View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11856_high_72 (Length: 247)
Name: NF11856_high_72
Description: NF11856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11856_high_72 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 15 - 247
Target Start/End: Original strand, 32942511 - 32942743
Alignment:
| Q |
15 |
gacatcacgtaattgaggaattttgttgagttaattaatttcaaactactttttctgttttgacaaaatctaataatctattgcgccgcattctctcaaa |
114 |
Q |
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| T |
32942511 |
gacatcacgtacttgaggaattttgtagagttaattaatttcaaactactttttctgttttgacaaaatctaataatctattgcgccgcattctctcaaa |
32942610 |
T |
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| Q |
115 |
ctacagtgtcattaacttaattatgcatgtatgaatcatatgcacagtcttgtgaagaaattaattaaggcacatgcattatacaagttcaaaagaggga |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32942611 |
ctacagtgtcattaacttaattatgcatgtatgaatcatatgcacagtcttgtgaagaaattaattaaggcacatgcattatacaagttcaaaagaggga |
32942710 |
T |
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| Q |
215 |
tcaaaactttgaattcatgaattcataatgaat |
247 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
32942711 |
tcaaaactttgaattcatgaattcataatgaat |
32942743 |
T |
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