View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11856_low_2 (Length: 885)

Name: NF11856_low_2
Description: NF11856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11856_low_2
NF11856_low_2
[»] chr5 (29 HSPs)
chr5 (56-870)||(30265781-30266596)
chr5 (721-870)||(42544601-42544751)
chr5 (720-862)||(27886414-27886557)
chr5 (721-870)||(12681059-12681204)
chr5 (725-870)||(333267-333413)
chr5 (721-870)||(12166154-12166302)
chr5 (721-862)||(667612-667754)
chr5 (721-862)||(30001954-30002096)
chr5 (721-844)||(11917348-11917472)
chr5 (721-844)||(15068403-15068527)
chr5 (723-866)||(17085231-17085375)
chr5 (721-870)||(38433640-38433795)
chr5 (716-844)||(8408928-8409057)
chr5 (725-870)||(2226869-2227020)
chr5 (725-870)||(9160927-9161081)
chr5 (749-844)||(36177121-36177217)
chr5 (721-844)||(701162-701287)
chr5 (788-867)||(10174096-10174175)
chr5 (719-844)||(9988876-9988997)
chr5 (724-844)||(36103627-36103749)
chr5 (724-792)||(23780770-23780839)
chr5 (724-792)||(23867723-23867792)
chr5 (721-824)||(27572081-27572185)
chr5 (721-866)||(36567664-36567810)
chr5 (721-824)||(25495027-25495131)
chr5 (788-844)||(35358947-35359003)
chr5 (721-800)||(10090248-10090328)
chr5 (837-870)||(20191964-20191997)
chr5 (810-870)||(32521207-32521272)
[»] chr8 (31 HSPs)
chr8 (721-870)||(10661096-10661246)
chr8 (721-870)||(36910322-36910471)
chr8 (724-870)||(44672734-44672881)
chr8 (714-844)||(14549159-14549290)
chr8 (721-840)||(33068208-33068328)
chr8 (725-844)||(3006588-3006708)
chr8 (721-844)||(5803262-5803386)
chr8 (721-870)||(18170010-18170160)
chr8 (721-870)||(18633577-18633728)
chr8 (721-870)||(3681876-3682020)
chr8 (725-844)||(6200868-6200989)
chr8 (723-811)||(30392083-30392172)
chr8 (721-824)||(44336714-44336819)
chr8 (724-824)||(24682126-24682227)
chr8 (721-813)||(31497656-31497749)
chr8 (721-824)||(11218892-11218996)
chr8 (720-820)||(15272346-15272447)
chr8 (720-820)||(15452715-15452816)
chr8 (724-824)||(22811209-22811310)
chr8 (719-824)||(40436376-40436483)
chr8 (721-805)||(12883785-12883870)
chr8 (721-814)||(8035985-8036079)
chr8 (722-824)||(33565898-33566003)
chr8 (833-870)||(14549289-14549326)
chr8 (721-853)||(28073198-28073331)
chr8 (751-866)||(38926420-38926526)
chr8 (721-824)||(4785178-4785282)
chr8 (721-808)||(9012884-9012972)
chr8 (719-813)||(30254178-30254273)
chr8 (724-757)||(11864023-11864056)
chr8 (724-757)||(37162743-37162776)
[»] chr2 (25 HSPs)
chr2 (721-870)||(44979759-44979909)
chr2 (721-862)||(9811333-9811475)
chr2 (724-870)||(25298241-25298388)
chr2 (744-870)||(11375867-11375994)
chr2 (721-844)||(36413656-36413780)
chr2 (721-844)||(19937141-19937264)
chr2 (721-863)||(42785621-42785769)
chr2 (721-870)||(17916846-17916991)
chr2 (721-862)||(18356846-18356988)
chr2 (724-844)||(44035251-44035373)
chr2 (721-844)||(16578578-16578702)
chr2 (721-824)||(17762684-17762788)
chr2 (719-824)||(27301520-27301626)
chr2 (721-853)||(15320586-15320719)
chr2 (722-869)||(34910254-34910404)
chr2 (721-824)||(5862667-5862771)
chr2 (721-824)||(41461024-41461128)
chr2 (721-851)||(12041598-12041729)
chr2 (723-824)||(28790450-28790552)
chr2 (721-853)||(1330952-1331085)
chr2 (721-769)||(6946634-6946682)
chr2 (781-824)||(30759684-30759727)
chr2 (721-866)||(44085431-44085578)
chr2 (774-824)||(4657728-4657778)
chr2 (785-858)||(32855239-32855312)
[»] chr7 (43 HSPs)
chr7 (721-870)||(27054722-27054872)
chr7 (721-871)||(13852251-13852407)
chr7 (717-863)||(7209266-7209413)
chr7 (721-862)||(11206356-11206498)
chr7 (721-866)||(31982990-31983135)
chr7 (732-867)||(47903201-47903337)
chr7 (724-870)||(32823550-32823696)
chr7 (727-844)||(10069142-10069260)
chr7 (721-844)||(10671763-10671887)
chr7 (721-844)||(47069611-47069735)
chr7 (721-844)||(47204473-47204597)
chr7 (724-862)||(31876633-31876766)
chr7 (719-844)||(12117540-12117666)
chr7 (721-866)||(18673184-18673330)
chr7 (721-844)||(3213238-3213362)
chr7 (720-841)||(5932637-5932759)
chr7 (721-841)||(8768982-8769103)
chr7 (724-844)||(1335264-1335384)
chr7 (721-870)||(2408951-2409106)
chr7 (732-870)||(24361484-24361622)
chr7 (724-866)||(36507892-36508035)
chr7 (721-824)||(32942115-32942219)
chr7 (749-844)||(43429146-43429242)
chr7 (721-792)||(45898128-45898200)
chr7 (717-822)||(7205916-7206022)
chr7 (723-868)||(7760049-7760195)
chr7 (728-862)||(11216104-11216239)
chr7 (726-824)||(8568590-8568689)
chr7 (719-844)||(48675052-48675178)
chr7 (791-870)||(24361278-24361357)
chr7 (734-824)||(26215160-26215251)
chr7 (721-824)||(29628050-29628154)
chr7 (719-757)||(10338914-10338952)
chr7 (721-808)||(30079639-30079732)
chr7 (724-769)||(40848796-40848841)
chr7 (822-870)||(22366500-22366548)
chr7 (721-824)||(34750930-34751034)
chr7 (738-824)||(8118316-8118403)
chr7 (721-845)||(524881-525006)
chr7 (719-815)||(4153772-4153869)
chr7 (721-758)||(8081017-8081054)
chr7 (760-824)||(23729369-23729434)
chr7 (722-813)||(37375261-37375354)
[»] chr6 (25 HSPs)
chr6 (721-870)||(35040205-35040350)
chr6 (721-870)||(10590793-10590943)
chr6 (721-862)||(12270499-12270641)
chr6 (721-870)||(15859668-15859826)
chr6 (721-844)||(10494397-10494521)
chr6 (721-844)||(13810885-13811009)
chr6 (725-866)||(5287898-5288040)
chr6 (721-844)||(5874168-5874292)
chr6 (721-870)||(10391011-10391162)
chr6 (721-844)||(25136714-25136838)
chr6 (736-844)||(33550277-33550386)
chr6 (721-806)||(20500507-20500593)
chr6 (722-865)||(24644948-24645091)
chr6 (776-844)||(13801998-13802066)
chr6 (721-824)||(22413780-22413884)
chr6 (721-859)||(9686000-9686139)
chr6 (721-861)||(6266846-6266987)
chr6 (725-824)||(892377-892477)
chr6 (721-784)||(8135378-8135442)
chr6 (746-823)||(30752498-30752576)
chr6 (721-773)||(29048069-29048121)
chr6 (724-803)||(31945481-31945561)
chr6 (772-853)||(14940579-14940660)
chr6 (725-805)||(26645439-26645520)
chr6 (725-805)||(26751405-26751486)
[»] chr1 (35 HSPs)
chr1 (721-870)||(51252405-51252555)
chr1 (724-870)||(1161732-1161879)
chr1 (721-870)||(16529480-16529640)
chr1 (722-844)||(32953982-32954104)
chr1 (721-844)||(8211221-8211345)
chr1 (721-870)||(33474390-33474540)
chr1 (720-844)||(5155359-5155484)
chr1 (732-867)||(29388986-29389127)
chr1 (720-844)||(39256652-39256777)
chr1 (721-844)||(20493691-20493815)
chr1 (721-866)||(42789602-42789743)
chr1 (721-870)||(45691739-45691895)
chr1 (721-844)||(33910797-33910922)
chr1 (721-824)||(36203479-36203583)
chr1 (726-844)||(11898958-11899072)
chr1 (734-870)||(44918503-44918640)
chr1 (724-824)||(27507527-27507628)
chr1 (721-824)||(12973502-12973606)
chr1 (725-866)||(34914080-34914222)
chr1 (721-853)||(35980399-35980527)
chr1 (721-824)||(40095457-40095561)
chr1 (721-813)||(6248019-6248112)
chr1 (724-824)||(32910405-32910506)
chr1 (722-823)||(8268600-8268703)
chr1 (726-820)||(9962187-9962282)
chr1 (723-824)||(3935401-3935503)
chr1 (721-824)||(21685578-21685682)
chr1 (721-801)||(25560055-25560136)
chr1 (721-824)||(26345094-26345198)
chr1 (724-770)||(17988993-17989039)
chr1 (732-805)||(24629901-24629975)
chr1 (725-866)||(52828769-52828910)
chr1 (833-870)||(24911039-24911076)
chr1 (833-870)||(32954108-32954145)
chr1 (760-824)||(35980304-35980369)
[»] chr3 (30 HSPs)
chr3 (721-870)||(6004377-6004527)
chr3 (723-870)||(21586833-21586981)
chr3 (721-870)||(32880243-32880393)
chr3 (721-862)||(34794537-34794679)
chr3 (721-862)||(51149655-51149797)
chr3 (721-844)||(43030359-43030483)
chr3 (721-862)||(9827776-9827918)
chr3 (721-870)||(50562560-50562710)
chr3 (721-844)||(35402221-35402345)
chr3 (721-844)||(4669663-4669787)
chr3 (721-844)||(10369154-10369278)
chr3 (777-870)||(48032839-48032931)
chr3 (721-813)||(2832446-2832539)
chr3 (721-866)||(38651983-38652128)
chr3 (724-839)||(39097891-39098010)
chr3 (721-824)||(55467678-55467782)
chr3 (721-803)||(35532193-35532276)
chr3 (725-824)||(17144766-17144865)
chr3 (729-824)||(45629143-45629239)
chr3 (722-824)||(10481681-10481784)
chr3 (719-824)||(42363261-42363367)
chr3 (721-824)||(26291992-26292096)
chr3 (796-844)||(33360972-33361020)
chr3 (721-800)||(37044863-37044943)
chr3 (725-824)||(54121967-54122067)
chr3 (727-824)||(20846418-20846518)
chr3 (833-870)||(43030487-43030524)
chr3 (737-824)||(8557994-8558082)
chr3 (721-752)||(33360953-33360984)
chr3 (727-800)||(22257559-22257633)
[»] chr4 (35 HSPs)
chr4 (721-870)||(40900068-40900223)
chr4 (721-870)||(43630520-43630670)
chr4 (721-870)||(40806803-40806958)
chr4 (724-870)||(52344683-52344825)
chr4 (721-867)||(30193968-30194116)
chr4 (721-870)||(23937508-23937658)
chr4 (721-862)||(36077515-36077657)
chr4 (721-844)||(50570974-50571098)
chr4 (724-866)||(5261958-5262101)
chr4 (721-870)||(48996027-48996177)
chr4 (721-870)||(6333259-6333414)
chr4 (721-844)||(29636716-29636840)
chr4 (721-844)||(29644141-29644265)
chr4 (721-870)||(32136635-32136790)
chr4 (716-840)||(42557662-42557787)
chr4 (721-869)||(10218621-10218780)
chr4 (714-836)||(13690872-13690995)
chr4 (723-844)||(51394663-51394780)
chr4 (722-871)||(48293394-48293544)
chr4 (721-805)||(31301238-31301323)
chr4 (800-870)||(8176587-8176657)
chr4 (721-844)||(23120273-23120397)
chr4 (721-824)||(36106455-36106560)
chr4 (720-866)||(45983325-45983472)
chr4 (726-859)||(23449985-23450119)
chr4 (721-801)||(32223378-32223459)
chr4 (721-824)||(5122420-5122524)
chr4 (722-864)||(48338285-48338432)
chr4 (725-803)||(41260219-41260298)
chr4 (721-824)||(20986364-20986468)
chr4 (724-824)||(8484611-8484712)
chr4 (721-814)||(10778519-10778613)
chr4 (732-805)||(11031690-11031764)
chr4 (791-844)||(4688690-4688743)
chr4 (724-824)||(18536680-18536781)
[»] scaffold0059 (1 HSPs)
scaffold0059 (721-844)||(69556-69680)
[»] scaffold0308 (1 HSPs)
scaffold0308 (721-862)||(5881-6023)
[»] scaffold0013 (2 HSPs)
scaffold0013 (721-844)||(105972-106096)
scaffold0013 (721-844)||(128579-128703)
[»] scaffold0029 (1 HSPs)
scaffold0029 (721-844)||(40591-40725)
[»] scaffold0204 (2 HSPs)
scaffold0204 (722-864)||(25807-25954)
scaffold0204 (721-805)||(14465-14550)
[»] scaffold0688 (2 HSPs)
scaffold0688 (739-824)||(1119-1204)
scaffold0688 (739-824)||(7688-7773)


Alignment Details
Target: chr5 (Bit Score: 619; Significance: 0; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 619; E-Value: 0
Query Start/End: Original strand, 56 - 870
Target Start/End: Complemental strand, 30266596 - 30265781
Alignment:
Q  56 tgtattattaatacaaaaaagaggtaactgttttgagagaaaaggtatagaaactgtgtgcatgtgaaggtggatgaacgtgaacgtggttactcactca 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||    
T  30266596 tgtattattaatacaaaaaagaggtaactgttttgagagaaaaggtatagaaactgtgtgcatgtgaaggtggatgaacgtgaacgtggt----cactca 30266501  T
Q  156 ctcactatgcaactttttcacgcggtttagtaaaatttgaacaatggtggtgatatatggtaggaaaaa-gattt-gtttttcaaataccaaaaatccgg 253  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  30266500 ctcaccatgcaactttttcacgcggtttagtaaaatttgaacaatggtggtgatatatggtaggaaaaaagattttgtttttcaaat-ccaaaaatccgg 30266402  T
Q  254 tgtaagtgatatgattaagggtagaagaacaagatccgatccaaaccaattaaataggttcgattttgttaacgtattctacgccataccattatatttt 353  Q
    ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30266401 tgtgagtgatatgattaagggtagaagaacaagatcccatccaaaccaattaaataggttcgattttgttaacgtattctacgccataccattatatttt 30266302  T
Q  354 gatttggatatcgattttatcgtcatgttttatggaggttgtgtagctcaatg-nnnnnnnnnnaaggaaagagaaaatttatttttgaaaaggtcaaga 452  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||           ||||||||||||| ||||||||||||||||||||||    
T  30266301 gatttggatatcgattttatcgtcgtgttttatggatgttgtgtagctcaatgtttttttttttaaggaaagagaaattttatttttgaaaaggtcaaga 30266202  T
Q  453 aagaatgtattaaaatggcatagtcataacacaagaagtgttaatattgaaaatacaatagtaaagattacaaatgagccaacaaagcaaagtcaccaaa 552  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  30266201 aagaatgtattaaaatggcatagtcataacacaagaagtgttaatattgaaaatacaatagtaaagattacaaaagaggcaacaaagcaaagtcaccaaa 30266102  T
Q  553 ccaaaagaaaacaataatcaactagttgaaaggaaacatgttagaggttgaannnnnnnnaacgtttaacttaatttgtgaccatactaatatatagttt 652  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||    
T  30266101 ccaaaagaaaacaataatcaactagatgaaaggaaacatgttagaggttgaattttttttaacgtttaacttaatttgtgaccatactaatatatagttt 30266002  T
Q  653 aaccgtttcaaaagatgatccggataaacaattcttattgctaaacccaatttagtttgagttaaga--ataggggtgttcgcggtgcggtttggtttgg 750  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||  | |||||||||||||||||||||||||||||    
T  30266001 aaccgtttcaaaagatgatccggataaacaattcttatcgctaaacccaatctagtttgagttaagattacaggggtgttcgcggtgcggtttggtttgg 30265902  T
Q  751 ttttgagcataaaagtcatc-caaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaaaagtcatcaaaaccaaaccaatgcgg 849  Q
    |||||||||||||| |||||  |||||| |||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  30265901 ttttgagcataaaaatcatctaaaccgcaagataaaaaaacatgcagtttggtttggttcggttgatttttaaaaagtcatcaaaaccaaaccaatgcgg 30265802  T
Q  850 tttgaattggttcggtttgtg 870  Q
     ||||||| ||||||||||||    
T  30265801 cttgaattagttcggtttgtg 30265781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 721 - 870
Target Start/End: Original strand, 42544601 - 42544751
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||| ||||||||||| |||||| || ||||||||||| |||||||||| || ||||||||||||||||||||| |||||||||| || ||||||||||    
T  42544601 tagggttgttcgcggtgtggtttgcttcggttttgagcaaaaaagtcatctaaaccgcgagataaaaaagcatgcggtttggtttggttcggttgatttt 42544700  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    ||| |||||||| ||||||||||||||||||||| ||||||||||||||||    
T  42544701 taagaagtcatccaaaccaaaccaatgcggtttggattggttcggtttgtg 42544751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 720 - 862
Target Start/End: Complemental strand, 27886557 - 27886414
Alignment:
Q  720 ataggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgattt 818  Q
    |||||||||||||||||||||||||||| |||||  ||||||| | |||||||| |||||||| |||||||||||| |||||||||| || |||||||||    
T  27886557 ataggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgattt 27886458  T
Q  819 ttaaaaagtcatcaaaaccaaaccaatgcggtttgaattggttc 862  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||    
T  27886457 ttaaaaagtcatccaaaccaaaccaatgcggtttggattggttc 27886414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 721 - 870
Target Start/End: Complemental strand, 12681204 - 12681059
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcca-accgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||| || |||||||||||||||||||||     ||||||| || ||||||||||    
T  12681204 taggggtgttcgcggtgcggtttagttcggttttgagcataaaagtcattcagaccgcgagataaaaaagcatg-----tggtttggttcggttgatttt 12681110  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    |||||| ||||| ||||||||||||||||||||| ||||||| ||||||||    
T  12681109 taaaaattcatccaaaccaaaccaatgcggtttggattggttaggtttgtg 12681059  T

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Target: chr5; HSP #5
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 725 - 870
Target Start/End: Complemental strand, 333413 - 333267
Alignment:
Q  725 ggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaa 823  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||| |||||||||| ||||||||||   |||||||| || | ||||||||||||    
T  333413 ggtgtttgcggtgcggtttggttcgattttgagcataaaagtcatccaaaccgcgagatagaaaagcatgcgaattggtttggttcgattgatttttaaa 333314  T
Q  824 aagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    |||||||| ||||||||||||||| | ||||||||||| ||||||||    
T  333313 aagtcatccaaaccaaaccaatgcagcttgaattggtttggtttgtg 333267  T

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Target: chr5; HSP #6
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 721 - 870
Target Start/End: Complemental strand, 12166302 - 12166154
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaac-cgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||||| ||| ||||| |||| ||||| |||||||||||||||| ||  ||||||||||||||||||||||||||||||| || ||||||||||    
T  12166302 taggggtgttcgaggtacggtt-ggttcggttt-gagcataaaagtcatcaaaatcgcgagataaaaaagcatgcagtttggtttggttcggttgatttt 12166205  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    |||||||||||| ||||||||||||||||| ||| ||||||| ||||||||    
T  12166204 taaaaagtcatccaaaccaaaccaatgcggcttggattggtttggtttgtg 12166154  T

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Target: chr5; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 721 - 862
Target Start/End: Complemental strand, 667754 - 667612
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| |||||  ||||||| | |||||||| |||||||| | |||| ||| | |||||||||| || ||||||||||    
T  667754 taggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagagaaaaacatacggtttggtttggttcggttgatttt 667655  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttc 862  Q
    |||||||||||| ||||||||||||||||||||| ||||||||    
T  667654 taaaaagtcatccaaaccaaaccaatgcggtttggattggttc 667612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 721 - 862
Target Start/End: Original strand, 30001954 - 30002096
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||| ||||||||||||||||||||| |||||  ||||||| | | |||||| |||||||| |||||||||||| |||||||||| || ||||| ||||    
T  30001954 tagggttgttcgcggtgcggtttggttcggtttcaagcataataataatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgttttt 30002053  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttc 862  Q
    |||||||||||| ||||||||||||||||||||| ||||||||    
T  30002054 taaaaagtcatccaaaccaaaccaatgcggtttggattggttc 30002096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 721 - 844
Target Start/End: Original strand, 11917348 - 11917472
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| |||||  ||||||| | |||||||| |||||||| |||||||||||| |||||||||| || ||||||||||    
T  11917348 taggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 11917447  T
Q  820 taaaaagtcatcaaaaccaaaccaa 844  Q
    |||||||||||| ||||||||||||    
T  11917448 taaaaagtcatccaaaccaaaccaa 11917472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 721 - 844
Target Start/End: Original strand, 15068403 - 15068527
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| |||||| ||||||| | |||||||| |||||||| ||||||||||||  ||||||||| || ||||||||||    
T  15068403 taggggtgttcgcggtgcggtttggttcggttttaagcataataatcatccaaaccgcgagagaaaaaagcatgcgatttggtttggttcggttgatttt 15068502  T
Q  820 taaaaagtcatcaaaaccaaaccaa 844  Q
    |||||||||||| ||||||||||||    
T  15068503 taaaaagtcatccaaaccaaaccaa 15068527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 723 - 866
Target Start/End: Complemental strand, 17085375 - 17085231
Alignment:
Q  723 ggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgattttta 821  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||| || ||||||||||||||||||  ||| ||||| || ||||||||||||    
T  17085375 ggggtgtttgcggtgcggtttggttcagttttgagcataaaagtcatccaaaccacgagataaaaaagcatgcgatttagtttggttcggttgattttta 17085276  T
Q  822 aaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtt 866  Q
    ||||||||||  || |||||||||| || ||| ||| ||||||||    
T  17085275 aaaagtcatcccaatcaaaccaatgtggcttggattcgttcggtt 17085231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 721 - 870
Target Start/End: Original strand, 38433640 - 38433795
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||| |||||| |||| ||| ||||||||||||||||||||| ||| ||||||||||||||| ||||| |||| ||||| || ||||||||||    
T  38433640 taggggtgttcacggtgcagtttagttcggttttgagcataaaagtcattcaaaccgcgagataaaaaatcatgcggtttagtttggttcggttgatttt 38433739  T
Q  820 taaaaagtc-----atcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    |||||||||     | | ||||||||||||||||| ||| ||||||||||||||||    
T  38433740 taaaaagtcctccaaaccaaaccaaaccaatgcggcttggattggttcggtttgtg 38433795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 716 - 844
Target Start/End: Original strand, 8408928 - 8409057
Alignment:
Q  716 aagaataggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttg 814  Q
    |||| ||||||||||||||||||||||||||| |||||  ||||||| | |||||||| |||||||| ||||||| |||| |||||||||| || |||||    
T  8408928 aagactaggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagtatgcggtttggtttggttcggttg 8409027  T
Q  815 atttttaaaaagtcatcaaaaccaaaccaa 844  Q
    ||||||||||||||| | ||||||||||||    
T  8409028 atttttaaaaagtcacccaaaccaaaccaa 8409057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 725 - 870
Target Start/End: Complemental strand, 2227020 - 2226869
Alignment:
Q  725 ggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaa 823  Q
    ||||||||||| | ||||||||| ||||||||||||||||  ||||||| |||||||||||||||| | |  |||||||||| || ||||||||||||||    
T  2227020 ggtgttcgcggagtggtttggttcggttttgagcataaaaaacatccaaaccgcgagataaaaaagaacgtggtttggtttggttcggttgatttttaaa 2226921  T
Q  824 aagtcatcaaaaccaaacc-----aatgcggtttgaattggttcggtttgtg 870  Q
    || ||||| ||||||||||     ||||||||||| ||||||||||||||||    
T  2226920 aactcatccaaaccaaaccaatctaatgcggtttggattggttcggtttgtg 2226869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 725 - 870
Target Start/End: Original strand, 9160927 - 9161081
Alignment:
Q  725 ggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggtt-----gattt 818  Q
    ||||||||||||||||||||||| ||||||||| | ||||||||| ||| |||||||||||||| |||||| |||||||||| |||||||     |||||    
T  9160927 ggtgttcgcggtgcggtttggttcggttttgagaa-aaaagtcattcaaaccgcgagataaaaa-gcatgcggtttggtttggtttggttcggttgattt 9161024  T
Q  819 ttaaaaagtcat-----caaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    ||||||||||||     | ||||||||||||||||||||| ||||||||||||||||    
T  9161025 ttaaaaagtcatccaaaccaaaccaaaccaatgcggtttggattggttcggtttgtg 9161081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 749 - 844
Target Start/End: Complemental strand, 36177217 - 36177121
Alignment:
Q  749 ggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaaaagtcatcaaaaccaaaccaa 844  Q
    ||||| ||||||||||||||||||| |||||||||||||| |||||| |||||||||| || |||||||||||||||||||||| |||| |||||||    
T  36177217 ggtttggagcataaaagtcatccaaaccgcgagataaaaatgcatgcggtttggtttggttcggttgatttttaaaaagtcatccaaacaaaaccaa 36177121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 721 - 844
Target Start/End: Original strand, 701162 - 701287
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttga-ttt 818  Q
    |||||||||| |||||||||||||||| |||||  ||||||| | |||||| |||||||||| |||||| ||||  |||||||||| || |||||| |||    
T  701162 taggggtgtttgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaaacatgtggtttggtttggttcggttgatttt 701261  T
Q  819 ttaaaaagtcatcaaaaccaaaccaa 844  Q
    ||||||||||||| ||||||||||||    
T  701262 ttaaaaagtcatccaaaccaaaccaa 701287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 788 - 867
Target Start/End: Original strand, 10174096 - 10174175
Alignment:
Q  788 agcatgcagtttggtttgatttggttgatttttaaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggttt 867  Q
    ||||||| |||||||||  ||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||    
T  10174096 agcatgcggtttggtttcgtttggttgatttttaaaaagttatccaaaccaaaccaatgcggtttggattggttcggttt 10174175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 719 - 844
Target Start/End: Complemental strand, 9988997 - 9988876
Alignment:
Q  719 aataggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatt 817  Q
    ||||||||||||| | ||||||| || || |||||||| |||||||||||||||| || |||||||||||| ||||     |||||||||| ||||||||    
T  9988997 aataggggtgttcacagtgcggtatgattcggttttgaacataaaagtcatccaaaccacgagataaaaaaacatg-----tggtttgattcggttgatt 9988903  T
Q  818 tttaaaaagtcatcaaaaccaaaccaa 844  Q
    |||||||||||||| ||| ||||||||    
T  9988902 tttaaaaagtcatccaaatcaaaccaa 9988876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 724 - 844
Target Start/End: Complemental strand, 36103749 - 36103627
Alignment:
Q  724 gggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagat-aaaaaagcatgcagtttggtttgatttggttgattttta 821  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||||| ||  | ||||| ||||||  |||| |||||||||| ||  |||||||||||    
T  36103749 gggtgttcgcggtgcggtttggttcggttttgagcataaaatacatccaaagtgtgagataaaaaaaatatgcggtttggtttggttcagttgattttta 36103650  T
Q  822 aaaagtcatcaaaaccaaaccaa 844  Q
    |||||||||| ||||||||||||    
T  36103649 aaaagtcatccaaaccaaaccaa 36103627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 724 - 792
Target Start/End: Original strand, 23780770 - 23780839
Alignment:
Q  724 gggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcat 792  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||    
T  23780770 gggtgttcgcggtgcggtttggttcggttttaagcataaaagtcatccaaaccgcgagataaaaaagcat 23780839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 724 - 792
Target Start/End: Original strand, 23867723 - 23867792
Alignment:
Q  724 gggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcat 792  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||    
T  23867723 gggtgttcgcggtgcggtttggttcggttttaagcataaaagtcatccaaaccgcgagataaaaaagcat 23867792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 721 - 824
Target Start/End: Complemental strand, 27572185 - 27572081
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||| |||||||||||||||| |||||||||  |||||||||||| |||||| || ||||||||||||| |||||||||| || |||||  |||    
T  27572185 taggggtgtttgcggtgcggtttggttcggttttgaggttaaaagtcatccgaaccgcaaggtaaaaaagcatgcggtttggtttggttcggttgtcttt 27572086  T
Q  820 taaaa 824  Q
    |||||    
T  27572085 taaaa 27572081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 721 - 866
Target Start/End: Original strand, 36567664 - 36567810
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||||||||||| ||||| ||||||||||||  ||||||| |||| |||||  |||| || ||| |||| |||||||| | ||||||||| |||    
T  36567664 taggggtgttcgcggtgccgtttgatttggttttgaggttaaaagttatccgaaccgtaagatgaataagtatgcggtttggttcggtttggttgacttt 36567763  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtt 866  Q
    |||||    ||  ||||||||||||||||||||| ||||| ||||||    
T  36567764 taaaataaaattcaaaccaaaccaatgcggtttggattggatcggtt 36567810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 721 - 824
Target Start/End: Original strand, 25495027 - 25495131
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatc-caaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||||||  |||||||||||| |||||||||  |||||||||||  |||||| | ||||| ||| ||||||||||||||  || ||||||||||    
T  25495027 taggggtgttcgctatgcggtttggttcggttttgaggctaaaagtcatctaaaccgcaacataaataagtatgcagtttggtttttttcggttgatttt 25495126  T
Q  820 taaaa 824  Q
    |||||    
T  25495127 taaaa 25495131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 788 - 844
Target Start/End: Original strand, 35358947 - 35359003
Alignment:
Q  788 agcatgcagtttggtttgatttggttgatttttaaaaagtcatcaaaaccaaaccaa 844  Q
    ||||||| |||||||||| || ||||||| |||||||||||||| ||||||||||||    
T  35358947 agcatgcggtttggtttggttcggttgatatttaaaaagtcatccaaaccaaaccaa 35359003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 721 - 800
Target Start/End: Original strand, 10090248 - 10090328
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatc-caaccgcgagataaaaaagcatgcagtttg 800  Q
    |||||||||||  |||||||||||||| |||||||||  |||||||||||  |||||| ||||||| ||| |||| |||||    
T  10090248 taggggtgttcatggtgcggtttggttcggttttgaggctaaaagtcatcagaaccgcaagataaataagtatgcggtttg 10090328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 837 - 870
Target Start/End: Complemental strand, 20191997 - 20191964
Alignment:
Q  837 caaaccaatgcggtttgaattggttcggtttgtg 870  Q
    ||||||||||||||||||||||| ||||||||||    
T  20191997 caaaccaatgcggtttgaattggatcggtttgtg 20191964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 810 - 870
Target Start/End: Complemental strand, 32521272 - 32521207
Alignment:
Q  810 ggttgatttttaaaaagtcatcaaaaccaaac-----caatgcggtttgaattggttcggtttgtg 870  Q
    |||||||||||||||| ||||| |||||||||     |||||| ||||| ||||||||||||||||    
T  32521272 ggttgatttttaaaaattcatccaaaccaaaccaaatcaatgcagtttggattggttcggtttgtg 32521207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 2e-60; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 721 - 870
Target Start/End: Original strand, 10661096 - 10661246
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| || ||||||||||    
T  10661096 taggggtgttcgcggtgcggtttggttcggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggttcggttgatttt 10661195  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  10661196 taaaaagtcatccaaaccaaaccaatgcggtttgtattggttcggtttgtg 10661246  T

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Target: chr8; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 721 - 870
Target Start/End: Complemental strand, 36910471 - 36910322
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||| |||| ||||| || ||||||||||    
T  36910471 taggggtgttcgcggtgcggtttggtttgattttgagcataaaagtcatcaaaaccgcgagataaaaaagcatgcggtttagtttggttcggttgatttt 36910372  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    |||||||||||| |||||||||||| |||| ||| ||||||||||||||||    
T  36910371 taaaaagtcatccaaaccaaaccaa-gcggcttggattggttcggtttgtg 36910322  T

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Target: chr8; HSP #3
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 724 - 870
Target Start/End: Original strand, 44672734 - 44672881
Alignment:
Q  724 gggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaac-cgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaa 822  Q
    ||||||| ||||||| |||||||| |||||||||||||||||||||||||  |||||||||||||| ||||| |||||||||| || | |||||||||||    
T  44672734 gggtgtttgcggtgcagtttggttcggttttgagcataaaagtcatccaaatcgcgagataaaaaaacatgcggtttggtttggttcgattgatttttaa 44672833  T
Q  823 aaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    ||||||||| ||||||||||||||||||||| ||||||||| ||||||    
T  44672834 aaagtcatccaaaccaaaccaatgcggtttggattggttcgatttgtg 44672881  T

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Target: chr8; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 714 - 844
Target Start/End: Original strand, 14549159 - 14549290
Alignment:
Q  714 ttaagaataggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggt 812  Q
    ||||||||| |||||||||||||| |||||| || ||||||||||||||||||||||||| ||| |||||||||||  |||| ||||||||||||| |||    
T  14549159 ttaagaataagggtgttcgcggtgtggtttgattcggttttgagcataaaagtcatccaaaccgtgagataaaaaaatatgcggtttggtttgattcggt 14549258  T
Q  813 tgatttttaaaaagtcatcaaaaccaaaccaa 844  Q
    ||||||||||||||||||| ||||||||||||    
T  14549259 tgatttttaaaaagtcatccaaaccaaaccaa 14549290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 721 - 840
Target Start/End: Original strand, 33068208 - 33068328
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||| ||  |||||||||    
T  33068208 taggggtgttcgtggtgcggtttggttcggttttgagcataaaagtcatccaaaccgcaagataaaaaagcatgcggtttggtttggttcagttgatttt 33068307  T
Q  820 taaaaagtcatcaaaaccaaa 840  Q
    |||||||||||| ||||||||    
T  33068308 taaaaagtcatccaaaccaaa 33068328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 725 - 844
Target Start/End: Complemental strand, 3006708 - 3006588
Alignment:
Q  725 ggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaa 823  Q
    ||||||||||||||||||||||| |||||  ||||||| | |||||||| |||||||| |||||||||||| |||||||||| || ||||||||||||||    
T  3006708 ggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaaa 3006609  T
Q  824 aagtcatcaaaaccaaaccaa 844  Q
    |||||||| ||||||||||||    
T  3006608 aagtcatccaaaccaaaccaa 3006588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 721 - 844
Target Start/End: Complemental strand, 5803386 - 5803262
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||| ||||||||||||| | |||  ||||||| | |||||||| |||||||| |||||||||||| |||||||||| || ||||||||||    
T  5803386 taggggtgttcgcagtgcggtttggttcgatttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 5803287  T
Q  820 taaaaagtcatcaaaaccaaaccaa 844  Q
    |||||||||||| ||||||||||||    
T  5803286 taaaaagtcatccaaaccaaaccaa 5803262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 721 - 870
Target Start/End: Complemental strand, 18170160 - 18170010
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||| | |||||||||||||| |||||||| ||||||||||||| || ||||||||||||||||| ||| |||||||| |     ||||| |||    
T  18170160 taggggtgtttgaggtgcggtttggttcggttttgaacataaaagtcatctaaaccgcgagataaaaaagcgtgcggtttggttcg-----gttgagttt 18170066  T
Q  820 taaaaagtcatcaaaaccaaaccaa-----tgcggtttgaattggttcggtttgtg 870  Q
    |||||||||||||||||||||||||     ||||||||| ||||||||||||||||    
T  18170065 taaaaagtcatcaaaaccaaaccaaaccaatgcggtttggattggttcggtttgtg 18170010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 721 - 870
Target Start/End: Complemental strand, 18633728 - 18633577
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||| | |||||||||||||| |||||||| ||||||||||||| || ||||||||||||||||| ||| |||||||| |     ||||| |||    
T  18633728 taggggtgtttgaggtgcggtttggttcggttttgaacataaaagtcatctaaaccgcgagataaaaaagcgtgcggtttggttcg-----gttgagttt 18633634  T
Q  820 taaaaagtcatcaaaaccaaa------ccaatgcggtttgaattggttcggtttgtg 870  Q
    |||||||||||||||||||||      ||||||||||||| ||||||||||||||||    
T  18633633 taaaaagtcatcaaaaccaaaccaaaaccaatgcggtttggattggttcggtttgtg 18633577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 721 - 870
Target Start/End: Original strand, 3681876 - 3682020
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||   |||||||||||| ||||||||  |||||||| |||||| ||||||||||||||| ||||| ||||||||||     ||||| |||    
T  3681876 taggggtgttcgtattgcggtttggttcggttttgaatataaaagttatccaaaccgcgagataaaaaa-catgcggtttggtttg-----gttgacttt 3681969  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    |||||||||||| |||| |||||||||||| ||| ||||||||| ||||||    
T  3681970 taaaaagtcatccaaactaaaccaatgcggcttggattggttcgatttgtg 3682020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 725 - 844
Target Start/End: Complemental strand, 6200989 - 6200868
Alignment:
Q  725 ggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaa 823  Q
    |||||||||||| ||| |||||| |||||||||||||||||| |||| ||| ||||||||||||| ||||| |||| ||||| ||  |||||||||||||    
T  6200989 ggtgttcgcggtacggcttggttcggttttgagcataaaagtaatccaaactgcgagataaaaaaacatgcggtttagtttggttaagttgatttttaaa 6200890  T
Q  824 aagtcat-caaaaccaaaccaa 844  Q
    ||||||| ||||| ||||||||    
T  6200889 aagtcatccaaaatcaaaccaa 6200868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 723 - 811
Target Start/End: Original strand, 30392083 - 30392172
Alignment:
Q  723 ggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttgg 811  Q
    |||||||| ||||||||||  |||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||    
T  30392083 ggggtgtttgcggtgcggtgcggttcggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggtttgg 30392172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 721 - 824
Target Start/End: Original strand, 44336714 - 44336819
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagat-aaaaaagcatgcagtttggtttgatttggttgattt 818  Q
    |||| |||||||||||||||||||||| |||||||||  |||||||||||| |||||| |||| |||||| ||||| |||||||||| || |||||| ||    
T  44336714 taggagtgttcgcggtgcggtttggttcggttttgagtttaaaagtcatccgaaccgcaagataaaaaaaacatgcggtttggtttggttcggttgactt 44336813  T
Q  819 ttaaaa 824  Q
    ||||||    
T  44336814 ttaaaa 44336819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 724 - 824
Target Start/End: Complemental strand, 24682227 - 24682126
Alignment:
Q  724 gggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaa 822  Q
    ||||||||| ||||||| |||||| |||||||||  ||||| |||||| |||||| ||||||| ||| |||||||||||||||||| | |||| ||||||    
T  24682227 gggtgttcgtggtgcggcttggttcggttttgaggctaaaattcatccgaaccgcaagataaataagtatgcagtttggtttgattcgattgacttttaa 24682128  T
Q  823 aa 824  Q
    ||    
T  24682127 aa 24682126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 721 - 813
Target Start/End: Complemental strand, 31497749 - 31497656
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggtt 813  Q
    ||||||||||| || |||| ||||||||||||||||   |||||||||||| |||||| ||||||||||||| || |||||||||| |||||||    
T  31497749 taggggtgttcacgatgcgctttggtttggttttgaaggtaaaagtcatccgaaccgcaagataaaaaagcacgcggtttggtttggtttggtt 31497656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 721 - 824
Target Start/End: Original strand, 11218892 - 11218996
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||||| |||||||||||||| | |||||||  |||||||||||| || ||| ||||||| ||| ||||  ||||||||| ||||||||| |||    
T  11218892 taggggtgttcggggtgcggtttggttcgattttgaggctaaaagtcatccgaaacgcaagataaataagtatgcgatttggtttggtttggttgacttt 11218991  T
Q  820 taaaa 824  Q
    |||||    
T  11218992 taaaa 11218996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 720 - 820
Target Start/End: Complemental strand, 15272447 - 15272346
Alignment:
Q  720 ataggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgattt 818  Q
    |||||||| ||||||||||||||||||  |||||||||  |||||||||||| ||| ||  |||||||||||| || |||||||||| ||| ||||| ||    
T  15272447 ataggggttttcgcggtgcggtttggtacggttttgagattaaaagtcatccgaacggcaggataaaaaagcacgcggtttggtttggtttagttgactt 15272348  T
Q  819 tt 820  Q
    ||    
T  15272347 tt 15272346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 720 - 820
Target Start/End: Complemental strand, 15452816 - 15452715
Alignment:
Q  720 ataggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgattt 818  Q
    |||||||| ||||||||||||||||||  |||||||||  |||||||||||| ||| ||  |||||||||||| || |||||||||| ||| ||||| ||    
T  15452816 ataggggttttcgcggtgcggtttggtacggttttgagattaaaagtcatccgaacggcaggataaaaaagcacgcggtttggtttggtttagttgactt 15452717  T
Q  819 tt 820  Q
    ||    
T  15452716 tt 15452715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 724 - 824
Target Start/End: Complemental strand, 22811310 - 22811209
Alignment:
Q  724 gggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatc-caaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaa 822  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||  ||| || ||||||| | | |||| |||||||||| || |||||| ||||||    
T  22811310 gggtgttcgcggtgcggtttggtttgattttgaggctaaaagtcatctgaactgcaagataaatatgtatgctgtttggtttggttcggttgacttttaa 22811211  T
Q  823 aa 824  Q
    ||    
T  22811210 aa 22811209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 719 - 824
Target Start/End: Original strand, 40436376 - 40436483
Alignment:
Q  719 aataggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagat-aaaaaagcatgcagtttggtttgatttggttgat 816  Q
    ||||||||||||||||||||||||||||| |||||||||  ||||||| |||| ||  || |||| |||||| ||||| |||||||||| || ||||||     
T  40436376 aataggggtgttcgcggtgcggtttggttcggttttgagggtaaaagtgatccaaattgcaagataaaaaaaacatgccgtttggtttggttcggttgac 40436475  T
Q  817 ttttaaaa 824  Q
    ||| ||||    
T  40436476 tttaaaaa 40436483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 721 - 805
Target Start/End: Complemental strand, 12883870 - 12883785
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtca-tccaaccgcgagataaaaaagcatgcagtttggtttg 805  Q
    ||||||||||||||||||||||||||| |||||||||  ||||||||| || |||| | | ||||| ||| |||| ||||||||||    
T  12883870 taggggtgttcgcggtgcggtttggttcggttttgaggttaaaagtcattcgaaccacaaaataaataagtatgcggtttggtttg 12883785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 721 - 814
Target Start/End: Original strand, 8035985 - 8036079
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttg 814  Q
    ||||||||||| |||||| ||||  || ||||| ||   |||||||||||  |||||| ||||||||||||||||||||||||||| || |||||    
T  8035985 taggggtgttcacggtgcagtttcattcggtttagaaggtaaaagtcatctgaaccgcaagataaaaaagcatgcagtttggtttggttcggttg 8036079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 722 - 824
Target Start/End: Original strand, 33565898 - 33566003
Alignment:
Q  722 aggggtgttcgcggtgcggtttggtttggttttgagcataaaagtca-tccaaccgcgagat--aaaaaagcatgcagtttggtttgatttggttgattt 818  Q
    ||||||||| ||||||| ||||||||||||||||||  ||||||||| |  |||||| ||||  ||||||| |||| |||||||||| || |||||| ||    
T  33565898 aggggtgtttgcggtgcagtttggtttggttttgaggctaaaagtcatttgaaccgcaagataaaaaaaagtatgcggtttggtttggttcggttgactt 33565997  T
Q  819 ttaaaa 824  Q
     |||||    
T  33565998 ctaaaa 33566003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 833 - 870
Target Start/End: Original strand, 14549289 - 14549326
Alignment:
Q  833 aaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  14549289 aaaccaaaccaatgcggtttggattggttcggtttgtg 14549326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 721 - 853
Target Start/End: Complemental strand, 28073331 - 28073198
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatc-caaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||| |||| ||| ||  |||||||||||  |||||| | |||||||| ||||  |||| ||||| ||  ||||| |||    
T  28073331 taggggtgttcgcggtgcggtttggcttgggtttaaggctaaaagtcatctgaaccgcaatataaaaaaacatgtggtttagtttggttcagttgacttt 28073232  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttg 853  Q
    ||||| |  | |  ||||||||||||| ||||||    
T  28073231 taaaatgaaaaccgaaccaaaccaatgtggtttg 28073198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 751 - 866
Target Start/End: Complemental strand, 38926526 - 38926420
Alignment:
Q  751 ttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaaaagtcatcaaaaccaaaccaatgcgg 849  Q
    ||||||||||||||||||||| |||||||| |||||||| ||||| ||| ||||          || ||||||||||||||   ||||||||||||| ||    
T  38926526 ttttgagcataaaagtcatcctaaccgcgaaataaaaaaacatgcggttcggtt----------gacttttaaaaagtcatttgaaccaaaccaatgtgg 38926437  T
Q  850 tttgaattggttcggtt 866  Q
    |||| ||||||||||||    
T  38926436 tttggattggttcggtt 38926420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 721 - 824
Target Start/End: Original strand, 4785178 - 4785282
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcat-ccaaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||||||||| |  ||||||| |||||||||  |||||||||| | ||||||   ||||||||| |||| ||||| |||| || |||||| |||    
T  4785178 taggggtgttcgcggtacaatttggttcggttttgagattaaaagtcatacgaaccgcagaataaaaaagtatgcggtttgatttggttcggttgacttt 4785277  T
Q  820 taaaa 824  Q
    |||||    
T  4785278 taaaa 4785282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 721 - 808
Target Start/End: Complemental strand, 9012972 - 9012884
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatt 808  Q
    ||||||||||||||||| || |||||| | |||||||  ||||||||| || |||||| ||||||||| |  ||| |||||||||||||    
T  9012972 taggggtgttcgcggtgtgggttggttcgattttgaggctaaaagtcacccgaaccgcaagataaaaatgtgtgcggtttggtttgatt 9012884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 719 - 813
Target Start/End: Complemental strand, 30254273 - 30254178
Alignment:
Q  719 aataggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatc-caaccgcgagataaaaaagcatgcagtttggtttgatttggtt 813  Q
    |||||||||| ||| |||||||||||||||| |||||||  ||||| | |||  |||||| ||||||| |||||||  |||||||| | |||||||    
T  30254273 aataggggtgatcgtggtgcggtttggtttgattttgaggctaaaaattatcaaaaccgcaagataaataagcatgtggtttggttcggtttggtt 30254178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 724 - 757
Target Start/End: Complemental strand, 11864056 - 11864023
Alignment:
Q  724 gggtgttcgcggtgcggtttggtttggttttgag 757  Q
    |||||||||||||||||||||| |||||||||||    
T  11864056 gggtgttcgcggtgcggtttggattggttttgag 11864023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 724 - 757
Target Start/End: Complemental strand, 37162776 - 37162743
Alignment:
Q  724 gggtgttcgcggtgcggtttggtttggttttgag 757  Q
    ||||||||| ||||||||||||||||||||||||    
T  37162776 gggtgttcgtggtgcggtttggtttggttttgag 37162743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 6e-58; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 721 - 870
Target Start/End: Complemental strand, 44979909 - 44979759
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| || ||||||||||    
T  44979909 taggggtgttcgcggtgcggtttggttcggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggttcggttgatttt 44979810  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    |||||||||||| ||||||||||||||||||||| |||||||||| |||||    
T  44979809 taaaaagtcatccaaaccaaaccaatgcggtttggattggttcggcttgtg 44979759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 721 - 862
Target Start/End: Original strand, 9811333 - 9811475
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| |||||  ||||||| | |||||||| |||||||| |||||| ||||| |||||||||| || ||||||||||    
T  9811333 taggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaaacatgcggtttggtttggttcggttgatttt 9811432  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttc 862  Q
    |||||||||||| ||||||||||||||||||||| ||||||||    
T  9811433 taaaaagtcatccaaaccaaaccaatgcggtttggattggttc 9811475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 724 - 870
Target Start/End: Complemental strand, 25298388 - 25298241
Alignment:
Q  724 gggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaacc-gcgagataaaaaagcatgcagtttggtttgatttggttgatttttaa 822  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||| || | ||||||||||||| ||| | ||| |||||| || |||||||||||||    
T  25298388 gggtgttcgcggtgcagtttggttcggttttgagcataaaagtcatcgaaactgcgagataaaaaaacattcggttcggtttggttcggttgatttttaa 25298289  T
Q  823 aaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    ||||||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  25298288 aaagtcatccaaaccaaactaatacggtttggattggttcggtttgtg 25298241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 744 - 870
Target Start/End: Original strand, 11375867 - 11375994
Alignment:
Q  744 ggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaaaagtcatcaaaaccaaacc 842  Q
    |||| |||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||| || |||||||||||||||||||||| ||||||||||    
T  11375867 ggttcggttttaagcataaaagtcatccaaaccgcgagataaaaaaacatgcagtttggtttggttcggttgatttttaaaaagtcatccaaaccaaacc 11375966  T
Q  843 aatgcggtttgaattggttcggtttgtg 870  Q
    ||||||| ||| |||| |||| ||||||    
T  11375967 aatgcggattggattgattcgttttgtg 11375994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 721 - 844
Target Start/End: Complemental strand, 36413780 - 36413656
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| |||||  ||||||| | |||||||| |||||||| |||||||||||| |||||||||| || ||||||||||    
T  36413780 taggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 36413681  T
Q  820 taaaaagtcatcaaaaccaaaccaa 844  Q
    |||||||||||| ||||||||||||    
T  36413680 taaaaagtcatccaaaccaaaccaa 36413656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 721 - 844
Target Start/End: Complemental strand, 19937264 - 19937141
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||  |||||||||| || | ||||||||    
T  19937264 taggggtgttcgcggtgcggtttggttaggatttgagcataaaagtcatccaaaccgcgagataaaaaaacatg-ggtttggtttggttcgattgatttt 19937166  T
Q  820 taaaaagtcatcaaaaccaaaccaa 844  Q
    |||||||||||| ||| ||||||||    
T  19937165 taaaaagtcatccaaatcaaaccaa 19937141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 721 - 863
Target Start/End: Complemental strand, 42785769 - 42785621
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||| || || |||||||||||| |||| |||||||||| || | ||||||||    
T  42785769 taggggtgttcgcggtgcggtttggttcgattttgagcataaaagtcatccaaatcgtgagataaaaaaggatgcggtttggtttggttcgcttgatttt 42785670  T
Q  820 taaaaagtcat-----caaaaccaaaccaatgcggtttgaattggttcg 863  Q
    |||||| ||||     | ||||||||||||||||||||| |||||||||    
T  42785669 taaaaactcattcaaaccaaaccaaaccaatgcggtttggattggttcg 42785621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 721 - 870
Target Start/End: Complemental strand, 17916991 - 17916846
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaaccgc-gagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||| |||||||  ||||||||||||||||| |||||| |   ||||||||||| ||||| |||||||||| || ||||||||||    
T  17916991 taggggtgttcgcggtgcgatttggttcagttttgagcataaaagttatccaaactttgagataaaaaaacatgcggtttggtttggttcggttgatttt 17916892  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    |||||||||||     |||||||||||||| ||| ||||||||||||||||    
T  17916891 taaaaagtcat-----ccaaaccaatgcggcttggattggttcggtttgtg 17916846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 721 - 862
Target Start/End: Original strand, 18356846 - 18356988
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaacc-gcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||| ||||||||||||| ||||||| |||||||||||||||||||||| || | |||||||||| |||||||| || ||| ||| |||| || |||||    
T  18356846 tagggatgttcgcggtgcgatttggttcggttttgagcataaaagtcatctaaactgcgagataaagaagcatgcggtatggattggtttgattaatttt 18356945  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttc 862  Q
    |||||||||||  ||||||||||||||||| ||| ||||||||    
T  18356946 taaaaagtcattcaaaccaaaccaatgcggcttggattggttc 18356988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 724 - 844
Target Start/End: Original strand, 44035251 - 44035373
Alignment:
Q  724 gggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaa-aagcatgcagtttggtttgatttggttgattttta 821  Q
    |||||||||| | ||||||||||| ||||||||||||||||||||||||| |||| | |||||| |||||||| |||||||||| || ||||||||||||    
T  44035251 gggtgttcgcagggcggtttggttcggttttgagcataaaagtcatccaaaccgcaaaataaaaaaagcatgcggtttggtttggttcggttgattttta 44035350  T
Q  822 aaaagtcatcaaaaccaaaccaa 844  Q
    |||||||||| ||||||||||||    
T  44035351 aaaagtcatccaaaccaaaccaa 44035373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 721 - 844
Target Start/End: Original strand, 16578578 - 16578702
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||||||| |||||||||||| |||||  ||||||| | |||||||| |||||||| |||||||||||| |||||||||| || | ||||||||    
T  16578578 taggggtgttcgcgatgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcgattgatttt 16578677  T
Q  820 taaaaagtcatcaaaaccaaaccaa 844  Q
    |||||||||||| ||||||||||||    
T  16578678 taaaaagtcatccaaaccaaaccaa 16578702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 721 - 824
Target Start/End: Original strand, 17762684 - 17762788
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||| ||||| |||||||||||||  ||||||||| || ||||||||||||||||| ||||| |||||||||| || |||||| |||    
T  17762684 taggggtgttcgcggtgtggttttgtttggttttgaggctaaaagtcaaccgaaccgcgagataaaaaaacatgcggtttggtttggttcggttgacttt 17762783  T
Q  820 taaaa 824  Q
    |||||    
T  17762784 taaaa 17762788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 719 - 824
Target Start/End: Complemental strand, 27301626 - 27301520
Alignment:
Q  719 aataggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcca-accgcgagataaaaaagcatgcagtttggtttgatttggttgatt 817  Q
    |||||||||||||||| ||| |||||||| |||||||||  |||||| |||||  ||||| |||||||||||||||| ||||||||||||| |||||| |    
T  27301626 aataggggtgttcgcgctgcagtttggttcggttttgagattaaaagccatccggaccgcaagataaaaaagcatgcggtttggtttgattcggttgact 27301527  T
Q  818 tttaaaa 824  Q
    |||||||    
T  27301526 tttaaaa 27301520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 721 - 853
Target Start/End: Complemental strand, 15320719 - 15320586
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| | |||||||  |||||||||||| ||||| ||  ||||||||||||||||| |||||| ||  |||||||||    
T  15320719 taggggtgttcgcggtgcggtttggttcgattttgaggctaaaagtcatccaaaccgtgaagtaaaaaagcatgcagttaggtttggttcagttgatttt 15320620  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttg 853  Q
    |||||    ||| ||||||||| |||| ||||||    
T  15320619 taaaataaaatccaaaccaaactaatgtggtttg 15320586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 722 - 869
Target Start/End: Original strand, 34910254 - 34910404
Alignment:
Q  722 aggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgattttt 820  Q
    ||||||||| ||||||| ||||||||  ||||||||||||||| |||| ||| |||||||||||||||  |   | |  |||||| ||| ||||||||||    
T  34910254 aggggtgtttgcggtgcagtttggttcagttttgagcataaaaatcattcaaaccgcgagataaaaaaaaacata-tgcggtttggttttgttgattttt 34910352  T
Q  821 aaaaagtcatca---aaaccaaaccaatgcggtttgaattggttcggtttgt 869  Q
    ||||||||||||   ||||||||||||||||| ||| ||| |||||||||||    
T  34910353 aaaaagtcatcattcaaaccaaaccaatgcggcttggattagttcggtttgt 34910404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 721 - 824
Target Start/End: Complemental strand, 5862771 - 5862667
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatc-caaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||||||||||||||||| |||| |||||||  |||||||||||  || ||| | ||||||||| |||| |||||||||| || |||||| |||    
T  5862771 taggggtgttcgcggtgcggtttgatttgattttgagggtaaaagtcatctaaatcgcaaaataaaaaagtatgcggtttggtttggttcggttgacttt 5862672  T
Q  820 taaaa 824  Q
    |||||    
T  5862671 taaaa 5862667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 721 - 824
Target Start/End: Original strand, 41461024 - 41461128
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||||||||||| |||||||| |||||| ||  ||||||||| || |||||| || |||||||| |||| |||||||||| || |||||| |||    
T  41461024 taggggtgttcgcggtgcagtttggttcggtttttagactaaaagtcaaccgaaccgcaagctaaaaaagtatgcggtttggtttggttcggttgacttt 41461123  T
Q  820 taaaa 824  Q
    |||||    
T  41461124 taaaa 41461128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 721 - 851
Target Start/End: Complemental strand, 12041729 - 12041598
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatc-caaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||| |||||| ||||||||| |||||||||  |||||||||||  |||||  |||||||||| ||||| ||||| |||| || |||||| |||    
T  12041729 taggggtgtttgcggtgtggtttggttcggttttgaggctaaaagtcatctgaaccgtaagataaaaaaacatgcggtttgatttggttcggttgacttt 12041630  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtt 851  Q
    |||||    |||  ||||||||||||||||||    
T  12041629 taaaataaaatccgaaccaaaccaatgcggtt 12041598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 723 - 824
Target Start/End: Original strand, 28790450 - 28790552
Alignment:
Q  723 ggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgattttta 821  Q
    |||||||||| ||||||||||||||  |||||||   |||||||||||  |||||| |||||||||||||||| ||||| || |||| |||||| |||||    
T  28790450 ggggtgttcgtggtgcggtttggttcagttttgatgttaaaagtcatctgaaccgcaagataaaaaagcatgcggtttgattagattcggttgactttta 28790549  T
Q  822 aaa 824  Q
    |||    
T  28790550 aaa 28790552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 721 - 853
Target Start/End: Original strand, 1330952 - 1331085
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||| ||| ||||||||| || |||||| ||   |||| |||||| |||| | || ||||||||||||||| |||||||| || |||||| |||    
T  1330952 taggggtgtttgcgatgcggtttgattcggttttaagacgaaaaatcatccgaaccacaaggtaaaaaagcatgcagattggtttggttcggttgacttt 1331051  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttg 853  Q
    |||||    ||| |||||||||||||| ||||||    
T  1331052 taaaataaaatccaaaccaaaccaatgtggtttg 1331085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 721 - 769
Target Start/End: Complemental strand, 6946682 - 6946634
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcat 769  Q
    |||||||||||||||||||||| | |||||| |||||||||||||||||    
T  6946682 taggggtgttcgcggtgcggttggttttggtcttgagcataaaagtcat 6946634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 781 - 824
Target Start/End: Complemental strand, 30759727 - 30759684
Alignment:
Q  781 ataaaaaagcatgcagtttggtttgatttggttgatttttaaaa 824  Q
    |||||||||||||||||||||||||||| |||||  ||||||||    
T  30759727 ataaaaaagcatgcagtttggtttgattcggttggcttttaaaa 30759684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 721 - 866
Target Start/End: Original strand, 44085431 - 44085578
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaa-aagcatgcagtttggtttgatttggttgattt 818  Q
    ||||||||||||   ||||||||||||  ||||||||  | |||||||||  |||||| |||||||| |||||||| |||||||||| || |||||| ||    
T  44085431 taggggtgttcgtcatgcggtttggttcagttttgagggttaaagtcatctgaaccgcaagataaaaaaagcatgcggtttggtttggttcggttgactt 44085530  T
Q  819 ttaaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtt 866  Q
    | ||||    |||  || |||||||||||||||||  |||| ||||||    
T  44085531 taaaaataaaatctgaatcaaaccaatgcggtttgggttggatcggtt 44085578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 774 - 824
Target Start/End: Original strand, 4657728 - 4657778
Alignment:
Q  774 ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaaa 824  Q
    |||| |||||||||| |||| |||||||||| ||| |||||||||||||||    
T  4657728 ccgcaagataaaaaaacatgtagtttggtttaattcggttgatttttaaaa 4657778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 785 - 858
Target Start/End: Original strand, 32855239 - 32855312
Alignment:
Q  785 aaaagcatgcagtttggtttgatttggttgatttttaaaaagtcatcaaaaccaaaccaatgcggtttgaattg 858  Q
    ||||||| |||||| |||||||||| ||||| |||||||||   | ||||||||||| |||||| ||| |||||    
T  32855239 aaaagcacgcagttcggtttgatttagttgacttttaaaaacaaaacaaaaccaaactaatgcgatttaaattg 32855312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 1e-55; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 721 - 870
Target Start/End: Complemental strand, 27054872 - 27054722
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||| || ||||||||||    
T  27054872 taggggtgtttgcggtgcggtttggtttggttttgagcaaaaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggttcggttgatttt 27054773  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    ||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  27054772 taaaaagccatccaaaccaaaccaatgcggtttggattggttcggtttgtg 27054722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 721 - 871
Target Start/End: Original strand, 13852251 - 13852407
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaacc-gcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||| || ||| ||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||| || ||||||||||    
T  13852251 taggggtgtttgcagtgtggtttggttcggttttgagcataaaagtcatccaaactgcgagataaaaaagcatgcggtttggtttggttcggttgatttt 13852350  T
Q  820 taaaaagtcat-----caaaaccaaaccaatgcggtttgaattggttcggtttgtga 871  Q
    |||||||||||     | ||||||||||||||||||||| |||||||||||||||||    
T  13852351 taaaaagtcatccaaaccaaaccaaaccaatgcggtttggattggttcggtttgtga 13852407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 717 - 863
Target Start/End: Complemental strand, 7209413 - 7209266
Alignment:
Q  717 agaataggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttga 815  Q
    ||||||||||||||||| ||||||||||||| ||||||||  ||||||||||||||| || |||||||||||||||| | |||||||||| || ||||||    
T  7209413 agaataggggtgttcgcagtgcggtttggttcggttttgaatataaaagtcatccaaaccacgagataaaaaagcatacggtttggtttggttcggttga 7209314  T
Q  816 tttttaaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcg 863  Q
    |||||||||||||||| ||||||||||||||||  ||| |||||||||    
T  7209313 tttttaaaaagtcatccaaaccaaaccaatgcgtcttggattggttcg 7209266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 721 - 862
Target Start/End: Complemental strand, 11206498 - 11206356
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| |||||  ||||||| | |||||||| |||||||| |||||| ||||| |||||||||| || ||||||||||    
T  11206498 taggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaaacatgcggtttggtttggttcggttgatttt 11206399  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttc 862  Q
    |||||||||||| ||||||||||||||||||||| ||||||||    
T  11206398 taaaaagtcatccaaaccaaaccaatgcggtttggattggttc 11206356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 721 - 866
Target Start/End: Complemental strand, 31983135 - 31982990
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||||||||||||||| |||| |||||||||||||||||| |||||| |||||||||||||||  ||||||||||||||| ||  |||||||||    
T  31983135 taggggtgttcgcggtgcggtt-ggttcggttttgagcataaaagttatccaaaccgcgagataaaaaaatatgcagtttggtttggttcagttgatttt 31983037  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtt 866  Q
    |||||||||||| |||||||||||| | || ||| ||||||||||||    
T  31983036 taaaaagtcatccaaaccaaaccaacgtgggttggattggttcggtt 31982990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 732 - 867
Target Start/End: Original strand, 47903201 - 47903337
Alignment:
Q  732 gcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaaaagtcat 830  Q
    |||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||||||||||| |||||||||| || |||||||||||||||||||||    
T  47903201 gcggtgcggtttggttcggttttaagcataaaaatcatccaaaccgcgagataaaaaagcatgcggtttggtttggttcggttgatttttaaaaagtcat 47903300  T
Q  831 caaaaccaaaccaatgcggtttgaattggttcggttt 867  Q
    | |||||||||||||| |  ||| ||||||| |||||    
T  47903301 ccaaaccaaaccaatgtgacttggattggtttggttt 47903337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 724 - 870
Target Start/End: Original strand, 32823550 - 32823696
Alignment:
Q  724 gggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaac-cgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaa 822  Q
    ||||| || |||||| |||||||| | |||| ||||||||||||||||||  |||||||||||||||||||| |||||||| | || |||||||||||||    
T  32823550 gggtgctcacggtgctgtttggttcgatttttagcataaaagtcatccaaatcgcgagataaaaaagcatgcggtttggttgg-ttcggttgatttttaa 32823648  T
Q  823 aaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    ||||||||| |||||||| |||||||||||| ||||||||||||||||    
T  32823649 aaagtcatccaaaccaaatcaatgcggtttggattggttcggtttgtg 32823696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 727 - 844
Target Start/End: Original strand, 10069142 - 10069260
Alignment:
Q  727 tgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaaaa 825  Q
    ||||||||||||||||||||| |||||||||||||||||||||| || |||||| |||||||| ||||| ||||||||||||| ||||||||||||||||    
T  10069142 tgttcgcggtgcggtttggttcggttttgagcataaaagtcatctaaaccgcgatataaaaaaacatgctgtttggtttgattcggttgatttttaaaaa 10069241  T
Q  826 gtcatcaaaaccaaaccaa 844  Q
    |||||  ||||||||||||    
T  10069242 gtcattcaaaccaaaccaa 10069260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 721 - 844
Target Start/End: Original strand, 10671763 - 10671887
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| |||||  ||||||| | |||||||| |||||||| |||||||||||| |||||||||| || ||||||||||    
T  10671763 taggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 10671862  T
Q  820 taaaaagtcatcaaaaccaaaccaa 844  Q
    |||||||||||| ||||||||||||    
T  10671863 taaaaagtcatccaaaccaaaccaa 10671887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 721 - 844
Target Start/End: Original strand, 47069611 - 47069735
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| |||||  ||||||| | |||||||| |||||||| |||||||||||| |||||||||| || ||||||||||    
T  47069611 taggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 47069710  T
Q  820 taaaaagtcatcaaaaccaaaccaa 844  Q
    |||||||||||| ||||||||||||    
T  47069711 taaaaagtcatccaaaccaaaccaa 47069735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 721 - 844
Target Start/End: Complemental strand, 47204597 - 47204473
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| |||||  ||||||| | |||||||| |||||||| |||||||||||| |||||||||| || ||||||||||    
T  47204597 taggggtgttcgcggtgcggtttggttcggtttcaagcataacaatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 47204498  T
Q  820 taaaaagtcatcaaaaccaaaccaa 844  Q
    |||||||||||| ||||||||||||    
T  47204497 taaaaagtcatccaaaccaaaccaa 47204473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 724 - 862
Target Start/End: Complemental strand, 31876766 - 31876633
Alignment:
Q  724 gggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaa 822  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| | || |||||||||||||    
T  31876766 gggtgttcgcggtgcggtttg-ttcggttttgagcataaaagtcatccaaaccgcgaaataaaaaagcatgcagtttggttcggttcggttgatttttaa 31876668  T
Q  823 aaagtcatcaaaaccaaaccaatgcggtttgaattggttc 862  Q
    ||||||||      ||||||||||||||||| ||||||||    
T  31876667 aaagtcat-----tcaaaccaatgcggtttggattggttc 31876633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 719 - 844
Target Start/End: Original strand, 12117540 - 12117666
Alignment:
Q  719 aataggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatt 817  Q
    |||||||||||| |||||||||||||||| |||||  || |||| | |||||||| |||||||| ||||||||||||||||||||||| || ||||||||    
T  12117540 aataggggtgtttgcggtgcggtttggttcggtttcaagtataataatcatccaaaccgcgagagaaaaaagcatgcagtttggtttggttcggttgatt 12117639  T
Q  818 tttaaaaagtcatcaaaaccaaaccaa 844  Q
    |||||||||||||| ||||||||||||    
T  12117640 tttaaaaagtcatccaaaccaaaccaa 12117666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 721 - 866
Target Start/End: Complemental strand, 18673330 - 18673184
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||   ||||||||  ||  ||||| |||    
T  18673330 taggggtgttcgcggtgcgatttggttcggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgtgatttggtttagttcagttgaattt 18673231  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtt 866  Q
     ||||||||||| |||||||| ||||| || ||| ||||||||||||    
T  18673230 caaaaagtcatccaaaccaaaacaatgtggcttggattggttcggtt 18673184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 721 - 844
Target Start/End: Complemental strand, 3213362 - 3213238
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| |||||  ||||||| | |||||||| |||||||| |||||||||||| |||||||||| || ||||||||||    
T  3213362 taggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 3213263  T
Q  820 taaaaagtcatcaaaaccaaaccaa 844  Q
    |||||||||||| ||| ||||||||    
T  3213262 taaaaagtcatccaaatcaaaccaa 3213238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 720 - 841
Target Start/End: Original strand, 5932637 - 5932759
Alignment:
Q  720 ataggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgattt 818  Q
    |||||| |||| ||||||||||||| || ||||||||||||||||||||||  ||||||||||||| ||||||||| |||||||||| ||  ||||||||    
T  5932637 atagggatgtttgcggtgcggtttgattcggttttgagcataaaagtcatctgaaccgcgagataagaaagcatgcggtttggtttggttaagttgattt 5932736  T
Q  819 ttaaaaagtcatcaaaaccaaac 841  Q
    ||||||||||||| |||||||||    
T  5932737 ttaaaaagtcatccaaaccaaac 5932759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 721 - 841
Target Start/End: Complemental strand, 8769103 - 8768982
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| |||||  || |||| | |||||||| |||||||| |||||||||||| |||||||||| || ||||||||||    
T  8769103 taggggtgttcgcggtgcggtttggttcggtttcaagtataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 8769004  T
Q  820 taaaaagtcatcaaaaccaaac 841  Q
    |||||||||||| |||||||||    
T  8769003 taaaaagtcatccaaaccaaac 8768982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 724 - 844
Target Start/End: Original strand, 1335264 - 1335384
Alignment:
Q  724 gggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaa 823  Q
    ||||||||||| ||| |||||||| ||||||||||||||||||||||||||  |||||||||||||||    |||||||||| || ||||||||||||||    
T  1335264 gggtgttcgcgttgcagtttggttcggttttgagcataaaagtcatccaactacgagataaaaaagcacctggtttggtttggttcggttgatttttaaa 1335363  T
Q  824 aagtcatcaaaaccaaaccaa 844  Q
    ||||| || ||||||||||||    
T  1335364 aagtcctccaaaccaaaccaa 1335384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 721 - 870
Target Start/End: Complemental strand, 2409106 - 2408951
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||| ||||| ||||||||||||||  ||||||||||||||||||||| ||||| ||||||||||| ||||| |||||||||||||   ||||||||    
T  2409106 taggggtattcgcagtgcggtttggtttaattttgagcataaaagtcatccaaaccgtgagataaaaaaccatgcggtttggtttgattcaattgatttt 2409007  T
Q  820 taaaaagtcat-----caaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    |||||||| ||     | |||||||| |||||||||||| ||||||| ||||||||    
T  2409006 taaaaagttattcaaactaaaccaaatcaatgcggtttggattggtttggtttgtg 2408951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 732 - 870
Target Start/End: Complemental strand, 24361622 - 24361484
Alignment:
Q  732 gcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaaaagtcat 830  Q
    |||||||||||||||| ||||||||| | |||||||||| || ||| ||||||||||| ||||  |||||||||| ||  ||||||||| ||||| ||||    
T  24361622 gcggtgcggtttggttcggttttgagaa-aaaagtcatctaaaccgtgagataaaaaaacatgtggtttggtttggttcagttgattttaaaaaaatcat 24361524  T
Q  831 caaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    | ||||||||||||||||||||| ||||||||||||||||    
T  24361523 ccaaaccaaaccaatgcggtttggattggttcggtttgtg 24361484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 724 - 866
Target Start/End: Original strand, 36507892 - 36508035
Alignment:
Q  724 gggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaacc-gcgagataaaaaagcatgcagtttggtttgatttggttgatttttaa 822  Q
    |||||||| ||||| |||||||||  | ||| ||||| ||||||||||||   | |||||| |||| ||||||||||| ||||||| |||||||||||||    
T  36507892 gggtgttcacggtgtggtttggttcagatttaagcattaaagtcatccaaattgtgagatagaaaatcatgcagtttgatttgattcggttgatttttaa 36507991  T
Q  823 aaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtt 866  Q
    ||||||||| ||||||||||||||||| ||| ||||||||||||    
T  36507992 aaagtcatccaaaccaaaccaatgcggcttggattggttcggtt 36508035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 721 - 824
Target Start/End: Complemental strand, 32942219 - 32942115
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||||||||||| |||||||| |||||||||  |||||||||||| ||| || |||||||||| ||||| ||||||||||||| |||||| |||    
T  32942219 taggggtgttcgcggtgcagtttggttcggttttgaggttaaaagtcatccgaactgcaagataaaaaaacatgcggtttggtttgattcggttgacttt 32942120  T
Q  820 taaaa 824  Q
    |||||    
T  32942119 taaaa 32942115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 749 - 844
Target Start/End: Original strand, 43429146 - 43429242
Alignment:
Q  749 ggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaaaagtcatcaaaaccaaaccaa 844  Q
    ||||| ||||||||||||||||||| |||||||||||||| ||| || |||||||||| || |||||||||||||||||||||| |||| |||||||    
T  43429146 ggtttggagcataaaagtcatccaaaccgcgagataaaaatgcacgcggtttggtttggttcggttgatttttaaaaagtcatccaaacaaaaccaa 43429242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 721 - 792
Target Start/End: Complemental strand, 45898200 - 45898128
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcat 792  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||    
T  45898200 taggggtgttcgcggtgcggtttggttcggttttgtgcataaaagtcatccaaaccgcgagataaaaaagcat 45898128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 717 - 822
Target Start/End: Complemental strand, 7206022 - 7205916
Alignment:
Q  717 agaataggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttga 815  Q
    ||||||||||||||||| ||| ||||||||| |||||||| |||| ||||||||| ||||||||||||||||| ||||| ||||| ||| |||  |||||    
T  7206022 agaataggggtgttcgcagtgtggtttggttcggttttgaacatagaagtcatccaaaccgcgagataaaaaaacatgcggtttgtttttattctgttga 7205923  T
Q  816 tttttaa 822  Q
    |||||||    
T  7205922 tttttaa 7205916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 723 - 868
Target Start/End: Original strand, 7760049 - 7760195
Alignment:
Q  723 ggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgattttta 821  Q
    ||||||||||||||| ||||||||| | |||||||||||||| |||||| ||| | |||||||||||| || ||||||||     |||||||||||||||    
T  7760049 ggggtgttcgcggtgtggtttggttcgattttgagcataaaaatcatccaaactgtgagataaaaaagtatccagtttgg-----tttggttgattttta 7760143  T
Q  822 aaaagtcatc-----aaaaccaaaccaatgcggtttgaattggttcggtttg 868  Q
    ||||||||||      ||| ||||||||||||| ||| ||||||| ||||||    
T  7760144 aaaagtcatctaaatcaaatcaaaccaatgcggcttggattggtttggtttg 7760195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 728 - 862
Target Start/End: Original strand, 11216104 - 11216239
Alignment:
Q  728 gttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaaaag 826  Q
    ||||| ||||| |||||||| | |||||||||||||| |||| | ||| | ||||||||||| ||||  ||||| ||| ||||| |||||||||||||||    
T  11216104 gttcgtggtgcagtttggttcgattttgagcataaaaatcattcgaactgtgagataaaaaaacatgtggtttgatttaatttgattgatttttaaaaag 11216203  T
Q  827 tcatcaaaaccaaaccaatgcggtttgaattggttc 862  Q
    |  || |||||||| |||||| ||||||||||||||    
T  11216204 ttgtccaaaccaaatcaatgcagtttgaattggttc 11216239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 726 - 824
Target Start/End: Complemental strand, 8568689 - 8568590
Alignment:
Q  726 gtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaaa 824  Q
    |||||||||||||||||||||| |||||||||  |||||||||||| |||||| ||||||| ||| |||| |||||||| | || |||||| ||||||||    
T  8568689 gtgttcgcggtgcggtttggttcggttttgaggttaaaagtcatccgaaccgcaagataaataagtatgcggtttggttcggttcggttgacttttaaaa 8568590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 719 - 844
Target Start/End: Original strand, 48675052 - 48675178
Alignment:
Q  719 aataggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatt 817  Q
    ||||| |||||||||| ||||||||| || |||||||  ||||||  ||| |||| |||| ||||||||||||| |  ||||| |||| || ||||||||    
T  48675052 aatagcggtgttcgcgatgcggtttgcttcggttttggacataaatttcacccaaaccgcaagataaaaaagcacgtggtttgatttggttcggttgatt 48675151  T
Q  818 tttaaaaagtcatcaaaaccaaaccaa 844  Q
    ||||| |||||||| || |||||||||    
T  48675152 tttaagaagtcatccaagccaaaccaa 48675178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 791 - 870
Target Start/End: Complemental strand, 24361357 - 24361278
Alignment:
Q  791 atgcagtttggtttgatttggttgatttttaaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    |||| |||||||||| || |||| ||||  ||||| ||||| ||||||||| ||||||||||| ||||||||||||||||    
T  24361357 atgcggtttggtttggttcggttaatttaaaaaaaatcatccaaaccaaactaatgcggtttggattggttcggtttgtg 24361278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 734 - 824
Target Start/End: Complemental strand, 26215251 - 26215160
Alignment:
Q  734 ggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaaa 824  Q
    ||||||||||||||||||||||||  |||||||||||| |||||| |||||| ||||||| | | || ||||| || |||||| ||||||||    
T  26215251 ggtgcggtttggtttggttttgaggttaaaagtcatccaaaccgcaagataataaagcatacgggtttgtttggttcggttgacttttaaaa 26215160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 721 - 824
Target Start/End: Original strand, 29628050 - 29628154
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| |||||||||   |||||  |||| |||||| || ||||||| ||||| ||||| |||| || || ||| |||    
T  29628050 taggggtgttcgcggtgcggtttggttcggttttgaggtgaaaaggtatccgaaccgcaaggtaaaaaaacatgcggtttgatttggttcggctgaattt 29628149  T
Q  820 taaaa 824  Q
    |||||    
T  29628150 taaaa 29628154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 719 - 757
Target Start/End: Complemental strand, 10338952 - 10338914
Alignment:
Q  719 aataggggtgttcgcggtgcggtttggtttggttttgag 757  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  10338952 aataggggtgttcgcggtgcagtttggtttggttttgag 10338914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 721 - 808
Target Start/End: Complemental strand, 30079732 - 30079639
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttt-----tgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatt 808  Q
    ||||||||||| |||||||||||||||||||||     |||   |||||||||||| || ||  |||||||||||||||| |||||||||||||    
T  30079732 taggggtgttcccggtgcggtttggtttggtttgattttgaaggtaaaagtcatccgaatcgtaagataaaaaagcatgcggtttggtttgatt 30079639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 724 - 769
Target Start/End: Original strand, 40848796 - 40848841
Alignment:
Q  724 gggtgttcgcggtgcggtttggtttggttttgagcataaaagtcat 769  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||    
T  40848796 gggtgttcgcggtgcggtttggttcggttttgagggtaaaagtcat 40848841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 822 - 870
Target Start/End: Original strand, 22366500 - 22366548
Alignment:
Q  822 aaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    |||||||||| ||||||||||||||||| ||| ||||||| ||||||||    
T  22366500 aaaagtcatccaaaccaaaccaatgcggcttggattggtttggtttgtg 22366548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 721 - 824
Target Start/End: Original strand, 34750930 - 34751034
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||| || ||||||||||||  ||||| ||  |||||||||| | || ||| | ||| ||||| |||| | |||||||| |||||||||||||    
T  34750930 taggggtgttcacgatgcggtttggttcagtttttaggctaaaagtcattcgaatcgcaatatataaaagtatgcgggttggtttggtttggttgatttt 34751029  T
Q  820 taaaa 824  Q
    |||||    
T  34751030 taaaa 34751034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 738 - 824
Target Start/End: Complemental strand, 8118403 - 8118316
Alignment:
Q  738 cggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaaa 824  Q
    ||||||||||  ||||||||  ||||| | |||| |||||| |||||||||||||||  |||||||||| || |||||||||| ||||    
T  8118403 cggtttggttctgttttgagggtaaaatttatccgaaccgcaagataaaaaagcatgtggtttggtttggttcggttgattttaaaaa 8118316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 721 - 845
Target Start/End: Complemental strand, 525006 - 524881
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||| |||||| ||||||||   |||| ||  ||||||| |||  |||||| ||||||||||  |||| ||||||||||||| | |||| |||    
T  525006 taggggtgttcacggtgcagtttggttcatttttaaggctaaaagttatctgaaccgcaagataaaaaaatatgcggtttggtttgattcgattgacttt 524907  T
Q  820 taaaaagtcatcaaaaccaaaccaat 845  Q
    |||||    ||| |||||||||||||    
T  524906 taaaataaaatccaaaccaaaccaat 524881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 719 - 815
Target Start/End: Complemental strand, 4153869 - 4153772
Alignment:
Q  719 aataggggtgttcgcggtgcggtttggtttggttttgagcataaaagtca-tccaaccgcgagataaaaaagcatgcagtttggtttgatttggttga 815  Q
    ||||||||||||  |||||||||||| ||  ||||||||  ||||||||| || |||  || ||||||||||||||| || ||||||| || ||||||    
T  4153869 aataggggtgtttacggtgcggtttgattcagttttgaggctaaaagtcattcgaacaacgggataaaaaagcatgcggtatggtttggttcggttga 4153772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 721 - 758
Target Start/End: Complemental strand, 8081054 - 8081017
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagc 758  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  8081054 taggggtgttcgcggtgcggtttagattggttttgagc 8081017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 760 - 824
Target Start/End: Original strand, 23729369 - 23729434
Alignment:
Q  760 taaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaaa 824  Q
    ||||| |||||| |||||| |||||||||||||||| ||||||||| | | |||||| ||||||||    
T  23729369 taaaaatcatccgaaccgcaagataaaaaagcatgcggtttggtttaactcggttgacttttaaaa 23729434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 722 - 813
Target Start/End: Original strand, 37375261 - 37375354
Alignment:
Q  722 aggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaac-cgcgagataaaaaag-catgcagtttggtttgatttggtt 813  Q
    ||||||||||| ||||||| |||||| | ||||||   ||||| ||||||||  ||| ||||||||||  |||||||||||||||| |||||||    
T  37375261 aggggtgttcgtggtgcgggttggttcgattttgatggtaaaattcatccaaatcgcaagataaaaaaaacatgcagtttggtttggtttggtt 37375354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 4e-53; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 721 - 870
Target Start/End: Complemental strand, 35040350 - 35040205
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  35040350 taggggtgttcgcggtgcggtttggttcggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggtttggttgatttt 35040251  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    |||||||||||     |||||||||||||||||| ||||||||||||||||    
T  35040250 taaaaagtcat-----ccaaaccaatgcggtttggattggttcggtttgtg 35040205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 721 - 870
Target Start/End: Original strand, 10590793 - 10590943
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaacc-gcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||| || ||||||||||    
T  10590793 taggggtggtcgcggtgcggtttggttcggttttgagcataaaagtcatccaaactgcgagataaaaaagcatgcggtttggtttggttcggttgatttt 10590892  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    ||||||||||||  |||||||||||||||| ||| ||||||||||||||||    
T  10590893 taaaaagtcatcccaaccaaaccaatgcggcttggattggttcggtttgtg 10590943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 721 - 862
Target Start/End: Original strand, 12270499 - 12270641
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| |||||  | ||||| | |||||||| |||||||| |||||||||||| |||||||||| || ||||||||||    
T  12270499 taggggtgttcgcggtgcggtttggttcggtttcaaacataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 12270598  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttc 862  Q
    |||||||||||| ||||||||||||||||||||| ||||||||    
T  12270599 taaaaagtcatccaaaccaaaccaatgcggtttggattggttc 12270641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 721 - 870
Target Start/End: Original strand, 15859668 - 15859826
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||| ||||| ||||||||| ||||||||||| ||||||||||||| ||||||||||    
T  15859668 taggggtgttcgcggtgccgtttggttcggttttgagcataaaagtcttccaaaccgcgagattaaaaagcatgcggtttggtttgattcggttgatttt 15859767  T
Q  820 taaaaagtcatcaaa--------accaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    |||| ||||||| ||        ||||||||||||||||||| ||||||||||||||||    
T  15859768 taaatagtcatccaaaccaaaccaccaaaccaatgcggtttggattggttcggtttgtg 15859826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 721 - 844
Target Start/End: Complemental strand, 10494521 - 10494397
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||| |||| || ||||||||||    
T  10494521 taggggtgtttgcggtgcggtttggtttggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatggggtttgatttggttcggttgatttt 10494422  T
Q  820 taaaaagtcatcaaaaccaaaccaa 844  Q
    |||||||||||| |||| |||||||    
T  10494421 taaaaagtcatccaaactaaaccaa 10494397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 721 - 844
Target Start/End: Complemental strand, 13811009 - 13810885
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| | |||||||||| ||  |||||||||    
T  13811009 taggggtgttcgcggtgaggtttggtttggttttgagcaaaaaagtcatccaaaccgcgagataaaaaagcatacggtttggtttggttcagttgatttt 13810910  T
Q  820 taaaaagtcatcaaaaccaaaccaa 844  Q
    |||||||||||| ||||||||||||    
T  13810909 taaaaagtcatccaaaccaaaccaa 13810885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 725 - 866
Target Start/End: Complemental strand, 5288040 - 5287898
Alignment:
Q  725 ggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaacc-gcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaa 823  Q
    ||||||||||||||||||||||| ||||||||||||  ||||||||||| | |||||||||| || |||||||||||||||| || ||||||||||||||    
T  5288040 ggtgttcgcggtgcggtttggttcggttttgagcatttaagtcatccaaactgcgagataaataaacatgcagtttggtttggttcggttgatttttaaa 5287941  T
Q  824 aagtcatcaaaaccaaaccaatgcggtttgaattggttcggtt 866  Q
    |||||||| |||| |||||||| ||| ||| ||||||||||||    
T  5287940 aagtcatccaaacgaaaccaatacggcttggattggttcggtt 5287898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 721 - 844
Target Start/End: Complemental strand, 5874292 - 5874168
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| |||||  ||||||| | |||||||| |||||||| |||||||||||| |||||||||| || ||||||||||    
T  5874292 taggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 5874193  T
Q  820 taaaaagtcatcaaaaccaaaccaa 844  Q
    |||||||||||| ||||||||||||    
T  5874192 taaaaagtcatccaaaccaaaccaa 5874168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 721 - 870
Target Start/End: Complemental strand, 10391162 - 10391011
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtca-tccaaccgcgagataaaaaagcatgcagtttggtttgatttggttgattt- 818  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||| || ||||||||||||||||||||||| |||||||||| ||   |||||||     
T  10391162 taggggtgttcgcggtgtggtttggttcggttttgagcataaaagtcattcgaaccgcgagataaaaaagcatgctgtttggtttggttcacttgatttc 10391063  T
Q  819 ttaaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    | ||||||||||| |||||||||||| | || ||| |||||||||| |||||    
T  10391062 taaaaaagtcatccaaaccaaaccaacgtggcttggattggttcggcttgtg 10391011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 721 - 844
Target Start/End: Original strand, 25136714 - 25136838
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||| ||||||||||||||| ||||||||||||| |||| |||| ||| | || |||||||||||||| ||| |||||| || |||||  |||    
T  25136714 taggggtgttcacggtgcggtttggttcggttttgagcatacaagtgatccaaacagtgaaataaaaaagcatgcggttcggtttggttcggttggattt 25136813  T
Q  820 taaaaagtcatcaaaaccaaaccaa 844  Q
    |||||||||||| ||||||||||||    
T  25136814 taaaaagtcatccaaaccaaaccaa 25136838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 736 - 844
Target Start/End: Original strand, 33550277 - 33550386
Alignment:
Q  736 tgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaaaagtcatcaaa 834  Q
    ||||||||| || ||||||||||||||||||||||||| ||| | ||||||||| ||||  |||| ||||| || |||||||||||||||||||||| ||    
T  33550277 tgcggtttgattcggttttgagcataaaagtcatccaaaccgagggataaaaaaacatgatgtttagtttggttcggttgatttttaaaaagtcatccaa 33550376  T
Q  835 accaaaccaa 844  Q
    ||||||||||    
T  33550377 accaaaccaa 33550386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 721 - 806
Target Start/End: Original strand, 20500507 - 20500593
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtca-tccaaccgcgagataaaaaagcatgcagtttggtttga 806  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||| || |||||| ||||||||||||| | ||||||||||||    
T  20500507 taggggtgttcgcggtgcggtttggtttggttttgagggtaaaagtcactcgaaccgcaagataaaaaagcaagtagtttggtttga 20500593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 722 - 865
Target Start/End: Complemental strand, 24645091 - 24644948
Alignment:
Q  722 aggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgattttt 820  Q
    |||||||||||  ||||||||||||| | |||||||  |||||||||||| |||||| ||||||| ||| |||| ||||||||||| || ||||| ||||    
T  24645091 aggggtgttcgttgtgcggtttggttcgattttgaggttaaaagtcatccgaaccgcaagataaataagtatgcggtttggtttga-ttcgttgactttt 24644993  T
Q  821 aaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggt 865  Q
    ||||    ||| ||||||||||||||| ||||| ||||| |||||    
T  24644992 aaaataaaatccaaaccaaaccaatgcagtttggattggatcggt 24644948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 776 - 844
Target Start/End: Complemental strand, 13802066 - 13801998
Alignment:
Q  776 gcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaaaagtcatcaaaaccaaaccaa 844  Q
    ||||||||||||||||| | |||||||||| ||  ||||||||||||||||||||| ||||||||||||    
T  13802066 gcgagataaaaaagcatacggtttggtttggttcagttgatttttaaaaagtcatccaaaccaaaccaa 13801998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 721 - 824
Target Start/End: Original strand, 22413780 - 22413884
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||||| ||||| ||||| ||||||||||||  |||||||||||| ||||   ||||||| ||| |||| |||||||||| || |||||| |||    
T  22413780 taggggtgttcgaggtgcagtttgatttggttttgaggttaaaagtcatccgaaccagaagataaataagtatgcggtttggtttggttcggttgacttt 22413879  T
Q  820 taaaa 824  Q
    |||||    
T  22413880 taaaa 22413884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 721 - 859
Target Start/End: Original strand, 9686000 - 9686139
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatc-caaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||||||| ||| |||||||| | |||||||  | |||||||||  |||||| ||||||| ||| |||| |||||||||| || |||| | |||    
T  9686000 taggggtgttcgcgatgcagtttggttcgattttgaggctcaaagtcatctgaaccgcaagataaataagtatgcggtttggtttggttcggttaacttt 9686099  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattgg 859  Q
    |||||    |||  |||||||||||||||||||| |||||    
T  9686100 taaaataaaatccgaaccaaaccaatgcggtttggattgg 9686139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 721 - 861
Target Start/End: Original strand, 6266846 - 6266987
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||| |||||||||||||||||||||  |||||||||  ||| |||||||| |||||  | |||||||| ||||| |||||||||| |  |||||| |||    
T  6266846 taggagtgttcgcggtgcggtttggtacggttttgaggttaatagtcatccgaaccgtaaaataaaaaaacatgcggtttggtttggtacggttgacttt 6266945  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggtt 861  Q
    ||||| |  | | ||||||||| |||| | |||| |||||||    
T  6266946 taaaatgaaaaccaaaccaaacaaatgtgttttggattggtt 6266987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 725 - 824
Target Start/End: Complemental strand, 892477 - 892377
Alignment:
Q  725 ggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaa 823  Q
    |||||||||||||||||||||||   |||| ||  |||||||||||| |||||| | |||||||| ||||| |||||||||| || |||| | |||||||    
T  892477 ggtgttcgcggtgcggtttggttcaattttaaggctaaaagtcatccgaaccgcaaaataaaaaaacatgcggtttggtttggttcggttaacttttaaa 892378  T
Q  824 a 824  Q
    |    
T  892377 a 892377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 721 - 784
Target Start/End: Original strand, 8135378 - 8135442
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataa 784  Q
    ||||||||||||||||||| ||||||| |||||||||  |||||||||||| |||||| ||||||    
T  8135378 taggggtgttcgcggtgcgttttggttcggttttgaggctaaaagtcatccgaaccgcaagataa 8135442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 746 - 823
Target Start/End: Original strand, 30752498 - 30752576
Alignment:
Q  746 tttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaa 823  Q
    ||||||||||||   ||||||||||  |||||| |||||||||||||||| |||||||||| || |||||| |||||||    
T  30752498 tttggttttgagatgaaaagtcatctgaaccgcaagataaaaaagcatgcggtttggtttggttcggttgacttttaaa 30752576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 721 - 773
Target Start/End: Original strand, 29048069 - 29048121
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa 773  Q
    ||||| ||||||||||||||||||||| |||||| ||  ||||||||||||||    
T  29048069 tagggatgttcgcggtgcggtttggttcggttttaaggttaaaagtcatccaa 29048121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 724 - 803
Target Start/End: Complemental strand, 31945561 - 31945481
Alignment:
Q  724 gggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtt 803  Q
    |||||||||||||| |||||| || |||||||||  |||||||||||| |||||  ||||||||||| ||||  |||||||    
T  31945561 gggtgttcgcggtgtggtttgtttcggttttgaggttaaaagtcatccgaaccgtaagataaaaaagtatgcgttttggtt 31945481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 772 - 853
Target Start/End: Complemental strand, 14940660 - 14940579
Alignment:
Q  772 aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaaaagtcatcaaaaccaaaccaatgcggtttg 853  Q
    |||||| |||||||||| |||||||||||||||| || |||||| |||| |||    |||  ||||||||||| ||||||||    
T  14940660 aaccgcaagataaaaaaacatgcagtttggtttggttcggttgactttttaaataaaatccgaaccaaaccaacgcggtttg 14940579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 725 - 805
Target Start/End: Complemental strand, 26645520 - 26645439
Alignment:
Q  725 ggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttg 805  Q
    ||||||| ||||| ||||| |||||||||||||  |||||||||||| |||||  || |||||||  |||| ||||||||||    
T  26645520 ggtgttcacggtgaggtttagtttggttttgaggttaaaagtcatccgaaccgtaaggtaaaaaaatatgcggtttggtttg 26645439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 725 - 805
Target Start/End: Complemental strand, 26751486 - 26751405
Alignment:
Q  725 ggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttg 805  Q
    ||||||| ||||| ||||| |||||||||||||  |||||||||||| |||||  || |||||||  |||| ||||||||||    
T  26751486 ggtgttcacggtgaggtttagtttggttttgaggttaaaagtcatccgaaccgtaaggtaaaaaaatatgcggtttggtttg 26751405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 4e-53; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 721 - 870
Target Start/End: Complemental strand, 51252555 - 51252405
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||  |||||||||| || ||||||||||    
T  51252555 taggggtgttcgcggtgcggtttggttcgattttgagcataaaagtcatccaaaccgcgagataaaaaagcatgtggtttggtttggttgggttgatttt 51252456  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    |||||||||||| |||||||| |||||||| ||||||||||||||||||||    
T  51252455 taaaaagtcatccaaaccaaatcaatgcggcttgaattggttcggtttgtg 51252405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 724 - 870
Target Start/End: Complemental strand, 1161879 - 1161732
Alignment:
Q  724 gggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaa 822  Q
    ||||||| ||| |||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||  |||||||||| ||||||||||||||||    
T  1161879 gggtgtttgcgatgcggtttggttcggttttgagcagaaaagtcatccgaaccgcgagataaaaaagcatgtggtttggtttggtttggttgatttttaa 1161780  T
Q  823 aaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    ||||||||| ||||||||||||||| | ||  ||||||||||||||||    
T  1161779 aaagtcatccaaaccaaaccaatgcagcttcgattggttcggtttgtg 1161732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 721 - 870
Target Start/End: Complemental strand, 16529640 - 16529480
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaacc-gcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||| || ||||||||||    
T  16529640 taggggtgttcgcggtgcggtttggttcggttttgagcataaaagtcatccaaactgcgagataaaaaagcatgccgtttggtttggttcggttgatttt 16529541  T
Q  820 taaaaagtcat----------caaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    |||||||||||          | ||||||||||||||||| ||||||||||||||||||||    
T  16529540 taaaaagtcattcaaaccaaaccaaaccaaaccaatgcggcttgaattggttcggtttgtg 16529480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 722 - 844
Target Start/End: Original strand, 32953982 - 32954104
Alignment:
Q  722 aggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaaccgcgagataaaaaagcatgcagtttggtttgatttggttgattttta 821  Q
    ||||||||||| |||||||||||||| |||||||| |||||||||||||||| |  ||||||||||||||||| |||||||||| || ||||||||||||    
T  32953982 aggggtgttcgtggtgcggtttggttcggttttgaacataaaagtcatccaaacctgagataaaaaagcatgcggtttggtttggttcggttgattttta 32954081  T
Q  822 aaaagtcatcaaaaccaaaccaa 844  Q
    |||||||||| ||||||||||||    
T  32954082 aaaagtcatccaaaccaaaccaa 32954104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 721 - 844
Target Start/End: Original strand, 8211221 - 8211345
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||||||||||||||||||||||||||  ||||||| | |||||||| |||||||| |||||||||||| |||||||||| || ||||||||||    
T  8211221 taggggtgttcgcggtgcggtttggtttggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 8211320  T
Q  820 taaaaagtcatcaaaaccaaaccaa 844  Q
    |||||||||||| ||||||||||||    
T  8211321 taaaaagtcatccaaaccaaaccaa 8211345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 721 - 870
Target Start/End: Original strand, 33474390 - 33474540
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaacc-gcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||||| |||||  ||||||| | ||||||||| |||| |||||||| | | ||||||||||||||||| |||| ||||| || ||||||||||    
T  33474390 taggggtgttcgtggtgctatttggttcgattttgagcaaaaaaatcatccaaactgtgagataaaaaagcatgcggtttagtttggttcggttgatttt 33474489  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
     ||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  33474490 aaaaaagtcatccaaaccaaaccaatgcggtttggattggttcggtttgtg 33474540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 720 - 844
Target Start/End: Complemental strand, 5155484 - 5155359
Alignment:
Q  720 ataggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgattt 818  Q
    ||||||||||||||||||||||||||||||||||  ||||||| | |||||||| |||||||| ||||||||||||  ||||||||| || |||||||||    
T  5155484 ataggggtgttcgcggtgcggtttggtttggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcgatttggtttggttcggttgattt 5155385  T
Q  819 ttaaaaagtcatcaaaaccaaaccaa 844  Q
    ||||||||||||| ||||||||||||    
T  5155384 ttaaaaagtcatccaaaccaaaccaa 5155359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 732 - 867
Target Start/End: Original strand, 29388986 - 29389127
Alignment:
Q  732 gcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaaaagtcat 830  Q
    |||||||||||||||| | ||||||||| ||||||||||||| ||| ||||||||||||||||| ||||| |||| |||| |||||||||||||||||||    
T  29388986 gcggtgcggtttggttcgattttgagcaaaaaagtcatccaaaccgtgagataaaaaagcatgcggtttgatttggtttgattgatttttaaaaagtcat 29389085  T
Q  831 caaaaccaaac-----caatgcggtttgaattggttcggttt 867  Q
    | |||||||||     |||||||||||| |||||||||||||    
T  29389086 ccaaaccaaaccaaatcaatgcggtttggattggttcggttt 29389127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 720 - 844
Target Start/End: Complemental strand, 39256777 - 39256652
Alignment:
Q  720 ataggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgattt 818  Q
    ||||||||||||| ||||||||||||||  |||||||||| ||||||||| | ||| ||||||||||||||||||| |||| ||||| || |||||||||    
T  39256777 ataggggtgttcgtggtgcggtttggttctgttttgagcacaaaagtcattcgaactgcgagataaaaaagcatgcggtttagtttggttcggttgattt 39256678  T
Q  819 ttaaaaagtcatcaaaaccaaaccaa 844  Q
    ||||||||||||| ||||||||||||    
T  39256677 ttaaaaagtcatccaaaccaaaccaa 39256652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 721 - 844
Target Start/End: Original strand, 20493691 - 20493815
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| |||||  ||||||| | |||||||| |||||||| |||||| ||||| |||||||||| || ||||||||||    
T  20493691 taggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaaacatgcggtttggtttggttcggttgatttt 20493790  T
Q  820 taaaaagtcatcaaaaccaaaccaa 844  Q
    |||||||||||| ||||||||||||    
T  20493791 taaaaagtcatccaaaccaaaccaa 20493815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 721 - 866
Target Start/End: Complemental strand, 42789743 - 42789602
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtca-tccaaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||  | |||| ||||||||||||| || ||||||||||||||||||||||||||||||     ||  |||||||||    
T  42789743 taggggtgttcgcggtgcggtttggtacgattttaagcataaaagtcattcaaaccgcgagataaaaaagcatgcagtttgg-----ttcagttgatttt 42789649  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtt 866  Q
    |||||||||||| |||||||| |||||||| ||| || |||||||||    
T  42789648 taaaaagtcatccaaaccaaatcaatgcggcttggatcggttcggtt 42789602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 721 - 870
Target Start/End: Original strand, 45691739 - 45691895
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaag-catgcagtttggtttgatttggttgattt 818  Q
    |||||| ||| ||||||||||||| ||  |||||||||| ||| ||||||||| |||||| ||||||||  ||||| |||||||||| || |||||||||    
T  45691739 taggggcgtttgcggtgcggtttgattcagttttgagcaaaaatgtcatccaaaccgcgaaataaaaaaaacatgcggtttggtttggttcggttgattt 45691838  T
Q  819 ttaaaaagtcat-----caaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    ||||||||||||     | ||||||||| ||||||||||| ||||||||||||||||    
T  45691839 ttaaaaagtcatccaaactaaaccaaactaatgcggtttggattggttcggtttgtg 45691895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 721 - 844
Target Start/End: Complemental strand, 33910922 - 33910797
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||| ||||| |||||||||||||  | |||||||||||||||||||| ||  ||||||||||||||||||  ||||| |||| || ||||||||||    
T  33910922 taggggtattcgcagtgcggtttggttcaggtttgagcataaaagtcatccaaaatgcgagataaaaaagcatgtggtttgatttggttcggttgatttt 33910823  T
Q  820 taaaaagtcat-caaaaccaaaccaa 844  Q
    |||||| |||| ||||||||||||||    
T  33910822 taaaaattcatccaaaaccaaaccaa 33910797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 721 - 824
Target Start/End: Complemental strand, 36203583 - 36203479
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||| ||||||| |||||||||  |||||||||||| |||||| |||||||||||||||| ||||| |||| || |||||| |||    
T  36203583 taggggtgttcgcggtgcgatttggttcggttttgaggttaaaagtcatccaaaccgcaagataaaaaagcatgcggtttgatttggttcggttgacttt 36203484  T
Q  820 taaaa 824  Q
    |||||    
T  36203483 taaaa 36203479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 726 - 844
Target Start/End: Original strand, 11898958 - 11899072
Alignment:
Q  726 gtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaaa 824  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||| ||||||| ||||||||| ||||     ||||||| || |||||||||||||||    
T  11898958 gtgttcgcggtgcggtttgattcggttttgagcaaaaaagtcatccaaaccgcgcgataaaaaaacatg-----tggtttggttcggttgatttttaaaa 11899052  T
Q  825 agtcatcaaaaccaaaccaa 844  Q
    | ||||| ||||||||||||    
T  11899053 aatcatccaaaccaaaccaa 11899072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 734 - 870
Target Start/End: Original strand, 44918503 - 44918640
Alignment:
Q  734 ggtgcggtttggtttggttttgagcataaaagtcatccaacc-gcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaaaagtcat-- 830  Q
    |||||||||||||| | |||||||||||||||||| |||| | || |||||||||||||||| |||||||| |     ||||||||||||||||||||      
T  44918503 ggtgcggtttggttcgattttgagcataaaagtcacccaaactgcaagataaaaaagcatgcggtttggttcg-----gttgatttttaaaaagtcatcc 44918597  T
Q  831 ---caaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
       | ||||||||||||| ||||||| ||||||||||||||||    
T  44918598 aaacgaaaccaaaccaatacggtttggattggttcggtttgtg 44918640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 724 - 824
Target Start/End: Complemental strand, 27507628 - 27507527
Alignment:
Q  724 gggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaa 822  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||| |||||| ||||||| ||| ||||| ||||||||  || |||||| ||||||    
T  27507628 gggtgttcgcggtgcggtttggttcggttttgagaataaaagtcatccgaaccgcaagataaataagtatgcaatttggtttagttcggttgacttttaa 27507529  T
Q  823 aa 824  Q
    ||    
T  27507528 aa 27507527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 721 - 824
Target Start/End: Original strand, 12973502 - 12973606
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| ||||||||   | |||||||||| |||||| ||||||| ||  |||| |||||||||| |||||||||||||    
T  12973502 taggggtgttcgcggtgcggtttggttcggttttgaagctgaaagtcatccgaaccgcaagataaataaatatgcggtttggtttggtttggttgatttt 12973601  T
Q  820 taaaa 824  Q
     ||||    
T  12973602 gaaaa 12973606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 725 - 866
Target Start/End: Original strand, 34914080 - 34914222
Alignment:
Q  725 ggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaacc-gcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaa 823  Q
    |||||||| ||||| |||||||| | |||||||   ||||||||||||| | |||| ||||||||| ||||||||||||||| ||||||||| |||||||    
T  34914080 ggtgttcgtggtgcagtttggttcgattttgaggtgaaaagtcatccaaactgcgaaataaaaaagtatgcagtttggtttgctttggttgacttttaaa 34914179  T
Q  824 aagtcatcaaaaccaaaccaatgcggtttgaattggttcggtt 866  Q
    |    ||   ||||||||||||| |||||| ||||| ||||||    
T  34914180 ataaaattcgaaccaaaccaatgtggtttggattggatcggtt 34914222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 721 - 853
Target Start/End: Complemental strand, 35980527 - 35980399
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||| |||||||||||||||| |||||||||  |||||||||||| |||||| || ||||||||||||  |||||||||  || | |||| |||    
T  35980527 taggggtgtttgcggtgcggtttggttcggttttgaggctaaaagtcatccgaaccgcaaggtaaaaaagcatgtggtttggttttgttcgattgacttt 35980428  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttg 853  Q
    ||||     || ||| ||||||||||||||||||    
T  35980427 taaa-----ataaaatccaaaccaatgcggtttg 35980399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 721 - 824
Target Start/End: Complemental strand, 40095561 - 40095457
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| |||||||||  ||||||| |||| |||||| ||||||| ||  |||| |||||| ||| || |||| |||||    
T  40095561 taggggtgttcgcggtgcggtttggttcggttttgaggttaaaagttatccgaaccgcaagataaataaatatgcggtttggcttgtttcggtttatttt 40095462  T
Q  820 taaaa 824  Q
    |||||    
T  40095461 taaaa 40095457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 721 - 813
Target Start/End: Original strand, 6248019 - 6248112
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggtt 813  Q
    ||||||||||||| |||||||||| |||| |||||||  |||||||||||| |||||| ||| ||| ||| |||| |||||||||| |||||||    
T  6248019 taggggtgttcgcagtgcggtttgatttgattttgagactaaaagtcatccaaaccgcaagaaaaataagtatgcggtttggtttggtttggtt 6248112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 724 - 824
Target Start/End: Complemental strand, 32910506 - 32910405
Alignment:
Q  724 gggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaacc-gcgagataaaaaagcatgcagtttggtttgatttggttgatttttaa 822  Q
    ||||||| |||||| |  |||||| ||||||||| ||||||||||||||| | || |||||||||| |||||||||||||||| || |||||| ||| ||    
T  32910506 gggtgtttgcggtgtgtgttggttcggttttgaggataaaagtcatccaaactgcaagataaaaaaacatgcagtttggtttggttcggttgactttaaa 32910407  T
Q  823 aa 824  Q
    ||    
T  32910406 aa 32910405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 722 - 823
Target Start/End: Original strand, 8268600 - 8268703
Alignment:
Q  722 aggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatc-caaccgcgagataaa-aaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||| ||||||||||||||||| |||||||||  |||||||||||  |||||| ||||||| |||  |||| | |||||||| ||||||||| |||    
T  8268600 aggggtgtacgcggtgcggtttggttcggttttgaggctaaaagtcatctgaaccgcaagataaacaaaatatgcgggttggtttggtttggttgacttt 8268699  T
Q  820 taaa 823  Q
    ||||    
T  8268700 taaa 8268703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 726 - 820
Target Start/End: Complemental strand, 9962282 - 9962187
Alignment:
Q  726 gtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgattttt 820  Q
    ||||||||||||||||||||||  |||||||   |||||||||||| || ||| |||||||||| || || |||| ||||||||||||||| ||||    
T  9962282 gtgttcgcggtgcggtttggttcagttttgaaactaaaagtcatccgaatcgcaagataaaaaaacaggcggttttgtttgatttggttgactttt 9962187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 723 - 824
Target Start/End: Original strand, 3935401 - 3935503
Alignment:
Q  723 ggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcat-ccaaccgcgagataaaaaagcatgcagtttggtttgatttggttgattttta 821  Q
    |||||||| |||||||||||||||| | |||||||  ||||||||||   |||||  ||||||| ||| ||||||| |||||||||| |||||| |||||    
T  3935401 ggggtgtttgcggtgcggtttggttcgattttgagactaaaagtcatatgaaccgtaagataaataagtatgcagtatggtttgattcggttgactttta 3935500  T
Q  822 aaa 824  Q
    |||    
T  3935501 aaa 3935503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 721 - 824
Target Start/End: Complemental strand, 21685682 - 21685578
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatc-caaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||| ||||||| |||||||| |||||| ||  |||||||||||  |||||| ||||| ||| |||||| |||||||||| ||  ||||| |||    
T  21685682 taggggtgtttgcggtgcagtttggttcggttttaaggctaaaagtcatctgaaccgcaagatacaaatgcatgcggtttggtttggttcagttgacttt 21685583  T
Q  820 taaaa 824  Q
    |||||    
T  21685582 taaaa 21685578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 721 - 801
Target Start/End: Complemental strand, 25560136 - 25560055
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtca-tccaaccgcgagataaaaaagcatgcagtttgg 801  Q
    ||||||||||||||||||| ||||||| | |||||||  ||||||||| || |||||  ||||||||||| |||| ||||||    
T  25560136 taggggtgttcgcggtgcgttttggttcgattttgaggttaaaagtcattcgaaccgtaagataaaaaagtatgcggtttgg 25560055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 721 - 824
Target Start/End: Complemental strand, 26345198 - 26345094
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||| ||||||||||||||| |||  ||||||||  || ||||||||| ||||   | ||||||||| |||| |||| |||||||| |||||| |||    
T  26345198 taggggtattcgcggtgcggtttagttccgttttgaggttagaagtcatccgaaccaaaaaataaaaaagtatgcggtttagtttgattcggttgacttt 26345099  T
Q  820 taaaa 824  Q
    |||||    
T  26345098 taaaa 26345094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 724 - 770
Target Start/End: Original strand, 17988993 - 17989039
Alignment:
Q  724 gggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatc 770  Q
    |||||||| ||||||||||||||| |||||||||  |||||||||||    
T  17988993 gggtgttcacggtgcggtttggttcggttttgaggctaaaagtcatc 17989039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 732 - 805
Target Start/End: Original strand, 24629901 - 24629975
Alignment:
Q  732 gcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttg 805  Q
    |||||||||||||| |||||||||||  ||||||||| || || |||  ||||||||||||||  ||||||||||    
T  24629901 gcggtgcggtttgggttggttttgagactaaaagtcagccaaatcgcatgataaaaaagcatgtggtttggtttg 24629975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 725 - 866
Target Start/End: Original strand, 52828769 - 52828910
Alignment:
Q  725 ggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatc-caaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaa 823  Q
    ||||||||||||  ||||||||| |||||| ||  |||| ||||||  |||||| |||||| ||||||||| ||||||||||  | |||||| |||||||    
T  52828769 ggtgttcgcggtttggtttggttcggttttaaggttaaaggtcatctgaaccgcaagataacaaagcatgctgtttggtttg-gtcggttgacttttaaa 52828867  T
Q  824 aagtcatcaaaaccaaaccaatgcggtttgaattggttcggtt 866  Q
    |    |||  ||||||||||| ||| ||||| |||| ||||||    
T  52828868 ataaaatctgaaccaaaccaacgcgatttgagttggatcggtt 52828910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 833 - 870
Target Start/End: Complemental strand, 24911076 - 24911039
Alignment:
Q  833 aaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  24911076 aaaccaaaccaatgcagtttggattggttcggtttgtg 24911039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 833 - 870
Target Start/End: Original strand, 32954108 - 32954145
Alignment:
Q  833 aaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  32954108 aaaccaaaccaatgcggcttggattggttcggtttgtg 32954145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 760 - 824
Target Start/End: Complemental strand, 35980369 - 35980304
Alignment:
Q  760 taaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaaa 824  Q
    |||||||||||| |||||| || ||||||||||||  |||||||||  ||||||||| ||||||||    
T  35980369 taaaagtcatccgaaccgcaaggtaaaaaagcatgtggtttggttttgtttggttgacttttaaaa 35980304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 9e-51; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 721 - 870
Target Start/End: Complemental strand, 6004527 - 6004377
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||| ||| |||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||| || ||||||||||    
T  6004527 taggggtgtttgcgatgcggtttggttcggttttcagcataaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggttcggttgatttt 6004428  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    |||||||||||| ||||||||||||||||||||| |||| |||||||||||    
T  6004427 taaaaagtcatccaaaccaaaccaatgcggtttggattgattcggtttgtg 6004377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 723 - 870
Target Start/End: Complemental strand, 21586981 - 21586833
Alignment:
Q  723 ggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgattttta 821  Q
    ||||||||| |||||| |||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||    
T  21586981 ggggtgttcacggtgcagtttggttcggttttgagcttaaaagtcatccaaaccgcgagataaaaaagcatgcagtttggtttgattcagttgattttta 21586882  T
Q  822 aaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    |||||||||| ||||||||||||||| | ||| ||||||||||||||||    
T  21586881 aaaagtcatccaaaccaaaccaatgcagcttggattggttcggtttgtg 21586833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 721 - 870
Target Start/End: Original strand, 32880243 - 32880393
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||| ||||| |||||||||||||||| || |||||||||||||||| ||||| ||||||||||||||||||||  ||||| |||| || ||||||||||    
T  32880243 taggagtgtttgcggtgcggtttggttcggctttgagcataaaagtcctccaaaccgcgagataaaaaagcatgtggtttgatttggttcggttgatttt 32880342  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    |||||||||||  ||||||||||||| ||||||||||||||||||||||||    
T  32880343 taaaaagtcatacaaaccaaaccaatacggtttgaattggttcggtttgtg 32880393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 721 - 862
Target Start/End: Original strand, 34794537 - 34794679
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| |||||  ||||||| | |||||||| |||||||| ||||||||||||  ||||||||| || ||||||||||    
T  34794537 taggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcgatttggtttggttcggttgatttt 34794636  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttc 862  Q
    |||||||||||| ||||||||||||||||||||| ||||||||    
T  34794637 taaaaagtcatccaaaccaaaccaatgcggtttggattggttc 34794679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 721 - 862
Target Start/End: Complemental strand, 51149797 - 51149655
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| |||||  ||||||| | |||||||| |||||||| |||||||||||| |||||||||| || ||||||||||    
T  51149797 taggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 51149698  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttc 862  Q
    |||||||| ||| ||||||||||||||||||||| ||||||||    
T  51149697 taaaaagtgatccaaaccaaaccaatgcggtttggattggttc 51149655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 721 - 844
Target Start/End: Original strand, 43030359 - 43030483
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||| | || ||| ||||||||||| ||||||||||||||| || ||||||||||    
T  43030359 taggggtgttcgcggtgcggtttgatttagttttgagcataaaagtcatgcgaatcgcaagataaaaaagtatgcagtttggtttggttcggttgatttt 43030458  T
Q  820 taaaaagtcatcaaaaccaaaccaa 844  Q
    |||||||||||| |||| |||||||    
T  43030459 taaaaagtcatccaaactaaaccaa 43030483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 721 - 862
Target Start/End: Complemental strand, 9827918 - 9827776
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||||||||||||| |||||| |||||| |||||||||||||||| |||| ||||||||  ||||||||   ||| |||| || ||||||||||    
T  9827918 taggggtgttcgcggtgcggcttggttcggttttaagcataaaagtcatccaaaccacgagataattaagcatgcgacttgatttggttaggttgatttt 9827819  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttc 862  Q
    |||||||||||| ||||||||||||| ||| ||| ||||||||    
T  9827818 taaaaagtcatccaaaccaaaccaatacggcttggattggttc 9827776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 721 - 870
Target Start/End: Complemental strand, 50562710 - 50562560
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaaccg-cgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||| |||||||||||||||||| | |||| ||||||||||||||| || |  |||||||||||||||||  |||||||||| || ||||||||||    
T  50562710 taggggtgatcgcggtgcggtttggttcgattttaagcataaaagtcatctaaactacgagataaaaaagcatgtggtttggtttggttcggttgatttt 50562611  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    |||||| |||||  || ||||||||| ||| ||| ||||||||||||||||    
T  50562610 taaaaattcatcccaatcaaaccaattcggcttggattggttcggtttgtg 50562560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 721 - 844
Target Start/End: Complemental strand, 35402345 - 35402221
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaac-cgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| |||||  ||||||| | ||||||||  ||||||| |||||| ||||| |||||||||| || ||||||||||    
T  35402345 taggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaatcgcgagagaaaaaaacatgcggtttggtttggttcggttgatttt 35402246  T
Q  820 taaaaagtcatcaaaaccaaaccaa 844  Q
    |||||||||||| ||||||||||||    
T  35402245 taaaaagtcatccaaaccaaaccaa 35402221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 721 - 844
Target Start/End: Complemental strand, 4669787 - 4669663
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||| ||||| |||||||||||||||| |||||  ||||||| | |||||||| |||||||| |||||||||||| |||||||||| || ||||||||||    
T  4669787 taggagtgtttgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 4669688  T
Q  820 taaaaagtcatcaaaaccaaaccaa 844  Q
    ||||||||||||  |||||||||||    
T  4669687 taaaaagtcatccgaaccaaaccaa 4669663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 721 - 844
Target Start/End: Original strand, 10369154 - 10369278
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaacc-gcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| |||||  ||||||| | |||||||| | |||||| |||||| ||||| |||||||| | || | ||||||||    
T  10369154 taggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaactgcgagagaaaaaaacatgcggtttggttcggttcgtttgatttt 10369253  T
Q  820 taaaaagtcatcaaaaccaaaccaa 844  Q
    |||||||||||| ||||||||||||    
T  10369254 taaaaagtcatccaaaccaaaccaa 10369278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 777 - 870
Target Start/End: Complemental strand, 48032931 - 48032839
Alignment:
Q  777 cgagataaaaaagcatgcagtttggtttgatttggttgatttttaaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    |||||||||||||||||| |||||||| | || |||||||||||||||| ||||| ||||||||||||||||||||| |||||||| |||||||    
T  48032931 cgagataaaaaagcatgcggtttggttgg-ttcggttgatttttaaaaattcatccaaaccaaaccaatgcggtttggattggttcagtttgtg 48032839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 721 - 813
Target Start/End: Complemental strand, 2832539 - 2832446
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggtt 813  Q
    ||||| ||||||||||| |||||||||||||||||||  |||||||||||| |||| | |||||||||||||||| |||||||||| |||||||    
T  2832539 tagggttgttcgcggtgtggtttggtttggttttgaggctaaaagtcatccgaaccacaagataaaaaagcatgcggtttggtttggtttggtt 2832446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 721 - 866
Target Start/End: Complemental strand, 38652128 - 38651983
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||| ||||||||||||||||||||||||||||   |||||||||||| || ||| ||||||||||  |||| |||||||||| || |||||| |||    
T  38652128 taggggtattcgcggtgcggtttggtttggttttgaaggtaaaagtcatccgaatcgcaagataaaaaa-tatgcggtttggtttggttcggttgacttt 38652030  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtt 866  Q
     ||||    ||| ||||||||| |||||||||||  |||| ||||||    
T  38652029 aaaaataatatccaaaccaaactaatgcggtttgggttggatcggtt 38651983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 724 - 839
Target Start/End: Original strand, 39097891 - 39098010
Alignment:
Q  724 gggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaacc-----gcgagataaaaaagcatgcagtttggtttgatttggttgattt 818  Q
    |||||||||||||  ||||||||| | ||||||||||||||||||||||| |     ||||||||||||| ||||| ||||| |||| ||  ||||||||    
T  39097891 gggtgttcgcggtttggtttggttcgattttgagcataaaagtcatccaaactgcatgcgagataaaaaa-catgcggtttgatttggttcagttgattt 39097989  T
Q  819 ttaaaaagtcatcaaaaccaa 839  Q
    |||||||||| || |||||||    
T  39097990 ttaaaaagtcgtccaaaccaa 39098010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 721 - 824
Target Start/End: Complemental strand, 55467782 - 55467678
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||| ||||| |||||||||||||||| |||||||||  |||||||||||| ||| || ||||||| ||| |||| |||||||||| || |||||| |||    
T  55467782 taggtgtgtttgcggtgcggtttggttcggttttgaggctaaaagtcatccgaactgcaagataaataagtatgcggtttggtttggttcggttgacttt 55467683  T
Q  820 taaaa 824  Q
    |||||    
T  55467682 taaaa 55467678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 721 - 803
Target Start/End: Complemental strand, 35532276 - 35532193
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtt 803  Q
    ||||||| || || |||| |||||||| ||||||||||||||||||||||| ||  ||||||||||||||||||| ||||||||    
T  35532276 taggggtattagcagtgcagtttggttcggttttgagcataaaagtcatccaaattgcgagataaaaaagcatgcggtttggtt 35532193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 725 - 824
Target Start/End: Complemental strand, 17144865 - 17144766
Alignment:
Q  725 ggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaa 823  Q
    ||||||||| ||||||||||||| |||||||||  |||||||||||| |||||| |||| |||||| |||| | |||||||| || |||||| |||||||    
T  17144865 ggtgttcgcagtgcggtttggttcggttttgaggctaaaagtcatccaaaccgcaagat-aaaaagtatgcggattggtttggttcggttgacttttaaa 17144767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 729 - 824
Target Start/End: Original strand, 45629143 - 45629239
Alignment:
Q  729 ttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaaa 824  Q
    ||||||||  |||||| || |||||| ||  |||||||||||| |||||| ||||||| ||| ||||| ||||||||||||||||||| ||||||||    
T  45629143 ttcgcggtttggtttgattcggttttaaggttaaaagtcatccgaaccgcaagataaataagtatgcaatttggtttgatttggttgacttttaaaa 45629239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 722 - 824
Target Start/End: Complemental strand, 10481784 - 10481681
Alignment:
Q  722 aggggtgttcgcggtgcggtttggtttggttttgagcataaaagtca-tccaaccgcgagataaaaaagcatgcagtttggtttgatttggttgattttt 820  Q
    |||||||||| |||||| |||||||| ||||||||| |||||||||| |  |||| | |||||||||  || ||||||||||||| || |||||| ||||    
T  10481784 aggggtgttcacggtgcagtttggttcggttttgaggataaaagtcattggaaccacaagataaaaagacacgcagtttggtttggttcggttgactttt 10481685  T
Q  821 aaaa 824  Q
    ||||    
T  10481684 aaaa 10481681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 719 - 824
Target Start/End: Complemental strand, 42363367 - 42363261
Alignment:
Q  719 aataggggtgttcgcggtgcggtttggtttggttttgagcataaaagtca-tccaaccgcgagataaaaaagcatgcagtttggtttgatttggttgatt 817  Q
    |||| |||||||||| ||||||||||||| |||||||||  ||||||| | |  |||||| |||||||||| ||||| |||||||||| || |||||| |    
T  42363367 aatacgggtgttcgcagtgcggtttggttcggttttgagggtaaaagtaatttgaaccgcaagataaaaaatcatgcggtttggtttggttcggttgact 42363268  T
Q  818 tttaaaa 824  Q
    || ||||    
T  42363267 ttaaaaa 42363261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 721 - 824
Target Start/End: Complemental strand, 26292096 - 26291992
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| | |||| |   ||||| |||||| |||||| ||||||||||   ||| ||||| |||| || ||||||||||    
T  26292096 taggggtgttcgcggtgcggtttggttcgattttaaaattaaaaatcatccaaaccgcaagataaaaaattgtgcggtttgctttggttcggttgatttt 26291997  T
Q  820 taaaa 824  Q
    |||||    
T  26291996 taaaa 26291992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 796 - 844
Target Start/End: Original strand, 33360972 - 33361020
Alignment:
Q  796 gtttggtttgatttggttgatttttaaaaagtcatcaaaaccaaaccaa 844  Q
    |||||||||| || |||||||||||||||||||||| ||||||||||||    
T  33360972 gtttggtttggttcggttgatttttaaaaagtcatccaaaccaaaccaa 33361020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 721 - 800
Target Start/End: Original strand, 37044863 - 37044943
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttg 800  Q
    ||||||||||  ||||||||||||||| |||||||||   ||||||||||| |||||| |||||||||| ||||| |||||    
T  37044863 taggggtgtttacggtgcggtttggttcggttttgagagaaaaagtcatccaaaccgcaagataaaaaaacatgcggtttg 37044943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 725 - 824
Target Start/End: Original strand, 54121967 - 54122067
Alignment:
Q  725 ggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaa 823  Q
    |||||| ||||||| ||||| || | |||||||  |||||||||||| |||||  ||||||||||| |||| |||||||||| || |||||| |||||||    
T  54121967 ggtgtttgcggtgcagtttgattcgattttgaggttaaaagtcatccgaaccgtaagataaaaaagtatgcggtttggtttggttcggttgacttttaaa 54122066  T
Q  824 a 824  Q
    |    
T  54122067 a 54122067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 727 - 824
Target Start/End: Original strand, 20846418 - 20846518
Alignment:
Q  727 tgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaa--gcatgcagtttggtttgatttggttgatttttaaa 823  Q
    |||||||||||| |||||||| ||||| |||  |||||||||||| |||||| ||||||||||   |||||  ||||||||| || |||||| |||||||    
T  20846418 tgttcgcggtgcagtttggttcggtttcgagagtaaaagtcatccgaaccgcaagataaaaaaatacatgcgctttggtttggttcggttgacttttaaa 20846517  T
Q  824 a 824  Q
    |    
T  20846518 a 20846518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 833 - 870
Target Start/End: Original strand, 43030487 - 43030524
Alignment:
Q  833 aaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  43030487 aaaccaaaccaatgcagtttgaattggttcggtttgtg 43030524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 737 - 824
Target Start/End: Complemental strand, 8558082 - 8557994
Alignment:
Q  737 gcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaaa 824  Q
    |||||||||||||||||||||  ||||||||| || ||| || |||||||||||| ||| |||||||| | |||| |||| ||| ||||    
T  8558082 gcggtttggtttggttttgagggtaaaagtcacccgaactgcaagataaaaaagcttgcggtttggttcggtttgattgactttaaaaa 8557994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 721 - 752
Target Start/End: Original strand, 33360953 - 33360984
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggtt 752  Q
    ||||||||||||||||||||||||||||||||    
T  33360953 taggggtgttcgcggtgcggtttggtttggtt 33360984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 727 - 800
Target Start/End: Complemental strand, 22257633 - 22257559
Alignment:
Q  727 tgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttg 800  Q
    ||||| |||||| || ||||| |||||||||  |||||||||||| |||||||||||||| ||| |||| |||||    
T  22257633 tgttcacggtgctgtgtggttcggttttgagactaaaagtcatccgaaccgcgagataaataagtatgcggtttg 22257559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 3e-44; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 721 - 870
Target Start/End: Complemental strand, 40900223 - 40900068
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaacc-gcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||| ||  |||||||||    
T  40900223 taggggtgttcgcggtgcggtttggttcggttttgagcataaaagtcatccaaactgcgagataaaaaagcatgcggtttggtttggttcagttgatttt 40900124  T
Q  820 taaaaagtcatcaaaaccaaa-----ccaatgcggtttgaattggttcggtttgtg 870  Q
    |||||||||||| ||||||||     ||||||||||||| ||||||| ||||||||    
T  40900123 taaaaagtcatccaaaccaaaccaaaccaatgcggtttggattggtttggtttgtg 40900068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 721 - 870
Target Start/End: Original strand, 43630520 - 43630670
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||| |||||||||||||||||||||| | ||||||| ||||||||||||||| ||| |||||||||||  |||| |||||||||| |||||||||||||    
T  43630520 taggagtgttcgcggtgcggtttggttcgattttgagtataaaagtcatccaaaccgtgagataaaaaaatatgcggtttggtttggtttggttgatttt 43630619  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    |||||||||||| ||| ||||||||||||| ||| ||||||||||||||||    
T  43630620 taaaaagtcatccaaatcaaaccaatgcggcttggattggttcggtttgtg 43630670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 721 - 870
Target Start/End: Complemental strand, 40806958 - 40806803
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||| |||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||| || ||||||||||    
T  40806958 taggggtgtttgcggtgtggtttggttcggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgcgatttggtttggttcggttgatttt 40806859  T
Q  820 taaaaagtcatcaaaaccaaa-----ccaatgcggtttgaattggttcggtttgtg 870  Q
    |||||| ||||| ||||||||     ||||||| ||||| ||||||||||||||||    
T  40806858 taaaaaatcatccaaaccaaaccaaaccaatgcagtttggattggttcggtttgtg 40806803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 724 - 870
Target Start/End: Original strand, 52344683 - 52344825
Alignment:
Q  724 gggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaa 822  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||| ||||| ||||||||||||||||| |||||||| ||     || ||||||||    
T  52344683 gggtgttcgcggtgcggtttgggttgattttgagcataaaagtcatccaaaccgtgagataaaaaagcatgcggtttggttcga-----ttaatttttaa 52344777  T
Q  823 aaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    ||||||||| ||||||||||||||||| ||| ||||||||||||||||    
T  52344778 aaagtcatccaaaccaaaccaatgcggattggattggttcggtttgtg 52344825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 721 - 867
Target Start/End: Complemental strand, 30194116 - 30193968
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaa-gcatgcagtttggtttgatttggttgattt 818  Q
    |||||||||||||||||||||||| || || ||| || | ||||||||| ||| ||| ||||||||||| |||||| |||||||||| || |||||||||    
T  30194116 taggggtgttcgcggtgcggtttgattcgggtttaagtaaaaaagtcattcaaaccgtgagataaaaaaagcatgcggtttggtttggttcggttgattt 30194017  T
Q  819 ttaaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggttt 867  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  30194016 ttaaaaagtcatccaaaccaaaccaatgcggtttggattggttcggttt 30193968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 721 - 870
Target Start/End: Complemental strand, 23937658 - 23937508
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaaccg-cgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||| |||||| ||||||||||| ||| ||||||||||||||||||||| || |  ||||||||||||  |||| |||||||||| || ||||||||||    
T  23937658 tagggatgttcgtggtgcggtttgatttagttttgagcataaaagtcatctaaactacgagataaaaaaatatgcggtttggtttggttcggttgatttt 23937559  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    |||||||||||| ||||||||||||||| | ||| ||||||||||||||||    
T  23937558 taaaaagtcatccaaaccaaaccaatgcagcttggattggttcggtttgtg 23937508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 721 - 862
Target Start/End: Original strand, 36077515 - 36077657
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| |||||  ||||||| | |||| ||| |||||||| ||||||| |||| |||||||||| || ||||||||||    
T  36077515 taggggtgttcgcggtgcggtttggttcggtttcaagcataataatcattcaaaccgcgagagaaaaaagtatgcggtttggtttggttcggttgatttt 36077614  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttc 862  Q
    |||||||||||| ||||||||||||| ||||||| ||||||||    
T  36077615 taaaaagtcatccaaaccaaaccaatacggtttggattggttc 36077657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 721 - 844
Target Start/End: Complemental strand, 50571098 - 50570974
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| |||||  ||||||| | |||||||| |||||||| |||||||||||| |||||||||| || ||||||||||    
T  50571098 taggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 50570999  T
Q  820 taaaaagtcatcaaaaccaaaccaa 844  Q
    |||||||||||| ||||||||||||    
T  50570998 taaaaagtcatccaaaccaaaccaa 50570974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 724 - 866
Target Start/End: Complemental strand, 5262101 - 5261958
Alignment:
Q  724 gggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaa 822  Q
    ||||||||||| ||||||||| || ||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||  ||  ||||||||||||    
T  5262101 gggtgttcgcgatgcggtttgattcggttttgagcataaaagtcatccaaaccgcaagataaaaaagcatgcggtttggtttagttcagttgatttttaa 5262002  T
Q  823 aaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtt 866  Q
    ||||||||| |||||||||||||   | ||| ||||||||||||    
T  5262001 aaagtcatccaaaccaaaccaatttagcttggattggttcggtt 5261958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 721 - 870
Target Start/End: Original strand, 48996027 - 48996177
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||| ||| ||||||||| | |||| | ||||||| |||||||| |||||| |||||||||||||  |||||||||| || ||||||||||    
T  48996027 taggggtgttcgcagtgtggtttggttcgattttaatcataaaaatcatccaaaccgcgaaataaaaaagcatgtggtttggtttggttcggttgatttt 48996126  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    |||||||| ||| ||||||||||||||||| ||| ||||||||| ||||||    
T  48996127 taaaaagttatccaaaccaaaccaatgcggcttggattggttcgatttgtg 48996177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 721 - 870
Target Start/End: Original strand, 6333259 - 6333414
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| | ||||||||| ||||||||||| |||||||||||||||||||||||     |||||| |||||||||||||    
T  6333259 taggggtgttcgcggtgcggtttggttcgattttgagcaaaaaagtcatccaaaccgcgagataaaaaagcatgc-----ggtttggtttggttgatttt 6333353  T
Q  820 taaaaagtcat----------caaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    |||||||||||          | ||||||||||||||||||||| ||||||||||||||||    
T  6333354 taaaaagtcatccaaatcaaaccaaaccaaaccaatgcggtttggattggttcggtttgtg 6333414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 721 - 844
Target Start/End: Original strand, 29636716 - 29636840
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| |||||  ||||||| | |||||||| |||||||| |||||||||||| |||||||||| || ||||||||||    
T  29636716 taggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 29636815  T
Q  820 taaaaagtcatcaaaaccaaaccaa 844  Q
    ||||||| |||| ||||||||||||    
T  29636816 taaaaagccatccaaaccaaaccaa 29636840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 721 - 844
Target Start/End: Complemental strand, 29644265 - 29644141
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| |||||  | ||||| | |||||||| |||||||| |||||||||||| |||||||||| || ||||||||||    
T  29644265 taggggtgttcgcggtgcggtttggttcggtttcaaacataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 29644166  T
Q  820 taaaaagtcatcaaaaccaaaccaa 844  Q
    |||||||||||| ||||||||||||    
T  29644165 taaaaagtcatccaaaccaaaccaa 29644141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 721 - 870
Target Start/End: Original strand, 32136635 - 32136790
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||| || ||||||||||||| |||||||| ||||||||||| |||| || ||||||||||||||||||  ||||||||| || | ||||||||    
T  32136635 taggggtgtttgcagtgcggtttggttcggttttgaacataaaagtcacccaaacctcgagataaaaaagcatgcgatttggtttggttcgattgatttt 32136734  T
Q  820 taaaaagtcat-----caaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    |||||| ||||     | ||||||||||||||||||||| ||||||||||||||||    
T  32136735 taaaaattcatccaaaccaaaccaaaccaatgcggtttggattggttcggtttgtg 32136790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 716 - 840
Target Start/End: Original strand, 42557662 - 42557787
Alignment:
Q  716 aagaataggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttg 814  Q
    |||| ||||||||||||||||||||||||||| |||||  ||||||| | |||| ||| |||||||| |||||||||||| |||||||||| || |||||    
T  42557662 aagattaggggtgttcgcggtgcggtttggttcggtttcaagcataataatcattcaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttg 42557761  T
Q  815 atttttaaaaagtcatcaaaaccaaa 840  Q
    ||||||||||||||||| ||||||||    
T  42557762 atttttaaaaagtcatccaaaccaaa 42557787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 721 - 869
Target Start/End: Original strand, 10218621 - 10218780
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||||||| || || | |||||||||||||||| |||||||||||||  |||||||||    
T  10218621 taggggtgtttgcggtgcgttttggttcggttttgagcataaaagtcatctaaacctcaagataaaaaagcatgcggtttggtttgattcagttgatttt 10218720  T
Q  820 taaaaagtcatcaaaac----------caaaccaatgcggtttgaattggttcggtttgt 869  Q
    || | ||||||| ||||          ||||||||||||||||| |||||||||||||||    
T  10218721 tatatagtcatccaaacaaaaccaaaccaaaccaatgcggtttggattggttcggtttgt 10218780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 714 - 836
Target Start/End: Complemental strand, 13690995 - 13690872
Alignment:
Q  714 ttaagaataggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggt 812  Q
    |||||| |||| ||||||| | |||||||||||| | |||| |||||||||||||||||| ||||||||||| ||| ||| ||||||| ||||||| |||    
T  13690995 ttaagattaggtgtgttcgtgatgcggtttggttcgattttaagcataaaagtcatccaaaccgcgagataataaaacatacagtttgatttgattcggt 13690896  T
Q  813 tgatttttaaaaagtcatcaaaac 836  Q
    ||||||||||||||||||| ||||    
T  13690895 tgatttttaaaaagtcatccaaac 13690872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 723 - 844
Target Start/End: Original strand, 51394663 - 51394780
Alignment:
Q  723 ggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgattttta 821  Q
    |||||||||||||||| ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||     ||||||||| ||||||||||||    
T  51394663 ggggtgttcgcggtgcagtttggttcagttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgc-----ggtttgattcggttgattttta 51394757  T
Q  822 aaaagtcatcaaaaccaaaccaa 844  Q
    ||||||| |   |||||||||||    
T  51394758 aaaagtctttccaaccaaaccaa 51394780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 722 - 871
Target Start/End: Complemental strand, 48293544 - 48293394
Alignment:
Q  722 aggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgattttt 820  Q
    ||||||||||||||||| |||||||| |||||||||  |||||||||||| |||||| || ||||||||||||| |||||||||| || |||||  ||||    
T  48293544 aggggtgttcgcggtgcagtttggttcggttttgaggttaaaagtcatccgaaccgcaaggtaaaaaagcatgcggtttggtttggttcggttgtctttt 48293445  T
Q  821 aaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtga 871  Q
    ||||    |||  ||||||||||||||||||||  |||| |||||| ||||    
T  48293444 aaaataaaatccgaaccaaaccaatgcggtttgggttggatcggttggtga 48293394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 721 - 805
Target Start/End: Original strand, 31301238 - 31301323
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttg 805  Q
    |||||||||| ||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||    
T  31301238 taggggtgtttgcggtgcagtttggtttagttttgagcataaaagtcatccaaaccgcgagataaaaaaacatgcggtttggtttg 31301323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 800 - 870
Target Start/End: Complemental strand, 8176657 - 8176587
Alignment:
Q  800 ggtttgatttggttgatttttaaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtttgtg 870  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||    
T  8176657 ggtttggtttggttgatttttaaaaagtcatctaaaccaaaccaatgcggcttggattggttcggtttgtg 8176587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 721 - 844
Target Start/End: Complemental strand, 23120397 - 23120273
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||||||||||||||||| || | ||||||   |||||||||||| |||||| |||||||||||||||| |||||||||| || | |||| |||    
T  23120397 taggggtgttcgcggtgcggtttgattcgattttgaaggtaaaagtcatccgaaccgcaagataaaaaagcatgcggtttggtttggttcgattgacttt 23120298  T
Q  820 taaaaagtcatcaaaaccaaaccaa 844  Q
     |||||  |||| ||||||||||||    
T  23120297 aaaaaaaacatccaaaccaaaccaa 23120273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 721 - 824
Target Start/End: Complemental strand, 36106560 - 36106455
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcag-tttggtttgatttggttgattt 818  Q
    ||||| ||||||||||||||||||||| |||||||||  |||||||||||| |||||| |||||||||| ||||| | ||||||||| || |||||| ||    
T  36106560 tagggatgttcgcggtgcggtttggttcggttttgaggttaaaagtcatccgaaccgcaagataaaaaaacatgcggttttggtttggttcggttgactt 36106461  T
Q  819 ttaaaa 824  Q
    ||||||    
T  36106460 ttaaaa 36106455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 720 - 866
Target Start/End: Original strand, 45983325 - 45983472
Alignment:
Q  720 ataggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgattt 818  Q
    ||||||||||| | ||||| |||||||| || |||||  |||||||| |||  |||||| |||||||||| ||||| ||||||||||||| |||||| ||    
T  45983325 ataggggtgtttgtggtgcagtttggttcggctttgaagataaaagttatctgaaccgcaagataaaaaatcatgcggtttggtttgattcggttgactt 45983424  T
Q  819 ttaaaaagtcatcaaaaccaaaccaatgcggtttgaattggttcggtt 866  Q
    | ||||   |||| ||||||||| |||||||||||  |||| ||||||    
T  45983425 taaaaataacatccaaaccaaactaatgcggtttgggttggatcggtt 45983472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 726 - 859
Target Start/End: Complemental strand, 23450119 - 23449985
Alignment:
Q  726 gtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaaa 824  Q
    ||||| ||||||| |||| ||| |||||||||  |||||||||||| ||| || ||||||| ||| |||| |||||||||| || |||| | ||||||||    
T  23450119 gtgtttgcggtgcagtttagttcggttttgaggttaaaagtcatccgaactgcaagataaataagtatgcggtttggtttggttcggttaacttttaaaa 23450020  T
Q  825 agtcatcaaaaccaaaccaatgcggtttgaattgg 859  Q
      | ||| | ||||||||||||||||||| |||||    
T  23450019 tataatccacaccaaaccaatgcggtttggattgg 23449985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 721 - 801
Target Start/End: Complemental strand, 32223459 - 32223378
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttgg 801  Q
    |||||||||||||||||||||||| || |||||||||  |||||||||||| || ||  |||||||||||||||| ||||||    
T  32223459 taggggtgttcgcggtgcggtttgattcggttttgaggttaaaagtcatccaaatcgaaagataaaaaagcatgcggtttgg 32223378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 721 - 824
Target Start/End: Complemental strand, 5122524 - 5122420
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcat-ccaaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||| |||||||||||||||| |||||||||  ||||||||||   |||| | |||||||||||||||| ||||| |||| || |||||| |||    
T  5122524 taggggtgtttgcggtgcggtttggttcggttttgagggtaaaagtcatataaaccacaagataaaaaagcatgcggtttgatttggttcggttgacttt 5122425  T
Q  820 taaaa 824  Q
     ||||    
T  5122424 aaaaa 5122420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 722 - 864
Target Start/End: Original strand, 48338285 - 48338432
Alignment:
Q  722 aggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgattttt 820  Q
    |||||| || ||||||| |||||||| |||||| ||  |||||||||||| |||||  |||||||||| |||||||||||||||| || |||||| ||||    
T  48338285 aggggtatttgcggtgcagtttggttcggttttaaggttaaaagtcatccgaaccgtaagataaaaaa-catgcagtttggtttggttcggttgactttt 48338383  T
Q  821 aaaaagtcatcaaaaccaaac-----caatgcggtttgaattggttcgg 864  Q
    ||||    ||| |||||||||     |||||||||||||||||| ||||    
T  48338384 aaaataaaatccaaaccaaaccaaatcaatgcggtttgaattggatcgg 48338432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 725 - 803
Target Start/End: Original strand, 41260219 - 41260298
Alignment:
Q  725 ggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtt 803  Q
    |||||| | |||||||||||||| |||||||||||||||| |||||| |||||||||||||| ||| || ||||| ||||    
T  41260219 ggtgtttgtggtgcggtttggttcggttttgagcataaaaatcatcctaaccgcgagataaataaggatacagttcggtt 41260298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 721 - 824
Target Start/End: Original strand, 20986364 - 20986468
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||| ||| ||||||||| || ||||||||   |||||||||||| |||||| ||||||| ||| |||| |||||||||| || |||||| ||     
T  20986364 taggggtgtttgcgatgcggtttgtttcggttttgaagctaaaagtcatccaaaccgcaagataaacaagtatgcggtttggtttggttcggttgactta 20986463  T
Q  820 taaaa 824  Q
    |||||    
T  20986464 taaaa 20986468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 724 - 824
Target Start/End: Original strand, 8484611 - 8484712
Alignment:
Q  724 gggtgttcgcggtgcggtttggtttggttttgagcataaaagtc-atccaaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaa 822  Q
    ||||||||||||| ||||| |||||| |||||||  ||||||||  ||||||||| ||||||| ||  |||| |||||  |||||| |||||| ||||||    
T  8484611 gggtgttcgcggtacggttcggtttgattttgaggttaaaagtctttccaaccgcaagataaataactatgcggtttgtgttgattcggttgacttttaa 8484710  T
Q  823 aa 824  Q
    ||    
T  8484711 aa 8484712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 721 - 814
Target Start/End: Complemental strand, 10778613 - 10778519
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatc-caaccgcgagataaaaaagcatgcagtttggtttgatttggttg 814  Q
    ||||||||||| |||||||||||| || | |||||||  ||||||| |||  |||||| |||||||||| || || ||||| |||| ||||||||    
T  10778613 taggggtgttcacggtgcggtttgattcgattttgagattaaaagttatctgaaccgcaagataaaaaaacacgcggtttgatttggtttggttg 10778519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 732 - 805
Target Start/End: Complemental strand, 11031764 - 11031690
Alignment:
Q  732 gcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttg 805  Q
    |||||||||||||| |||||||||||  ||||||||| || || |||  ||||||||||||||  ||||||||||    
T  11031764 gcggtgcggtttgggttggttttgaggctaaaagtcagccaaatcgcatgataaaaaagcatgtggtttggtttg 11031690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 791 - 844
Target Start/End: Original strand, 4688690 - 4688743
Alignment:
Q  791 atgcagtttggtttgatttggttgatttttaaaaagtcatcaaaaccaaaccaa 844  Q
    ||||||||||||| |||| |||||| ||||||||||| |||  |||||||||||    
T  4688690 atgcagtttggttcgattcggttgacttttaaaaagttatcttaaccaaaccaa 4688743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 724 - 824
Target Start/End: Complemental strand, 18536781 - 18536680
Alignment:
Q  724 gggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaa 822  Q
    |||||||||| |||| |||| ||| ||||||||   ||||| |||||||| || | |||||||||||||  |||||||| ||| || |||||| ||||||    
T  18536781 gggtgttcgcagtgcagttttgttcggttttgaagctaaaattcatccaaaccacaagataaaaaagcacacagtttgggttggttcggttgacttttaa 18536682  T
Q  823 aa 824  Q
    ||    
T  18536681 aa 18536680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 89; Significance: 2e-42; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 721 - 844
Target Start/End: Complemental strand, 69680 - 69556
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||  |||||||||| || ||||||||||    
T  69680 taggggtgttcgcggtgcggtttggttcgattttgagcataaaagtcatccaaaccgcgagataaaaaagcatgtggtttggtttggttcggttgatttt 69581  T
Q  820 taaaaagtcatcaaaaccaaaccaa 844  Q
    |||||||||||| ||||||||||||    
T  69580 taaaaagtcatccaaaccaaaccaa 69556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 87; Significance: 3e-41; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 721 - 862
Target Start/End: Complemental strand, 6023 - 5881
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatccaa-ccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| | |||  ||||||| | |||||||| |||||||| |||||||||||| |||||||||| || ||||||||||    
T  6023 taggggtgttcgcggtgcggtttggttcgatttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttt 5924  T
Q  820 taaaaagtcatcaaaaccaaaccaatgcggtttgaattggttc 862  Q
    |||||||||||| ||||||||||||||||||||| ||||||||    
T  5923 taaaaagtcatccaaaccaaaccaatgcggtttggattggttc 5881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 73; Significance: 7e-33; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 721 - 844
Target Start/End: Original strand, 105972 - 106096
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    ||||||||||||||||||||||||||| | ||||||||| ||||||||||| |||||| |||||||||||||||  |||||||||| || ||||||||||    
T  105972 taggggtgttcgcggtgcggtttggttcgattttgagcaaaaaagtcatccaaaccgcaagataaaaaagcatgtggtttggtttggttcggttgatttt 106071  T
Q  820 taaaaagtcatcaaaaccaaaccaa 844  Q
    ||||| |||||| ||||| ||||||    
T  106072 taaaatgtcatccaaaccgaaccaa 106096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 721 - 844
Target Start/End: Original strand, 128579 - 128703
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttt 819  Q
    |||||||||| |||||||||||||||| | ||||||||||||||||||||| |||||| |||||||||||||||  |||||||||| ||  |||||||||    
T  128579 taggggtgtttgcggtgcggtttggttcgattttgagcataaaagtcatccaaaccgcaagataaaaaagcatgtggtttggtttggttctgttgatttt 128678  T
Q  820 taaaaagtcatcaaaaccaaaccaa 844  Q
    |||||||||||| ||||| ||||||    
T  128679 taaaaagtcatccaaaccgaaccaa 128703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 60; Significance: 4e-25; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 721 - 844
Target Start/End: Complemental strand, 40725 - 40591
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgattt---------- 809  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||| ||||||||||  ||||| |||||||||| |||              
T  40725 taggggtgttcgcggtgcggtttggttcggttttgagcataatagtcatccaaaccgtgagataaaaactcatgcggtttggtttggtttggtttggttc 40626  T
Q  810 ggttgatttttaaaaagtcatcaaaaccaaaccaa 844  Q
    |||||||||||||||||||||| ||||||||||||    
T  40625 ggttgatttttaaaaagtcatccaaaccaaaccaa 40591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 722 - 864
Target Start/End: Original strand, 25807 - 25954
Alignment:
Q  722 aggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgattttt 820  Q
    |||||| || ||||||| |||||||| |||||| ||  |||||||||||| |||||  |||||||||| |||||||||||||||| || |||||| ||||    
T  25807 aggggtatttgcggtgcagtttggttcggttttaaggttaaaagtcatccgaaccgtaagataaaaaa-catgcagtttggtttggttcggttgactttt 25905  T
Q  821 aaaaagtcatcaaaaccaaac-----caatgcggtttgaattggttcgg 864  Q
    ||||    ||| |||||||||     |||||||||||||||||| ||||    
T  25906 aaaataaaatccaaaccaaaccaaatcaatgcggtttgaattggatcgg 25954  T

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Target: scaffold0204; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 721 - 805
Target Start/End: Original strand, 14465 - 14550
Alignment:
Q  721 taggggtgttcgcggtgcggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttg 805  Q
    |||| ||||| ||||||||||||||||  |||||||   |||||||||||| |||||| ||||||||||||||||  |||||||||    
T  14465 taggagtgtttgcggtgcggtttggttcagttttgaagttaaaagtcatccgaaccgcaagataaaaaagcatgcgatttggtttg 14550  T

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Target: scaffold0688 (Bit Score: 31; Significance: 0.00000008; HSPs: 2)
Name: scaffold0688
Description:

Target: scaffold0688; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 739 - 824
Target Start/End: Original strand, 1119 - 1204
Alignment:
Q  739 ggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaaa 824  Q
    ||||||||| |||||||||  |||||||||||| |||||| |||||||||| ||||  ||||||| || || |||||||| ||||||    
T  1119 ggtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaaaaa-catgtggtttggtgtggttcggttgattcttaaaa 1204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0688; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 739 - 824
Target Start/End: Original strand, 7688 - 7773
Alignment:
Q  739 ggtttggtttggttttgagcataaaagtcatcc-aaccgcgagataaaaaagcatgcagtttggtttgatttggttgatttttaaaa 824  Q
    ||||||||| |||||||||  |||||||||||| |||||| |||||||||| ||||  ||||||| || || |||||||| ||||||    
T  7688 ggtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaaaaa-catgtggtttggtgtggttcggttgattcttaaaa 7773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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