View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11856_high_61 (Length: 284)
Name: NF11856_high_61
Description: NF11856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11856_high_61 |
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Alignment Details
Target: chr1 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 14 - 269
Target Start/End: Original strand, 16066718 - 16066974
Alignment:
| Q |
14 |
agagcgttgaaagtgtcgcgactcgtgcattggacgagttggaaagtacaagttatttgtagtataggtcatacatttgcaatcaaaacactgaactttc |
113 |
Q |
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| T |
16066718 |
agagcgttgaaagtgtcgcgactcgtgcattggacgagttggaaagtacaagttatttgtagtataggtcatacatttgcaatcaaaacactgaactttc |
16066817 |
T |
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| Q |
114 |
aagttttcagtgttcaattgttcatgtttaatgaagctctcacaaataaaattgattaaattattcaaat-nnnnnnntatataggtagtggcccattca |
212 |
Q |
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| T |
16066818 |
aagttttcagtgttcaattgttcatgtttaatgaagctctcacaaataaaattgattaaattattcaaataaaaaaaatatataggtagtggcccattca |
16066917 |
T |
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| Q |
213 |
aatatctactaattgtagcatttaggttatgtttggatgataaaacaaagttaaagg |
269 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
16066918 |
aatatctactaattgtagcatttaggttatgtttggatgataaaagaaagttaaagg |
16066974 |
T |
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