View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11855_low_8 (Length: 545)
Name: NF11855_low_8
Description: NF11855
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11855_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 483; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 483; E-Value: 0
Query Start/End: Original strand, 18 - 533
Target Start/End: Complemental strand, 25334539 - 25334024
Alignment:
| Q |
18 |
aaagcatgaacaaaatcaccaattaatcattaacgaatagaaaccaccatgtaatcatgcatcaccatcaaactcattgctacaatcaagcatcatgaat |
117 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25334539 |
aaagcatgaacaaaatcaccaattaatcattaacgaatagaaaccaccatgtaatcatgcatcaccatcaaactcattgctacaatcaagcatcatgaat |
25334440 |
T |
|
| Q |
118 |
aaagaaattcaccacttgcattttgaggaaatttttagttagttgttgcatgaaaattgggtttgacctaataccaccacatcaattttccaattttagg |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25334439 |
aaagaaattcaccacttgcattttgaggaaatttttagttagttgttgcatgaaaattgggtttgacctaataccaccacatcaattttccaattttagg |
25334340 |
T |
|
| Q |
218 |
taacacaattttcatccatctaactttaattgcatccaatcttattgaaatatatatacctcatcattcttgcttgaataaaccaacttctatggtagaa |
317 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
25334339 |
taacacaattttcatccatctaactttaattgcatccaatcttattgaaatatatatacctcattattcttgcttgaataaaccaacttctatggtagaa |
25334240 |
T |
|
| Q |
318 |
gaaaattagcttcatattgtgacaattaatttgttcagataatataattgtaaaatctagaacacaaatcagccgtgacagtgactcgattatttggatt |
417 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |
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| T |
25334239 |
gaaaattagcttcatattgtgacaattaatttgttcagataatataattgtaaaatctagaacacaaatcagcagtgacagtgactcgattaattggatt |
25334140 |
T |
|
| Q |
418 |
tgttgaggtaattaattaagaggtttatgcaaaggnnnnnnngtgttcattacgcatagattaaaccagataaaattctaaacgagtattggagatcttt |
517 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25334139 |
tgttgaggtaattaattaagaggtttatgcaaaggaaaaaaagtgttcattacgcatagattaaaccagataaaattctaaacgagtattggagatcttt |
25334040 |
T |
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| Q |
518 |
attttgtatccgatct |
533 |
Q |
| |
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|||||||||||||||| |
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| T |
25334039 |
attttgtatccgatct |
25334024 |
T |
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