View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11856_high_69 (Length: 254)
Name: NF11856_high_69
Description: NF11856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11856_high_69 |
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Alignment Details
Target: chr5 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 33161114 - 33160874
Alignment:
| Q |
1 |
aaaaagttgttaatacacaaatcaataaaactattaaagtttgctaattttcataaacaatttcacatttgtcgtactgccttgtgtatgaatagttttg |
100 |
Q |
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| T |
33161114 |
aaaaagttgttcatacacaaatcaataaaactattaaatttggctaattttcataaacaatttcacatttttcgtactgccttgtgtatgaatagttttg |
33161015 |
T |
|
| Q |
101 |
gtaaaacaaacaacgtataattacaactaccattctacgtaccagtaaaaaccaaaacataattcacacaaccaaaaagatatgttgtagctcacactaa |
200 |
Q |
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||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
33161014 |
gtaaaacaaccaacgtataattacaactaccattctacataccagtaaaaaccaaaacataattcacacaaccaaaaagatatgttgtagctcacactca |
33160915 |
T |
|
| Q |
201 |
aacaacgatttaggatccttttcacttacaattctcttcat |
241 |
Q |
| |
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|||||||| |||||| ||||||||||||||||||||||||| |
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| T |
33160914 |
aacaacgagttaggacccttttcacttacaattctcttcat |
33160874 |
T |
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