31079673)
[»] scaffold0060 (1 HSPs)
scaffold0060 (52-189)||(30421-30560)
[»] scaffold0112 (1 HSPs)
scaffold0112 (15-189)||(42006-42181)
[»] scaffold0285 (1 HSPs)
scaffold0285 (73-189)||(13252-13370)
[»] scaffold0177 (1 HSPs)
scaffold0177 (51-189)||(25517-25646)
[»] scaffold0037 (1 HSPs)
scaffold0037 (14-189)||(27720-27897)
[»] scaffold0406 (2 HSPs)
scaffold0406 (14-118)||(13931-14041)
scaffold0406 (156-185)||(13872-13901)
[»] scaffold0240 (1 HSPs)
scaffold0240 (73-189)||(10602-10720)
[»] scaffold0005 (2 HSPs)
scaffold0005 (132-189)||(44647-44706)
scaffold0005 (14-117)||(44540-44653)


Alignment Details
Target: chr8 (Bit Score: 127; Significance: 1e-65; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 6028666 - 6028489
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgta 113  Q
    |||||||||||||||||||||| |||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6028666 agaaatcaaaataatataaaaaacacaagtatctgtgcgtatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatatgta 6028567  T
Q  114 tcgggaagtatcaggcaggtatcggtgcagaatacgcaggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||| ||||||| ||||| ||||||||||| ||||||||||   || |||||||||||||||||||||||||||||||    
T  6028566 tcggaaagtatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggctt 6028489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 25022305 - 25022127
Alignment:
Q  14 agaaatcaaaataatataaaaag-cacaagtattcgtgcgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgt 112  Q
    ||||||||||||||||||||||  ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  25022305 agaaatcaaaataatataaaaaaacacaagtatccgtgcgtatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgt 25022206  T
Q  113 atcgggaagtatcaggcaggtatcggtgcagaatacgcagg-ga-acagtacgtcatccattttgaagtatcggggctt 189  Q
    ||| ||||||||| ||||||||||||||||| ||||||||| || || ||| ||||||||||||||||||| |||||||    
T  25022205 atcaggaagtatcgggcaggtatcggtgcaggatacgcaggagatacggtatgtcatccattttgaagtattggggctt 25022127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 32877578 - 32877439
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||    
T  32877578 gtatcggaaaattatttttttaaaaaataaaatttaatatttggatactctcccgatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgca 32877479  T
Q  152 gggaacag--tacgtcatccattttgaagtatcggggctt 189  Q
    ||| | |   ||||||||||||||||||||||||||||||    
T  32877478 ggggatacgatacgtcatccattttgaagtatcggggctt 32877439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 36483624 - 36483437
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcggaa----------aatgattttcttaaaaaataaaatttaatatttggatactctc 103  Q
    ||||||||||||||||||||||  ||||||||||||||||||||| |          ||| ||||| ||||||||||||||||||||||||||||||||     
T  36483624 agaaatcaaaataatataaaaaatacaagtattcgtgcgtatcgggacgtatcggataattatttttttaaaaaataaaatttaatatttggatactctt 36483525  T
Q  104 ccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    | |||| ||||||| ||||||| ||||||||||||||||| ||||||||||   || |||||||||||||||||||||||||||||||    
T  36483524 cggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggctt 36483437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 51 - 189
Target Start/End: Original strand, 2872887 - 2873026
Alignment:
Q  51 cgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgc 150  Q
    ||||||||| ||| ||||| |||||||||||||||| ||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| ||||||    
T  2872887 cgtatcggataatcatttt-ttaaaaaataaaatttcatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgc 2872985  T
Q  151 aggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    ||||   || |||||||||||||||||||||||||||||||    
T  2872986 aggggatacggtacgtcatccattttgaagtatcggggctt 2873026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 16384758 - 16384619
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| |||||||||||||||||||||||||||||||| | |||| ||||||||||||||| ||||||||||||||||| |||| ||    
T  16384758 gtatcggataattatttttttaaaaaataaaatttaatatttggatactcttcggatacgtatcgggaagtatcgggcaggtatcggtgcaggatactca 16384659  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||||||||||||||||||||||||||||||    
T  16384658 ggggatacggtacgtcatccattttgaagtatcggggctt 16384619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 32759514 - 32759375
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| | |||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||    
T  32759514 gtatcggataattattttttaaaaaaataaaatttaatatttggatactctccagatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgca 32759415  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || ||||||||||||||||||||||||| |||||    
T  32759414 ggggatacggtacgtcatccattttgaagtatcgaggctt 32759375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 66 - 189
Target Start/End: Original strand, 28876557 - 28876682
Alignment:
Q  66 ttttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggg--aacagtacg 163  Q
    |||| |||||||||||||||||||||||||||||||||  |||| |||||| |||||||| ||||||||||||||||| ||||||||||   ||||||||    
T  28876557 tttttttaaaaaataaaatttaatatttggatactctctggatacgtatcgagaagtatcgggcaggtatcggtgcaggatacgcaggggatacagtacg 28876656  T
Q  164 tcatccattttgaagtatcggggctt 189  Q
    ||||||||||||||||||||||||||    
T  28876657 tcatccattttgaagtatcggggctt 28876682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 34901359 - 34901498
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| | ||||||||||||||||||||| |||||||||| |||| ||||||| ||||||| ||||||||||||||||| |||||||    
T  34901359 gtatcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgca 34901458  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||||||||||||||||||||||||||||||    
T  34901459 ggggatacggtacgtcatccattttgaagtatcggggctt 34901498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 189
Target Start/End: Complemental strand, 4246127 - 4245942
Alignment:
Q  16 aaatcaaaataatataaaaagcacaagtattcgtgcgtatcggaa----------aatgattttcttaaaaaataaaatttaatatttggatactctccc 105  Q
    |||||||||||||||||||| ||||||||| |||||||||||| |          ||| ||||| |||||||||||||||||||||||||||||||| |     
T  4246127 aaatcaaaataatataaaaaacacaagtatccgtgcgtatcgggatgtatcggataattatttttttaaaaaataaaatttaatatttggatactcttcg 4246028  T
Q  106 gatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||| ||||||||||||||| ||||||||||||||||| ||| ||||||   || |||||||||| ||||||||| ||||||||||    
T  4246027 gatacgtatcgggaagtatcgggcaggtatcggtgcaggatatgcaggggatacggtacgtcatctattttgaagcatcggggctt 4245942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 75 - 189
Target Start/End: Complemental strand, 13422326 - 13422210
Alignment:
Q  75 aaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggg--aacagtacgtcatccatt 172  Q
    ||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||| ||| ||||||   || ||||||||||||||    
T  13422326 aaaataaaatttaatatttggatactctccgtatacgtatcgggaagtatcaggcaggtatcggtgcaggatatgcaggggatacggtacgtcatccatt 13422227  T
Q  173 ttgaagtatcggggctt 189  Q
    |||||||||||||||||    
T  13422226 ttgaagtatcggggctt 13422210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 52 - 185
Target Start/End: Original strand, 22201314 - 22201449
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| | |||||||||||||||||||||||||||||||| |||| ||||||| ||||||| ||||||||||||||||| |||||||    
T  22201314 gtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgca 22201413  T
Q  152 gggaacag--tacgtcatccattttgaagtatcggg 185  Q
    ||| | |   ||||||||||||||||||||||||||    
T  22201414 ggggatacgatacgtcatccattttgaagtatcggg 22201449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 54 - 189
Target Start/End: Original strand, 19947976 - 19948112
Alignment:
Q  54 atcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagg 153  Q
    |||||||||| |||||||||||||||||| || |||||||||||||||||||| || |||||||||||||||  |||||||||||||||| |||||||||    
T  19947976 atcggaaaattattttcttaaaaaataaagtt-aatatttggatactctcccggtacgtatcgggaagtatcgagcaggtatcggtgcaggatacgcagg 19948074  T
Q  154 gaaca--gtacgtcatccattttgaagtatcggggctt 189  Q
    | | |   ||||||||||||||||||||||| ||||||    
T  19948075 ggatatgatacgtcatccattttgaagtatcagggctt 19948112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 52 - 186
Target Start/End: Original strand, 43771681 - 43771817
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| || ||||||||||||||||||||||||||||||| |||| ||||| ||||||||| | || |||||||||||| |||||||    
T  43771681 gtatcggataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcaggaagtatcggacatgtatcggtgcaggatacgca 43771780  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcgggg 186  Q
    |||   || ||||||||||||||||||||||||||||    
T  43771781 ggggatacggtacgtcatccattttgaagtatcgggg 43771817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 73 - 189
Target Start/End: Original strand, 12580551 - 12580669
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagg-ga-acagtacgtcatcca 170  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||| ||||||||||| ||||||||| || || |||| ||||| |    
T  12580551 aaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcagacagttatcggtgcaggatacgcaggagatacggtacatcatcta 12580650  T
Q  171 ttttgaagtatcggggctt 189  Q
    |||||||||||||||||||    
T  12580651 ttttgaagtatcggggctt 12580669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 51 - 186
Target Start/End: Complemental strand, 37668724 - 37668587
Alignment:
Q  51 cgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgc 150  Q
    ||||||||| ||| ||||| | |||||||||||||||||||||||||| | |||  ||||||||||||||||||||| ||| ||| ||||||  ||||||    
T  37668724 cgtatcggataattattttttaaaaaaataaaatttaatatttggatattatccgtatatgtatcgggaagtatcagacagatattggtgcaagatacgc 37668625  T
Q  151 aggga--acagtacgtcatccattttgaagtatcgggg 186  Q
    |||||  || ||||||||||||||||||||||||||||    
T  37668624 agggaatacggtacgtcatccattttgaagtatcgggg 37668587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 189
Target Start/End: Original strand, 45217149 - 45217336
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcggaa----------aatgattttcttaaaaaataaaatttaatatttggatactctc 103  Q
    ||||||||||||||||||||||  |||||||| |||||||||||| |          ||| ||||| |||||||||||||||||||||||||||||||||    
T  45217149 agaaatcaaaataatataaaaaatacaagtatccgtgcgtatcgggatgtatcggataattatttttttaaaaaataaaatttaatatttggatactctc 45217248  T
Q  104 ccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagggaa--cagtacgtcatccattttgaagtatcggggctt 189  Q
    | |||| ||||||| || |||| | ||||||||||||||| |||||||||| |  || ||  ||||||||||| ||||||||||||||    
T  45217249 cggatacgtatcggaaaatatcggacaggtatcggtgcaggatacgcaggggatacaatatatcatccattttaaagtatcggggctt 45217336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 52 - 184
Target Start/End: Complemental strand, 32425062 - 32424928
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgc- 150  Q
    |||||||| ||| ||||| || |||||||||||||||| || ||||||||| | |||| |||||| |||||||||| ||||||||||||||| ||||||     
T  32425062 gtatcggataattattttttttaaaaataaaatttaatcttcggatactcttctgatacgtatcgtgaagtatcagacaggtatcggtgcaggatacgca 32424963  T
Q  151 aggga-acagtacgtcatccattttgaagtatcgg 184  Q
    ||||| || ||||||||||||||||||||||||||    
T  32424962 agggatacggtacgtcatccattttgaagtatcgg 32424928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 65 - 185
Target Start/End: Complemental strand, 27886318 - 27886196
Alignment:
Q  65 attttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggga--acagtac 162  Q
    ||||| || ||||||||| |||||| || ||||||||||| |||| ||||||||||||||||  ||||||||||||||| ||| |||||||  ||| |||    
T  27886318 attttttttaaaaataaactttaatcttcggatactctcctgatacgtatcgggaagtatcaaccaggtatcggtgcaggatatgcagggaatacaatac 27886219  T
Q  163 gtcatccattttgaagtatcggg 185  Q
    |||||||||||||||||||||||    
T  27886218 gtcatccattttgaagtatcggg 27886196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 65 - 185
Target Start/End: Complemental strand, 27944976 - 27944854
Alignment:
Q  65 attttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggga--acagtac 162  Q
    ||||| || ||||||||| |||||| || ||||||||||| |||| ||||||||||||||||  ||||||||||||||| ||| |||||||  ||| |||    
T  27944976 attttttttaaaaataaactttaatcttcggatactctcctgatacgtatcgggaagtatcaaccaggtatcggtgcaggatatgcagggaatacaatac 27944877  T
Q  163 gtcatccattttgaagtatcggg 185  Q
    |||||||||||||||||||||||    
T  27944876 gtcatccattttgaagtatcggg 27944854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 143
Target Start/End: Complemental strand, 42949264 - 42949180
Alignment:
Q  59 aaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcag 143  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||| ||| |||||||||||    
T  42949264 aaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcgaaaagtatcagacagatatcggtgcag 42949180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 19436440 - 19436276
Alignment:
Q  14 agaaatcaaaataatataaaaagc-acaagtattcgtgcgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgt 112  Q
    ||||||||||||||||||||||   |||||||| | |||||||||| |||| ||||||||||||||||||||||||||||||              | ||    
T  19436440 agaaatcaaaataatataaaaaaatacaagtatccatgcgtatcgggaaattattttcttaaaaaataaaatttaatatttg--------------aagt 19436355  T
Q  113 atcgggaagtatcaggcaggtatcggtgcagaatacgc-aggga-acagtacgtcatccattttgaagtatcggggctt 189  Q
    ||||||||||||| | ||||||||||||||| |||||| ||||| || |||||||||||||||||||||||||| ||||    
T  19436354 atcgggaagtatcggtcaggtatcggtgcaggatacgcaagggatacggtacgtcatccattttgaagtatcggagctt 19436276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 19572589 - 19572425
Alignment:
Q  14 agaaatcaaaataatataaaaagc-acaagtattcgtgcgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgt 112  Q
    ||||||||||||||||||||||   |||||||| | |||||||||| |||| ||||||||||||||||||||||||||||||              | ||    
T  19572589 agaaatcaaaataatataaaaaaatacaagtatccatgcgtatcgggaaattattttcttaaaaaataaaatttaatatttg--------------aagt 19572504  T
Q  113 atcgggaagtatcaggcaggtatcggtgcagaatacgc-aggga-acagtacgtcatccattttgaagtatcggggctt 189  Q
    ||||||||||||| | ||||||||||||||| |||||| ||||| || |||||||||||||||||||||||||| ||||    
T  19572503 atcgggaagtatcggtcaggtatcggtgcaggatacgcaagggatacggtacgtcatccattttgaagtatcggagctt 19572425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 76 - 189
Target Start/End: Complemental strand, 37372376 - 37372261
Alignment:
Q  76 aaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagg-ga-acagtacgtcatccattt 173  Q
    |||||||||||||| || ||||||||||| |||| ||||||||||||||||| |||||||| |||||| ||||||||| || ||  ||||||||||||||    
T  37372376 aaataaaatttaatcttcggatactctcctgatacgtatcgggaagtatcagacaggtatcagtgcaggatacgcaggagatacgatacgtcatccattt 37372277  T
Q  174 tgaagtatcggggctt 189  Q
    ||||||||||| ||||    
T  37372276 tgaagtatcggagctt 37372261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 185
Target Start/End: Complemental strand, 27968246 - 27968109
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatac--tctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacg 149  Q
    ||||| || ||| ||||| |||||||||||| |||||| || ||||||  ||||| |||| ||||||||||||||||| ||||||||||||||| ||| |    
T  27968246 gtatcagataattatttttttaaaaaataaactttaatcttcggatacgatctcctgatacgtatcgggaagtatcagccaggtatcggtgcaggatatg 27968147  T
Q  150 caggga--acagtacgtcatccattttgaagtatcggg 185  Q
    ||||||  ||| ||||||||| ||||| ||||||||||    
T  27968146 cagggaatacaatacgtcatctatttttaagtatcggg 27968109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 185
Target Start/End: Complemental strand, 28025232 - 28025095
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatac--tctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacg 149  Q
    ||||| || ||| ||||| |||||||||||| |||||| || ||||||  ||||| |||| ||||||||||||||||| ||||||||||||||| ||| |    
T  28025232 gtatcagataattatttttttaaaaaataaactttaatcttcggatacgatctcctgatacgtatcgggaagtatcagccaggtatcggtgcaggatatg 28025133  T
Q  150 caggga--acagtacgtcatccattttgaagtatcggg 185  Q
    ||||||  ||| ||||||||| ||||| ||||||||||    
T  28025132 cagggaatacaatacgtcatctatttttaagtatcggg 28025095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 51 - 186
Target Start/End: Original strand, 5818287 - 5818424
Alignment:
Q  51 cgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgc 150  Q
    |||||| || ||| ||||| || |||||||||||||||| ||  |||||||||| ||||  ||||||||| ||||| |||||||||||||||| ||||||    
T  5818287 cgtatcagataattattttttttaaaaataaaatttaatcttcagatactctcctgatacatatcgggaaatatcatgcaggtatcggtgcaggatacgc 5818386  T
Q  151 -aggga-acagtacgtcatccattttgaagtatcgggg 186  Q
     || || ||  |||||||||||||||||||||||||||    
T  5818387 aagtgatacgatacgtcatccattttgaagtatcgggg 5818424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 52 - 182
Target Start/End: Original strand, 32638843 - 32638965
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    ||||| || ||| ||||| |||||||||||||||||||||||||||||||||| |||| ||||||          ||||||||||||||||| |||||||    
T  32638843 gtatcagataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcg----------ggcaggtatcggtgcaggatacgca 32638932  T
Q  152 ggg--aacagtacgtcatccattttgaagtatc 182  Q
    |||   || ||||||||||||||||||||||||    
T  32638933 ggggatacggtacgtcatccattttgaagtatc 32638965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 185
Target Start/End: Complemental strand, 5539541 - 5539441
Alignment:
Q  76 aaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggga-acagtacgtcatccatttt 174  Q
    ||||||||||||||||||||||||||||| ||||  |||||||          ||||||||||||||| ||||||||||| ||||||| |||||||||||    
T  5539541 aaataaaatttaatatttggatactctccggatacatatcggg----------caggtatcggtgcaggatacgcagggatacagtacatcatccatttt 5539452  T
Q  175 gaagtatcggg 185  Q
    |||||||||||    
T  5539451 gaagtatcggg 5539441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 186
Target Start/End: Complemental strand, 38388787 - 38388672
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcag-gga-acagtacgtcatcca 170  Q
    ||||||||||||||||| || ||||||| ||| || | |||||| |||||||| | ||||||||||||||| |||||||| ||| ||| |||  ||||||    
T  38388787 aaaaaataaaatttaatcttcggatactttcctgacacgtatcgagaagtatcggacaggtatcggtgcaggatacgcagaggatacaatacagcatcca 38388688  T
Q  171 ttttgaagtatcgggg 186  Q
    ||||||||||||||||    
T  38388687 ttttgaagtatcgggg 38388672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 66 - 189
Target Start/End: Complemental strand, 29355750 - 29355625
Alignment:
Q  66 ttttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagggaaca--gtacg 163  Q
    |||| ||||||| ||||||||||| || ||||||||||| | || |||||||||||||||| |||| ||||| ||||| |||| ||||| | |   || |    
T  29355750 tttttttaaaaattaaaatttaatcttcggatactctcctgctacgtatcgggaagtatcaagcagctatcgatgcaggatacccaggggatatgatatg 29355651  T
Q  164 tcatccattttgaagtatcggggctt 189  Q
    ||||||||||||||||||| ||||||    
T  29355650 tcatccattttgaagtatcagggctt 29355625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 12580472 - 12580516
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcgg 58  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||    
T  12580472 agaaatcaaaataatataaaaaacacaagtatccgtgcgtatcgg 12580516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 17702616 - 17702549
Alignment:
Q  72 taaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggt 139  Q
    |||||||||||||||||| ||  ||||||||||||||| |||||| | |||||| || ||||||||||    
T  17702616 taaaaaataaaatttaattttcagatactctcccgatacgtatcgaggagtatcgggaaggtatcggt 17702549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 121
Target Start/End: Complemental strand, 12357998 - 12357950
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaag 121  Q
    |||||||||||||||||||||||||||| | | |||| |||||||||||    
T  12357998 aaaaaataaaatttaatatttggatactatgctgatacgtatcgggaag 12357950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 121
Target Start/End: Complemental strand, 12359126 - 12359078
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaag 121  Q
    |||||||||||||||||||||||||||| | | |||| |||||||||||    
T  12359126 aaaaaataaaatttaatatttggatactatgctgatacgtatcgggaag 12359078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 32759572 - 32759528
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcgg 58  Q
    ||||||||||||||||||||||  |||||||| ||||||||||||    
T  32759572 agaaatcaaaataatataaaaaatacaagtatccgtgcgtatcgg 32759528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 5539616 - 5539569
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcggaaa 61  Q
    |||||||||||||||||||||| |||||||||  |||||||||| |||    
T  5539616 agaaatcaaaataatataaaaaacacaagtatctgtgcgtatcgaaaa 5539569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 8171127 - 8171174
Alignment:
Q  14 agaaatcaaaataatat-aaaaagcacaagtattcgtgcgtatcggaa 60  Q
    ||||||||||||||||| ||||| |||| |||||||||||||||||||    
T  8171127 agaaatcaaaataatataaaaaaacacacgtattcgtgcgtatcggaa 8171174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 185
Target Start/End: Complemental strand, 20182514 - 20182380
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||  ||| ||||| ||||||| ||||||||||| ||  |||||||| | |||| ||||||  ||||||||| ||| |||  |||||| ||| |||    
T  20182514 gtatcggttaattatttttttaaaaattaaaatttaatcttcagatactctactgatacgtatcgaaaagtatcagacagatat-agtgcaggatatgca 20182416  T
Q  152 -ggga-acagtacgtcatccattttgaagtatcggg 185  Q
     |||| || ||||||||||||| |||||||||||||    
T  20182415 cgggataccgtacgtcatccatcttgaagtatcggg 20182380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 23265768 - 23265689
Alignment:
Q  74 aaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagg 153  Q
    ||||| |||| ||||| || ||||||||||| |||| |||||||||| |||  | ||| |||| ||||||||||||||||    
T  23265768 aaaaaaaaaaattaatcttcggatactctcctgatacgtatcgggaaatattggacagatatcagtgcagaatacgcagg 23265689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 99
Target Start/End: Complemental strand, 40412555 - 40412508
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatac 99  Q
    |||||||| ||| ||||| |||||||||||||||||||||| ||||||    
T  40412555 gtatcggataattatttttttaaaaaataaaatttaatattcggatac 40412508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 13422408 - 13422363
Alignment:
Q  14 agaaatcaaaataatata-aaaagcacaagtattcgtgcgtatcgg 58  Q
    |||||||||||||||||| |||| ||||||||| ||||||||||||    
T  13422408 agaaatcaaaataatataaaaaaacacaagtatccgtgcgtatcgg 13422363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 16384817 - 16384772
Alignment:
Q  14 agaaatcaaaataatata-aaaagcacaagtattcgtgcgtatcgg 58  Q
    |||||||||||||||||| |||| ||||||||| ||||||||||||    
T  16384817 agaaatcaaaataatataaaaaaacacaagtatccgtgcgtatcgg 16384772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 119; Significance: 7e-61; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 14 - 189
Target Start/End: Original strand, 4170441 - 4170618
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgta 113  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||| ||| ||||| || ||||||||||||||||||||||||||||||| |||| |||    
T  4170441 agaaatcaaaataatataaaaaacacaagtatccgtgcgtatcggataattattttttttaaaaataaaatttaatatttggatactctccggatacgta 4170540  T
Q  114 tcgggaagtatcaggcaggtatcggtgcagaatacgcaggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||||||||||||||||||||||||||||| ||||||||||   || |||||||||||||||||||||||||| ||||    
T  4170541 tcgggaagtatcaggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggagctt 4170618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 14 - 185
Target Start/End: Original strand, 6497588 - 6497761
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgta 113  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||| |||| |||    
T  6497588 agaaataaaaataatataaaaaatacaagtatccgtgcgtatcggataattatttttttaaaaaataaaatttaatatttggatactctccggatacgta 6497687  T
Q  114 tcgggaagtatcaggcaggtatcggtgcagaatacgcaggg--aacagtacgtcatccattttgaagtatcggg 185  Q
    |||||||| ||||| ||||||||||||||| ||||||||||   || |||||||||||||||||||||||||||    
T  6497688 tcgggaagaatcagacaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggg 6497761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 7876855 - 7876716
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||    
T  7876855 gtatcggataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgca 7876756  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||||||||||||||||||||||||||||||    
T  7876755 ggggatacggtacgtcatccattttgaagtatcggggctt 7876716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 54 - 189
Target Start/End: Complemental strand, 16561939 - 16561802
Alignment:
Q  54 atcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgc-ag 152  Q
    |||||| ||| ||||| | |||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||| ||    
T  16561939 atcggacaattattttataaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcagaatacgcaag 16561840  T
Q  153 gga-acagtacgtcatccattttgaagtatcggggctt 189  Q
    ||| || |||||||||||||||||||||||||||||||    
T  16561839 ggatacggtacgtcatccattttgaagtatcggggctt 16561802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 18301113 - 18300974
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||| ||    
T  18301113 gtatcgaaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcgagaagtatcagacaggtatcggtgcagaatacaca 18301014  T
Q  152 gggaacag--tacgtcatccattttgaagtatcggggctt 189  Q
    ||| | |   ||||||||||||||||||||||| ||||||    
T  18301013 ggggatacgatacgtcatccattttgaagtatcagggctt 18300974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 38602299 - 38602438
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    ||||| || ||| ||||| || ||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||    
T  38602299 gtatcagataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgca 38602398  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||||||||||||||||||||||||||||||    
T  38602399 ggggatacggtacgtcatccattttgaagtatcggggctt 38602438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 40308874 - 40309013
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| || ||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||    
T  40308874 gtatcggataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgca 40308973  T
Q  152 -ggga-acagtacgtcatccattttgaagtatcggggctt 189  Q
     |||| || |||||||||| ||||||||||||||||||||    
T  40308974 tgggatacggtacgtcatctattttgaagtatcggggctt 40309013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 4355466 - 4355327
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| | ||| ||||||||||||||||||| |||| ||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||    
T  4355466 gtatcggataattagttttttaaaaaataaaatttaatctttgcatactctcctgatacgtatcgggaagtatcaagcaggtatcggtgcagaatacgca 4355367  T
Q  152 ggga--acagtacgtcatccattttgaagtatcggggctt 189  Q
    ||||  ||  |||||||||||||||||||||||| |||||    
T  4355366 gggaatacgatacgtcatccattttgaagtatcgaggctt 4355327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 33324959 - 33324820
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    ||||| || ||| ||||| || ||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||    
T  33324959 gtatcagataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgca 33324860  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||| ||||||||||||||||||||||||||    
T  33324859 ggggatacggtacatcatccattttgaagtatcggggctt 33324820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 22484408 - 22484269
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| | |||||||||||||||||||||||||||||||| |||| ||||||||||||||| | ||| ||||| ||||| |||||||    
T  22484408 gtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcggacagatatcgatgcaggatacgca 22484309  T
Q  152 ggga--acagtacgtcatccattttgaagtatcggggctt 189  Q
    ||||  || |||| ||||||||||||||||||||||||||    
T  22484308 gggaatacggtacatcatccattttgaagtatcggggctt 22484269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 6124314 - 6124175
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| |||||||||||||||||||||||||||||||||| |||| ||||| ||||||||| | || |||||||||||| |||| ||    
T  6124314 gtatcggataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcaggaagtatcggacatgtatcggtgcaggatacaca 6124215  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   ||| ||||||||||||||| ||||||||||||||    
T  6124214 ggggatacaatacgtcatccattttaaagtatcggggctt 6124175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 34146321 - 34146182
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| || |||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||    
T  34146321 gtatcggataattattttttttaaaaataaaatttaatctttggatactctcctgatacgtatcgggaagtatcaggcagatatcggtgcagaatacgca 34146222  T
Q  152 g--ggaacagtacgtcatccattttgaagtatcggggctt 189  Q
    |  |  ||  ||||||||||||||| ||||||||| ||||    
T  34146221 gaagatacgatacgtcatccattttaaagtatcggagctt 34146182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 76 - 189
Target Start/End: Complemental strand, 22571054 - 22570939
Alignment:
Q  76 aaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcag-gga-acagtacgtcatccattt 173  Q
    |||||||||||||||||||||||||| || |||| ||||| ||||||||| ||||||||||||||||| |||||||| ||| || |||||||||| ||||    
T  22571054 aaataaaatttaatatttggatactccccggatacgtatcaggaagtatcgggcaggtatcggtgcaggatacgcagaggatacggtacgtcatctattt 22570955  T
Q  174 tgaagtatcggggctt 189  Q
    ||||||||| ||||||    
T  22570954 tgaagtatctgggctt 22570939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 24585650 - 24585532
Alignment:
Q  72 taaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggga-acagtacgtcatcca 170  Q
    ||||||| |||| ||||| ||||||||| |||| |||| ||||| ||||||||||| ||||||||||||||| ||||||||||| ||  ||| |||||||    
T  24585650 taaaaaaaaaaaattaatctttggatacactcctgatacgtatctggaagtatcagacaggtatcggtgcaggatacgcagggatacgatacatcatcca 24585551  T
Q  171 ttttgaagtatcggggctt 189  Q
    |||||||||||||||||||    
T  24585550 ttttgaagtatcggggctt 24585532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 74 - 185
Target Start/End: Complemental strand, 35342436 - 35342323
Alignment:
Q  74 aaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgc-aggga-acagtacgtcatccat 171  Q
    |||||||||||||||| || |||||||||   |||| |||||||||||||||||| |||||||||||||| |||||| ||||| || |||||||||||||    
T  35342436 aaaaataaaatttaatcttcggatactcttttgatacgtatcgggaagtatcaggtaggtatcggtgcaggatacgcaagggatacggtacgtcatccat 35342337  T
Q  172 tttgaagtatcggg 185  Q
    ||||||||||||||    
T  35342336 tttgaagtatcggg 35342323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 7807351 - 7807490
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| | | ||||| | |||||||||||||||||||||||||||| ||| |||| |||||||||||||||   ||||||||||| ||  |||||||    
T  7807351 gtatcggatagttattttttaaaaaaataaaatttaatatttggatactttccggatacgtatcgggaagtatcgaacaggtatcggtacaagatacgca 7807450  T
Q  152 gggaacag--tacgtcatccattttgaagtatcggggctt 189  Q
    ||| | |   ||||||||||||||||||||||||||||||    
T  7807451 ggggatacgatacgtcatccattttgaagtatcggggctt 7807490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 73 - 181
Target Start/End: Complemental strand, 4561908 - 4561798
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggga--acagtacgtcatcca 170  Q
    ||||||||||||||||| || ||||||||| | |||||||||||||||||||| ||||||||||||||||| |||| || |||  ||  |||||||||||    
T  4561908 aaaaaataaaatttaatcttcggatactcttctgatatgtatcgggaagtatcgggcaggtatcggtgcaggatacacaaggaatacgatacgtcatcca 4561809  T
Q  171 ttttgaagtat 181  Q
    |||||||||||    
T  4561808 ttttgaagtat 4561798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 73 - 189
Target Start/End: Original strand, 14217152 - 14217270
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggg--aacagtacgtcatcca 170  Q
    |||||| |||||||||| ||| |||||||||| |||| ||||||| ||||||||  ||| ||||||||||||||||||||||   ||| |||||||||||    
T  14217152 aaaaaaaaaaatttaatctttagatactctccagatacgtatcggaaagtatcaaacagatatcggtgcagaatacgcaggggatacaatacgtcatcca 14217251  T
Q  171 ttttgaagtatcggggctt 189  Q
    |||||||||||||| ||||    
T  14217252 ttttgaagtatcggagctt 14217270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 51 - 186
Target Start/End: Complemental strand, 2319417 - 2319280
Alignment:
Q  51 cgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgc 150  Q
    ||||||||| ||| ||||| | ||||||||||||||||| || ||||||||| | |||| ||||| |||||||||| ||| |||||||||||  ||||||    
T  2319417 cgtatcggataattattttttaaaaaaataaaatttaatcttcggatactcttctgatacgtatcaggaagtatcaagcaagtatcggtgcaagatacgc 2319318  T
Q  151 agggaacag--tacgtcatccattttgaagtatcgggg 186  Q
    |||| | |   |||||||||||||||||||||||||||    
T  2319317 aggggatacgatacgtcatccattttgaagtatcgggg 2319280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 189
Target Start/End: Original strand, 1776427 - 1776552
Alignment:
Q  66 ttttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgc-aggga-acagtacg 163  Q
    |||| ||||||||||||||||||| || ||||||||| | |||| ||||||| ||  ||| |||||||||||||||||||||||| ||||| ||  ||||    
T  1776427 tttttttaaaaaataaaatttaatcttcggatactcttctgatacgtatcggaaatgatcgggcaggtatcggtgcagaatacgcaagggatacgatacg 1776526  T
Q  164 tcatccattttgaagtatcggggctt 189  Q
    ||| ||||||||||||||||||||||    
T  1776527 tcaaccattttgaagtatcggggctt 1776552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 52 - 190
Target Start/End: Original strand, 8482894 - 8483034
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgc- 150  Q
    |||||||| ||| ||||| | ||||||||||||||||| || ||||||||| | |||| ||||||| ||||||||| ||| ||||||||||| ||||||     
T  8482894 gtatcggataattattttttaaaaaaataaaatttaatcttcggatactcttctgatacgtatcggaaagtatcagacagatatcggtgcaggatacgca 8482993  T
Q  151 -agggaacagtacgtcatccattttgaagtatcggggcttt 190  Q
     |||  ||  |||||||| ||||||||||||||||| ||||    
T  8482994 aaggatacgatacgtcattcattttgaagtatcgggacttt 8483034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 186
Target Start/End: Complemental strand, 44156717 - 44156602
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagggaacag--tacgtcatcca 170  Q
    ||||||||||||||||| || ||||||||||| |||| ||||||||||||||||| || |||||| ||||  |||||||||| | |   || ||||||||    
T  44156717 aaaaaataaaatttaatcttcggatactctcctgatacgtatcgggaagtatcagacatgtatcgatgcatgatacgcaggggatacgatatgtcatcca 44156618  T
Q  171 ttttgaagtatcgggg 186  Q
    ||||||||||||||||    
T  44156617 ttttgaagtatcgggg 44156602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 73 - 189
Target Start/End: Original strand, 31236184 - 31236302
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggg--aacagtacgtcatcca 170  Q
    ||||| ||||||||||| || ||||||||||| |||| |||||||||| ||||| |||||| | ||||||| ||||||||||   ||| ||||| |||||    
T  31236184 aaaaattaaaatttaatcttcggatactctcctgatacgtatcgggaaatatcatgcaggtgtgggtgcaggatacgcaggggatacaatacgttatcca 31236283  T
Q  171 ttttgaagtatcggggctt 189  Q
    |||| ||||||||||||||    
T  31236284 ttttaaagtatcggggctt 31236302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 40497384 - 40497486
Alignment:
Q  74 aaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagggaaca--gtacgtcatccat 171  Q
    |||||||||||||||| |||||||||||||| |||| ||||||||||||||||| ||||||||  ||||  |||||||||| | |  |||||||||||||    
T  40497384 aaaaataaaatttaatctttggatactctcctgatacgtatcgggaagtatcagacaggtatcactgcaagatacgcaggggataaggtacgtcatccat 40497483  T
Q  172 ttt 174  Q
    |||    
T  40497484 ttt 40497486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 189
Target Start/End: Original strand, 28746648 - 28746768
Alignment:
Q  71 ttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagggaacag--tacgtcatc 168  Q
    |||||||| |||| ||||| || ||||||||| | |||| ||||||  ||||||| ||||||||||||||||| |||||||||| | |   ||||||| |    
T  28746648 ttaaaaaaaaaaaattaatcttcggatactcttctgatacgtatcgaaaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcaac 28746747  T
Q  169 cattttgaagtatcggggctt 189  Q
    |||||||||||||||||||||    
T  28746748 cattttgaagtatcggggctt 28746768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 51 - 189
Target Start/End: Complemental strand, 20536907 - 20536777
Alignment:
Q  51 cgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgc 150  Q
    ||||||||||| | ||||| || ||||||||||||||||||||||||||||| |||||| ||||||          |||| |||||||||||| ||| ||    
T  20536907 cgtatcggaaatttattttttttaaaaataaaatttaatatttggatactcttccgatacgtatcg----------ggcaagtatcggtgcaggatatgc 20536818  T
Q  151 aggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    ||||   ||  ||||||||||||||||||||||||||||||    
T  20536817 aggggatacgatacgtcatccattttgaagtatcggggctt 20536777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 37134299 - 37134415
Alignment:
Q  76 aaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcag-gga-acagtacgtcatccattt 173  Q
    |||||||||||||| ||   ||||||||  |||| |||||||||||||||| |||| |||| |||||| |||||||| ||| || |||||||||| ||||    
T  37134299 aaataaaatttaatcttcatatactctcttgatacgtatcgggaagtatcaagcagatatcagtgcaggatacgcagaggatacggtacgtcatctattt 37134398  T
Q  174 tgaagtatcggggcttt 190  Q
    ||||||||| |||||||    
T  37134399 tgaagtatctgggcttt 37134415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 183
Target Start/End: Complemental strand, 35996783 - 35996651
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| ||||||||||||||||||| || | ||||||||| |||| ||||||  |||||||   ||||||||||||||  |||||||    
T  35996783 gtatcggataattatttt-ttaaaaaataaaatttaatcttcgaatactctcctgatacgtatcgaaaagtatcgaacaggtatcggtgcaagatacgca 35996685  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcg 183  Q
    |||   ||| ||| |||| |||||||||||||||    
T  35996684 ggggatacaatacatcattcattttgaagtatcg 35996651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 76 - 182
Target Start/End: Complemental strand, 1005629 - 1005522
Alignment:
Q  76 aaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagggaacag--tacgtcatccattt 173  Q
    |||||||||||||| ||  |||||||| |  ||| ||||||||||||||| | ||||||||||||||| |||||||||| | |   ||||||||||||||    
T  1005629 aaataaaatttaatcttcagatactcttctaatacgtatcgggaagtatc-gacaggtatcggtgcaggatacgcaggggatacgatacgtcatccattt 1005531  T
Q  174 tgaagtatc 182  Q
    |||||||||    
T  1005530 tgaagtatc 1005522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 183
Target Start/End: Original strand, 3545581 - 3545691
Alignment:
Q  75 aaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacg--cagggaacagtacgtcatccatt 172  Q
    ||||||||||||||| || |||| |||||| ||||  ||||| |||||||||| || ||||||||||||||||||   | |  ||  |||||||||||||    
T  3545581 aaaataaaatttaatcttcggatgctctcctgatacatatcgagaagtatcagacaagtatcggtgcagaatacgtaaaagatacgatacgtcatccatt 3545680  T
Q  173 ttgaagtatcg 183  Q
    |||||||||||    
T  3545681 ttgaagtatcg 3545691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 7807293 - 7807337
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcgg 58  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||    
T  7807293 agaaatcaaaataatataaaaaacacaagtatccgtgcgtatcgg 7807337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 7876913 - 7876869
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcgg 58  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||    
T  7876913 agaaatcaaaataatataaaaaacacaagtatccgtgcgtatcgg 7876869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 3563957 - 3563906
Alignment:
Q  76 aaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcag 127  Q
    |||||||||||||| || ||||||||||| |||| |||||||||||||||||    
T  3563957 aaataaaatttaatcttcggatactctcctgatacgtatcgggaagtatcag 3563906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 90
Target Start/End: Complemental strand, 5371096 - 5371057
Alignment:
Q  51 cgtatcggaaaatgattttcttaaaaaataaaatttaata 90  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  5371096 cgtatcggaaaattattttcttaaaaaataaaatttaata 5371057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 189
Target Start/End: Complemental strand, 5588208 - 5588109
Alignment:
Q  92 ttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcag-gga-acagtacgtcatccattttgaagtatcggggctt 189  Q
    ||||||||||||  |||||||||| |||||||| || ||||||||||||||  ||||  || ||| ||  ||||||||||||||||||||||||| ||||    
T  5588208 ttggatactctcatgatatgtatcaggaagtatgagacaggtatcggtgcaagatacaaagaggatacgatacgtcatccattttgaagtatcggagctt 5588109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 181
Target Start/End: Complemental strand, 25933685 - 25933575
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagggaacag--tacgtcatcca 170  Q
    ||||||| ||||||||| || ||||||||||| ||| ||||||| ||||||||||  || ||| ||||||  |||||||||| | |   ||| |||||||    
T  25933685 aaaaaattaaatttaatcttcggatactctcctgatctgtatcgagaagtatcagatagatattggtgcatgatacgcaggggatacgatacatcatcca 25933586  T
Q  171 ttttgaagtat 181  Q
    |||||||||||    
T  25933585 ttttgaagtat 25933575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 58
Target Start/End: Complemental strand, 18301169 - 18301127
Alignment:
Q  16 aaatcaaaataatataaaaagcacaagtattcgtgcgtatcgg 58  Q
    |||||||||||||||||||| ||||||||| ||||||||||||    
T  18301169 aaatcaaaataatataaaaaacacaagtatccgtgcgtatcgg 18301127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 58
Target Start/End: Complemental strand, 22571135 - 22571093
Alignment:
Q  16 aaatcaaaataatataaaaagcacaagtattcgtgcgtatcgg 58  Q
    |||||||||||||||||||| ||||||||| ||||||||||||    
T  22571135 aaatcaaaataatataaaaaacacaagtatccgtgcgtatcgg 22571093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 16561999 - 16561958
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtat 55  Q
    |||||||||||||||||||||| ||||||||| |||||||||    
T  16561999 agaaatcaaaataatataaaaaacacaagtatccgtgcgtat 16561958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 121
Target Start/End: Original strand, 45158134 - 45158179
Alignment:
Q  76 aaataaaatttaatatttggatactctcccgatatgtatcgggaag 121  Q
    ||||||||||||||  | ||||||||||||||||||||||||||||    
T  45158134 aaataaaatttaattgtcggatactctcccgatatgtatcgggaag 45158179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 33325017 - 33324974
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcg 57  Q
    |||||||||||||||||||| | ||||||||| |||||||||||    
T  33325017 agaaatcaaaataatataaagaacacaagtatccgtgcgtatcg 33324974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 38602241 - 38602284
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcg 57  Q
    |||||||||||||||||||| | ||||||||| |||||||||||    
T  38602241 agaaatcaaaataatataaagaacacaagtatccgtgcgtatcg 38602284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 21104602 - 21104484
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcag-gga-acagtacgtcatcca 170  Q
    ||||| || |||||||| || ||||||||    |||| |||||||||| |||||| ||| ||||||||||  |||||||| ||| ||  |||||||||||    
T  21104602 aaaaagtataatttaatcttcggatactcctttgatacgtatcgggaaatatcagacagatatcggtgcaagatacgcagaggatacgatacgtcatcca 21104503  T
Q  171 ttttgaagtatcggggctt 189  Q
    |||| |||||| |||||||    
T  21104502 ttttaaagtattggggctt 21104484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 182
Target Start/End: Complemental strand, 43214682 - 43214581
Alignment:
Q  85 ttaatatttggatactctcccgatat--gtatcgggaagtatcaggcaggtatcggtgcagaatacgca-ggga-acagtacgtcatccattttgaagta 180  Q
    ||||| || ||||||||||| |||||  ||||||||||||||| | ||| ||||| ||||| |||| || |||| ||  |||||||||||||||||||||    
T  43214682 ttaatcttcggatactctcctgatatatgtatcgggaagtatcggtcagatatcgatgcaggatacacatgggatacgatacgtcatccattttgaagta 43214583  T
Q  181 tc 182  Q
    ||    
T  43214582 tc 43214581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 189
Target Start/End: Complemental strand, 3563882 - 3563853
Alignment:
Q  160 tacgtcatccattttgaagtatcggggctt 189  Q
    ||||||||||||||||||||||||||||||    
T  3563882 tacgtcatccattttgaagtatcggggctt 3563853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 189
Target Start/End: Original strand, 45159385 - 45159414
Alignment:
Q  160 tacgtcatccattttgaagtatcggggctt 189  Q
    ||||||||||||||||||||||||||||||    
T  45159385 tacgtcatccattttgaagtatcggggctt 45159414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 7e-61; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 14 - 185
Target Start/End: Complemental strand, 43189834 - 43189661
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgta 113  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||| |||    
T  43189834 agaaatcaaaataatataaaaaacacaagtattcgtgcgtatcggaaaattattttcttaaaaaaaaaaatttaatatttggatactctcctgatacgta 43189735  T
Q  114 tcgggaagtatcaggcaggtatcggtgcagaatacgcaggg--aacagtacgtcatccattttgaagtatcggg 185  Q
    ||| |||||||| ||||||||||||||||| ||||||||||   || |||| ||||||||||||||||||||||    
T  43189734 tcgagaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacatcatccattttgaagtatcggg 43189661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 51 - 189
Target Start/End: Original strand, 37346824 - 37346964
Alignment:
Q  51 cgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgc 150  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||| ||||||    
T  37346824 cgtatcggaaaattattttcttaaaaaataaaatttaatatttggatactcccccgatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgc 37346923  T
Q  151 aggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    ||||   || |||||||||||||||||||||||||||||||    
T  37346924 aggggatacggtacgtcatccattttgaagtatcggggctt 37346964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 8132362 - 8132185
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgta 113  Q
    |||||| ||||||||||||||| ||||||||| ||||||||||||| ||| ||||| | |||||||||||||||||||||||||||||||| |||| |||    
T  8132362 agaaattaaaataatataaaaaacacaagtatccgtgcgtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgta 8132263  T
Q  114 tcgggaagtatcaggcaggtatcggtgcagaatacgcaggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    ||||||||||||   || |||||||||||| ||||||||||   || |||||||||| ||||||||||||||| ||||    
T  8132262 tcgggaagtatcgaacatgtatcggtgcaggatacgcaggggatacggtacgtcatctattttgaagtatcggagctt 8132185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 16 - 189
Target Start/End: Original strand, 31653341 - 31653518
Alignment:
Q  16 aaatcaaaataatataaaaag--cacaagtattcgtgcgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgta 113  Q
    ||||||||||||||||||||   ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  31653341 aaatcaaaataatataaaaaaaacacaagtatccgtgcgtatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgta 31653440  T
Q  114 tcgggaagtatcaggcaggtatcggtgcagaatacgc-aggga-acagtacgtcatccattttgaagtatcggggctt 189  Q
    |||||||||||| ||||| ||||||||||  |||| | ||||| ||  ||| | ||||||||||||||||| ||||||    
T  31653441 tcgggaagtatcgggcagatatcggtgcatgatacacaagggatacgatacattatccattttgaagtatcagggctt 31653518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 20409531 - 20409670
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| | |||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||    
T  20409531 gtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgca 20409630  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||||||||||||||||||||||||||||||    
T  20409631 ggggatacggtacgtcatccattttgaagtatcggggctt 20409670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 65 - 189
Target Start/End: Complemental strand, 5984355 - 5984229
Alignment:
Q  65 attttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggg--aacagtac 162  Q
    ||||| |||||||||||||||||||||||||||||||||| |||| |||| ||||||||||| ||| |||||||||||||||||||||||   |||||||    
T  5984355 atttttttaaaaaataaaatttaatatttggatactctccagatacgtattgggaagtatcaagcatgtatcggtgcagaatacgcaggggatacagtac 5984256  T
Q  163 gtcatccattttgaagtatcggggctt 189  Q
    |||||||||||||||||||||||||||    
T  5984255 gtcatccattttgaagtatcggggctt 5984229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 28949218 - 28949357
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| | |||||||||||||||||||||||||||||||| |||| ||||| ||||||||| ||||||||||||||||| |||||||    
T  28949218 gtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcaggaagtatcgggcaggtatcggtgcaggatacgca 28949317  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||||||||||||||||||||||||||||||    
T  28949318 ggggatacggtacgtcatccattttgaagtatcggggctt 28949357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 37104261 - 37104122
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| |||||||||||||||||||||||||||||||||| |||| ||||| ||||||||| ||||||||||||||||| |||||||    
T  37104261 gtatcggataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcaggaagtatcgggcaggtatcggtgcaggatacgca 37104162  T
Q  152 gggaacag--tacgtcatccattttgaagtatcggggctt 189  Q
    ||| | |   ||||||||||||||||||||||||||||||    
T  37104161 ggggatacgatacgtcatccattttgaagtatcggggctt 37104122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 51 - 189
Target Start/End: Original strand, 13012968 - 13013108
Alignment:
Q  51 cgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgc 150  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||  |||| |    
T  13012968 cgtatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcgggaagtatcgggcaggtatcagtgcatgatacac 13013067  T
Q  151 aggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    ||||   ||  || ||||||||||||||||||| |||||||    
T  13013068 aggggatacgatatgtcatccattttgaagtattggggctt 13013108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 1043368 - 1043229
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    ||||| || ||| ||||| || ||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||    
T  1043368 gtatcagataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgca 1043269  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||| ||||||||||||||||||||||||||    
T  1043268 ggggatacggtacatcatccattttgaagtatcggggctt 1043229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 6916851 - 6916990
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| | ||||||||||||||||||||| |||||||||| |||| ||||||| ||||||| ||||||||||||||||| |||||||    
T  6916851 gtatcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgca 6916950  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||||||||||||||||||||||||||||||    
T  6916951 ggggatacggtacgtcatccattttgaagtatcggggctt 6916990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 38330568 - 38330429
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| | ||||||||||||||||||||| |||||||||| |||| ||||||| ||||||| ||||||||||||||||| |||||||    
T  38330568 gtatcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgca 38330469  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||||||||||||||||||||||||||||||    
T  38330468 ggggatacggtacgtcatccattttgaagtatcggggctt 38330429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 52895690 - 52895829
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| | ||||||||||||||||||||| |||||||||| |||| ||||||| ||||||| ||||||||||||||||| |||||||    
T  52895690 gtatcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgca 52895789  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||||||||||||||||||||||||||||||    
T  52895790 ggggatacggtacgtcatccattttgaagtatcggggctt 52895829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 14 - 182
Target Start/End: Original strand, 28659229 - 28659409
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcggaa----------aatgattttcttaaaaaataaaatttaatatttggatactctc 103  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||          ||| ||||| | |||||||||||||||||||||||||||||||    
T  28659229 agaaatcaaaataatataaaaaacacaagtattcgtacgtatcggaacgtatcggataattattttttaaaaaaataaaatttaatatttggatactctc 28659328  T
Q  104 ccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggga--acagtacgtcatccattttgaagtatc 182  Q
    | |||| ||||||| ||||||| |||| |||||||||||  |||||||||||  || |||||||||||||||| |||||||    
T  28659329 cggatacgtatcggaaagtatcgggcatgtatcggtgcatgatacgcagggaataccgtacgtcatccattttaaagtatc 28659409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 52 - 181
Target Start/End: Complemental strand, 1036600 - 1036469
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    ||||| || ||| ||||| |||||||||||||||||||||||||||||||||| |||| ||||||| ||||||| ||||||||||||||||| |||||||    
T  1036600 gtatcagataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgca 1036501  T
Q  152 ggg--aacagtacgtcatccattttgaagtat 181  Q
    |||   || |||||||||||||||||||||||    
T  1036500 ggggatacggtacgtcatccattttgaagtat 1036469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 3426989 - 3426850
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| |||||||||||||||||||||||||||||||||| |||| ||||| ||||||||| | || |||||||||||| |||||||    
T  3426989 gtatcggataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcaggaagtatcggacatgtatcggtgcaggatacgca 3426890  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   ||| ||||||||||||||| ||||||||||||||    
T  3426889 ggggatacaatacgtcatccattttaaagtatcggggctt 3426850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 182
Target Start/End: Complemental strand, 25256805 - 25256625
Alignment:
Q  14 agaaatcaaaataatataaaaag-cacaagtattcgtgcgtatcggaaaatg-------attttcttaaaaaa--taaaatttaatatttggatactctc 103  Q
    ||||||||||||||||||||||  ||||||||| |||||||||||||||||        ||| | ||||||||  |||||||||||||||| ||||||||    
T  25256805 agaaatcaaaataatataaaaaaacacaagtatccgtgcgtatcggaaaatatcttataattattttaaaaaaaataaaatttaatatttgaatactctc 25256706  T
Q  104 ccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcag-gga-acagtacgtcatccattttgaagtatc 182  Q
    | |||| ||||||||||||||| | |||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||    
T  25256705 cggatacgtatcgggaagtatcggacaggtatcggtgcagaatacgcagaggatacagtacgtcatccattttgaaatatc 25256625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 53 - 185
Target Start/End: Complemental strand, 14334300 - 14334177
Alignment:
Q  53 tatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcag 152  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||| | ||||||||||||||  |||||       
T  14334300 tatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccaatacgtatcggggagtatcggacaggtatcggtgcaagatacg--- 14334204  T
Q  153 ggaacagtacgtcatccattttgaagtatcggg 185  Q
          |||||||||||||||||||||||||||    
T  14334203 ------gtacgtcatccattttgaagtatcggg 14334177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 53 - 190
Target Start/End: Complemental strand, 30323856 - 30323716
Alignment:
Q  53 tatcggaaaatgattttcttaaaaaa-taaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    ||||||| ||| ||||| |||||||| |||||||||||||||||||||||||| |||| ||||||||||||||| ||||| |||| |||||| |||| ||    
T  30323856 tatcggataattatttttttaaaaaaataaaatttaatatttggatactctccagatacgtatcgggaagtatcgggcagatatcagtgcaggatacaca 30323757  T
Q  152 ggga--acagtacgtcatccattttgaagtatcggggcttt 190  Q
    | ||  ||  | |||||||||||||||||||||||||||||    
T  30323756 gagaatacgttgcgtcatccattttgaagtatcggggcttt 30323716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 10822523 - 10822404
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatc-ggtgcagaatacgcagggaaca--gtacgtcatcc 169  Q
    ||||||||||||||||| || ||||||||||| || ||||||||||||||||||| ||| |||| ||||||| |||||||||||| |   ||||||||||    
T  10822523 aaaaaataaaatttaatcttcggatactctcctgagatgtatcgggaagtatcagacagatatcgggtgcaggatacgcagggaatatgatacgtcatcc 10822424  T
Q  170 attttgaagtatcggggctt 189  Q
    |||||||||||||| |||||    
T  10822423 attttgaagtatcgaggctt 10822404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 190
Target Start/End: Complemental strand, 29168088 - 29167948
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    ||||| || ||| ||||| | ||||||| ||||||||| || ||||||||||| |||| ||| |||||||||||| |||||||||||||||| |||||||    
T  29168088 gtatcagataattattttttaaaaaaattaaatttaatcttcggatactctcctgatacgtaacgggaagtatcatgcaggtatcggtgcaggatacgca 29167989  T
Q  152 gggaaca--gtacgtcatccattttgaagtatcggggcttt 190  Q
    ||| | |   |||||||||||||||||||||| | ||||||    
T  29167988 ggggatatgatacgtcatccattttgaagtatggaggcttt 29167948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 38948873 - 38948734
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||| | ||| ||||| | |||||||||||||||||||||||||| ||| | |||| |||||| |||||||  ||||| ||||||||||| |||||||    
T  38948873 gtatcgtataattattttttaaaaaaataaaatttaatatttggatattcttcggatacgtatcgagaagtattgggcagatatcggtgcaggatacgca 38948774  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||||||||||||||| ||||||||| ||||    
T  38948773 ggggatacggtacgtcatccattttaaagtatcggagctt 38948734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 34432382 - 34432499
Alignment:
Q  74 aaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggg--aacagtacgtcatccat 171  Q
    |||||||||||||||| || ||||||||||| |||| ||||| ||||||||||||||| || | |||||  ||||||||||   ||| ||||||||||||    
T  34432382 aaaaataaaatttaatcttcggatactctcctgatacgtatcaggaagtatcaggcagataccagtgcatgatacgcaggggatacaatacgtcatccat 34432481  T
Q  172 tttgaagtatcggggctt 189  Q
    ||||||||||||| ||||    
T  34432482 tttgaagtatcggagctt 34432499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 52 - 182
Target Start/End: Original strand, 36367679 - 36367801
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| | |||||||||||||||||||||||||||||||| |||| ||||||          ||||||||||||||||| |||||||    
T  36367679 gtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcg----------ggcaggtatcggtgcaggatacgca 36367768  T
Q  152 ggg--aacagtacgtcatccattttgaagtatc 182  Q
    |||   |||||||||||||||||||||||||||    
T  36367769 ggggatacagtacgtcatccattttgaagtatc 36367801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 52 - 190
Target Start/End: Complemental strand, 40776136 - 40775996
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| |||  |||| | ||||||||||||||||| || |||||||| || |||| |||||| ||||||||| |||| ||| ||||||| |||||||    
T  40776136 gtatcggataattgttttttaaaaaaataaaatttaatcttcggatactcgcctgatacgtatcgagaagtatcatgcagatattggtgcaggatacgca 40776037  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggcttt 190  Q
    |||   ||| |||||| |||||||||||||||| |||||||    
T  40776036 ggggatacattacgtcttccattttgaagtatctgggcttt 40775996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 24851615 - 24851524
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcag 143  Q
    |||||||| ||| ||||| | ||||||||||||||||| |||||||||||||  |||||||||  ||||||||||| |||||||||||||||    
T  24851615 gtatcggataattattttttaaaaaaataaaatttaatctttggatactctcttgatatgtattaggaagtatcagacaggtatcggtgcag 24851524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 51 - 182
Target Start/End: Complemental strand, 2364819 - 2364686
Alignment:
Q  51 cgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgc 150  Q
    ||||||||| ||| |||||   ||||||||||||||||| || ||||||||| | |||| ||||||| ||||||  ||||||||||| ||||| ||||||    
T  2364819 cgtatcggataattatttttaaaaaaaataaaatttaatcttcggatactcttctgatacgtatcggaaagtattgggcaggtatcgatgcaggatacgc 2364720  T
Q  151 agggaaca--gtacgtcatccattttgaagtatc 182  Q
    |||| | |  |||||| |||||||||||||||||    
T  2364719 aggggatatggtacgttatccattttgaagtatc 2364686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 9781783 - 9781644
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| |||||   |||||| |||| ||||| || ||||||||| | |||| ||||||| ||||||| ||||||||||||||||| |||||||    
T  9781783 gtatcggataattattttaaaaaaaaaaaaaaattaatcttcggatactcttctgatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgca 9781684  T
Q  152 gggaacag--tacgtcatccattttgaagtatcggggctt 189  Q
    ||| | |   ||||||| ||||||||||||||| ||||||    
T  9781683 ggggatacgatacgtcaaccattttgaagtatcagggctt 9781644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 75 - 183
Target Start/End: Complemental strand, 14167202 - 14167092
Alignment:
Q  75 aaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagg-ga-acagtacgtcatccatt 172  Q
    ||||||||||||||| || ||||||||| | |||| ||||| ||||||||||| ||| ||||||||||| ||||||||| || ||  || ||||||||||    
T  14167202 aaaataaaatttaatcttcggatactcttctgatacgtatcaggaagtatcagacagatatcggtgcaggatacgcaggtgatacgataagtcatccatt 14167103  T
Q  173 ttgaagtatcg 183  Q
    |||||||||||    
T  14167102 ttgaagtatcg 14167092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 32381035 - 32381176
Alignment:
Q  51 cgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgc 150  Q
    ||||||||| ||| ||||| | ||||||||||||||||| || ||||||||||| |||| |||| |||||||||||| ||  ||| ||||||  ||| ||    
T  32381035 cgtatcggataattattttttaaaaaaataaaatttaatcttcggatactctcctgatacgtattgggaagtatcagacaaatattggtgcatgatatgc 32381134  T
Q  151 aggg--aacagtacgtcatccattttgaagtatcggggcttt 190  Q
    ||||   || |||  ||||||||||| |||||||||||||||    
T  32381135 aggggatacggtatatcatccattttaaagtatcggggcttt 32381176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 190
Target Start/End: Original strand, 41675966 - 41676106
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||| ||| ||| ||||| | ||||||||||||||||| || ||||||||| || |||  |||  ||||||||| | ||||||||||||||  |||||||    
T  41675966 gtattggataattattttttaaaaaaataaaatttaatcttcggatactcttccaatacatattaggaagtatcggacaggtatcggtgcatgatacgca 41676065  T
Q  152 gg-ga-acagtacgtcatccattttgaagtatcggggcttt 190  Q
    || || || |||||||||||||||| || ||||||||||||    
T  41676066 ggagatacggtacgtcatccattttaaaatatcggggcttt 41676106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 189
Target Start/End: Original strand, 2472873 - 2472970
Alignment:
Q  94 ggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagggaacag--tacgtcatccattttgaagtatcggggctt 189  Q
    ||||||||||| |||| ||||||| |||||||||||||||| |||||||| ||| |||||| | |   ||||||||| ||||||||||||||| ||||    
T  2472873 ggatactctcctgatacgtatcggaaagtatcaggcaggtaccggtgcaggatatgcaggggatacgatacgtcatctattttgaagtatcggagctt 2472970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 52 - 153
Target Start/End: Original strand, 48715202 - 48715303
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    ||||| || ||| ||||| | ||| ||||||||||||| || ||| ||||||| |||| ||||||||||||||| ||| |||||||||| || |||||||    
T  48715202 gtatctgataattattttttaaaacaataaaatttaatcttcggacactctcctgatacgtatcgggaagtatcgggccggtatcggtgtaggatacgca 48715301  T
Q  152 gg 153  Q
    ||    
T  48715302 gg 48715303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 186
Target Start/End: Original strand, 3708274 - 3708392
Alignment:
Q  71 ttaaaaaataaaa-tttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcag-gga-acagtacgtcat 167  Q
    ||||||||||||| ||||||||| | ||||||||| |||| ||||||  ||||||| |||| |||| |||| || ||| |||| ||| ||  ||||||||    
T  3708274 ttaaaaaataaaaatttaatattcgaatactctcctgatacgtatcgaaaagtatcgggcatgtattggtgtaggatatgcagaggatacgatacgtcat 3708373  T
Q  168 ccattttgaagtatcgggg 186  Q
    |||||||||||||||||||    
T  3708374 ccattttgaagtatcgggg 3708392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 182
Target Start/End: Complemental strand, 15417570 - 15417462
Alignment:
Q  76 aaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagggaaca--gtacgtcatccattt 173  Q
    ||||||||||||||  |  |||||||| ||||||||||||| |||||||| ||||  ||||| |||||||||||||| ||| |   ||| ||||||||||    
T  15417570 aaataaaatttaatgatctgatactcttccgatatgtatcgagaagtatcgggcatatatcgatgcagaatacgcagagaatatgatacatcatccattt 15417471  T
Q  174 tgaagtatc 182  Q
    | |||||||    
T  15417470 taaagtatc 15417462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 9528859 - 9528943
Alignment:
Q  95 gatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgc-aggga-acagtacgtcatccattttgaa 177  Q
    |||||| |||||||| ||||||||||||||||  ||||||||||||||  |||| | ||||| ||| ||||||||||||||||||    
T  9528859 gatactatcccgatacgtatcgggaagtatcaaacaggtatcggtgcaagatacacaagggatacaatacgtcatccattttgaa 9528943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 58
Target Start/End: Complemental strand, 38948929 - 38948887
Alignment:
Q  16 aaatcaaaataatataaaaagcacaagtattcgtgcgtatcgg 58  Q
    |||||||||||||||||||| ||||||||| ||||||||||||    
T  38948929 aaatcaaaataatataaaaaacacaagtatccgtgcgtatcgg 38948887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 189
Target Start/End: Complemental strand, 29861900 - 29861803
Alignment:
Q  94 ggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagg-ga-acagtacgtcatccattttgaagtatcggggctt 189  Q
    ||||||||| | |||| ||||||| ||||||| ||||||| | ||||||  ||||| ||| || ||| ||||||| ||||||||||||||||||||||    
T  29861900 ggatactcttctgatacgtatcggaaagtatcgggcaggtgtgggtgcatgatacgtaggagatacaatacgtcaaccattttgaagtatcggggctt 29861803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 149
Target Start/End: Original strand, 41027923 - 41028019
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacg 149  Q
    |||||||| |||  |||| |||||||||||||||||||  | |||||||||||| ||| |||||||   ||||  |||| ||||||||||||||||||    
T  41027923 gtatcggacaattgtttttttaaaaaataaaatttaattgtcggatactctcccaatacgtatcggagcgtat-gggcatgtatcggtgcagaatacg 41028019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 2222980 - 2223044
Alignment:
Q  76 aaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtg 140  Q
    |||||||||||||| ||  |||||||||| |||| ||||||| || |||||| ||||||||||||    
T  2222980 aaataaaatttaatcttcagatactctcctgatacgtatcggaaaatatcagacaggtatcggtg 2223044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 186
Target Start/End: Complemental strand, 33039730 - 33039618
Alignment:
Q  76 aaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgc-aggga-acagtacgtcatccattt 173  Q
    ||||| |||||||| || ||||||||||  ||||| ||||||| |||||    ||||||||||||||| |||||| ||||| ||| || || ||||||||    
T  33039730 aaatataatttaattttcggatactctcttgatatatatcggggagtattgaacaggtatcggtgcaggatacgcaagggatacaatatgttatccattt 33039631  T
Q  174 tgaagtatcgggg 186  Q
    | |||||||||||    
T  33039630 taaagtatcgggg 33039618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 1036658 - 1036615
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcg 57  Q
    |||||||||||||||||||| | ||||||||| |||||||||||    
T  1036658 agaaatcaaaataatataaagaacacaagtatccgtgcgtatcg 1036615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 1043426 - 1043383
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcg 57  Q
    |||||||||||||||||||| | ||||||||| |||||||||||    
T  1043426 agaaatcaaaataatataaagaacacaagtatccgtgcgtatcg 1043383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 189
Target Start/End: Complemental strand, 36551526 - 36551493
Alignment:
Q  156 acagtacgtcatccattttgaagtatcggggctt 189  Q
    ||||||||||||| ||||||||||||||||||||    
T  36551526 acagtacgtcatcaattttgaagtatcggggctt 36551493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 37104320 - 37104275
Alignment:
Q  14 agaaatcaaaataatata-aaaagcacaagtattcgtgcgtatcgg 58  Q
    |||||||||||||||||| |||| ||||||||| ||||||||||||    
T  37104320 agaaatcaaaataatataaaaaaacacaagtatccgtgcgtatcgg 37104275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 38330627 - 38330582
Alignment:
Q  14 agaaatcaaaataatata-aaaagcacaagtattcgtgcgtatcgg 58  Q
    |||||||||||||||||| |||| ||||||||| ||||||||||||    
T  38330627 agaaatcaaaataatataaaaaaacacaagtatccgtgcgtatcgg 38330582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 189
Target Start/End: Complemental strand, 37922393 - 37922269
Alignment:
Q  67 tttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca-ggga-acagtacgt 164  Q
    |||| |||||||||||||||||| ||| ||||||||||  | |  ||||| ||||||||| |||| ||| | ||||| ||| ||| | || |||||||||    
T  37922393 tttcctaaaaaataaaatttaatctttagatactctcctaacacatatcgagaagtatcaagcagatattgatgcaggatatgcatgagatacagtacgt 37922294  T
Q  165 catccattttgaagtatcggggctt 189  Q
    | |||||||| || |||||| ||||    
T  37922293 cgtccattttaaaatatcggagctt 37922269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 105; Significance: 2e-52; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 35389891 - 35389752
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||    
T  35389891 gtatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgca 35389792  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||||||||||||||||||||||||||||||    
T  35389791 ggggatacggtacgtcatccattttgaagtatcggggctt 35389752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 14 - 189
Target Start/End: Original strand, 42464846 - 42465023
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgta 113  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||| ||| ||||| | ||| ||||||| |||||||||||||||||| | |||| |||    
T  42464846 agaaataaaaataatataaaaaatacaagtatccgtgcgtatcggataattattttttaaaacaataaaaattaatatttggatactcttcggatacgta 42464945  T
Q  114 tcgggaagtatcaggcaggtatcggtgcagaatacgcag-gga-acagtacgtcatccattttgaagtatcggggctt 189  Q
    |||||||||||| ||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||    
T  42464946 tcgggaagtatcgggcaggtatcggtgcaggatacgcagaggatacagtacgtcatccattttgaagtatcggggctt 42465023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 19 - 189
Target Start/End: Complemental strand, 48122999 - 48122827
Alignment:
Q  19 tcaaaataatataaaaagcacaagtattcgtgcgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcggg 118  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||| ||||| | |||||||||||||||||||||||||||||||  |||| ||||||||    
T  48122999 tcaaaataatataaaaaacacaagtattcgtgcgtatcggataattattttttaaaaaaataaaatttaatatttggatactctctggatacgtatcggg 48122900  T
Q  119 aagtatcaggcaggtatcggtgcagaatacgcaggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    || |||| |||| |||||||||||| ||| ||||||   || |||||||||||||||||||||||||||||||    
T  48122899 aaatatcgggcatgtatcggtgcaggatatgcaggggatacggtacgtcatccattttgaagtatcggggctt 48122827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 22310846 - 22310707
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||  ||||| ||||||||||||||||||||||||||||||||| |||| ||    
T  22310846 gtatcggaaaattattttcttaaaaaataaaatttaatattttgatactctatcgatacgtatcgggaagtatcaggcaggtatcggtgcaggatacaca 22310747  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||||||||||||| ||||||||||||||||    
T  22310746 ggggatacggtacgtcatccattgtgaagtatcggggctt 22310707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 7327853 - 7327714
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| | |||||||||||||||||||||||||||| ||| |||| ||||||||||||||| ||||||||||||||||| |||||||    
T  7327853 gtatcggataattattttttaaaaaaataaaatttaatatttggatactatccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgca 7327754  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||||||||||||||||||||||||||||||    
T  7327753 ggggatacggtacgtcatccattttgaagtatcggggctt 7327714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 28882655 - 28882794
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||  ||||||||||  |||||||    
T  28882655 gtatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggcatatatcggtgcatgatacgca 28882754  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||||||||||||||||||||||||| ||||    
T  28882755 ggggatacggtacgtcatccattttgaagtatcggagctt 28882794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 40497471 - 40497332
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| || ||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||| |||||||||||| |||||||    
T  40497471 gtatcggataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaagtatcggtgcaggatacgca 40497372  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||||||||||||||||||||||||||||||    
T  40497371 ggggatacggtacgtcatccattttgaagtatcggggctt 40497332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 1679675 - 1679814
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| || ||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| ||| |||    
T  1679675 gtatcggataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatatgca 1679774  T
Q  152 g-gga-acagtacgtcatccattttgaagtatcggggctt 189  Q
    | ||| || |||||| ||||||||||||||||||||||||    
T  1679775 gtggatacggtacgttatccattttgaagtatcggggctt 1679814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 52505810 - 52505948
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| || ||||||||||||||||||||||||||||| | |||| |||||||||| |||| ||| ||||||||||||| |||||||    
T  52505810 gtatcggataattatttttttgaaaaataaaatttaatatttggatactcttcggatacgtatcgggaaatatcgggccggtatcggtgcaggatacgca 52505909  T
Q  152 ggga-acagtacgtcatccattttgaagtatcggggctt 189  Q
    |||| ||||||| ||||||||||| ||||||||||||||    
T  52505910 gggatacagtacatcatccatttttaagtatcggggctt 52505948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 37996788 - 37996927
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| | |||||||||||||||||||||||||||||||| |||| |||||||||| |||| ||||||| ||||||||| |||||||    
T  37996788 gtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaaatatcgggcaggtctcggtgcaggatacgca 37996887  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||||||||||||||| ||||||||||||||    
T  37996888 ggggatacggtacgtcatccattttaaagtatcggggctt 37996927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 52121321 - 52121182
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||| | |||||||  |||||| |||||||    
T  52121321 gtatcgaaaaattatttttttaaaaaataaaatttaatatttggatactctcccgatacgtatcgagaagtatcggacaggtattagtgcaggatacgca 52121222  T
Q  152 gggaacag--tacgtcatccattttgaagtatcggggctt 189  Q
    ||| | |   ||||||||||||||||||||||||||||||    
T  52121221 ggggatacgatacgtcatccattttgaagtatcggggctt 52121182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 51 - 151
Target Start/End: Complemental strand, 33240092 - 33239992
Alignment:
Q  51 cgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgc 150  Q
    |||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||| ||||||    
T  33240092 cgtatcggtaaattattttcttaaaaaataaaatataatatttggatactctcccgatacgtatcgggaagtatcgggcaggtatcgatgcaggatacgc 33239993  T
Q  151 a 151  Q
    |    
T  33239992 a 33239992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 56 - 189
Target Start/End: Original strand, 41742053 - 41742188
Alignment:
Q  56 cggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcag-gg 154  Q
    |||| ||| ||||| || |||||||||||||||| || ||||||||||| ||||||||||||||||||||||| |||||||||||||| |||| ||| ||    
T  41742053 cggataattattttttttaaaaataaaatttaatcttcggatactctccagatatgtatcgggaagtatcaggaaggtatcggtgcaggatacacagagg 41742152  T
Q  155 a-acagtacgtcatccattttgaagtatcggggctt 189  Q
    | ||| ||||||||||||||||||||||||| ||||    
T  41742153 atacaatacgtcatccattttgaagtatcggcgctt 41742188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 6134359 - 6134498
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| ||||||||||| ||||||| || ||||||||||| ||||  ||||||||||||||||| | |||||||||||| |||||||    
T  6134359 gtatcggataattatttttttaaaaaataatatttaatcttcggatactctcctgatacatatcgggaagtatcaggtatgtatcggtgcaggatacgca 6134458  T
Q  152 gggaacag--tacgtcatccattttgaagtatcggggctt 189  Q
    ||| | |   ||||||||||||||||||||||| ||||||    
T  6134459 ggggatacgatacgtcatccattttgaagtatcagggctt 6134498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 28968651 - 28968512
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacg-- 149  Q
    |||||||| ||| ||||| || |||||||||||||||| || ||||||||| | |||| ||||||||||||||| ||||||||||||||||| |||||      
T  28968651 gtatcggataattattttttttaaaaataaaatttaatcttcggatactcttctgatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgta 28968552  T
Q  150 cagggaacagtacgtcatccattttgaagtatcggggctt 189  Q
     |||  |  |||||||||||||||||||||||||||||||    
T  28968551 aaggatatggtacgtcatccattttgaagtatcggggctt 28968512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 55268993 - 55269128
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| | ||||||||||||||||| || ||||||||||| |||| ||||||||||||||||||    ||||| ||||| |||||||    
T  55268993 gtatcggataattattttttaaaaaaataaaatttaatcttcggatactctcctgatacgtatcgggaagtatcagg----tatcgatgcaggatacgca 55269088  T
Q  152 gggaacag--tacgtcatccattttgaagtatcggggctt 189  Q
    ||| | |   ||||||||||||||||||||||||||||||    
T  55269089 ggggatacgatacgtcatccattttgaagtatcggggctt 55269128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 75 - 189
Target Start/End: Complemental strand, 2122825 - 2122706
Alignment:
Q  75 aaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca----ggga-acagtacgtcatcc 169  Q
    ||||||||||||||| || |||| |||||| |||| |||||||||||||||||||| |||||||||||  |||||||    |||| ||| ||||||||||    
T  2122825 aaaataaaatttaatcttcggattctctcctgatacgtatcgggaagtatcaggcaagtatcggtgcatgatacgcaggaggggatacaatacgtcatcc 2122726  T
Q  170 attttgaagtatcggggctt 189  Q
    ||||||||||||||||||||    
T  2122725 attttgaagtatcggggctt 2122706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 73 - 189
Target Start/End: Original strand, 13748445 - 13748563
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcag-gga-acagtacgtcatcca 170  Q
    ||||||||||||||||| || ||||||||| | |||| ||||||| ||||||| ||||||||||||||||| |||||||| ||| ||  ||||||| |||    
T  13748445 aaaaaataaaatttaatcttcggatactcttctgatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcagaggatacgatacgtcaacca 13748544  T
Q  171 ttttgaagtatcggggctt 189  Q
    |||||||||||||||||||    
T  13748545 ttttgaagtatcggggctt 13748563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 51 - 153
Target Start/End: Original strand, 45532956 - 45533058
Alignment:
Q  51 cgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgc 150  Q
    ||||||||| ||| ||||| || ||||||||||||||||||||||||||||| | |||| ||||||||||||||| ||||||||||| ||||| || |||    
T  45532956 cgtatcggataattattttttttaaaaataaaatttaatatttggatactcttcggatacgtatcgggaagtatcgggcaggtatcgatgcaggattcgc 45533055  T
Q  151 agg 153  Q
    |||    
T  45533056 agg 45533058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 31 - 189
Target Start/End: Complemental strand, 53192650 - 53192500
Alignment:
Q  31 aaaaagcacaagtattcgtgcgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggca 130  Q
    ||||| ||||| |||  |||||||||||| ||| ||||| | |||||||||||||||||||||||||||||||| |||| ||||||          ||||    
T  53192650 aaaaaacacaattatgtgtgcgtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcg----------ggca 53192561  T
Q  131 ggtatcggtgcagaatacgcaggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    ||||||||||||| |||| |||||   || |||||||||||||||||||||||||||||||    
T  53192560 ggtatcggtgcaggatactcagggtatacggtacgtcatccattttgaagtatcggggctt 53192500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 22611361 - 22611490
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| |||||||||||||||||||||||||||||||||| |||| ||||||          ||||||||||||||||| | |||||    
T  22611361 gtatcggataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcg----------ggcaggtatcggtgcaggaaacgca 22611450  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||||||||||||||||||||||||||||||    
T  22611451 ggggatacggtacgtcatccattttgaagtatcggggctt 22611490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 51 - 181
Target Start/End: Complemental strand, 42229816 - 42229684
Alignment:
Q  51 cgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgc 150  Q
    ||||||||| ||| ||||| || |||||||||||||||| || ||||||||| | |||| ||||| ||||||||| ||||||||||||||||| ||||||    
T  42229816 cgtatcggataattattttttttaaaaataaaatttaattttcggatactcttctgatacgtatcaggaagtatcgggcaggtatcggtgcaggatacgc 42229717  T
Q  151 agggaacag--tacgtcatccattttgaagtat 181  Q
    |||| | |   ||||||||| ||||||||||||    
T  42229716 aggggatataatacgtcatctattttgaagtat 42229684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 76 - 189
Target Start/End: Original strand, 22289722 - 22289837
Alignment:
Q  76 aaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagggaacag--tacgtcatccattt 173  Q
    |||||||||||||| || ||||||||||| |||| ||||| |||||||||| |||||||| ||||||| |||||||||| | |   ||||||||||||||    
T  22289722 aaataaaatttaatcttcggatactctcctgatacgtatcaggaagtatcatgcaggtattggtgcaggatacgcaggggatacgatacgtcatccattt 22289821  T
Q  174 tgaagtatcggggctt 189  Q
    |||||||||| |||||    
T  22289822 tgaagtatcgaggctt 22289837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 189
Target Start/End: Complemental strand, 52684341 - 52684203
Alignment:
Q  53 tatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca- 151  Q
    ||||||| ||| ||||| || ||||||||||||||||||| |||||||||||  ||| ||||||| ||||||| | ||||||||||||||| |||||||     
T  52684341 tatcggataattattttttttaaaaataaaatttaatattcggatactctcctaatacgtatcggaaagtatcggacaggtatcggtgcaggatacgcat 52684242  T
Q  152 ggga-acagtacgtcatccattttgaagtatcggggctt 189  Q
    | || ||  ||||||||| ||||||||||||||| ||||    
T  52684241 gagatacgatacgtcatctattttgaagtatcggagctt 52684203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 28704868 - 28704729
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| | ||||||||||||||||||||| |||||||||| ||||  ||| || ||||||| |  ||||||| |||||| ||| |||    
T  28704868 gtatcggataattattttttaaaaaaataaaatttaatattttgatactctccggatacatattggaaagtatcggataggtatcagtgcaggatatgca 28704769  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||||||||||||||| ||||||||||||||    
T  28704768 ggggatacggtacgtcatccattttaaagtatcggggctt 28704729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 73 - 173
Target Start/End: Complemental strand, 3983817 - 3983715
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaat--acgcagggaacagtacgtcatcca 170  Q
    ||||||||||||||||| || ||||||||||| |||| ||||||||||||||||| || |||||||||||| ||  ||| |||  |||||||||||||||    
T  3983817 aaaaaataaaatttaatcttcggatactctcctgatacgtatcgggaagtatcagacaagtatcggtgcaggatacacggaggatacagtacgtcatcca 3983718  T
Q  171 ttt 173  Q
    |||    
T  3983717 ttt 3983715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 19421557 - 19421466
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcag 143  Q
    |||||||| ||| | ||| | ||||||||||||||||| || ||||||||||| |||| ||||||||||||||||| |||||||||||||||    
T  19421557 gtatcggataattactttttaaaaaaataaaatttaatcttcggatactctcctgatacgtatcgggaagtatcagacaggtatcggtgcag 19421466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 52 - 185
Target Start/End: Original strand, 25937041 - 25937176
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| | ||| || |||||||||||||||||||| |||||||||| |||| ||||||| ||||||| |||| |||| |||| || |||||||    
T  25937041 gtatcggataattaatttttttaaaaataaaatttaatatttagatactctccagatacgtatcggaaagtatcgggcatgtattggtgtaggatacgca 25937140  T
Q  152 gg-ga-acagtacgtcatccattttgaagtatcggg 185  Q
    || || ||  ||||||||||||||| ||||||||||    
T  25937141 ggagatacgatacgtcatccattttaaagtatcggg 25937176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 76 - 183
Target Start/End: Complemental strand, 983311 - 983202
Alignment:
Q  76 aaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagggaacag--tacgtcatccattt 173  Q
    |||||||||||||| |||||||||||||| |||| ||||||||||||||||| ||| |||| ||||| ||||| ||||| | |   ||||||||||||||    
T  983311 aaataaaatttaatctttggatactctcctgatacgtatcgggaagtatcagacagatatcagtgcaaaatacacaggggatacgatacgtcatccattt 983212  T
Q  174 tgaagtatcg 183  Q
    |||| |||||    
T  983211 tgaattatcg 983202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 10225139 - 10225212
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatc 125  Q
    |||||||| ||| ||||| |||||||||||||||||||||||||||||||||| |||| ||||||| |||||||    
T  10225139 gtatcggataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcggaaagtatc 10225212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 152
Target Start/End: Complemental strand, 25700878 - 25700801
Alignment:
Q  75 aaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcag 152  Q
    ||||||||||||||| || ||||||||||| |||| ||||  ||||||||||||||||||||||||||| ||||||||    
T  25700878 aaaataaaatttaatcttcggatactctcctgatacgtattaggaagtatcaggcaggtatcggtgcaggatacgcag 25700801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 181
Target Start/End: Complemental strand, 30226542 - 30226430
Alignment:
Q  71 ttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcag-gga-acagtacgtcatc 168  Q
    ||||||||||||||||||| || ||||||||||  |||| ||||| | ||||||| ||||||||||||||||| |||||||| ||| ||  || ||||||    
T  30226542 ttaaaaaataaaatttaatcttcggatactctcttgatacgtatcagaaagtatcgggcaggtatcggtgcaggatacgcagaggatacgataagtcatc 30226443  T
Q  169 cattttgaagtat 181  Q
    |||||||||||||    
T  30226442 cattttgaagtat 30226430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 2567375 - 2567448
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatc 125  Q
    |||||||| ||| ||||| |||||||||||||||||||||| ||||||||||  |||| |||||||||||||||    
T  2567375 gtatcggataattatttttttaaaaaataaaatttaatattcggatactctctggatacgtatcgggaagtatc 2567448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 189
Target Start/End: Original strand, 7899717 - 7899835
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacg-caggga-acagtacgtcatcca 170  Q
    ||||||||||||||||| || ||||||||| | |||| |||||||||| ||||| |||| ||| ||||||| |||||  || || ||| | |||||||||    
T  7899717 aaaaaataaaatttaatcttcggatactcttctgatacgtatcgggaaatatcaagcagatataggtgcaggatacgtaagagatacatttcgtcatcca 7899816  T
Q  171 ttttgaagtatcggggctt 189  Q
    ||||||||||||| |||||    
T  7899817 ttttgaagtatcgaggctt 7899835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 95 - 185
Target Start/End: Complemental strand, 29915959 - 29915867
Alignment:
Q  95 gatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagggaacag--tacgtcatccattttgaagtatcggg 185  Q
    |||||| ||| |||| ||||||||||||||||| ||||||||||||||  |||||||||| | |   ||||||||| ||||||||||||||||    
T  29915959 gatactatcctgatacgtatcgggaagtatcagacaggtatcggtgcatgatacgcaggggatacgatacgtcatctattttgaagtatcggg 29915867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 95 - 185
Target Start/End: Complemental strand, 29965112 - 29965020
Alignment:
Q  95 gatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagggaacag--tacgtcatccattttgaagtatcggg 185  Q
    |||||| ||| |||| ||||||||||||||||| ||||||||||||||  |||||||||| | |   ||||||||| ||||||||||||||||    
T  29965112 gatactatcctgatacgtatcgggaagtatcagacaggtatcggtgcatgatacgcaggggatacgatacgtcatctattttgaagtatcggg 29965020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 75 - 189
Target Start/End: Original strand, 30787562 - 30787678
Alignment:
Q  75 aaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagggaacag--tacgtcatccatt 172  Q
    ||||||||||||||| || ||||||||||| |||| |||||| ||||| |||  || ||||| || ||| |||||||||| | |   ||||||||| |||    
T  30787562 aaaataaaatttaatcttcggatactctcctgatacgtatcgagaagtgtcaaacaagtatcagtacaggatacgcaggggatacgatacgtcatcgatt 30787661  T
Q  173 ttgaagtatcggggctt 189  Q
    |||||||||||||||||    
T  30787662 ttgaagtatcggggctt 30787678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 197 - 265
Target Start/End: Complemental strand, 47047623 - 47047552
Alignment:
Q  197 tttttccagaaacattactgcaaaacagagaattatt---gttattgttactacctcgttctaattgatgat 265  Q
    ||||||||||||||| ||||| |||||||||||||||   ||| |||||||||||| |||||||||||||||    
T  47047623 tttttccagaaacataactgcgaaacagagaattattattgttcttgttactaccttgttctaattgatgat 47047552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 21157706 - 21157845
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| | ||||||||||||||||| || ||||||||||| | || ||||| | ||||||| ||||| ||||  ||||| || | ||    
T  21157706 gtatcggataattattttttaaaaaaataaaatttaatcttcggatactctcctggtacgtatcagaaagtatcgggcagttatcaatgcaggatgcaca 21157805  T
Q  152 ggga--acagtacgtcatccattttgaagtatcggggctt 189  Q
    | ||  ||  ||||||||||||||||||||||| ||||||    
T  21157806 gagaatacgatacgtcatccattttgaagtatctgggctt 21157845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 118
Target Start/End: Complemental strand, 1528631 - 1528567
Alignment:
Q  53 tatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcggg 118  Q
    ||||||| ||| ||||| ||||||| |||||||||||||||||||||||||| |||| ||||||||    
T  1528631 tatcggataattatttttttaaaaa-taaaatttaatatttggatactctccggatacgtatcggg 1528567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 28704926 - 28704882
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcgg 58  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||    
T  28704926 agaaatcaaaataatataaaaaacacaagtatccgtgcgtatcgg 28704882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 190
Target Start/End: Complemental strand, 39664078 - 39663959
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagggaacag--tacgtcatcca 170  Q
    ||||||||||| ||||| || | ||||| | | |||| ||||||| ||||||| | ||||||||||||||| |||||||| ||| ||  ||| ||| |||    
T  39664078 aaaaaataaaaattaatcttcgaatactattctgatacgtatcggaaagtatcggacaggtatcggtgcaggatacgcagagaatagaatacatcaacca 39663979  T
Q  171 ttttgaagtatcggggcttt 190  Q
    |||||||||||  |||||||    
T  39663978 ttttgaagtattagggcttt 39663959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 1528690 - 1528647
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcg 57  Q
    |||||||||||||||||||||| ||||||||| |||||||||||    
T  1528690 agaaatcaaaataatataaaaaacacaagtatccgtgcgtatcg 1528647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 181
Target Start/End: Original strand, 19879140 - 19879201
Alignment:
Q  122 tatcaggcaggtatcggtgcagaatacgcaggg--aacagtacgtcatccattttgaagtat 181  Q
    |||| ||||||||||||||||| ||||||||||   || |||||||||||||||||||||||    
T  19879140 tatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtat 19879201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 143
Target Start/End: Complemental strand, 45347417 - 45347347
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcag 143  Q
    ||||||||||||||||| || ||||||||| | |||| ||||||  ||||||| |||||||||| ||||||    
T  45347417 aaaaaataaaatttaatcttcggatactcttcggatacgtatcgaaaagtatcgggcaggtatcagtgcag 45347347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 45057253 - 45057308
Alignment:
Q  96 atactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    ||||||||  |||| ||||||||||||||| |||| |||||||||||| |||||||    
T  45057253 atactctcatgatacgtatcgggaagtatcgggcaagtatcggtgcaggatacgca 45057308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 45532909 - 45532952
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcg 57  Q
    |||||||||||||||||||| | ||||||||| |||||||||||    
T  45532909 agaaatcaaaataatataaagaacacaagtatccgtgcgtatcg 45532952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 47642078 - 47642019
Alignment:
Q  132 gtatcggtgcagaatacgca-ggga-acagtacgtcatccattttgaagtatcggggctt 189  Q
    |||||||||||| ||||||| |||| || ||||||||||||||||||||||||| |||||    
T  47642078 gtatcggtgcaggatacgcatgggatacggtacgtcatccattttgaagtatcgaggctt 47642019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 189
Target Start/End: Complemental strand, 33238755 - 33238725
Alignment:
Q  159 gtacgtcatccattttgaagtatcggggctt 189  Q
    |||||||||||||||||||||||||||||||    
T  33238755 gtacgtcatccattttgaagtatcggggctt 33238725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 189
Target Start/End: Complemental strand, 19420936 - 19420907
Alignment:
Q  160 tacgtcatccattttgaagtatcggggctt 189  Q
    ||||||||||||||||||||||||||||||    
T  19420936 tacgtcatccattttgaagtatcggggctt 19420907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 40497530 - 40497485
Alignment:
Q  14 agaaatcaaaataatata-aaaagcacaagtattcgtgcgtatcgg 58  Q
    |||||||||||||||||| |||| ||||||||| ||||||||||||    
T  40497530 agaaatcaaaataatataaaaaaacacaagtatccgtgcgtatcgg 40497485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 125
Target Start/End: Complemental strand, 47642147 - 47642074
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatc 125  Q
    ||||| || ||| ||||| ||| ||||||||||||||| || ||||||||| | |||| |||| ||||||||||    
T  47642147 gtatcagataattatttttttataaaataaaatttaatcttcggatactcttctgatacgtattgggaagtatc 47642074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 121
Target Start/End: Complemental strand, 5271589 - 5271541
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaag 121  Q
    ||||||||||||||||| |  ||||||||||| |||| |||||||||||    
T  5271589 aaaaaataaaatttaatctccggatactctcctgatacgtatcgggaag 5271541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 19879080 - 19879132
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcc 104  Q
    |||||||| ||| ||||| ||||||||||||||| ||| || |||||||||||    
T  19879080 gtatcggataattatttttttaaaaaataaaattgaatcttcggatactctcc 19879132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 48333199 - 48333147
Alignment:
Q  74 aaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatca 126  Q
    |||||||||||||||| || ||||||| ||| |||| ||||| ||||||||||    
T  48333199 aaaaataaaatttaatcttcggatactttcctgatacgtatcaggaagtatca 48333147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 52505752 - 52505788
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtg 50  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  52505752 agaaatcaaaataatataaaaaacacaagtatccgtg 52505788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 102; Significance: 1e-50; HSPs: 2)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 52 - 190
Target Start/End: Complemental strand, 5653 - 5513
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||    
T  5653 gtatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgca 5554  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggcttt 190  Q
    |||   || ||||||| ||||||||||||||||||||||||    
T  5553 ggggatacggtacgtcgtccattttgaagtatcggggcttt 5513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 5709 - 5654
Alignment:
Q  8 aagcagagaaatcaaaataatata--aaaagcacaagtattcgtgcgtatcggaaa 61  Q
    ||||| ||||||||||||||||||  |||| ||||||||| |||||||||||||||    
T  5709 aagcatagaaatcaaaataatataaaaaaaacacaagtatccgtgcgtatcggaaa 5654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 98; Significance: 3e-48; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 51 - 189
Target Start/End: Original strand, 1043047 - 1043187
Alignment:
Q  51 cgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgc 150  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||| ||||||    
T  1043047 cgtatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcaggcaggtatcgatgcaggatacgc 1043146  T
Q  151 agggaacag--tacgtcatccattttgaagtatcggggctt 189  Q
    |||| | |   ||||||||||||||||||||||||||||||    
T  1043147 aggggatacgatacgtcatccattttgaagtatcggggctt 1043187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 19510699 - 19510525
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgta 113  Q
    |||||||||||||||||||||| |||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||  ||    
T  19510699 agaaatcaaaataatataaaaaacacaagaattcgtgcgcatcggaaaattattttcttaaaaaataaaatttaatatttggatactcacccgatacata 19510600  T
Q  114 tcgggaagtatcaggcaggtatcggtgcagaatacgcaggg--aacagtacgtcatccattttgaagtatcgggg 186  Q
    || ||||||||| |||| ||||| |||||  |||| |||||   ||  |||||||||||||||||||||||||||    
T  19510599 tcaggaagtatcgggcatgtatcagtgcatgatacacaggggatacgatacgtcatccattttgaagtatcgggg 19510525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 8028871 - 8028738
Alignment:
Q  16 aaatcaaaataatataaaaagcacaagtattcgtgcgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatc 115  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||| |||||    
T  8028871 aaatcaaaataatataaaaaacacaagtatccgtgcgtatcggaaaattatttttttaaaatataaaatttaatatttggatactctcccgatacgtatc 8028772  T
Q  116 gggaagtatcaggcaggtatcggtgcagaatacg 149  Q
     ||||||||| ||| ||||||||||||| |||||    
T  8028771 aggaagtatcgggccggtatcggtgcaggatacg 8028738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 27354059 - 27353920
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| | |||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||    
T  27354059 gtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgca 27353960  T
Q  152 ggga--acagtacgtcatccattttgaagtatcggggctt 189  Q
    ||||  || |||||||||||||||||||||||||||||||    
T  27353959 gggaatacggtacgtcatccattttgaagtatcggggctt 27353920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 11829827 - 11829688
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| || ||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||| ||||||||||| |||||||    
T  11829827 gtatcggataattattttttttaaaaataaaatttaatatttggatactctccggatacgtattgggaagtatcaggcagatatcggtgcaggatacgca 11829728  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||||||||||||||||||||||||||||||    
T  11829727 ggggatacggtacgtcatccattttgaagtatcggggctt 11829688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 27555346 - 27555485
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| | |||||||||||||||||||||||||||||||| |||| ||||||||||||||| | |||||||||||||||||||||||    
T  27555346 gtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcggacaggtatcggtgcagaatacgca 27555445  T
Q  152 ggga--acagtacgtcatccattttgaagtatcggggctt 189  Q
    | ||  || |||||||||||||||||||||||| ||||||    
T  27555446 gagaatacggtacgtcatccattttgaagtatcagggctt 27555485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 34238296 - 34238157
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| || |||||||||||||||||||||||||||||||  ||| ||||||| ||||||| |||||||||||||||||||||||||    
T  34238296 gtatcggataattattttttttaaaaataaaatttaatatttggatactctccgaatacgtatcggaaagtatcgggcaggtatcggtgcagaatacgca 34238197  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||||||||||||||||||||||||||||||    
T  34238196 ggggatacggtacgtcatccattttgaagtatcggggctt 34238157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 48163546 - 48163407
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| | |||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||    
T  48163546 gtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgca 48163447  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||||||| ||||||||||||||||||||||    
T  48163446 ggggatacggtacgtcacccattttgaagtatcggggctt 48163407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 40095788 - 40095649
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| | ||||||||||||||||||||| |||||||||| |||| ||||||| ||||||| ||||||||||||||||| |||||||    
T  40095788 gtatcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgca 40095689  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||||||||||||||||||||||||||||||    
T  40095688 ggggatacggtacgtcatccattttgaagtatcggggctt 40095649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 25969514 - 25969396
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagggaacag--tacgtcatcca 170  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||||| | |   |||||||||||    
T  25969514 aaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcatcca 25969415  T
Q  171 ttttgaagtatcggggctt 189  Q
    |||||||||||||||||||    
T  25969414 ttttgaagtatcggggctt 25969396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 26773689 - 26773828
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgc- 150  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| ||||||||||| ||||||     
T  26773689 gtatcagaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcgagaagtatcgggcagatatcggtgcaggatacgca 26773788  T
Q  151 aggga-acagtacgtcatccattttgaagtatcggggctt 189  Q
    ||||| ||  ||||||||| ||||| ||||||||||||||    
T  26773789 agggatacgatacgtcatcaattttaaagtatcggggctt 26773828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 182
Target Start/End: Original strand, 34122546 - 34122726
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcggaa----------aatgattttcttaaaaaataaaatttaatatttggatactctc 103  Q
    |||||||||||||||||||||| ||||||||| | |||||||||| |          ||| |||||   |||||||||||||||||||||||||||||||    
T  34122546 agaaatcaaaataatataaaaaacacaagtatccatgcgtatcgggatgtattggataattatttttaaaaaaaataaaatttaatatttggatactctc 34122645  T
Q  104 ccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcag-gga-acagtacgtcatccattttgaagtatc 182  Q
    | |||| ||||||||||||||| ||||||||||||||||| |||||||| ||| || ||||||||||||||||||||||||    
T  34122646 cagatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcagaggatacggtacgtcatccattttgaagtatc 34122726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 38263137 - 38262998
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    ||||| || ||| ||||| | |||||||||||||||||||||||||||||||| |||| ||||||| ||||||| ||||||||||| ||||| |||||||    
T  38263137 gtatcagataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcggaaagtatcgggcaggtatcgatgcaggatacgca 38263038  T
Q  152 ggga--acagtacgtcatccattttgaagtatcggggctt 189  Q
    | ||  || |||||||||||||||||||||||||||||||    
T  38263037 gagaatacggtacgtcatccattttgaagtatcggggctt 38262998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 16850924 - 16850785
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| |||||||||||||||||||||||||||||||| | |||| ||||||| ||||||| |||| |||||||||||  |||| ||    
T  16850924 gtatcggataattatttttttaaaaaataaaatttaatatttggatactcttcagatacgtatcggaaagtatcgggcaagtatcggtgcatgatacaca 16850825  T
Q  152 ggga--acagtacgtcatccattttgaagtatcggggctt 189  Q
    ||||  || ||||||||||||||||||| |||||||||||    
T  16850824 gggaatacggtacgtcatccattttgaaatatcggggctt 16850785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 73 - 180
Target Start/End: Original strand, 9250420 - 9250529
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagggaacag--tacgtcatcca 170  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||||| | |   |||||||||||    
T  9250420 aaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcatcca 9250519  T
Q  171 ttttgaagta 180  Q
    ||||||||||    
T  9250520 ttttgaagta 9250529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 189
Target Start/End: Original strand, 27397976 - 27398163
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtat----------cggaaaatgattttcttaaaaaataaaatttaatatttggatactctc 103  Q
    |||||||||||||||||||||| ||||||||| |||||||||          |||| ||| ||||| || ||||||||||||||||||||||||||||||    
T  27397976 agaaatcaaaataatataaaaaacacaagtatccgtgcgtattgagacgtatcggataattattttttttaaaaataaaatttaatatttggatactctc 27398075  T
Q  104 ccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    | ||||  ||| || |||||||  ||||||||| |||||| ||||||||||   ||||||||||||||||||| ||||||| ||||||    
T  27398076 cggatacatattggaaagtatcgagcaggtatcagtgcaggatacgcaggggatacagtacgtcatccattttaaagtatccgggctt 27398163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 52 - 183
Target Start/End: Original strand, 26845873 - 26846006
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| || |||||||||||||||||||||||||||||||  ||| ||||||||||||||  ||||||||||||||||| |||||||    
T  26845873 gtatcggataattattttttttaaaaataaaatttaatatttggatactctccaaatacgtatcgggaagtattgggcaggtatcggtgcaggatacgca 26845972  T
Q  152 -ggga-acagtacgtcatccattttgaagtatcg 183  Q
     | || || |||| ||||||||||||||||||||    
T  26845973 tgagatacggtacatcatccattttgaagtatcg 26846006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 42897177 - 42897001
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcggaaa----------atgattttcttaaaaaataaaatttaatatttggatactctc 103  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||          || ||||| | |||||||||||||||||||||||||||||||    
T  42897177 agaaatcaaaataatataaaaaacacaagtatccgtgcgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctc 42897078  T
Q  104 ccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    | |||| |||||||||||           ||||||||||| ||||||||||   || |||||||||||||||||||||||||||||||    
T  42897077 cggatacgtatcgggaag-----------tatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggctt 42897001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 189
Target Start/End: Complemental strand, 4291640 - 4291511
Alignment:
Q  51 cgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgc 150  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||           ||||||||||||||| | ||||||||||||||| ||||||    
T  4291640 cgtatcggaaaattattttcttaaaaaataaaatttaatatttggatac-----------gtatcgggaagtatcggacaggtatcggtgcaggatacgc 4291552  T
Q  151 aggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    ||||   || |||| ||||||||||| ||||||||||||||    
T  4291551 aggggatacggtacatcatccattttaaagtatcggggctt 4291511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 73 - 189
Target Start/End: Original strand, 44960133 - 44960251
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagggaacag--tacgtcatcca 170  Q
    ||||||||||||||||| |||||||||||| | ||||  |||||||||||||||| ||||| || |||||| |||||||||| | |   |||||||||||    
T  44960133 aaaaaataaaatttaatctttggatactcttctgatacatatcgggaagtatcagacaggtgtcagtgcaggatacgcaggggatacgatacgtcatcca 44960232  T
Q  171 ttttgaagtatcggggctt 189  Q
    |||||||||||||| ||||    
T  44960233 ttttgaagtatcggagctt 44960251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 75 - 189
Target Start/End: Complemental strand, 35159980 - 35159864
Alignment:
Q  75 aaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagggaacag--tacgtcatccatt 172  Q
    ||||||||||||||| || ||||||||||| |||| |||||||||||||| || || |||||||||||||||| |||||| | |   ||| |||||||||    
T  35159980 aaaataaaatttaatcttcggatactctcctgatacgtatcgggaagtattagacaagtatcggtgcagaatatgcaggggatacgatacatcatccatt 35159881  T
Q  173 ttgaagtatcggggctt 189  Q
    |||||||||||| ||||    
T  35159880 ttgaagtatcggagctt 35159864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 36202717 - 36202891
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcggaaa----------atgattttcttaaaaaataaaatttaatatttggatactctc 103  Q
    |||||||||||||||||||| | |||||||||  ||||||||||||||          || ||||| | |||||||||||||||||||||||||||||||    
T  36202717 agaaatcaaaataatataaagaacacaagtatctgtgcgtatcggaaagtatcagataattattttttaaaaaaataaaatttaatatttggatactctc 36202816  T
Q  104 ccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggg--aacagtacgtcatccattttgaagtatcgggg 186  Q
    | |||| ||||||          |||||| |||||||||| ||||||||||   || ||||||||||||||||||||||||||||    
T  36202817 cggatacgtatcg----------ggcaggcatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcgggg 36202891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 73 - 143
Target Start/End: Complemental strand, 21409508 - 21409438
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcag 143  Q
    ||||||||||||||||| |||||||||||||| |||| ||||||||| |||||||||||||||| ||||||    
T  21409508 aaaaaataaaatttaatctttggatactctcctgatacgtatcgggatgtatcaggcaggtatcagtgcag 21409438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 39520927 - 39520799
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| |||||   |||||||||||||||||||||||||||||||| |||| |||||||||||           ||||||||||| |||||||    
T  39520927 gtatcggataattatttttaaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaag-----------tatcggtgcaggatacgca 39520839  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||||||||||||||||||||||||||||||    
T  39520838 ggggatacggtacgtcatccattttgaagtatcggggctt 39520799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 180
Target Start/End: Complemental strand, 11058466 - 11058360
Alignment:
Q  76 aaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggg--aacagtacgtcatccattt 173  Q
    ||||||||||||||| |  ||||||||||| ||| ||||| | ||||||||| ||| ||||||||||| ||||||||||   || |||||||||||||||    
T  11058466 aaataaaatttaataatctgatactctcccaatacgtatctgaaagtatcagacagatatcggtgcaggatacgcaggggatacggtacgtcatccattt 11058367  T
Q  174 tgaagta 180  Q
    |||||||    
T  11058366 tgaagta 11058360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 65 - 189
Target Start/End: Complemental strand, 33454195 - 33454069
Alignment:
Q  65 attttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagggaacag--tac 162  Q
    ||||| ||||||||||||||||||| || ||||||| ||| |||| |||||| |||||||| | ||  |||| |||||| |||||||||| | |   |||    
T  33454195 atttttttaaaaaataaaatttaatcttcggatactttcctgatacgtatcgagaagtatctgacatatatcagtgcaggatacgcaggggatacgatac 33454096  T
Q  163 gtcatccattttgaagtatcggggctt 189  Q
    ||||||||||||||| |||||||||||    
T  33454095 gtcatccattttgaaatatcggggctt 33454069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 60 - 118
Target Start/End: Original strand, 16564364 - 16564422
Alignment:
Q  60 aaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcggg 118  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16564364 aaattattttattaaaaaataaaatttaatatttggatactctcccgatacgtatcggg 16564422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 16601298 - 16601240
Alignment:
Q  60 aaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcggg 118  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16601298 aaattattttattaaaaaataaaatttaatatttggatactctcccgatacgtatcggg 16601240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 94 - 188
Target Start/End: Original strand, 23079059 - 23079155
Alignment:
Q  94 ggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggg--aacagtacgtcatccattttgaagtatcggggct 188  Q
    ||||||||||| |||| ||||||||||||||| || |||||||| | ||| ||||||||||   || ||| ||||||||||||||||||||||||||    
T  23079059 ggatactctcctgatacgtatcgggaagtatcgggtaggtatcgatccaggatacgcaggggatacggtatgtcatccattttgaagtatcggggct 23079155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 47720148 - 47720220
Alignment:
Q  51 cgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagta 123  Q
    ||||||||| ||| ||||| | |||||||||||||||||||| ||||||||||| |||| |||||||||||||    
T  47720148 cgtatcggataattattttttaaaaaaataaaatttaatattcggatactctccggatacgtatcgggaagta 47720220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 182
Target Start/End: Original strand, 1363010 - 1363121
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagggaaca--gtacgtcatcca 170  Q
    |||||||||||||| ||||| ||||||||||| |||| |||||| ||||||||| ||| ||||| |||||  |||| ||||| | |  || | |||||||    
T  1363010 aaaaaataaaatttcatattcggatactctcctgatacgtatcgagaagtatcaagcatgtatcagtgcaagatacacaggggataatgttcatcatcca 1363109  T
Q  171 ttttgaagtatc 182  Q
    ||||||||||||    
T  1363110 ttttgaagtatc 1363121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 148
Target Start/End: Original strand, 18113916 - 18114012
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatac 148  Q
    |||||||| | | ||||| || |||||||||||||||| ||  |||||||||| ||||  |||| ||||||||||||||| ||||||||||| ||||    
T  18113916 gtatcggatacttattttttttaaaaataaaatttaatcttcagatactctcctgatacatatcaggaagtatcaggcagatatcggtgcaggatac 18114012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 148
Target Start/End: Complemental strand, 23311839 - 23311764
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatac 148  Q
    ||||||||||||||||| || ||||||||||| ||||  |||||||||||||||| ||  ||||||||||| ||||    
T  23311839 aaaaaataaaatttaatcttcggatactctcctgatacatatcgggaagtatcagacatatatcggtgcaggatac 23311764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 189
Target Start/End: Original strand, 47238597 - 47238723
Alignment:
Q  55 tcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggg 154  Q
    ||||| ||| ||||| | |||||||||||||||||||||||||||||||| ||||  |||||          ||||||||||||||||  ||||||||||    
T  47238597 tcggataattattttttaaaaaaataaaatttaatatttggatactctccagatacatatcg----------ggcaggtatcggtgcaatatacgcaggg 47238686  T
Q  155 --aacagtacgtcatccattttgaagtatcggggctt 189  Q
       ||  ||| ||||||||||||||||||||||||||    
T  47238687 gatacgatacatcatccattttgaagtatcggggctt 47238723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 34238354 - 34238310
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcgg 58  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||    
T  34238354 agaaatcaaaataatataaaaaacacaagtatccgtgcgtatcgg 34238310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 189
Target Start/End: Complemental strand, 38064710 - 38064594
Alignment:
Q  75 aaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca-ggga-acagtacgtcatccatt 172  Q
    |||||| |||||||| || ||||||||||| |||| ||||||| ||||||| | |||||||| |||||  ||||||| | || ||  || ||||||||||    
T  38064710 aaaatataatttaatcttcggatactctcctgatacgtatcggaaagtatcggtcaggtatcagtgcatgatacgcatgagatacgttatgtcatccatt 38064611  T
Q  173 ttgaagtatcggggctt 189  Q
    || ||||||||||||||    
T  38064610 ttaaagtatcggggctt 38064594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 36660616 - 36660551
Alignment:
Q  51 cgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgg 117  Q
    ||||||||| ||| ||||| |||||||||||||||||||||||| ||||||||  |||| |||||||    
T  36660616 cgtatcggataattatttt-ttaaaaaataaaatttaatatttgaatactctctggatacgtatcgg 36660551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 24956366 - 24956305
Alignment:
Q  75 aaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatc 136  Q
    ||||||||||||||| || ||||||||||  |||| ||||||| |||||||||||| |||||    
T  24956366 aaaataaaatttaatcttcggatactctcttgatacgtatcggaaagtatcaggcatgtatc 24956305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 26843912 - 26843956
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcgg 58  Q
    |||||||||||||||||||||| ||||||||| |||||| |||||    
T  26843912 agaaatcaaaataatataaaaaacacaagtatccgtgcggatcgg 26843956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 38263195 - 38263152
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcg 57  Q
    |||||||||||||||||||| | ||||||||| |||||||||||    
T  38263195 agaaatcaaaataatataaagaacacaagtatccgtgcgtatcg 38263152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 185
Target Start/End: Complemental strand, 44269863 - 44269729
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||  ||| ||||| ||||||| ||||||||||| ||  |||||||| | |||| ||||||  ||||||||| ||| |||  |||||| ||| |||    
T  44269863 gtatcggttaattatttttttaaaaattaaaatttaatcttcagatactctactgatacgtatcgaaaagtatcagacagatat-agtgcaggatatgca 44269765  T
Q  152 -ggga-acagtacgtcatccattttgaagtatcggg 185  Q
     |||| || ||||||||||||| |||||||||||||    
T  44269764 cgggataccgtacgtcatccatcttgaagtatcggg 44269729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 40041494 - 40041420
Alignment:
Q  75 aaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacg 149  Q
    ||||||||||||||| || ||||||||||| |||| |||||  |||||||||| || ||||| || ||| |||||    
T  40041494 aaaataaaatttaatcttcggatactctcctgatacgtatcaagaagtatcagacatgtatcagtacaggatacg 40041420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 11829886 - 11829841
Alignment:
Q  14 agaaatcaaaataatata-aaaagcacaagtattcgtgcgtatcgg 58  Q
    |||||||||||||||||| |||| ||||||||| ||||||||||||    
T  11829886 agaaatcaaaataatataaaaaaacacaagtatccgtgcgtatcgg 11829841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 40095847 - 40095802
Alignment:
Q  14 agaaatcaaaataatata-aaaagcacaagtattcgtgcgtatcgg 58  Q
    |||||||||||||||||| |||| ||||||||| ||||||||||||    
T  40095847 agaaatcaaaataatataaaaaaacacaagtatccgtgcgtatcgg 40095802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 2908230 - 2908306
Alignment:
Q  66 ttttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgca 142  Q
    |||| ||||||||||||| |||||  | || |||||||| |||| ||||||||  ||||||||||| ||||| ||||    
T  2908230 tttttttaaaaaataaaacttaattgtcgggtactctccagatacgtatcggggtgtatcaggcagatatcgctgca 2908306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 8056330 - 8056382
Alignment:
Q  71 ttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagta 123  Q
    ||||||||||||||||||| ||  |||||||||| |||| ||||||| |||||    
T  8056330 ttaaaaaataaaatttaatcttcagatactctcctgatacgtatcggaaagta 8056382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 16564415 - 16564470
Alignment:
Q  132 gtatcggtgcagaatacgcagggaaca--gtacgtcatccattttgaagtatcggg 185  Q
    ||||||| |||| |||||||||| | |  |||||||||||||||||||||||||||    
T  16564415 gtatcggggcaggatacgcaggggatacggtacgtcatccattttgaagtatcggg 16564470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 16601247 - 16601192
Alignment:
Q  132 gtatcggtgcagaatacgcagggaaca--gtacgtcatccattttgaagtatcggg 185  Q
    ||||||| |||| |||||||||| | |  |||||||||||||||||||||||||||    
T  16601247 gtatcggggcaggatacgcaggggatacggtacgtcatccattttgaagtatcggg 16601192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 38064784 - 38064729
Alignment:
Q  71 ttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcag 127  Q
    ||||||||||||||||||| || ||||||||||  |||| ||||| |||||||||||    
T  38064784 ttaaaaaataaaatttaatcttcggatactctcttgatacgtatc-ggaagtatcag 38064729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 3e-48; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 51 - 189
Target Start/End: Complemental strand, 5834972 - 5834832
Alignment:
Q  51 cgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgc 150  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||| ||||||    
T  5834972 cgtatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcgggaagcatcgggcaggtatcggtgcaggatacgc 5834873  T
Q  151 aggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    ||||   || |||||||||||||||||||||||||| ||||    
T  5834872 aggggatacggtacgtcatccattttgaagtatcggagctt 5834832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 14 - 185
Target Start/End: Original strand, 42472498 - 42472681
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcggaa----------aatgattttcttaaaaaataaaatttaatatttggatactctc 103  Q
    |||||||||||||||||||||| ||||||||| |||||||||||| |          ||| ||||| || ||||||||||||||||||||||||||||||    
T  42472498 agaaatcaaaataatataaaaaacacaagtatccgtgcgtatcgggatgtatcggataattattttttttaaaaataaaatttaatatttggatactctc 42472597  T
Q  104 ccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggga--acagtacgtcatccattttgaagtatcggg 185  Q
    | |||| |||| |||||||||| |||| |||||||||||| |||||||||||  ||||||||||||||||||||||||||||||    
T  42472598 cggatacgtattgggaagtatcgggcaagtatcggtgcaggatacgcagggaatacagtacgtcatccattttgaagtatcggg 42472681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 19738838 - 19738699
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| | |||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||    
T  19738838 gtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgca 19738739  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||||||||||||||||||||||||||||||    
T  19738738 ggggatacggtacgtcatccattttgaagtatcggggctt 19738699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 52122846 - 52122985
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    ||||| || ||| ||||| | |||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||    
T  52122846 gtatcagataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgca 52122945  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   ||||||||||||||||||||||||||||||||||    
T  52122946 ggggatacagtacgtcatccattttgaagtatcggggctt 52122985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 53 - 189
Target Start/End: Original strand, 5325699 - 5325837
Alignment:
Q  53 tatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcag 152  Q
    ||||||| ||| ||||| || ||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| ||||||||    
T  5325699 tatcggataattattttttttaaaaataaaatttaatatttggatactctccagatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcag 5325798  T
Q  153 gg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    ||   ||| ||||||||||||||| ||||||||||||||    
T  5325799 gggatacaatacgtcatccattttaaagtatcggggctt 5325837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 8064086 - 8064225
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| | ||||||||||||||||||||| |||||||||| |||| ||||||| ||||||| ||||||||||||||||| |||||||    
T  8064086 gtatcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgca 8064185  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||||||||||||||||||||||||||||||    
T  8064186 ggggatacggtacgtcatccattttgaagtatcggggctt 8064225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 28377137 - 28376998
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||  ||||||| || |||||||||||||| |||| ||    
T  28377137 gtattggaaaattattttcttaaaaaataaaatttaatatttggatactctcccggtacgtatcgaaaagtatcgggtaggtatcggtgcaggatacaca 28377038  T
Q  152 gg-ga-acagtacgtcatccattttgaagtatcggggctt 189  Q
    || || ||  ||||||||||||||||||||||||||||||    
T  28377037 ggagatacgatacgtcatccattttgaagtatcggggctt 28376998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 41145731 - 41145614
Alignment:
Q  74 aaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggg--aacagtacgtcatccat 171  Q
    |||||||||||||||||||||||||||||||  ||| ||||||| ||||||| | ||||||||| ||||| ||||||||||   ||||||||||||||||    
T  41145731 aaaaataaaatttaatatttggatactctccgaatacgtatcggaaagtatcggacaggtatcgatgcaggatacgcaggggatacagtacgtcatccat 41145632  T
Q  172 tttgaagtatcggggctt 189  Q
    ||||||||||||||||||    
T  41145631 tttgaagtatcggggctt 41145614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 52 - 181
Target Start/End: Complemental strand, 52721405 - 52721274
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| | ||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||| ||||||||||| |||||||    
T  52721405 gtatcggataattattttataaaaaaataaaatttaatatttggatactctccgaatacgtatcgggaagtatcaggcagatatcggtgcaggatacgca 52721306  T
Q  152 gggaacag--tacgtcatccattttgaagtat 181  Q
    ||| | |   ||||||||| ||||||||||||    
T  52721305 ggggatacgatacgtcatctattttgaagtat 52721274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 53322478 - 53322339
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgc- 150  Q
    |||||||| ||| ||||| | |||||||||||||||||||||||||||||||| |||| |||||||||||||||  || |||||| |||||| ||||||     
T  53322478 gtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgagccggtatcagtgcaggatacgca 53322379  T
Q  151 -agggaacagtacgtcatccattttgaagtatcggggctt 189  Q
     |||  ||  ||||||||||||||||||||||||||||||    
T  53322378 aaggatacgatacgtcatccattttgaagtatcggggctt 53322339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 40694211 - 40694072
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    ||||| || ||| ||||| | ||||||||||||||||| ||  |||||||||| |||| ||||||||||||||||  |||||||||||||||||||||||    
T  40694211 gtatcagataattattttataaaaaaataaaatttaatcttcagatactctcctgatacgtatcgggaagtatcaatcaggtatcggtgcagaatacgca 40694112  T
Q  152 -ggga-acagtacgtcatccattttgaagtatcggggctt 189  Q
     |||| ||  ||| ||||||||||||||||||||||||||    
T  40694111 tgggatacgatacatcatccattttgaagtatcggggctt 40694072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 38492246 - 38492375
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| | |||||||||||||||||||||||||||||||| |||| ||||||||          ||||||||||||||| |||||||    
T  38492246 gtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcggg----------caggtatcggtgcaggatacgca 38492335  T
Q  152 gggaa--cagtacgtcatccattttgaagtatcggggctt 189  Q
    ||| |  |||||||||||||||||||||||||||||||||    
T  38492336 ggggatacagtacgtcatccattttgaagtatcggggctt 38492375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 36511910 - 36512050
Alignment:
Q  52 gtatcggaaaatgattttcttaaaa-aataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgc 150  Q
    |||||||| ||| ||||| |||||| ||||||||||||| || ||||||||| | |||| ||||||| ||||||| |||| ||||||| |||| ||||||    
T  36511910 gtatcggataattatttttttaaaaaaataaaatttaatcttcggatactcttctgatacgtatcggaaagtatcgggcaagtatcggcgcaggatacgc 36512009  T
Q  151 a-ggga-acagtacgtcatccattttgaagtatcggggctt 189  Q
    | |||| ||| ||||||| ||||||||||||||||||||||    
T  36512010 acgggatacaatacgtcaaccattttgaagtatcggggctt 36512050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 185
Target Start/End: Original strand, 46431910 - 46432045
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| ||  ||||||||||||||| |||||||||||||  |||| ||||||||||||||||| ||||||||| ||||| ||| |||    
T  46431910 gtatcggataattatttttttttaaaataaaatttaatctttggatactctcttgatacgtatcgggaagtatcagtcaggtatcgttgcaggatatgca 46432009  T
Q  152 g-gga-acagtacgtcatccattttgaagtatcggg 185  Q
    | ||| ||  |||||||||| |||||||||||||||    
T  46432010 gaggatacgatacgtcatccgttttgaagtatcggg 46432045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 189
Target Start/End: Original strand, 37992510 - 37992649
Alignment:
Q  53 tatcggaaaatgattttcttaaaa-aataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgc- 150  Q
    ||||||| ||| ||||| |||||| ||||||||||||| |||||||||||| | |||| ||||||| ||||||||| || |||||||||||  || |||     
T  37992510 tatcggataattatttttttaaaaaaataaaatttaatctttggatactcttctgatacgtatcggaaagtatcagacatgtatcggtgcaagatccgca 37992609  T
Q  151 aggga-acagtacgtcatccattttgaagtatcggggctt 189  Q
    ||||| ||| |||||| |||||||||||||| ||| ||||    
T  37992610 agggatacaatacgtcttccattttgaagtaccggagctt 37992649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 53 - 139
Target Start/End: Complemental strand, 4400608 - 4400522
Alignment:
Q  53 tatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggt 139  Q
    ||||||| ||| ||||| || |||||||||||||||||||  |||||||||| |||| ||||||||||||||||| || ||||||||    
T  4400608 tatcggataattattttttttaaaaataaaatttaatattctgatactctcctgatacgtatcgggaagtatcagacaagtatcggt 4400522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 189
Target Start/End: Complemental strand, 17892366 - 17892250
Alignment:
Q  75 aaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca-ggga-acagtacgtcatccatt 172  Q
    ||||||||||||||| || ||||||||| | ||||  |||||||||||||| |||||||||||||| |  ||||||| | || || ||||||| ||||||    
T  17892366 aaaataaaatttaatcttcggatactcttctgatacatatcgggaagtatcgggcaggtatcggtgtatgatacgcatgagatacggtacgtcgtccatt 17892267  T
Q  173 ttgaagtatcggggctt 189  Q
    |||||||||||| ||||    
T  17892266 ttgaagtatcggagctt 17892250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 52 - 121
Target Start/End: Original strand, 3403562 - 3403631
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaag 121  Q
    |||||||| ||| ||||| ||  |||||||||||||||||||||||||||||| |||| |||||||||||    
T  3403562 gtatcggataattatttttttttaaaataaaatttaatatttggatactctccggatacgtatcgggaag 3403631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 52 - 125
Target Start/End: Complemental strand, 39957705 - 39957632
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatc 125  Q
    |||||||| ||| ||||| | |||||||||||||||||||| ||||||||||| |||| |||||| ||||||||    
T  39957705 gtatcggataattattttttaaaaaaataaaatttaatattcggatactctccggatacgtatcgagaagtatc 39957632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 2586477 - 2586338
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||| ||| ||| ||||| | |||||| ||| |||||| || ||||||||| | |||| |||| || ||||||| ||||||| |||||| || |||| ||    
T  2586477 gtataggataattattttttaaaaaaacaaattttaatcttcggatactcttctgatacgtattggaaagtatcgggcaggtgtcggtgaaggatactca 2586378  T
Q  152 gggaaca--gtacgtcatccattttgaagtatcggggctt 189  Q
    ||| | |  |||||||||||||||| ||||||||||||||    
T  2586377 ggggatacggtacgtcatccattttaaagtatcggggctt 2586338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 182
Target Start/End: Complemental strand, 21637785 - 21637674
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca--gggaacagtacgtcatcca 170  Q
    ||||||||||||||||| || ||||||||||| |||| |||||||||||||| ||  |||||||  ||||||||||  |  ||| |  | ||||||||||    
T  21637785 aaaaaataaaatttaatcttcggatactctcctgatacgtatcgggaagtataagagaggtatcaatgcagaatacatagggggtatgggacgtcatcca 21637686  T
Q  171 ttttgaagtatc 182  Q
    ||||||||||||    
T  21637685 ttttgaagtatc 21637674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 31226142 - 31226044
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcggaa----------aatgattttcttaaaaaataaaatttaatatttggatactct 102  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||          ||| ||||| | ||||||||||||||||||||||||||||||    
T  31226142 agaaatcaaaataatataaaaaacacaagtatccatgcgtatcggaaaatagcggataattattttttgaaaaaataaaatttaatatttggatactct 31226044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 189
Target Start/End: Complemental strand, 47607226 - 47607112
Alignment:
Q  76 aaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagg-ga-acagtacgtcatccattt 173  Q
    |||||||||||||| ||  ||| |||||| |||| ||||| |||| |||||||||| |||| |||||| ||||||||| || ||  || |||||||||||    
T  47607226 aaataaaatttaatcttcagatgctctcctgatacgtatcaggaaatatcaggcagatatc-gtgcaggatacgcaggagatacgatatgtcatccattt 47607128  T
Q  174 tgaagtatcggggctt 189  Q
    ||||||||||||||||    
T  47607127 tgaagtatcggggctt 47607112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 148
Target Start/End: Complemental strand, 21058944 - 21058878
Alignment:
Q  82 aatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatac 148  Q
    |||||||| |||||||||||||| |||| |||||||||| |||||| || |||||||||||| ||||    
T  21058944 aatttaatctttggatactctccagatacgtatcgggaaatatcagacatgtatcggtgcaggatac 21058878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 189
Target Start/End: Complemental strand, 51858931 - 51858834
Alignment:
Q  94 ggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgc-agaatacgcagg-ga-acagtacgtcatccattttgaagtatcggggctt 189  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| |||| || ||||||||| || ||  ||||||||||||||| ||||||||||||||    
T  51858931 ggatactctcctgatacgtatcgggaagtatcagacaggtatc-gtgcaaggatacgcaggagatacgatacgtcatccattttaaagtatcggggctt 51858834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 186
Target Start/End: Original strand, 55901116 - 55901252
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    ||||| || ||| ||||| || |||||||||||||||| || ||||| | ||| |||| |||||| |||||||| || | |||||||||||| |||| ||    
T  55901116 gtatcagataattattttttttaaaaataaaatttaatcttcggatattttcctgatacgtatcgagaagtatcgggtatgtatcggtgcaggatacaca 55901215  T
Q  152 gggaacag--tacgtcatccattttgaagtatcgggg 186  Q
    ||| | |   ||||||||| ||||| |||||||||||    
T  55901216 ggggatacgatacgtcatctattttaaagtatcgggg 55901252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 5325640 - 5325684
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcgg 58  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||    
T  5325640 agaaatcaaaataatataaaaaacacaagtatccgtgcgtatcgg 5325684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 14795084 - 14795025
Alignment:
Q  132 gtatcggtgcagaatacgcagggaaca--gtacgtcatccattttgaagtatcggggctt 189  Q
    |||||||||||| |||||||||| | |  |||||||||||||||||||||||||||||||    
T  14795084 gtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggctt 14795025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 138
Target Start/End: Complemental strand, 7429255 - 7429192
Alignment:
Q  75 aaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcgg 138  Q
    |||||| ||||||||  ||||||||||| |||||| |||||||| ||||||||| |||||||||    
T  7429255 aaaatagaatttaatcattggatactcttccgatacgtatcggggagtatcaggtaggtatcgg 7429192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 143
Target Start/End: Original strand, 24793708 - 24793799
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcag 143  Q
    ||||| || ||| ||||| ||||||||||||||||||| || ||||||||| | |||| ||||||  |||||| || ||||||||| |||||    
T  24793708 gtatcagataattatttttttaaaaaataaaatttaatcttcggatactcttctgatacgtatcgaaaagtattagacaggtatcgatgcag 24793799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 14795191 - 14795078
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcggaa----------aatgattttcttaaaaaataaaatttaatatttggatactctc 103  Q
    |||||||||||||||||||||| ||||||||| |||| ||||||| |          ||| ||||| | ||| || ||||||||||||||||||||||||    
T  14795191 agaaatcaaaataatataaaaaacacaagtatccgtgtgtatcgggatgtatcggataattattttttaaaagaaaaaaatttaatatttggatactctc 14795092  T
Q  104 ccgatatgtatcgg 117  Q
    | |||| |||||||    
T  14795091 cggatacgtatcgg 14795078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 189
Target Start/End: Complemental strand, 10257775 - 10257702
Alignment:
Q  118 gaagtatcaggcaggtatcggtgcagaatacgcag-gga-acagtacgtcatccattttgaagtatcggggctt 189  Q
    |||||||| ||||||||||| | |||||||||||| ||| ||  ||| ||||||||||||||||||||||||||    
T  10257775 gaagtatcgggcaggtatcgatacagaatacgcagcggatacgatacatcatccattttgaagtatcggggctt 10257702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 52572329 - 52572278
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcc 104  Q
    |||||||| ||| ||||| ||||||| ||||||||||||||||||||||||||    
T  52572329 gtatcggataattatttttttaaaaa-taaaatttaatatttggatactctcc 52572278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 52122788 - 52122831
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcg 57  Q
    |||||||||||||||||||| | ||||||||| |||||||||||    
T  52122788 agaaatcaaaataatataaagaacacaagtatccgtgcgtatcg 52122831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 19738897 - 19738852
Alignment:
Q  14 agaaatcaaaataatata-aaaagcacaagtattcgtgcgtatcgg 58  Q
    |||||||||||||||||| |||| ||||||||| ||||||||||||    
T  19738897 agaaatcaaaataatataaaaaaacacaagtatccgtgcgtatcgg 19738852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 31946203 - 31946268
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgg 117  Q
    |||||||| ||| ||||| || |||||||||||||||| || ||||||||| | |||| |||||||    
T  31946203 gtatcggataattattttttttaaaaataaaatttaatcttcggatactcttctgatacgtatcgg 31946268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 52572387 - 52572346
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtat 55  Q
    |||||| ||||||||||||||| ||||||||| |||||||||    
T  52572387 agaaataaaaataatataaaaaacacaagtatccgtgcgtat 52572346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 53322537 - 53322492
Alignment:
Q  14 agaaatcaaaataatata-aaaagcacaagtattcgtgcgtatcgg 58  Q
    |||||||||||||||||| |||| ||||||||| ||||||||||||    
T  53322537 agaaatcaaaataatataaaaaaacacaagtatccgtgcgtatcgg 53322492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 152
Target Start/End: Original strand, 44121879 - 44121919
Alignment:
Q  112 tatcgggaagtatcaggcaggtatcggtgcagaatacgcag 152  Q
    |||| ||||||||| ||||||||||||||||| ||||||||    
T  44121879 tatcaggaagtatcgggcaggtatcggtgcaggatacgcag 44121919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 4e-44; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 30918557 - 30918380
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgta 113  Q
    |||||| |||||||||||||||  | |||||| ||||||||||||| ||| ||||| | ||| ||||||| ||||||||| ||||||||||  ||| |||    
T  30918557 agaaataaaaataatataaaaaatataagtatccgtgcgtatcggataattattttttaaaacaataaaaattaatattttgatactctccgaatacgta 30918458  T
Q  114 tcgggaagtatcaggcaggtatcggtgcagaatacgcaggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||||||||||| ||||||||||||||||| ||||||||||   ||| ||||||||||||||||||||||||||||||    
T  30918457 tcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacaatacgtcatccattttgaagtatcggggctt 30918380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 14 - 189
Target Start/End: Original strand, 1639712 - 1639898
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcggaa----------aatgattttcttaaaaaataaaatttaatatttggatactctc 103  Q
    |||||||||||||||||||||| ||||||||| |||||||||||| |          ||| ||||| |||||| |||||||||||||||||||||||||     
T  1639712 agaaatcaaaataatataaaaaacacaagtatccgtgcgtatcgggacgtatcggataattatttttttaaaa-ataaaatttaatatttggatactctt 1639810  T
Q  104 ccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    | |||| ||||||||||||||| ||||||||||||||||| ||||||||||   ||||||||||||||||||||||||||||||||||    
T  1639811 cggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacagtacgtcatccattttgaagtatcggggctt 1639898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 32707808 - 32707947
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    ||||| || ||| ||||| | |||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||    
T  32707808 gtatcagataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgca 32707907  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||||||||||||||||||||||||||||||    
T  32707908 ggggatacggtacgtcatccattttgaagtatcggggctt 32707947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 39690740 - 39690879
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| | |||||||||||||||||||||||||||||||| |||| ||||| ||||||||| ||||||||||||||||| |||||||    
T  39690740 gtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcaggaagtatcgggcaggtatcggtgcaggatacgca 39690839  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||||||||||||||||||||||||||||||    
T  39690840 ggggatacggtacgtcatccattttgaagtatcggggctt 39690879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 71 - 189
Target Start/End: Complemental strand, 33829875 - 33829755
Alignment:
Q  71 ttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggg--aacagtacgtcatc 168  Q
    |||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||| ||||||||||   || ||||||||||    
T  33829875 ttaaaaaaaaaaatttaatatttggatactctccggatacgtatcgggaagtatcaggcatgtatcggtgcaggatacgcaggggatacggtacgtcatc 33829776  T
Q  169 cattttgaagtatcggggctt 189  Q
    |||||||||||||||||||||    
T  33829775 cattttgaagtatcggggctt 33829755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 73 - 189
Target Start/End: Original strand, 30777520 - 30777638
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgc-aggga-acagtacgtcatcca 170  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| |||||| ||||| ||  |||||||||||    
T  30777520 aaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaagggatacgatacgtcatcca 30777619  T
Q  171 ttttgaagtatcggggctt 189  Q
    |||||||||||||||||||    
T  30777620 ttttgaagtatcggggctt 30777638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 30284584 - 30284723
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| ||  ||||||||||||||| || ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||    
T  30284584 gtatcggataattatttttttttaaaataaaatttaatcttcggatactctcctgatacgtatcgggaagtatcaggcaggtatcggtgcaggatacgca 30284683  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||||||||||||||||||||||||| ||||    
T  30284684 ggggatacggtacgtcatccattttgaagtatcggagctt 30284723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 10656960 - 10656822
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    ||||| |||||| ||||||||||||||  ||||| ||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||| |||||||    
T  10656960 gtatcagaaaattattttcttaaaaaaataaatt-aatatttggatactctcccgatacgtatcgagaagtatcgggcaggtatcggtgcaggatacgca 10656862  T
Q  152 gggaacag--tacgtcatccattttgaagtatcggggctt 189  Q
    ||| | |   ||||||||||||||| ||||||||||||||    
T  10656861 ggggatacgatacgtcatccattttaaagtatcggggctt 10656822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 5986007 - 5986146
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgta 113  Q
    |||||||||||||||||||||| |||||| || ||| ||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||| ||| |||    
T  5986007 agaaatcaaaataatataaaaaacacaagcatccgtacgtattggaaaattatttttttaaaaaataaaatttaatatttggatactctcccaatacgta 5986106  T
Q  114 tcgggaagtatcaggcaggtatcggtgcagaatacgcagg 153  Q
    || | ||||||| | ||  ||||| ||||| |||||||||    
T  5986107 tcagaaagtatcggacatatatcgatgcaggatacgcagg 5986146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 74 - 190
Target Start/End: Complemental strand, 11906337 - 11906219
Alignment:
Q  74 aaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggga--acagtacgtcatccat 171  Q
    ||||||||||||||||||| ||||||||||| |||| ||||||||||||||| | ||| ||||||||||| |||||||||||  ||| ||||||||||||    
T  11906337 aaaaataaaatttaatattcggatactctccggatacgtatcgggaagtatcggacagatatcggtgcaggatacgcagggaatacaatacgtcatccat 11906238  T
Q  172 tttgaagtatcggggcttt 190  Q
    |||||||||||| ||||||    
T  11906237 tttgaagtatcgaggcttt 11906219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 52 - 190
Target Start/End: Complemental strand, 26691757 - 26691617
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| |||||   ||||||||||||||||| || ||||||||||  |||| ||||||||||||||||| |||||||||||||||||||||||    
T  26691757 gtatcggataattatttttaaaaaaaataaaatttaatcttcggatactctcttgatacgtatcgggaagtatcagacaggtatcggtgcagaatacgca 26691658  T
Q  152 gggaacag--tacgtcatccattttgaagtatcggggcttt 190  Q
    ||| | |   ||||||||| |||||||||||||||||||||    
T  26691657 ggggatacgatacgtcatctattttgaagtatcggggcttt 26691617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 52 - 190
Target Start/End: Complemental strand, 26961489 - 26961349
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| |||||   ||||||||||||||||| || ||||||||||  |||| ||||||||||||||||| |||||||||||||||||||||||    
T  26961489 gtatcggataattatttttaaaaaaaataaaatttaatcttcggatactctcttgatacgtatcgggaagtatcagacaggtatcggtgcagaatacgca 26961390  T
Q  152 gggaacag--tacgtcatccattttgaagtatcggggcttt 190  Q
    ||| | |   ||||||||| |||||||||||||||||||||    
T  26961389 ggggatacgatacgtcatctattttgaagtatcggggcttt 26961349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 9792460 - 9792321
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||| ||| ||| ||||| | |||||||||||||||||||||||||||||||  |||| ||||||||||||||| ||||||||||| ||||| |||| ||    
T  9792460 gtattggataattattttttaaaaaaataaaatttaatatttggatactctctggatacgtatcgggaagtatcgggcaggtatcgatgcaggatacaca 9792361  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||||||||||||||| ||||||||||||||    
T  9792360 ggggatacggtacgtcatccattttaaagtatcggggctt 9792321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 26716414 - 26716275
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| | ||||||||||||||||| || ||||||||| | |||| |||||||||||||||||||||||||||||| || |||||||    
T  26716414 gtatcggataattattttttaaaaaaataaaatttaatcttcggatactcttctgatacgtatcgggaagtatcaggcaggtatcggtgtaggatacgca 26716315  T
Q  152 gggaacag--tacgtcatccattttgaagtatcggggctt 189  Q
    ||| | |   |||||||||||||||||||||||| |||||    
T  26716314 ggggatacgatacgtcatccattttgaagtatcgaggctt 26716275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 26986154 - 26986015
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| | ||||||||||||||||| || ||||||||| | |||| |||||||||||||||||||||||||||||| || |||||||    
T  26986154 gtatcggataattattttttaaaaaaataaaatttaatcttcggatactcttctgatacgtatcgggaagtatcaggcaggtatcggtgtaggatacgca 26986055  T
Q  152 gggaacag--tacgtcatccattttgaagtatcggggctt 189  Q
    ||| | |   |||||||||||||||||||||||| |||||    
T  26986054 ggggatacgatacgtcatccattttgaagtatcgaggctt 26986015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 75 - 182
Target Start/End: Original strand, 41392712 - 41392821
Alignment:
Q  75 aaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggg--aacagtacgtcatccatt 172  Q
    ||||||||||||||||||||||||||| || ||||  |||||||||||||| ||||||||||||||||| ||||||||||   || ||||||||||||||    
T  41392712 aaaataaaatttaatatttggatactccccggatacatatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccatt 41392811  T
Q  173 ttgaagtatc 182  Q
    ||||||||||    
T  41392812 ttgaagtatc 41392821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 51 - 189
Target Start/End: Original strand, 32728685 - 32728825
Alignment:
Q  51 cgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgc 150  Q
    ||||| ||| ||| ||||| |||||||||||||| ||||||||||||||||||| |||| ||||||||||||||| ||||||||||| ||||  ||||||    
T  32728685 cgtattggataattatttttttaaaaaataaaatctaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcgatgcaagatacgc 32728784  T
Q  151 aggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    ||||   ||| ||| ||||| ||||||||||||||| ||||    
T  32728785 aggggatacaatacatcatcaattttgaagtatcggagctt 32728825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 32625018 - 32624879
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| | |||||||||||||||||||||||||||||| |  ||| ||||||||||||||| ||||||||||| ||||  |||| ||    
T  32625018 gtatcggataattattttttaaaaaaataaaatttaatatttggatactcttcgaatacgtatcgggaagtatcgggcaggtatcgatgcaagatacaca 32624919  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || ||||||||||||||||||| |||||||||||    
T  32624918 ggggatacggtacgtcatccattttgaaatatcggggctt 32624879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 197 - 267
Target Start/End: Original strand, 16291634 - 16291704
Alignment:
Q  197 tttttccagaaacattactgcaaaacagagaattattgttattgttactacctcgttctaattgatgatag 267  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16291634 tttttccaaaaacattactgcagaacagagaattattgttattgttactacctcgttctaattgatgatag 16291704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 73 - 189
Target Start/End: Original strand, 17138252 - 17138369
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagggaaca-gtacgtcatccat 171  Q
    ||||||||||||||||| || ||||| ||||| |||| ||||||||||||||||||||  ||||||||||| |||||||||| | |  ||||||||| ||    
T  17138252 aaaaaataaaatttaatcttcggatattctcctgatacgtatcgggaagtatcaggcaattatcggtgcaggatacgcaggggatacatacgtcatctat 17138351  T
Q  172 tttgaagtatcggggctt 189  Q
    ||||||||||||||||||    
T  17138352 tttgaagtatcggggctt 17138369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 1795512 - 1795394
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggg--aacagtacgtcatcca 170  Q
    ||||||||||||||||| || ||||||||| | |||| ||||||| ||||||| ||||||||||||||||| ||||| ||||   ||  ||||||| |||    
T  1795512 aaaaaataaaatttaatcttcggatactcttctgatacgtatcggaaagtatcgggcaggtatcggtgcaggatacggaggggatacgatacgtcaacca 1795413  T
Q  171 ttttgaagtatcggggctt 189  Q
    |||||||||||||||||||    
T  1795412 ttttgaagtatcggggctt 1795394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 71 - 181
Target Start/End: Original strand, 3934784 - 3934896
Alignment:
Q  71 ttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagggaacag--tacgtcatc 168  Q
    ||||||||||||||||||| || ||||||||||| |||| ||||||| |||||||||| |||||||||||| | |||||||||| | |   |||||||||    
T  3934784 ttaaaaaataaaatttaatcttcggatactctcctgatacgtatcggtaagtatcaggtaggtatcggtgcgggatacgcaggggatataatacgtcatc 3934883  T
Q  169 cattttgaagtat 181  Q
    |||||| ||||||    
T  3934884 cattttaaagtat 3934896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 12852249 - 12852121
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| | |||||||||||||||||||||||||||||||| |||| ||||| ||||           |||||||||||| |||||||    
T  12852249 gtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcaggaa-----------gtatcggtgcaggatacgca 12852161  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||||||||||||||||||||||||||||||    
T  12852160 ggggatacggtacgtcatccattttgaagtatcggggctt 12852121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 26794981 - 26795054
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatc 125  Q
    |||||||| ||| ||||| |||||||||||||||||||||||||||||||||| |||| ||||||| |||||||    
T  26794981 gtatcggataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcggaaagtatc 26795054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 34032510 - 34032423
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggt 139  Q
    ||||| || ||| ||||| ||||||||||||| ||||| || ||||||||||| |||| |||||||||||||||| ||||||||||||    
T  34032510 gtatcagataattatttttttaaaaaataaaaattaatcttcggatactctcctgatacgtatcgggaagtatcaagcaggtatcggt 34032423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 156
Target Start/End: Complemental strand, 9653885 - 9653802
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagggaa 156  Q
    |||||||||||||||||  |   ||||||| |||||| ||||||||||||||| ||||  ||||||||||||||||||||||||    
T  9653885 aaaaaataaaatttaatcatccaatactcttccgatacgtatcgggaagtatcgggcaaatatcggtgcagaatacgcagggaa 9653802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 174
Target Start/End: Complemental strand, 21251585 - 21251482
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagg-ga-acagtacgtcatcca 170  Q
    ||||||| |||||||||||| ||||||||||| |||| ||||||| ||||||||| ||| ||| ||||||||||| | ||| || || ||||||||||||    
T  21251585 aaaaaattaaatttaatattcggatactctcctgatacgtatcggaaagtatcagacagatattggtgcagaataagtaggagatacggtacgtcatcca 21251486  T
Q  171 tttt 174  Q
    ||||    
T  21251485 tttt 21251482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 154
Target Start/End: Complemental strand, 22774664 - 22774593
Alignment:
Q  83 atttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggg 154  Q
    ||||||||||||||||||||| ||||| ||||||| ||||||| ||||| ||||||||||| ||| ||||||    
T  22774664 atttaatatttggatactctctcgatacgtatcggaaagtatcgggcagatatcggtgcaggatatgcaggg 22774593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 154
Target Start/End: Complemental strand, 5722128 - 5722026
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    ||||| || ||| ||||| || |||||||||||||||| || ||||||| ||| ||||||||| | |||||||| |||| ||||| |||||| |||||||    
T  5722128 gtatcagataattattttttttaaaaataaaatttaatcttcggatactttcctgatatgtattgagaagtatcgggcatgtatcagtgcaggatacgca 5722029  T
Q  152 ggg 154  Q
    |||    
T  5722028 ggg 5722026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 71 - 181
Target Start/End: Original strand, 42366099 - 42366211
Alignment:
Q  71 ttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggg--aacagtacgtcatc 168  Q
    ||||||||||| | ||||| || ||||| ||||| |||| |||| ||||| |||| |||||||||| |||||| ||||||||||   ||||||| |||||    
T  42366099 ttaaaaaataataattaatcttcggatattctcctgataggtattgggaaatatcgggcaggtatcagtgcaggatacgcaggggatacagtacatcatc 42366198  T
Q  169 cattttgaagtat 181  Q
     ||||||||||||    
T  42366199 tattttgaagtat 42366211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 5612419 - 5612558
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| | ||||||||||||||||| || ||||||||||| | || ||||| | ||||||| ||||| ||||  ||||| || | ||    
T  5612419 gtatcggataattattttttaaaaaaataaaatttaatcttcggatactctcctggtacgtatcagaaagtatcgggcagttatcaatgcaggatgcaca 5612518  T
Q  152 ggga--acagtacgtcatccattttgaagtatcggggctt 189  Q
    | ||  ||  ||||||||||||||||||||||| ||||||    
T  5612519 gagaatacgatacgtcatccattttgaagtatctgggctt 5612558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 148
Target Start/End: Original strand, 43357736 - 43357832
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatac 148  Q
    |||||||| ||| ||||| | ||||||||||||||||| || |||||||||    ||| ||||||| ||||||||| ||||||||||||||| ||||    
T  43357736 gtatcggataattattttttaaaaaaataaaatttaatcttcggatactcttttaatacgtatcggaaagtatcagacaggtatcggtgcaggatac 43357832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 1920953 - 1920878
Alignment:
Q  76 aaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||| ||||||||| || |||||||||||| ||| |||||||||||||||| |||| ||||||||||  |||||||    
T  1920953 aaatgaaatttaatcttcggatactctcccaatacgtatcgggaagtatcatgcagatatcggtgcatgatacgca 1920878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 182
Target Start/End: Complemental strand, 41233477 - 41233388
Alignment:
Q  95 gatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggga--acagtacgtcatccattttgaagtatc 182  Q
    |||||||||| |||| ||||||||||||||||| || |||||| ||||| ||||| ||| |  ||  |||||||||||||||||||||||    
T  41233477 gatactctcctgatacgtatcgggaagtatcagacatgtatcgttgcaggatacgtaggaaatacgatacgtcatccattttgaagtatc 41233388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 3701317 - 3701237
Alignment:
Q  74 aaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggg 154  Q
    |||||||||||||||| ||  |||||||||| || |  |||| ||||||||||| ||| ||||||||||| ||||||||||    
T  3701317 aaaaataaaatttaatcttcagatactctcctgaaacatatcaggaagtatcagacagatatcggtgcaggatacgcaggg 3701237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 189
Target Start/End: Original strand, 35746271 - 35746367
Alignment:
Q  95 gatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagg-ga-acagtacgtcatccattttgaagtatcggggctt 189  Q
    |||||||||| |||| ||||||| |||||| |||||||||||| ||||  ||||| ||| || ||| ||||||||| ||||||||||||||| ||||    
T  35746271 gatactctcctgatacgtatcggaaagtattaggcaggtatcgatgcatgatacgtaggagatacaatacgtcatctattttgaagtatcggagctt 35746367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 41392631 - 41392675
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcgg 58  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||    
T  41392631 agaaatcaaaataatataaaaaacacaagtatccgtgcgtatcgg 41392675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 6243168 - 6243274
Alignment:
Q  74 aaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcag-gga-acagtacgtcatccat 171  Q
    ||||||||||||||||||| ||||||||||| |||| ||||||| |||||||           ||||||| |||||||| ||| ||| ||||||||||||    
T  6243168 aaaaataaaatttaatattcggatactctccggatacgtatcggaaagtatc-----------ggtgcaggatacgcagaggatacaatacgtcatccat 6243256  T
Q  172 tttgaagtatcggggctt 189  Q
    ||||||||||||| ||||    
T  6243257 tttgaagtatcggagctt 6243274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 32625076 - 32625033
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcg 57  Q
    |||||||||||||||||||||| ||||||||| |||||||||||    
T  32625076 agaaatcaaaataatataaaaaacacaagtatccgtgcgtatcg 32625033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 7977382 - 7977316
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcggg 118  Q
    |||||||| ||| ||||| | ||||||||||||||||||||| ||||||||||  ||| ||||||||    
T  7977382 gtatcggataattattttttaaaaaaataaaatttaatatttagatactctccgaatacgtatcggg 7977316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 149
Target Start/End: Original strand, 18001963 - 18002036
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacg 149  Q
    ||||||||||||||||| ||   ||||||||| |||||||||||||||||||   |||||||||| ||||| |||||    
T  18001963 aaaaaataaaatttaatcttcaaatactctcctgatatgtatcgggaagtat---gcaggtatcgatgcaggatacg 18002036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 15066256 - 15066183
Alignment:
Q  75 aaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatac 148  Q
    |||||||||||||||  |  |||||||| |||||| ||||||| || |||| ||||| ||||||||||||||||    
T  15066256 aaaataaaatttaatcatctgatactcttccgatacgtatcggaaaatatcgggcagatatcggtgcagaatac 15066183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 7629177 - 7629125
Alignment:
Q  75 aaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcag 127  Q
    ||||||||||||||| ||  |||||||||| |||| |||||||||||||||||    
T  7629177 aaaataaaatttaatcttcagatactctcctgatacgtatcgggaagtatcag 7629125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 182
Target Start/End: Complemental strand, 14836500 - 14836390
Alignment:
Q  74 aaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagggaa--cagtacgtcatccat 171  Q
    ||||| |||| |||||||| ||||||||| | |||| ||||||| || |||| | ||  ||||| ||||| |||||||||| |  || ||||||| ||||    
T  14836500 aaaaaaaaaaattaatattcggatactcttctgatacgtatcggaaaatatcggacaaatatcgatgcaggatacgcaggggatacaatacgtcaaccat 14836401  T
Q  172 tttgaagtatc 182  Q
    |||||||||||    
T  14836400 tttgaagtatc 14836390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 32707750 - 32707793
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcg 57  Q
    |||||||||||||||||||| | ||||||||| |||||||||||    
T  32707750 agaaatcaaaataatataaagaacacaagtatccgtgcgtatcg 32707793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 152
Target Start/End: Complemental strand, 12190503 - 12190426
Alignment:
Q  75 aaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcag 152  Q
    ||||||||||||||| | || ||||||||| |||| |||||  |||||||| | ||| |||| |||||| ||||||||    
T  12190503 aaaataaaatttaatctctgaatactctcctgatacgtatcaagaagtatcggacagatatcagtgcaggatacgcag 12190426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 12852300 - 12852255
Alignment:
Q  14 agaaatcaaaataatata-aaaagcacaagtattcgtgcgtatcgg 58  Q
    |||||||||||||||||| |||| ||||||||| ||||||||||||    
T  12852300 agaaatcaaaataatataaaaaaacacaagtatccgtgcgtatcgg 12852255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 139
Target Start/End: Complemental strand, 27085483 - 27085418
Alignment:
Q  74 aaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggt 139  Q
    |||||||||||||||| |  ||||||||||  |||| ||||||| |||||||| |||| |||||||    
T  27085483 aaaaataaaatttaatttccggatactctcttgatacgtatcggaaagtatcatgcagatatcggt 27085418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 35618190 - 35618113
Alignment:
Q  72 taaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacg 149  Q
    |||||||| ||||| ||| |||| |||||||   |||||||||||  |||||||| |||| ||||||||||| |||||    
T  35618190 taaaaaattaaattaaatttttgaatactcttttgatatgtatcgaaaagtatcaagcagatatcggtgcaggatacg 35618113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 32728638 - 32728682
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcgg 58  Q
    |||||| ||||||||||||||| |||||||||  |||||||||||    
T  32728638 agaaataaaaataatataaaaaacacaagtatcagtgcgtatcgg 32728682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0640 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 8069 - 8208
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    ||||| || ||| ||||| || ||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||    
T  8069 gtatcagataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgca 8168  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||| ||||||||||||||||||||||||||    
T  8169 ggggatacggtacatcatccattttgaagtatcggggctt 8208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0640; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 8011 - 8054
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcg 57  Q
    |||||||||||||||||||| | ||||||||| |||||||||||    
T  8011 agaaatcaaaataatataaagaacacaagtatccgtgcgtatcg 8054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 4e-38; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 1036803 - 1036942
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| | ||||||||||||||||||||| |||||||||| |||| ||||||| ||||||| ||||||||||||||||| |||||||    
T  1036803 gtatcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgca 1036902  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   || |||||||||||||||||||||||||||||||    
T  1036903 ggggatacggtacgtcatccattttgaagtatcggggctt 1036942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 52 - 181
Target Start/End: Original strand, 31195846 - 31195977
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||    
T  31195846 gtatcggataattatttttttaaaaaataaaatttaatatttggatactctccagatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgca 31195945  T
Q  152 gggaacag--tacgtcatccattttgaagtat 181  Q
    ||| | |   ||||||||||||||||||||||    
T  31195946 ggggatacgatacgtcatccattttgaagtat 31195977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 189
Target Start/End: Original strand, 7188708 - 7188892
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcggaa----------aatgattttcttaaaaaataaaatttaatatttggatactctc 103  Q
    |||||||||||||||||||||| ||||||||| |||||||||||| |          ||| ||||| || ||||||||||||||||||||||||||||||    
T  7188708 agaaatcaaaataatataaaaaacacaagtatccgtgcgtatcgggatgtatcggataattattttttttaaaaataaaatttaatatttggatactctc 7188807  T
Q  104 ccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagggaacagtacg--tcatccattttgaagtatcggggctt 189  Q
    | |||| ||||| ||||||||||||||||||||||||||| |||||||||| |   ||||   |||||||||||||||||||||||||    
T  7188808 cggatacgtatcaggaagtatcaggcaggtatcggtgcaggatacgcagggga---tacggtacatccattttgaagtatcggggctt 7188892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 51 - 189
Target Start/End: Complemental strand, 3212619 - 3212479
Alignment:
Q  51 cgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgc 150  Q
    ||||||||| ||| ||||| | |||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||| ||||||||||| |||| |    
T  3212619 cgtatcggataattattttataaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcagatatcggtgcaggatacac 3212520  T
Q  151 aggga--acagtacgtcatccattttgaagtatcggggctt 189  Q
    | |||  ||  ||||||||||||||||||||||||||||||    
T  3212519 aaggaatacgatacgtcatccattttgaagtatcggggctt 3212479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 52 - 182
Target Start/End: Complemental strand, 8357099 - 8356967
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| |||||||||||||||||||||||||||||||| | |||| ||||||||||||||| | ||||||||||||||| |||||||    
T  8357099 gtatcggataattatttttttaaaaaataaaatttaatatttggatactcttcggatacgtatcgggaagtatcggacaggtatcggtgcaggatacgca 8357000  T
Q  152 ggg--aacagtacgtcatccattttgaagtatc 182  Q
    |||   || ||||||||||||||||||||||||    
T  8356999 ggggatacggtacgtcatccattttgaagtatc 8356967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 51 - 189
Target Start/End: Original strand, 32130635 - 32130775
Alignment:
Q  51 cgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgc 150  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||   |||||||| |||||| ||||||    
T  32130635 cgtatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcctgatacgtatcgggaaatatcgaacaggtatcagtgcaggatacgc 32130734  T
Q  151 aggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    ||||   || ||||||||| |||||| ||||||||||||||    
T  32130735 aggggatacggtacgtcattcattttaaagtatcggggctt 32130775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 55 - 186
Target Start/End: Original strand, 25834476 - 25834609
Alignment:
Q  55 tcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca-gg 153  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||| ||| |||| |||||| ||| ||||||||| ||||| |||||| ||||||| ||    
T  25834476 tcggaaaattattttattaaaaaataaaatttaatatttggatactgtcctgatacgtatcgagaaatatcaggcatgtatcagtgcaggatacgcacgg 25834575  T
Q  154 ga-acagtacgtcatccattttgaagtatcgggg 186  Q
    || ||  ||||||||||| |||||||||||||||    
T  25834576 gatacgatacgtcatccaatttgaagtatcgggg 25834609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 26327295 - 26327157
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| || |||||||||||||||| || ||||||||||   ||| ||||||||||||||| ||||||||||||||||| |||| ||    
T  26327295 gtatcggataattattttttttaaaaataaaatttaatcttcggatactctctt-atacgtatcgggaagtatcgggcaggtatcggtgcaggatacaca 26327197  T
Q  152 gg-ga-acagtacgtcatccattttgaagtatcggggctt 189  Q
    || || ||  ||||||||||||||||||||||||||||||    
T  26327196 ggagatacgatacgtcatccattttgaagtatcggggctt 26327157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 76 - 189
Target Start/End: Complemental strand, 27084102 - 27083987
Alignment:
Q  76 aaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagggaacag--tacgtcatccattt 173  Q
    |||||||||||||| ||||||||||||||  ||| |||| |||||||||   |||||||||||||||| |||||||||| | |   ||||||||||||||    
T  27084102 aaataaaatttaatctttggatactctccttatacgtattgggaagtattgagcaggtatcggtgcaggatacgcaggggatacgatacgtcatccattt 27084003  T
Q  174 tgaagtatcggggctt 189  Q
    ||||||||||||||||    
T  27084002 tgaagtatcggggctt 27083987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 234426 - 234308
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagg-ga-acagtacgtcatcca 170  Q
    |||||| |||| ||||| || ||||||||| | |||| ||||||| ||||||| ||||||||||||||||| ||||||||| || ||  ||||||| |||    
T  234426 aaaaaaaaaaagttaatcttcggatactcttctgatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcaggagatacgatacgtcaacca 234327  T
Q  171 ttttgaagtatcggggctt 189  Q
    |||||||||||||||||||    
T  234326 ttttgaagtatcggggctt 234308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 189
Target Start/End: Complemental strand, 3299259 - 3299143
Alignment:
Q  75 aaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcag-gga-acagtacgtcatccatt 172  Q
    ||||||||||||||| |||  ||||||||| |||| ||||||| || ||||| |||||||||||||||| ||| |||| ||| || |||| ||||| |||    
T  3299259 aaaataaaatttaatctttaaatactctccagatacgtatcggaaaatatcatgcaggtatcggtgcaggatatgcagaggatacggtacatcatctatt 3299160  T
Q  173 ttgaagtatcggggctt 189  Q
    |||||||||| ||||||    
T  3299159 ttgaagtatcagggctt 3299143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 6708018 - 6708157
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| ||  ||||||| ||||||| || ||||||||||| ||||  ||| || |||||||||| |||||||||||||  |||| ||    
T  6708018 gtatcggataattatttttttttaaaataatatttaatcttcggatactctcctgatacatattggaaagtatcaggaaggtatcggtgcatgatacaca 6708117  T
Q  152 ggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    |||   ||| || |||||||||||| ||||||||||||||    
T  6708118 ggggatacaatatgtcatccattttaaagtatcggggctt 6708157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 182
Target Start/End: Complemental strand, 32018097 - 32017986
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagggaacag--tacgtcatcca 170  Q
    ||||||||||||||||||||   ||||||| | |||| |||| || ||||||| ||||| ||||||||||| |||||||||| | |   |||||||||||    
T  32018097 aaaaaataaaatttaatattcatatactctacggatacgtataggaaagtatcgggcagatatcggtgcaggatacgcaggggatacgatacgtcatcca 32017998  T
Q  171 ttttgaagtatc 182  Q
    ||||||||||||    
T  32017997 ttttgaagtatc 32017986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 10894619 - 10894688
Alignment:
Q  121 gtatcaggcaggtatcggtgcagaatacgcaggga-acagtacgtcatccattttgaagtatcggggctt 189  Q
    ||||||||||||||||||||||  |||||| |||| || |||||||||||||||||||||||| ||||||    
T  10894619 gtatcaggcaggtatcggtgcatgatacgcggggatacggtacgtcatccattttgaagtatcagggctt 10894688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 154
Target Start/End: Complemental strand, 19128294 - 19128192
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| |||||   ||||||||||||||||| || ||||||||| | |||| ||||||| ||||||| ||| ||||| ||||||| |||| ||    
T  19128294 gtatcggataattatttttaaaaaaaataaaatttaatcttcggatactcttctgatacgtatcggaaagtatcgggcgggtattggtgcaggatacaca 19128195  T
Q  152 ggg 154  Q
    |||    
T  19128194 ggg 19128192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 185
Target Start/End: Original strand, 13061325 - 13061417
Alignment:
Q  95 gatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagggaaca--gtacgtcatccattttgaagtatcggg 185  Q
    ||||||||||  ||| ||||| | ||||||||||||| ||||| ||||| |||||||| ||| |  ||||||||| |||||||||||||||||    
T  13061325 gatactctcctaatacgtatcagaaagtatcaggcagatatcgatgcaggatacgcagagaatatggtacgtcattcattttgaagtatcggg 13061417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 118
Target Start/End: Original strand, 31741097 - 31741209
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgc----------gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctc 103  Q
    |||||||||| ||||||||||| ||| |||||||||||          |||||||||||| || ||||||||||||||||||| ||||||  | ||||||    
T  31741097 agaaatcaaattaatataaaaaacacgagtattcgtgcgtatcggaaagtatcggaaaattatcttcttaaaaaataaaatttgatattt--agactctc 31741194  T
Q  104 ccgatatgtatcggg 118  Q
    |||||| ||||||||    
T  31741195 ccgatacgtatcggg 31741209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 8357157 - 8357114
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcg 57  Q
    |||||||||||||||||||| | |||||||||||||||||||||    
T  8357157 agaaatcaaaataatataaagaacacaagtattcgtgcgtatcg 8357114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 151
Target Start/End: Original strand, 22989332 - 22989410
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||||||||||||  |  |||||| |||||||| |||| || |||||||||| || |||| ||||||||||||||    
T  22989332 aaaaaataaaatttaatcatctgatactatcccgatacgtataggaaagtatcaggtagatatctgtgcagaatacgca 22989410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 151
Target Start/End: Complemental strand, 23799065 - 23798987
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||||||||||||  |  |||||| |||||||| |||| || |||||||||| || |||| ||||||||||||||    
T  23799065 aaaaaataaaatttaatcatctgatactatcccgatacgtataggaaagtatcaggtagatatctgtgcagaatacgca 23798987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 182
Target Start/End: Original strand, 13607795 - 13607894
Alignment:
Q  85 ttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcag-gga-acagtacgtcatccattttgaagtatc 182  Q
    ||||| || ||||||||||| |||| ||||| | || ||| ||||||||||| |||||| ||| |||| ||| ||  |||||||||||||||||||||||    
T  13607795 ttaatcttcggatactctcctgatacgtatcagaaattattaggcaggtatcagtgcaggatatgcagaggatacgatacgtcatccattttgaagtatc 13607894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 29893047 - 29892968
Alignment:
Q  112 tatcgggaagtatcaggcaggtatcggtgcagaatacgcagggaa--cagtacgtcatccattttgaagtatcggggctt 189  Q
    ||||||||| |||| | ||| ||||| ||||| |||||||||| |  |||||| ||||||||||| ||||||| ||||||    
T  29893047 tatcgggaaatatcggacagatatcgatgcaggatacgcaggggatacagtacatcatccattttaaagtatctgggctt 29892968  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 31079673 - 31079614
Alignment:
Q  132 gtatcggtgcagaatacgcagggaa--cagtacgtcatccattttgaagtatcggggctt 189  Q
    |||||||||||| |||||||||| |  || ||||||||||||||| ||||||||| ||||    
T  31079673 gtatcggtgcaggatacgcaggggatacaatacgtcatccattttaaagtatcggagctt 31079614  T

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Target: scaffold0060 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 30421 - 30560
Alignment:
Q  52 gtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgca 151  Q
    |||||||| ||| ||||| ||  |||||||||||||||||||||||||||||| |||| ||||| ||||||||| |||||||||||||| || |||||||    
T  30421 gtatcggataattatttttttttaaaataaaatttaatatttggatactctccggatacgtatcaggaagtatcgggcaggtatcggtgtaggatacgca 30520  T
Q  152 ggga--acagtacgtcatccattttgaagtatcggggctt 189  Q
    || |  || |||||| ||||||||||||||||||||||||    
T  30521 ggaaatacggtacgttatccattttgaagtatcggggctt 30560  T

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Target: scaffold0112 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 189
Target Start/End: Original strand, 42006 - 42181
Alignment:
Q  15 gaaatcaaaataatataaaaagcacaagtattcgtgcgtatcggaa----------aatgattttcttaaaaaataaaatttaatatttggatactctcc 104  Q
    ||||||||||||||||||||| ||||||||| ||||||||| ||||          ||| ||||| |||||||||||||||||||||||||||||||||     
T  42006 gaaatcaaaataatataaaaaacacaagtatccgtgcgtatgggaacgtatcggataattatttttttaaaaaataaaatttaatatttggatactctct 42105  T
Q  105 cgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
     |||| ||||||||||           |||||||||||| ||||||||||   ||||||||||||||||||||||||||||||||||    
T  42106 agatacgtatcgggaa-----------gtatcggtgcaggatacgcaggggatacagtacgtcatccattttgaagtatcggggctt 42181  T

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Target: scaffold0285 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 13370 - 13252
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagg-ga-acagtacgtcatcca 170  Q
    ||||||||||||||||| ||  |||||||||  |||| ||||||||||||||| | ||||||||||||||| ||||||||| || ||  |||||||||||    
T  13370 aaaaaataaaatttaatcttcagatactctcttgatacgtatcgggaagtatctgacaggtatcggtgcaggatacgcaggagatacgatacgtcatcca 13271  T
Q  171 ttttgaagtatcggggctt 189  Q
    |||||||||||||| ||||    
T  13270 ttttgaagtatcggagctt 13252  T

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Target: scaffold0177 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 51 - 189
Target Start/End: Original strand, 25517 - 25646
Alignment:
Q  51 cgtatcggaaaatgattttcttaaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgc 150  Q
    |||||| || ||| ||||| | |||||||||||||||||||||||||||||||| |||| ||||||||||           |||||||||||||||||||    
T  25517 cgtatcagataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaa-----------gtatcggtgcagaatacgc 25605  T
Q  151 aggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    ||||   || || ||||||||||||||||||||||||||||    
T  25606 aggggatacggtgcgtcatccattttgaagtatcggggctt 25646  T

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Target: scaffold0037 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 14 - 189
Target Start/End: Original strand, 27720 - 27897
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatc----------ggaaaatgattttcttaaaaaataaaatttaatatttggatactctc 103  Q
    |||||||||||||||||||||| || |||||| ||||||||||          ||| ||| ||||| | ||||||||||||||||||||||||||||||     
T  27720 agaaatcaaaataatataaaaaacataagtatccgtgcgtatcaggacatatcggataattattttttaaaaaaataaaatttaatatttggatactctg 27819  T
Q  104 ccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcaggg--aacagtacgtcatccattttgaagtatcggggctt 189  Q
    | |||| ||||||          | ||||||||||||||| ||| ||||||   || |||||||||||||||||||||||||||||||    
T  27820 cggatacgtatcg----------gacaggtatcggtgcaggatatgcaggggatacggtacgtcatccattttgaagtatcggggctt 27897  T

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Target: scaffold0406 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 14041 - 13931
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcggaaaat----gat--tttcttaaaaaataaaatttaatatttggatactctcccga 107  Q
    ||||||||||||||||||| ||  |||||||| ||||||||||||||| |    |||  ||  |||||||| ||||||||||||||||||||||||| ||    
T  14041 agaaatcaaaataatataataaagacaagtatacgtgcgtatcggaaagtatctgataattatttaaaaaaaaaaatttaatatttggatactctccgga 13942  T
Q  108 tatgtatcggg 118  Q
    || ||||||||    
T  13941 tacgtatcggg 13931  T

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Target: scaffold0406; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 185
Target Start/End: Complemental strand, 13901 - 13872
Alignment:
Q  156 acagtacgtcatccattttgaagtatcggg 185  Q
    ||||||||||||||||||||||||||||||    
T  13901 acagtacgtcatccattttgaagtatcggg 13872  T

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Target: scaffold0240 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 10720 - 10602
Alignment:
Q  73 aaaaaataaaatttaatatttggatactctcccgatatgtatcgggaagtatcaggcaggtatcggtgcagaatacgcagggaaca--gtacgtcatcca 170  Q
    ||||| ||| ||||||| ||  |||||||||| |||| |||||| |||||||| |||| |||||||||||  |||||||||| | |  |||| |||||||    
T  10720 aaaaagtaacatttaatcttctgatactctcctgatacgtatcgagaagtatcgggcaagtatcggtgcatgatacgcaggggatatggtacatcatcca 10621  T
Q  171 ttttgaagtatcggggctt 189  Q
    |||| ||||||| ||||||    
T  10620 ttttaaagtatctgggctt 10602  T

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Target: scaffold0005 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 44647 - 44706
Alignment:
Q  132 gtatcggtgcagaatacgcagggaaca--gtacgtcatccattttgaagtatcggggctt 189  Q
    |||||||||||| |||||||||| | |  |||||||||||||||||||||||||||||||    
T  44647 gtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcggggctt 44706  T

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Target: scaffold0005; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 44540 - 44653
Alignment:
Q  14 agaaatcaaaataatataaaaagcacaagtattcgtgcgtatcggaa----------aatgattttcttaaaaaataaaatttaatatttggatactctc 103  Q
    |||||||||||||||||||||| ||||||||| |||| ||||||| |          ||| ||||| | ||| || ||||||||||||||||||||||||    
T  44540 agaaatcaaaataatataaaaaacacaagtatccgtgtgtatcgggatgtatcggataattattttttaaaagaaaaaaatttaatatttggatactctc 44639  T
Q  104 ccgatatgtatcgg 117  Q
    | |||| |||||||    
T  44640 cggatacgtatcgg 44653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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