View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11856_low_30 (Length: 404)

Name: NF11856_low_30
Description: NF11856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11856_low_30
NF11856_low_30
[»] chr4 (64 HSPs)
chr4 (208-391)||(44145842-44146025)
chr4 (27-173)||(44145697-44145844)
chr4 (141-331)||(43961449-43961644)
chr4 (101-334)||(17182490-17182731)
chr4 (105-333)||(55080581-55080815)
chr4 (101-328)||(22186717-22186950)
chr4 (103-331)||(56135749-56135965)
chr4 (103-306)||(7977530-7977741)
chr4 (103-306)||(37761465-37761673)
chr4 (105-306)||(47846090-47846298)
chr4 (99-306)||(54576362-54576577)
chr4 (124-286)||(29993826-29993993)
chr4 (137-286)||(4437480-4437633)
chr4 (27-103)||(44156199-44156275)
chr4 (101-286)||(5824899-5825085)
chr4 (161-285)||(54001162-54001289)
chr4 (103-285)||(51329796-51329983)
chr4 (103-302)||(21694929-21695132)
chr4 (150-295)||(34995099-34995247)
chr4 (103-191)||(49735468-49735557)
chr4 (159-272)||(9030272-9030391)
chr4 (103-195)||(54935067-54935161)
chr4 (107-266)||(55510173-55510338)
chr4 (100-168)||(46007879-46007948)
chr4 (200-334)||(11089619-11089756)
chr4 (101-195)||(35543448-35543543)
chr4 (100-315)||(47433734-47433956)
chr4 (101-171)||(54320609-54320680)
chr4 (192-270)||(14539367-14539445)
chr4 (124-213)||(51074363-51074459)
chr4 (103-167)||(31348500-31348565)
chr4 (105-185)||(54576329-54576410)
chr4 (99-171)||(54935244-54935317)
chr4 (325-385)||(44156147-44156207)
chr4 (105-192)||(47846417-47846505)
chr4 (101-147)||(49735691-49735738)
chr4 (103-223)||(29798288-29798410)
chr4 (218-268)||(51075218-51075268)
chr4 (124-185)||(21694912-21694973)
chr4 (137-231)||(41227518-41227614)
chr4 (101-164)||(16400798-16400862)
chr4 (107-233)||(27735749-27735881)
chr4 (101-184)||(37711285-37711369)
chr4 (105-191)||(27735900-27735987)
chr4 (99-169)||(37761641-37761712)
chr4 (101-170)||(26166935-26167005)
chr4 (103-171)||(1968534-1968603)
chr4 (103-171)||(6938422-6938491)
chr4 (103-284)||(17938164-17938352)
chr4 (103-147)||(37711138-37711183)
chr4 (106-185)||(29993774-29993854)
chr4 (100-171)||(34995224-34995296)
chr4 (101-156)||(35565556-35565612)
chr4 (101-232)||(45132610-45132741)
chr4 (101-171)||(45741888-45741959)
chr4 (105-170)||(2247977-2248043)
chr4 (127-184)||(7977520-7977578)
chr4 (237-315)||(35543333-35543411)
chr4 (103-144)||(41174547-41174589)
chr4 (103-143)||(53260718-53260759)
chr4 (106-145)||(5731032-5731072)
chr4 (249-325)||(11842325-11842401)
chr4 (142-186)||(32192847-32192891)
chr4 (103-142)||(54320435-54320475)
[»] chr8 (44 HSPs)
chr8 (103-306)||(12022178-12022387)
chr8 (137-334)||(39449339-39449546)
chr8 (103-295)||(8815187-8815385)
chr8 (103-306)||(43732679-43732896)
chr8 (101-306)||(30365128-30365339)
chr8 (100-284)||(16024150-16024341)
chr8 (106-331)||(20472702-20472933)
chr8 (103-310)||(9933240-9933454)
chr8 (111-303)||(34196316-34196514)
chr8 (104-265)||(43826333-43826500)
chr8 (101-284)||(8671849-8672040)
chr8 (103-263)||(9434377-9434543)
chr8 (103-271)||(40633059-40633232)
chr8 (106-269)||(6453185-6453356)
chr8 (107-192)||(7394615-7394701)
chr8 (97-185)||(12022136-12022226)
chr8 (101-185)||(43732848-43732933)
chr8 (209-271)||(29937614-29937676)
chr8 (101-169)||(31543249-31543318)
chr8 (103-171)||(1027023-1027092)
chr8 (97-185)||(8815135-8815224)
chr8 (101-171)||(2248450-2248521)
chr8 (126-171)||(30581988-30582033)
chr8 (103-174)||(9718651-9718723)
chr8 (103-171)||(40990359-40990427)
chr8 (109-171)||(1281149-1281212)
chr8 (109-195)||(36308994-36309081)
chr8 (96-169)||(7503131-7503205)
chr8 (103-171)||(31543072-31543141)
chr8 (98-162)||(34196492-34196556)
chr8 (101-157)||(40632994-40633051)
chr8 (103-170)||(30365306-30365374)
chr8 (101-171)||(7979138-7979209)
chr8 (106-271)||(24243118-24243287)
chr8 (98-142)||(2481977-2482022)
chr8 (103-167)||(13404976-13405041)
chr8 (103-171)||(34634318-34634387)
chr8 (194-255)||(38198135-38198196)
chr8 (103-147)||(41103504-41103549)
chr8 (101-167)||(11033417-11033482)
chr8 (107-170)||(11575582-11575646)
chr8 (106-185)||(16024315-16024394)
chr8 (194-238)||(27487087-27487131)
chr8 (101-184)||(31738585-31738669)
[»] chr5 (45 HSPs)
chr5 (103-306)||(10204576-10204785)
chr5 (103-306)||(15986659-15986868)
chr5 (103-331)||(40305670-40305909)
chr5 (105-331)||(8551427-8551660)
chr5 (103-306)||(33744228-33744437)
chr5 (105-306)||(34980812-34981019)
chr5 (103-306)||(10043252-10043461)
chr5 (101-285)||(21580945-21581135)
chr5 (137-256)||(5688448-5688572)
chr5 (192-295)||(6382422-6382525)
chr5 (98-191)||(14245083-14245177)
chr5 (104-175)||(13634882-13634954)
chr5 (103-171)||(7544136-7544205)
chr5 (103-167)||(13634711-13634776)
chr5 (98-186)||(14245206-14245295)
chr5 (105-191)||(1657968-1658055)
chr5 (144-286)||(6597845-6597984)
chr5 (103-266)||(11436939-11437108)
chr5 (99-184)||(15858902-15858988)
chr5 (194-295)||(10043055-10043156)
chr5 (103-171)||(26414893-26414962)
chr5 (101-172)||(10476202-10476274)
chr5 (107-165)||(2550533-2550592)
chr5 (102-192)||(14684638-14684729)
chr5 (101-147)||(16938477-16938524)
chr5 (192-270)||(12036007-12036084)
chr5 (98-191)||(15986619-15986713)
chr5 (98-146)||(5688590-5688639)
chr5 (101-169)||(33744191-33744260)
chr5 (108-191)||(36363187-36363271)
chr5 (100-170)||(10204752-10204823)
chr5 (99-169)||(34980987-34981058)
chr5 (124-173)||(10043425-10043474)
chr5 (148-184)||(6382357-6382393)
chr5 (103-166)||(10476026-10476090)
chr5 (103-142)||(20147074-20147114)
chr5 (96-284)||(28279533-28279728)
chr5 (100-142)||(40305667-40305710)
chr5 (101-174)||(11756876-11756949)
chr5 (103-184)||(12035936-12036018)
chr5 (97-125)||(8503051-8503079)
chr5 (101-191)||(11437094-11437188)
chr5 (105-171)||(16501966-16502034)
chr5 (103-170)||(40815297-40815365)
chr5 (100-163)||(42681445-42681509)
[»] chr7 (51 HSPs)
chr7 (103-306)||(33519048-33519257)
chr7 (97-271)||(37925835-37926015)
chr7 (103-306)||(36267588-36267797)
chr7 (101-315)||(39646467-39646687)
chr7 (101-286)||(28074158-28074354)
chr7 (124-334)||(48013525-48013740)
chr7 (100-306)||(37620771-37620983)
chr7 (106-301)||(35421967-35422168)
chr7 (137-306)||(48881593-48881768)
chr7 (106-311)||(21857350-21857560)
chr7 (106-306)||(31364080-31364285)
chr7 (104-249)||(12670928-12671079)
chr7 (101-277)||(8122142-8122328)
chr7 (116-284)||(48015224-48015394)
chr7 (193-331)||(23116269-23116408)
chr7 (158-267)||(3215934-3216048)
chr7 (104-216)||(12682854-12682972)
chr7 (105-269)||(16833684-16833867)
chr7 (148-286)||(3143526-3143673)
chr7 (99-171)||(36267549-36267622)
chr7 (103-171)||(39856040-39856109)
chr7 (101-184)||(48881556-48881640)
chr7 (103-185)||(28074103-28074186)
chr7 (101-195)||(47390853-47390948)
chr7 (206-302)||(30592292-30592388)
chr7 (100-170)||(33519224-33519295)
chr7 (98-195)||(18795746-18795843)
chr7 (103-174)||(1051670-1051742)
chr7 (104-171)||(31571645-31571713)
chr7 (95-177)||(41496949-41497032)
chr7 (192-295)||(2087785-2087892)
chr7 (101-233)||(33655216-33655354)
chr7 (103-195)||(13771097-13771190)
chr7 (101-162)||(31553183-31553243)
chr7 (103-170)||(4833531-4833599)
chr7 (101-184)||(13770946-13771030)
chr7 (98-168)||(40282192-40282263)
chr7 (101-146)||(25887190-25887236)
chr7 (101-186)||(40196530-40196616)
chr7 (124-182)||(48147404-48147462)
chr7 (103-171)||(4835479-4835548)
chr7 (192-333)||(17852966-17853106)
chr7 (103-175)||(18231757-18231830)
chr7 (103-170)||(30592253-30592321)
chr7 (97-171)||(34228494-34228569)
chr7 (131-233)||(41497065-41497172)
chr7 (127-185)||(31364070-31364128)
chr7 (124-185)||(37926002-37926063)
chr7 (99-171)||(43230232-43230305)
chr7 (137-185)||(39646630-39646678)
chr7 (103-170)||(48015383-48015451)
[»] scaffold0095 (1 HSPs)
scaffold0095 (137-334)||(8182-8390)
[»] chr1 (43 HSPs)
chr1 (101-306)||(1085524-1085736)
chr1 (99-329)||(33643264-33643499)
chr1 (103-286)||(35927814-35928001)
chr1 (106-306)||(40709327-40709532)
chr1 (130-334)||(47071079-47071288)
chr1 (151-305)||(25268313-25268472)
chr1 (139-286)||(2506576-2506728)
chr1 (132-264)||(51303461-51303600)
chr1 (101-310)||(525133-525346)
chr1 (103-185)||(51303384-51303467)
chr1 (145-332)||(1344592-1344783)
chr1 (209-306)||(35512909-35513006)
chr1 (111-271)||(13386989-13387163)
chr1 (103-254)||(17622536-17622694)
chr1 (111-195)||(23536839-23536924)
chr1 (137-271)||(40287325-40287467)
chr1 (100-271)||(20607220-20607390)
chr1 (107-169)||(35512974-35513037)
chr1 (101-191)||(38509892-38509983)
chr1 (103-171)||(12234010-12234079)
chr1 (100-223)||(30010329-30010458)
chr1 (97-171)||(40094927-40095002)
chr1 (110-171)||(2859107-2859169)
chr1 (148-256)||(52707691-52707803)
chr1 (103-174)||(41498404-41498476)
chr1 (101-171)||(35349637-35349708)
chr1 (103-147)||(26324014-26324059)
chr1 (101-173)||(40709290-40709363)
chr1 (153-249)||(50079476-50079577)
chr1 (105-171)||(12234185-12234252)
chr1 (101-171)||(32951493-32951564)
chr1 (106-171)||(38510069-38510135)
chr1 (102-170)||(2858931-2859000)
chr1 (103-147)||(20607416-20607461)
chr1 (103-171)||(30010507-30010576)
chr1 (97-171)||(1085483-1085559)
chr1 (101-171)||(7444476-7444547)
chr1 (100-145)||(20576130-20576176)
chr1 (100-137)||(26941042-26941080)
chr1 (101-170)||(35927988-35928058)
chr1 (107-222)||(51597672-51597793)
chr1 (101-171)||(41498579-41498651)
chr1 (192-252)||(44210994-44211054)
[»] chr6 (40 HSPs)
chr6 (101-271)||(15353362-15353537)
chr6 (101-271)||(15323223-15323399)
chr6 (103-285)||(9051590-9051776)
chr6 (99-304)||(31798914-31799128)
chr6 (101-306)||(10293248-10293457)
chr6 (103-216)||(23090995-23091114)
chr6 (142-267)||(26318345-26318475)
chr6 (136-271)||(4097305-4097451)
chr6 (101-233)||(4097620-4097759)
chr6 (192-295)||(3841180-3841284)
chr6 (201-271)||(15373669-15373739)
chr6 (97-171)||(14515467-14515542)
chr6 (103-306)||(10818229-10818425)
chr6 (192-286)||(25468454-25468548)
chr6 (201-306)||(34176606-34176711)
chr6 (147-186)||(15373737-15373776)
chr6 (103-169)||(30487306-30487373)
chr6 (100-169)||(12811157-12811227)
chr6 (148-186)||(34177060-34177098)
chr6 (103-171)||(9721138-9721207)
chr6 (104-196)||(10818366-10818459)
chr6 (193-233)||(28477076-28477116)
chr6 (193-233)||(29692974-29693014)
chr6 (153-196)||(5287471-5287514)
chr6 (106-171)||(9719034-9719100)
chr6 (106-171)||(19278213-19278278)
chr6 (111-171)||(23091133-23091195)
chr6 (106-171)||(30487480-30487546)
chr6 (103-191)||(665841-665929)
chr6 (98-166)||(31849105-31849174)
chr6 (97-184)||(4097229-4097317)
chr6 (100-147)||(9298690-9298738)
chr6 (104-199)||(9719178-9719273)
chr6 (97-134)||(1300623-1300661)
chr6 (99-184)||(14515633-14515719)
chr6 (137-191)||(31849265-31849319)
chr6 (99-171)||(9051530-9051603)
chr6 (99-175)||(25468562-25468639)
chr6 (124-173)||(34176593-34176642)
chr6 (103-170)||(16738172-16738239)
[»] chr2 (47 HSPs)
chr2 (103-285)||(31061359-31061547)
chr2 (103-286)||(45257307-45257496)
chr2 (101-295)||(42296349-42296549)
chr2 (111-264)||(33265615-33265773)
chr2 (105-267)||(3094427-3094595)
chr2 (103-268)||(2381060-2381231)
chr2 (104-285)||(1052811-1053000)
chr2 (136-271)||(15085770-15085911)
chr2 (110-264)||(31928121-31928286)
chr2 (103-271)||(34187575-34187751)
chr2 (151-283)||(45098218-45098355)
chr2 (151-284)||(35325316-35325456)
chr2 (103-224)||(1270394-1270522)
chr2 (100-216)||(17333936-17334059)
chr2 (198-310)||(36052118-36052230)
chr2 (101-171)||(22356179-22356250)
chr2 (194-271)||(8554369-8554446)
chr2 (153-225)||(22356016-22356093)
chr2 (103-191)||(23748250-23748339)
chr2 (193-298)||(9313079-9313188)
chr2 (137-268)||(21502067-21502204)
chr2 (100-171)||(887285-887356)
chr2 (101-167)||(35736173-35736240)
chr2 (101-171)||(36347716-36347787)
chr2 (103-168)||(35736365-35736431)
chr2 (203-305)||(42813726-42813828)
chr2 (99-147)||(17379842-17379891)
chr2 (103-226)||(41778773-41778902)
chr2 (103-233)||(15224802-15224938)
chr2 (103-185)||(42813781-42813864)
chr2 (105-171)||(2241413-2241479)
chr2 (105-233)||(16713494-16713628)
chr2 (103-232)||(886919-887051)
chr2 (124-215)||(23739882-23739978)
chr2 (137-196)||(14196819-14196878)
chr2 (105-171)||(36046377-36046443)
chr2 (98-166)||(2380987-2381057)
chr2 (139-185)||(33265767-33265813)
chr2 (101-171)||(45257482-45257553)
chr2 (103-144)||(17380043-17380085)
chr2 (106-171)||(31795772-31795838)
chr2 (192-306)||(31795804-31795918)
chr2 (124-169)||(8426901-8426946)
chr2 (103-171)||(9631735-9631804)
chr2 (99-147)||(40022359-40022407)
chr2 (248-304)||(14187111-14187167)
chr2 (235-267)||(22356141-22356173)
[»] chr3 (39 HSPs)
chr3 (141-330)||(40858604-40858798)
chr3 (103-331)||(41414078-41414313)
chr3 (137-306)||(34641027-34641199)
chr3 (109-304)||(16884010-16884209)
chr3 (107-286)||(17474261-17474446)
chr3 (137-331)||(48683647-48683848)
chr3 (109-286)||(10943669-10943852)
chr3 (106-283)||(21090129-21090312)
chr3 (103-264)||(44412361-44412528)
chr3 (132-306)||(26135827-26136006)
chr3 (103-286)||(24253721-24253911)
chr3 (105-315)||(42772046-42772250)
chr3 (115-302)||(18086019-18086218)
chr3 (143-305)||(8432297-8432462)
chr3 (137-264)||(46978462-46978594)
chr3 (105-185)||(44412522-44412603)
chr3 (137-284)||(42699669-42699821)
chr3 (96-256)||(27197734-27197900)
chr3 (103-185)||(34641151-34641234)
chr3 (101-171)||(28582684-28582755)
chr3 (103-195)||(24560217-24560310)
chr3 (167-270)||(36727242-36727349)
chr3 (101-182)||(5961933-5962014)
chr3 (101-185)||(24253883-24253968)
chr3 (97-331)||(30200098-30200345)
chr3 (222-338)||(54985696-54985812)
chr3 (101-195)||(220548-220643)
chr3 (100-175)||(25654968-25655043)
chr3 (98-170)||(24560393-24560466)
chr3 (103-171)||(41110496-41110565)
chr3 (210-271)||(55428492-55428553)
chr3 (107-171)||(55428554-55428619)
chr3 (124-184)||(26135959-26136019)
chr3 (247-335)||(37102155-37102243)
chr3 (103-147)||(25655171-25655216)
chr3 (109-169)||(27541937-27541998)
chr3 (101-137)||(37102348-37102385)
chr3 (99-139)||(54574563-54574604)
chr3 (106-145)||(18654802-18654842)
[»] scaffold0026 (2 HSPs)
scaffold0026 (103-271)||(1467-1642)
scaffold0026 (106-186)||(1175-1256)
[»] scaffold0119 (2 HSPs)
scaffold0119 (103-286)||(37383-37572)
scaffold0119 (103-224)||(30715-30843)
[»] scaffold0071 (1 HSPs)
scaffold0071 (148-336)||(52932-53122)
[»] scaffold0007 (2 HSPs)
scaffold0007 (192-306)||(242311-242425)
scaffold0007 (129-185)||(242377-242433)
[»] scaffold0012 (1 HSPs)
scaffold0012 (137-286)||(184636-184796)
[»] scaffold1414 (1 HSPs)
scaffold1414 (157-268)||(355-473)
[»] scaffold0067 (2 HSPs)
scaffold0067 (103-195)||(39341-39434)
scaffold0067 (101-171)||(39184-39256)
[»] scaffold0240 (2 HSPs)
scaffold0240 (197-286)||(17640-17729)
scaffold0240 (97-170)||(17716-17788)
[»] scaffold0096 (1 HSPs)
scaffold0096 (101-170)||(6582-6652)
[»] scaffold0198 (1 HSPs)
scaffold0198 (106-170)||(3150-3215)
[»] scaffold0262 (1 HSPs)
scaffold0262 (103-175)||(16296-16369)
[»] scaffold0006 (1 HSPs)
scaffold0006 (206-254)||(81498-81546)


Alignment Details
Target: chr4 (Bit Score: 164; Significance: 2e-87; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 208 - 391
Target Start/End: Original strand, 44145842 - 44146025
Alignment:
Q  208 gaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcct 307  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44145842 gaagtattacatgatcatttataatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcct 44145941  T
Q  308 aaaccctcttcccaaacacacccttaataaagtaagtcaaaaagaattaatataagtaattaaaagtagtactatcatgtatct 391  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  44145942 aaaccctctttccaaatacacccttaataaagtaagtcaaaaagaattaatataagtaattaaaggtagtactatcatgtatct 44146025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 27 - 173
Target Start/End: Original strand, 44145697 - 44145844
Alignment:
Q  27 ggaataaaaaatgcagagttgtttaactcatgtcttactcgtatgaagattagagaactacaaagtaaacactcttagggtgtgtttggatt-gagggtt 125  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||| ||    
T  44145697 ggaataaaaaatgcagagttgtttaactcatgtcttacacgtatgaagattagagaactacaaagtaaatactcttagggtgtgtttggattcaaggttt 44145796  T
Q  126 aggaggggaagggaggggagggctcacttttattttttaaattacgaa 173  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44145797 aggaggggaagggaggggaggactcacttttattttttaaattacgaa 44145844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 141 - 331
Target Start/End: Original strand, 43961449 - 43961644
Alignment:
Q  141 gggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtgtttttgaagtattacatgatcattgatcatgct 235  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||     ||||||||||||||||||||| ||||||||| |||||| |    
T  43961449 gggagggctcacttttattttttaaattatgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgtt 43961548  T
Q  236 gttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcctaaaccctcttcccaaacacaccct 331  Q
    | |||||||||||| ||||||||||||||||||||   ||| ||||||||| ||  |||||||||||||| ||| |||||   |||||||||||||    
T  43961549 gataattcaattttctaaaaatcattttataatgttcataatttaaaaaagaaaaataagccctcccctcataatccctccatccaaacacaccct 43961644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 101 - 334
Target Start/End: Complemental strand, 17182731 - 17182490
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taa 194  Q
    ||||||||||||||||||||||||| | |||||||| ||| |||||| || |||||||||||||||||||||||||| ||||||| | ||||     |||    
T  17182731 ttagggtgtgtttggattgagggtttatgaggggaaaggaagggaggacttacttttattttttaaattacgaacaaggtaaaatatttttttaaaataa 17182632  T
Q  195 attaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttt--taaaaatcattttataatgtctttaaattaaaaaaggaatgt 292  Q
    |||||||||||||||||||||| ||||||||| |||||  ||||||||||||||||   |||||||||||||||| |||  ||| ||||||||| || ||    
T  17182631 attaagtgtttttgaagtattatatgatcatttatcatattgttaattcaatttttgcaaaaaatcattttataacgtcaataatttaaaaaagaaaagt 17182532  T
Q  293 aagccctcccctcctaaaccctcttcccaaacacacccttaa 334  Q
    ||  | |||||||||||| |||||  ||||||||||| ||||    
T  17182531 aaatcttcccctcctaaaacctctatccaaacacacctttaa 17182490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 105 - 333
Target Start/End: Original strand, 55080581 - 55080815
Alignment:
Q  105 ggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----tta 198  Q
    ||||||||||||||||||||| ||||| ||||| |||| || || ||| ||||||||| |||||||||||||||||||||||| |||| |||     |||    
T  55080581 ggtgtgtttggattgagggtttaggagaggaagagaggagatggttcatttttattttgtaaattacgaacaatgtaaaatgttttttcaaaataagtta 55080680  T
Q  199 agtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccc 298  Q
    |||||||||||||||||  ||||||||| |||||| |||||||| |||||| ||||||| ||||||||||||   ||| ||||||||| || ||||| ||    
T  55080681 agtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgttcgtaatttaaaaaagaaaagtaagtcc 55080780  T
Q  299 tcccctcctaaaccctcttcccaaacacaccctta 333  Q
    |||| ||||||||||||   |||||||||||||||    
T  55080781 tcccatcctaaaccctccatccaaacacaccctta 55080815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 101 - 328
Target Start/End: Original strand, 22186717 - 22186950
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaattaa 199  Q
    ||||||||| ||||||||||||||| |||| |||||||||||| || | ||||||||| |||||||||||| ||||| ||||||||| |||||||| |||    
T  22186717 ttagggtgtatttggattgagggtttaggaagggaagggagggcagagttcacttttaatttttaaattacaaacaacgtaaaatgtttttttaaaataa 22186816  T
Q  200 -----gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaa 294  Q
         ||||||||||||||||| || |||||| |||||| ||||||||||||||| |||||||||||||||||||||  ||| ||||||||| || || |    
T  22186817 ataaagtgtttttgaagtattatataatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaagtga 22186916  T
Q  295 gccctcccctcctaaaccctcttcccaaacacac 328  Q
    | ||||||||  |||||||||   ||||||||||    
T  22186917 gtcctccccttttaaaccctccatccaaacacac 22186950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 103 - 331
Target Start/End: Original strand, 56135749 - 56135965
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 196  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||     |||||    
T  56135749 agggtgtgtttggattgagggtttaggaggggaagggaggggagggttcatttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaat 56135848  T
Q  197 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc 296  Q
    |||||||||||||||||||| ||||||||| ||||   ||||||||||||||| |||||               |||||| ||||||||| || ||||||    
T  56135849 taagtgtttttgaagtattatatgatcatttatca---tgttaattcaattttctaaaa---------------ctttaatttaaaaaagaaaagtaagc 56135930  T
Q  297 cctcccctcctaaaccctcttcccaaacacaccct 331  Q
    |||||||||||||||||||   |||||||||||||    
T  56135931 cctcccctcctaaaccctccatccaaacacaccct 56135965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 103 - 306
Target Start/End: Complemental strand, 7977741 - 7977530
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt------taaa 195  Q
    ||||||||||||||||||||||| | |||||||| ||||||||||| ||| ||||||||||||||||||||| |||||||||||| ||||      ||||    
T  7977741 agggtgtgtttggattgagggtttatgaggggaaaggaggggagggttcaattttattttttaaattacgaagaatgtaaaatgttttttttaaagtaaa 7977642  T
Q  196 ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaatt-aaaaaaggaatgtaa 294  Q
    |||| |||||||||||||||| ||||||||| |||||| |||||||||||||||  ||| || ||||||||||||   ||| || ||||||| || ||||    
T  7977641 ttaattgtttttgaagtattatatgatcatttatcatgttgttaattcaattttcaaaatattattttataatgttcgtaatttaaaaaaagaaaagtaa 7977542  T
Q  295 gccctcccctcc 306  Q
    ||||||||||||    
T  7977541 gccctcccctcc 7977530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 103 - 306
Target Start/End: Original strand, 37761465 - 37761673
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt----taaatt 197  Q
    ||||||||||||||||||| ||| |||||| ||| |||||| || | ||||||||| ||||||||||||||||||  |||||| | ||||    ||||||    
T  37761465 agggtgtgtttggattgagagtttaggaggagaaaggagggtagagttcacttttaatttttaaattacgaacaacataaaatattttttagaataaatt 37761564  T
Q  198 aagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagcc 297  Q
    ||||||||||||||| ||| || |||||| |||||| ||||||||||||||| |||||||||||| ||||||||  ||| ||||||||| || | |||||    
T  37761565 aagtgtttttgaagtgttatataatcatttatcatgttgttaattcaattttctaaaaatcatttcataatgtccataatttaaaaaagaaaaggaagcc 37761664  T
Q  298 ctcccctcc 306  Q
    |||||||||    
T  37761665 ctcccctcc 37761673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 105 - 306
Target Start/End: Complemental strand, 47846298 - 47846090
Alignment:
Q  105 ggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt------aaatt 197  Q
    ||||||||||||||||||||| | |||| ||||||| ||||||| | ||||||||||||||||||| |||||||||||| ||| |||||      |||||    
T  47846298 ggtgtgtttggattgagggtttaagaggagaagggatgggagggtttacttttattttttaaattatgaacaatgtaaagtgttttttttaaaataaatt 47846199  T
Q  198 aagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagcc 297  Q
    ||||||||||||||||||| ||||| ||| |||||| | ||||||||||||| ||||||| |||||||||||||   || ||||||||| || |||| |     
T  47846198 aagtgtttttgaagtattatatgattatttatcatgttcttaattcaattttgtaaaaattattttataatgtccagaatttaaaaaagaaaagtaaact 47846099  T
Q  298 ctcccctcc 306  Q
    |||||||||    
T  47846098 ctcccctcc 47846090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 99 - 306
Target Start/End: Complemental strand, 54576577 - 54576362
Alignment:
Q  99 tcttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt----- 192  Q
    |||||||||||||||||||| |||||| | ||| ||||||||| | || | ||||||||| |||||||||||||||||| ||||||||| |||||         
T  54576577 tcttagggtgtgtttggattaagggtttaagagaggaagggagagaagagttcacttttaatttttaaattacgaacaacgtaaaatgttttttttttaa 54576478  T
Q  193 --aaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaat 290  Q
      ||||||| |||||||||||||||| || |||||| |||| | ||||||||||||||| || ||||||||||||||||||  |||  |||||||| ||     
T  54576477 ataaattaaatgtttttgaagtattatataatcatttatcacgttgttaattcaattttctataaatcattttataatgtccgtaatctaaaaaagaaaa 54576378  T
Q  291 gtaagccctcccctcc 306  Q
    ||||||||||||||||    
T  54576377 gtaagccctcccctcc 54576362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 124 - 286
Target Start/End: Complemental strand, 29993993 - 29993826
Alignment:
Q  124 ttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtgtttttgaagtattaca 218  Q
    ||||||||| || ||||||||||| ||||||||| ||||||||||||||||||||||||| || ||||||||     |||||| |||||||||||||| |    
T  29993993 ttaggagggaaatggaggggagggttcacttttactttttaaattacgaacaatgtaaaaagtttttttaaaatagattaagtatttttgaagtattata 29993894  T
Q  219 tgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 286  Q
    | |||||  |||||| ||||||||||||||| |||||||||||||||| ||||  ||| |||||||||    
T  29993893 tcatcatcaatcatgttgttaattcaattttctaaaaatcattttatagtgtccgtaatttaaaaaag 29993826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 137 - 286
Target Start/End: Complemental strand, 4437633 - 4437480
Alignment:
Q  137 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt----taaattaagtgtttttgaagtattacatgatcattgatcat 232  Q
    ||||||||||| ||| |||||||||||||||||  ||||||||||||||| |||     ||||| ||||||||||||||||||| ||||||| | |||||    
T  4437633 ggaggggagggttcatttttattttttaaattaaaaacaatgtaaaatgtttttaaaaataaatcaagtgtttttgaagtattatatgatcaattatcat 4437534  T
Q  233 gctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 286  Q
    | |||||||||||||||||||||||||||||||||| ||  ||| |||||||||    
T  4437533 gttgttaattcaattttttaaaaatcattttataatatccataatttaaaaaag 4437480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 44156275 - 44156199
Alignment:
Q  27 ggaataaaaaatgcagagttgtttaactcatgtcttactcgtatgaagattagagaactacaaagtaaacactctta 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  44156275 ggaataaaaaatgcagagttgtttaactcatgtcttactcgtatgaagattagagaattacatagtaaacactctta 44156199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 101 - 286
Target Start/End: Original strand, 5824899 - 5825085
Alignment:
Q  101 ttagggtgtgtttggattgagggtta-ggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaattaa 199  Q
    |||||||||||||||||||||||||  ||| ||||| | |||  || ||||| ||||||||||||||||||||| |||||||||||| | |||||| |||    
T  5824899 ttagggtgtgtttggattgagggttttggaagggaatgaaggttagtgctcatttttattttttaaattacgaaaaatgtaaaatgtttgtttaaaataa 5824998  T
Q  200 gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 286  Q
        ||| ||    ||| ||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||| | |||||||    
T  5824999 aatgtttggattggttatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtctgtaattcaaaaaag 5825085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 161 - 285
Target Start/End: Complemental strand, 54001289 - 54001162
Alignment:
Q  161 tttaaattacgaacaatgtaaaatgtctttttaaattaa------gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaa 254  Q
    ||||||| ||||||||||||||||||||||||||| |||      ||||||||||||||||| ||||||||| ||||||   ||||||||||||||||||    
T  54001289 tttaaatcacgaacaatgtaaaatgtctttttaaaataaataaaagtgtttttgaagtattatatgatcatttatcatg---ttaattcaattttttaaa 54001193  T
Q  255 aatcattttataatgtctttaaattaaaaaa 285  Q
    ||| |||||||||||||  ||| ||||||||    
T  54001192 aattattttataatgtccgtaatttaaaaaa 54001162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 103 - 285
Target Start/End: Original strand, 51329796 - 51329983
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 196  Q
    ||||||||||||||||||| ||| |||||||||||  || |||| | ||| ||||| ||||||||||||||||||   ||||||| ||||     |||||    
T  51329796 agggtgtgtttggattgagagtttaggaggggaagaaagaggagagttcaattttaatttttaaattacgaacaacacaaaatgtttttttaaaataaat 51329895  T
Q  197 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaa 285  Q
    ||||| |||||||||||||| || |||||| |||||  ||||||||||||||| || |||| |||||||||| ||  ||| ||||||||    
T  51329896 taagt-tttttgaagtattatataatcatttatcattttgttaattcaattttctataaattattttataatatccctaatttaaaaaa 51329983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 103 - 302
Target Start/End: Complemental strand, 21695132 - 21694929
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt----aaatt 197  Q
    ||||||||||||||||| ||||| | |||||||||| || |||||| | |||||| | |||||||||| | ||||| |||  | | |||||    |||||    
T  21695132 agggtgtgtttggattgggggtttatgaggggaaggaagcggagggtttacttttctattttaaattatggacaatataatttattttttttaataaatt 21695033  T
Q  198 aagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagcc 297  Q
    ||||||  ||||||||||| ||||||||| |||||  ||||| |||||||| ||||||| ||||||||| ||||  ||| ||||||||| || |||||||    
T  21695032 aagtgtgattgaagtattatatgatcatt-atcattttgttatttcaatttattaaaaaccattttatagtgtccgtaatttaaaaaagaaaagtaagcc 21694934  T
Q  298 ctccc 302  Q
    |||||    
T  21694933 ctccc 21694929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 150 - 295
Target Start/End: Original strand, 34995099 - 34995247
Alignment:
Q  150 cacttttattttttaaattacgaacaatgtaaaatgtcttt-----ttaaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattca 244  Q
    |||||||||||||||||||||||||||||| |||||| |||      ||||||||||||||||||||||||| | ||| ||| ||||||   ||||||||    
T  34995099 cacttttattttttaaattacgaacaatgtgaaatgtttttctaaaataaattaagtgtttttgaagtattataagattatttatcatg--tttaattca 34995196  T
Q  245 attttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaag 295  Q
    ||||| |||||||||||| ||||| ||  ||| ||||||||| || |||||    
T  34995197 attttctaaaaatcatttgataatatccgtaatttaaaaaagaaaagtaag 34995247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 103 - 191
Target Start/End: Original strand, 49735468 - 49735557
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 191  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||  ||||||||||||| ||||  | |||||||||||    
T  49735468 agggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttcatttttaaattacggacaacatgaaatgtctttt 49735557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 159 - 272
Target Start/End: Original strand, 9030272 - 9030391
Alignment:
Q  159 tttttaaattacgaacaatgtaaaatgtctttt------taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaatttttta 252  Q
    |||||||||||||||||| ||||||||| ||||      |||||||||||||||| |||||||| || |||||| |||||  | |||||| |||||| ||    
T  9030272 tttttaaattacgaacaacgtaaaatgttttttaaacaataaattaagtgtttttaaagtattatataatcatttatcattttattaattaaattttcta 9030371  T
Q  253 aaaatcattttataatgtct 272  Q
    ||||||||||||||||||||    
T  9030372 aaaatcattttataatgtct 9030391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 103 - 195
Target Start/End: Original strand, 54935067 - 54935161
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggagggg-agggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 195  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||| | |||||| ||||||||||||||||| || ||| |||| ||| ||||    
T  54935067 agggtgtgtttggattgagggtttaggaggggaagggagggggagggtttacttttcttttttaaattacgaactatataacatgtttttctaaa 54935161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 107 - 266
Target Start/End: Original strand, 55510173 - 55510338
Alignment:
Q  107 tgtgtttggattgaggg-ttaggaggggaaggg-aggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaa 199  Q
    ||||||||||||||||| |||||  |||||||| |||||||| || ||||||  ||||||| |||   |||||||||||||| ||||||||     ||||    
T  55510173 tgtgtttggattgaggggttagggagggaaggggaggggaggacttacttttcatttttaatttaaagacaatgtaaaatgtttttttaaaataaattaa 55510272  T
Q  200 gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttata 266  Q
    ||||   |||||||||| ||||||||| |||||| ||||| ||||||||||| ||||| ||||||||    
T  55510273 gtgtgactgaagtattatatgatcattcatcatgttgttatttcaatttttttaaaat-attttata 55510338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 100 - 168
Target Start/End: Complemental strand, 46007948 - 46007879
Alignment:
Q  100 cttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaatt 168  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||| | |||||| |||||||||||    
T  46007948 cttagagtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaatt 46007879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 200 - 334
Target Start/End: Original strand, 11089619 - 11089756
Alignment:
Q  200 gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc--- 296  Q
    |||||||||||||| || ||||||||| || ||| ||||||||||||||| ||||||  ||||||||| |||  ||| ||||||||| ||||||| |       
T  11089619 gtgtttttgaagtaatatatgatcatttatgatgttgttaattcaattttctaaaaaatattttataaagtccgtaatttaaaaaagaaatgtaaaccat 11089718  T
Q  297 cctcccctcctaaaccctcttcccaaacacacccttaa 334  Q
    | |||||| ||||| ||||   ||||||||||||||||    
T  11089719 cttccccttctaaatcctcaatccaaacacacccttaa 11089756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 101 - 195
Target Start/End: Complemental strand, 35543543 - 35543448
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 195  Q
    ||||| ||||||||||||||||||| | ||||||||  || ||||| |||||||||||||||| ||||||||||||  ||||||| | ||||||||    
T  35543543 ttaggatgtgtttggattgagggtttatgaggggaaatgatgggagagctcacttttatttttaaaattacgaacatagtaaaatatttttttaaa 35543448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 100 - 315
Target Start/End: Complemental strand, 47433956 - 47433734
Alignment:
Q  100 cttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaat-gtaaaatgtctttt-----t 192  Q
    |||||||||||||||| |||| |||| ||||||||||||||| |||||| | |||||| |||||||||||||  || ||  ||| |||| ||||     |    
T  47433956 cttagggtgtgtttgggttgacggtttaggaggggaagggagaggagggtttacttttcttttttaaattacagactataataacatgtttttttaaaat 47433857  T
Q  193 aaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgt 292  Q
    |||||||||||  ||||||||||| |||||| || || ||| | ||| || ||||||||||||| ||||  ||||||||  ||| ||||||| | ||  |    
T  47433856 aaattaagtgtgattgaagtattatatgatcgtttat-atgttattattttaattttttaaaaaacattccataatgtccataatttaaaaacgaaaatt 47433758  T
Q  293 aagccc-tcccctcctaaaccctc 315  Q
    || ||| |||||||||||||||||    
T  47433757 aaacccttcccctcctaaaccctc 47433734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 54320680 - 54320609
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |   ||||| |||||||||||||    
T  54320680 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgattttaatttttaaattacg 54320609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 14539367 - 14539445
Alignment:
Q  192 taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgt 270  Q
    ||||||||||||||||||||||||| ||||||||| || ||| | |||||| |||||| ||| || |||||||||||||    
T  14539367 taaattaagtgtttttgaagtattatatgatcatttattatgttcttaatttaattttctaacaaacattttataatgt 14539445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 213
Target Start/End: Original strand, 51074363 - 51074459
Alignment:
Q  124 ttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-------taaattaagtgtttttgaagta 213  Q
    |||||||| ||| ||| ||||||||||||||||||||||||||||| ||||| |||||| ||| ||||       ||||||||||||||||||||||    
T  51074363 ttaggaggagaaaggacgggagggctcacttttattttttaaattatgaacattgtaaagtgtttttttttttaataaattaagtgtttttgaagta 51074459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 103 - 167
Target Start/End: Complemental strand, 31348565 - 31348500
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaat 167  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||| | |||||| ||||||||||    
T  31348565 agggtgtgtttggattgagagtttaggaggggaagggaggggagggtttacttttcttttttaaat 31348500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 54576329 - 54576410
Alignment:
Q  105 ggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 185  Q
    ||||||||||||| ||||||| || ||||||||||||||||||||| |||||| ||||||| |||||| ||| | |||||||    
T  54576329 ggtgtgtttggatggagggtttagaaggggaagggaggggagggcttacttttcttttttagattacggacattataaaatg 54576410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 54935317 - 54935244
Alignment:
Q  99 tcttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||| | | ||||  |||||||||||||    
T  54935317 tcttagggtgtgtttggatggagggtttaggaggggaagggaggggagggtttatttttcatttttaaattacg 54935244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 325 - 385
Target Start/End: Complemental strand, 44156207 - 44156147
Alignment:
Q  325 acacccttaataaagtaagtcaaaaagaattaatataagtaattaaaagtagtactatcat 385  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||||| ||| |||||||||    
T  44156207 acactcttaataaaataagtcaaagagaattaatataagtaattaaaggtaatactatcat 44156147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 105 - 192
Target Start/End: Complemental strand, 47846505 - 47846417
Alignment:
Q  105 ggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt 192  Q
    ||||||||||||||||||||| | |||| |||||||  ||| || | ||||||||||||||||||| |||||||||||| ||| |||||    
T  47846505 ggtgtgtttggattgagggtttaagaggagaagggaaaggaaggtttacttttattttttaaattatgaacaatgtaaagtgttttttt 47846417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 101 - 147
Target Start/End: Complemental strand, 49735738 - 49735691
Alignment:
Q  101 ttagggtgtgtttggattgaggg-ttaggaggggaagggaggggaggg 147  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  49735738 ttagggtgtgtttggattgagggtttaggaggggaagggaggggaggg 49735691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 103 - 223
Target Start/End: Original strand, 29798288 - 29798410
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttt-ttaaattaag 200  Q
    |||||||||||||||||| |||| ||||||||||| ||| |||  | | ||||||||||||||||||||  || || ||| |||| ||| |||||| |||    
T  29798288 agggtgtgtttggattgatggtttaggaggggaagagagaggatagtttacttttattttttaaattacagactatataacatgtttttcttaaatcaag 29798387  T
Q  201 tgtttttgaagtattacatgatc 223  Q
    |||  ||||||||||| ||||||    
T  29798388 tgtgattgaagtattatatgatc 29798410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 51075218 - 51075268
Alignment:
Q  218 atgatcattgatcatgctgttaattcaattttttaaaaatcattttataat 268  Q
    ||||||||| |||||| ||||||||||||||||||||||| ||||||||||    
T  51075218 atgatcatttatcatgttgttaattcaattttttaaaaattattttataat 51075268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 21694912 - 21694973
Alignment:
Q  124 ttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 185  Q
    |||||||||||||||| ||||||||| |||||| |||||||||||||| ||| | |||||||    
T  21694912 ttaggaggggaagggacgggagggcttacttttcttttttaaattacggacactataaaatg 21694973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 41227518 - 41227614
Alignment:
Q  137 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt--taaattaagtgtttttgaagtattacatgatcattgatca 231  Q
    |||||| |||||| |||| | |||||||||||| ||||||| ||||||||| |||   |||||||||||  ||||||||||| ||||||||| ||||    
T  41227518 ggagggcagggcttacttctcttttttaaattatgaacaatataaaatgtcatttaaaaaattaagtgtgattgaagtattatatgatcatttatca 41227614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 101 - 164
Target Start/End: Original strand, 16400798 - 16400862
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttatttttta 164  Q
    |||| ||||| |||||||||||||| |||||| ||||||||||||||  ||||||||||||||||    
T  16400798 ttagtgtgtgattggattgagggtttaggaggagaagggaggggaggattcacttttatttttta 16400862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 107 - 233
Target Start/End: Original strand, 27735749 - 27735881
Alignment:
Q  107 tgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaag 200  Q
    ||||||||||| ||||||| |||||||||||||| | ||||| | | ||||  ||||||||||||| || || ||| |||| ||||||||     |||||    
T  27735749 tgtgtttggatcgagggtttaggaggggaagggaagagagggtttaattttcatttttaaattacggactatataacatgtttttttaaaataaattaag 27735848  T
Q  201 tgtttttgaagtattacatgatcattgatcatg 233  Q
    |||  ||||||||||| ||||||||| ||||||    
T  27735849 tgtgattgaagtattatatgatcatttatcatg 27735881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 101 - 184
Target Start/End: Complemental strand, 37711369 - 37711285
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaat 184  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| | |  |||  ||||||||||||| ||| | ||||||    
T  37711369 ttagggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagatttcatttttaaattacggacactataaaat 37711285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 105 - 191
Target Start/End: Complemental strand, 27735987 - 27735900
Alignment:
Q  105 ggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 191  Q
    ||||||||||||| ||||||| ||||||||||||||||  |||| ||| ||||  ||||||||||||| ||| | |||||||| ||||    
T  27735987 ggtgtgtttggatggagggtttaggaggggaagggaggatagggttcatttttcatttttaaattacggacactataaaatgtttttt 27735900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 37761712 - 37761641
Alignment:
Q  99 tcttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaatta 169  Q
    ||||||||||||||||||| |||| || |  |||||||||||||||||||||  ||||| ||||||||||||    
T  37761712 tcttagggtgtgtttggatggaggatttaaaaggggaagggaggggagggcttccttttcttttttaaatta 37761641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 170
Target Start/End: Original strand, 26166935 - 26167005
Alignment:
Q  101 ttagggtgtgtttggattgaggg-ttaggaggggaagggaggggagggctcacttttattttttaaattac 170  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||| | |   |||| |||||||||||||    
T  26166935 ttagggtgtgtttggattgagggtttaggaggggaatggaggggagagtttgtttttcttttttaaattac 26167005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 171
Target Start/End: Complemental strand, 1968603 - 1968534
Alignment:
Q  103 agggtgtgtttggattgaggg-ttaggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    ||||||||||||||||||||| ||||||||||||||||||| || | | | ||||  |||||||||||||    
T  1968603 agggtgtgtttggattgagggtttaggaggggaagggagggaagagtttaattttcatttttaaattacg 1968534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 171
Target Start/End: Complemental strand, 6938491 - 6938422
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    ||||||||||||||| || |||| | |||||||| ||||||||||| ||||||||  |||||||||||||    
T  6938491 agggtgtgtttggatggaaggtttatgaggggaatggaggggagggttcacttttcatttttaaattacg 6938422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 284
Target Start/End: Complemental strand, 17938352 - 17938164
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt------aaa 195  Q
    ||||| |||||||||||||  || |||||||||||||||  ||| | | |||||| ||||||||||||| ||| || ||| || | |||||      |||    
T  17938352 agggtatgtttggattgagaatttaggaggggaagggagatgagagtttacttttcttttttaaattacaaactatataacatatttttttttaaataaa 17938253  T
Q  196 ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaa 284  Q
    ||||||||  ||||||||||| |||||| || |||||| | ||| || || |||||||||| ||||  ||||||||  ||| |||||||    
T  17938252 ttaagtgtgattgaagtattatatgatcgtttatcatgttattattttaaatttttaaaaaacattccataatgtccataatttaaaaa 17938164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 147
Target Start/End: Original strand, 37711138 - 37711183
Alignment:
Q  103 agggtgtgtttggattgaggg-ttaggaggggaagggaggggaggg 147  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||    
T  37711138 agggtgtgtttggattgagggtttaggaggggaagggaagggaggg 37711183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 185
Target Start/End: Original strand, 29993774 - 29993854
Alignment:
Q  106 gtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 185  Q
    ||||||||||||| |||||| ||||||||||| ||| ||||| |||  |||| |||||||||||||| ||| | |||||||    
T  29993774 gtgtgtttggattaagggtttaggaggggaagtgagtggaggactcgtttttcttttttaaattacggacactataaaatg 29993854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 34995296 - 34995224
Alignment:
Q  100 cttagggtgtgtttggattgaggg-ttaggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    |||||||||||||| ||||||||| |||||| |||||| ||||| | | || |||||| ||||||||||||||    
T  34995296 cttagggtgtgtttagattgagggtttaggaagggaagtgagggtaagacttacttttcttttttaaattacg 34995224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 35565556 - 35565612
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcactttt 156  Q
    |||| ||| |||||||||||||||| || ||||||||||||||||||||| ||||||    
T  35565556 ttagagtgcgtttggattgagggtttagcaggggaagggaggggagggcttactttt 35565612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 232
Target Start/End: Complemental strand, 45132741 - 45132610
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaattaa 199  Q
    |||||||||||||| |||||| ||| ||||||||||| |||| || || | |||||| |||||||||||||| || || ||| ||||     ||||||||    
T  45132741 ttagggtgtgtttgaattgagagtttaggaggggaagagaggagatggtttacttttcttttttaaattacggactatataatatgt-aaaataaattaa 45132643  T
Q  200 gtgtttttgaagtattacatgatcattgatcat 232  Q
    ||||  ||||||||||| |||||| || |||||    
T  45132642 gtgtgattgaagtattatatgatcgtttatcat 45132610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 45741888 - 45741959
Alignment:
Q  101 ttagggtgtgtttggattgaggg-ttaggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    ||||||||||||||||||||||| |||||||||||| | | | ||||  | |||||| ||||||||||||||    
T  45741888 ttagggtgtgtttggattgagggtttaggaggggaatgaatgtgaggatttacttttgttttttaaattacg 45741959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 170
Target Start/End: Complemental strand, 2248043 - 2247977
Alignment:
Q  105 ggtgtgtttggattgaggg-ttaggaggggaagggaggggagggctcacttttattttttaaattac 170  Q
    ||||||||||||||||||| |||||||| |||| || ||||| | | |||||| |||||||||||||    
T  2248043 ggtgtgtttggattgagggtttaggaggagaagtgaagggagagtttacttttcttttttaaattac 2247977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 7977520 - 7977578
Alignment:
Q  127 ggaggggaagggaggggagggctcactttt-attttttaaattacgaacaatgtaaaat 184  Q
    |||||| |||||||||||||||| ||||||  |||||||||||||||||| | ||||||    
T  7977520 ggagggaaagggaggggagggcttacttttctttttttaaattacgaacattataaaat 7977578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 237 - 315
Target Start/End: Complemental strand, 35543411 - 35543333
Alignment:
Q  237 ttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcctaaaccctc 315  Q
    ||||||||||||||||||||| ||||||||||||   ||| ||||||||| ||  ||||  ||||| || |||||||||    
T  35543411 ttaattcaattttttaaaaattattttataatgttcctaatttaaaaaagaaaaataagttctcccttcttaaaccctc 35543333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 144
Target Start/End: Complemental strand, 41174589 - 41174547
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggagggga 144  Q
    ||||||||||||||| ||||||| |||||||||||||||||||    
T  41174589 agggtgtgtttggatggagggtttaggaggggaagggagggga 41174547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 143
Target Start/End: Original strand, 53260718 - 53260759
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggagggg 143  Q
    ||||||||||||||| ||||||| ||||||||||||||||||    
T  53260718 agggtgtgtttggatggagggtttaggaggggaagggagggg 53260759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 145
Target Start/End: Complemental strand, 5731072 - 5731032
Alignment:
Q  106 gtgtgtttggattgagggtt-aggaggggaagggaggggag 145  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  5731072 gtgtgtttgaattgagggtttaggaggggaagggaggggag 5731032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 325
Target Start/End: Complemental strand, 11842401 - 11842325
Alignment:
Q  249 tttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcctaaaccctcttcccaaaca 325  Q
    ||||||||  |||||||| ||||| ||| || |||||| || ||||| |||||||| |||||||||||  |||||||    
T  11842401 tttaaaaaatattttatagtgtctgtaatttgaaaaagaaaagtaagtcctccccttctaaaccctctatccaaaca 11842325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 32192847 - 32192891
Alignment:
Q  142 ggagggctcacttttattttttaaattacgaacaatgtaaaatgt 186  Q
    |||||| |||||||||||||||||||||  || ||||||||||||    
T  32192847 ggagggttcacttttattttttaaattatcaataatgtaaaatgt 32192891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 142
Target Start/End: Original strand, 54320435 - 54320475
Alignment:
Q  103 agggtgtgtttggattgaggg-ttaggaggggaagggaggg 142  Q
    ||||||||||||||||||||| ||||||||| |||||||||    
T  54320435 agggtgtgtttggattgagggtttaggagggaaagggaggg 54320475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 130; Significance: 3e-67; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 103 - 306
Target Start/End: Complemental strand, 12022387 - 12022178
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----t 196  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||     |    
T  12022387 agggtgtgtttggattgagggtttaggaggggaaaggaggggagggctcacttttattttttaaattacggacaatgtaaaatgtttttttaaaataaat 12022288  T
Q  197 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc 296  Q
    |||||||||||||||||||| ||||||||| |||||| ||||||||||||||| ||||||||||||||||||||   ||| ||||||||| || ||||||    
T  12022287 taagtgtttttgaagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgttcgtaatttaaaaaagaaaagtaagc 12022188  T
Q  297 cctcccctcc 306  Q
    ||||||||||    
T  12022187 cctcccctcc 12022178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 137 - 334
Target Start/End: Original strand, 39449339 - 39449546
Alignment:
Q  137 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaa-----attaagtgtttttgaagtattacatgatcattgatca 231  Q
    |||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||     ||||| |||||||||||||||| ||||||||| ||||    
T  39449339 ggagaggagagctcacttttattttttaaattacgaacaatgtgaaatgtctttttaagataaattaactgtttttgaagtattatatgatcattaatca 39449438  T
Q  232 tgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaag-----ccctcccctcctaaaccctcttcccaaacac 326  Q
    || ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||     |||||||||||||||| ||||||||||||||    
T  39449439 tgttgttaattcaattttttaaaaataattttataacgtctttaaattaaaaaaggaatgtaagccctcccctcccctcctaaactctcttcccaaacac 39449538  T
Q  327 acccttaa 334  Q
    ||||||||    
T  39449539 acccttaa 39449546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 103 - 295
Target Start/End: Complemental strand, 8815385 - 8815187
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt----taaatt 197  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||| ||||||||||||||||| |||||||||| ||||    ||||||    
T  8815385 agggtgtgtttggattgagggtttaggagggggagggaggggagggttcacttttaatttttaaattacgaacactgtaaaatgttttttcaaataaatt 8815286  T
Q  198 aa-gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaag 295  Q
    || ||||||||||||||||| || |||||| |||||| |||| |||||||||| |||||||||||||||||||||  ||| ||||||||| || |||||    
T  8815285 aaagtgtttttgaagtattatataatcatttatcatgttgttgattcaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaagtaag 8815187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 103 - 306
Target Start/End: Original strand, 43732679 - 43732896
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt---------- 191  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| ||||              
T  43732679 agggtgtgtttggattgagggtttaggaggggaagggagaggaggactcacttttattttttaaattactaacaatgtaaaatgtttttttttttaaaaa 43732778  T
Q  192 ---taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaagga 288  Q
       ||||||||||||||||||||||||| ||||||||| |||||  |||||||||||||||  ||||||||||||||||||||  ||| ||||||||| |    
T  43732779 aaataaattaagtgtttttgaagtattatatgatcatttatcatattgttaattcaattttcaaaaaatcattttataatgtccgtaatttaaaaaagaa 43732878  T
Q  289 atgtaagccctcccctcc 306  Q
    | |||| |||||||||||    
T  43732879 aagtaaaccctcccctcc 43732896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 101 - 306
Target Start/End: Original strand, 30365128 - 30365339
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taa 194  Q
    ||||||||||||||||||||||||| |||||| ||| ||||||||| | ||||||||| ||||||||||||||||||  |||||| | ||||     |||    
T  30365128 ttagggtgtgtttggattgagggtttaggaggagaaaggaggggagagttcacttttaatttttaaattacgaacaacataaaatatttttttagaataa 30365227  T
Q  195 attaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaa 294  Q
    |||||||||||||||||| ||| || |||||| |||||| ||||||||||||||| |||||||||||| ||||||||| ||| ||||||||| || | ||    
T  30365228 attaagtgtttttgaagtgttatataatcatttatcatgttgttaattcaattttctaaaaatcatttcataatgtctgtaatttaaaaaagaaaaggaa 30365327  T
Q  295 gccctcccctcc 306  Q
    ||||||||||||    
T  30365328 gccctcccctcc 30365339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 100 - 284
Target Start/End: Original strand, 16024150 - 16024341
Alignment:
Q  100 cttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt------t 192  Q
    |||| ||||||||||||||||||||| |||| ||||||||||||||| ||||| ||||  ||||||||||||||||||| |||||||  ||||      |    
T  16024150 cttatggtgtgtttggattgagggtttaggaagggaagggaggggagagctcagtttttgtttttaaattacgaacaatataaaatgattttttttaaat 16024249  T
Q  193 aaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaa 284  Q
    |||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||| |||||||||||||||||||||  ||| |||||||    
T  16024250 aaattaagtgtttttgaagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaa 16024341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 106 - 331
Target Start/End: Complemental strand, 20472933 - 20472702
Alignment:
Q  106 gtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaa 199  Q
    ||||||||||||||| |||| || |||| |||||| || ||| ||||||||||||||||||||||||||||||||||  ||| ||||     ||||| ||    
T  20472933 gtgtgtttggattgaaggtttagaagggaaagggaaggaaggactcacttttattttttaaattacgaacaatgtaagttgttttttaaaaataaatcaa 20472834  T
Q  200 gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccct 299  Q
    ||||||||||||||||| ||||||||  |||||  ||||||||||||||| ||||| | |||||||||||||| ||| ||||||||| || |||||||||    
T  20472833 gtgtttttgaagtattatatgatcatatatcatattgttaattcaattttctaaaatttattttataatgtctgtaatttaaaaaagaaaagtaagccct 20472734  T
Q  300 cccctcctaaaccctcttcccaaacacaccct 331  Q
     ||||| ||| ||||||  |||||||||||||    
T  20472733 tccctcttaatccctctatccaaacacaccct 20472702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 103 - 310
Target Start/End: Original strand, 9933240 - 9933454
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt------aaa 195  Q
    |||||||||||||||||| |||| |||||| ||| |||||| ||   |||||||||| ||||||||||||||||||||||||| | |||||      |||    
T  9933240 agggtgtgtttggattgaaggtttaggaggagaaaggagggaagaattcacttttatattttaaattacgaacaatgtaaaatatttttttcaaaataaa 9933339  T
Q  196 ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaag 295  Q
    |||||| |||||||| ||||| ||||||||| |||||| ||||||||||||||||| |||||||||||||||||||   |  ||||||||| || ||||     
T  9933340 ttaagtatttttgaaatattatatgatcatttatcatgttgttaattcaatttttttaaaatcattttataatgtccaaattttaaaaaagaaaagtaaa 9933439  T
Q  296 ccctcccctcctaaa 310  Q
    |||||||||||||||    
T  9933440 ccctcccctcctaaa 9933454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 111 - 303
Target Start/End: Original strand, 34196316 - 34196514
Alignment:
Q  111 tttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt----aaat---taagtg 202  Q
    ||||||||||||| | |||||||||||||||||| ||| ||||||| ||||||||||||||||||||||| || ||| |||||    ||||   ||||||    
T  34196316 tttggattgagggatcaggaggggaagggagggggggg-tcactttaattttttaaattacgaacaatgtgaagtgtttttttttttaaataaataagtg 34196414  T
Q  203 tttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctccc 302  Q
    |||||||||||||| |||||| || ||| || ||||||||||||||| |||||||||||||||||||||| | |||| |||||| || ||||||||||||    
T  34196415 tttttgaagtattatatgatcgtttatcttgttgttaattcaattttctaaaaatcattttataatgtctgt-aatttaaaaagaaaagtaagccctccc 34196513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 104 - 265
Target Start/End: Original strand, 43826333 - 43826500
Alignment:
Q  104 gggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaatt 197  Q
    |||||||||| |||||||| || |||||||||| ||||||||| | ||| ||||||||| |||||||||||||||||||||||| ||||     ||| ||    
T  43826333 gggtgtgtttagattgaggatttaggaggggaatggaggggagagttcatttttattttgtaaattacgaacaatgtaaaatgttttttcaaaataagtt 43826432  T
Q  198 aagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttat 265  Q
    ||||||||||||||||||  ||||||||| |||||| ||||||||||||||| ||||||| |||||||    
T  43826433 aagtgtttttgaagtattttatgatcatttatcatgttgttaattcaattttctaaaaattattttat 43826500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 101 - 284
Target Start/End: Complemental strand, 8672040 - 8671849
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa---- 195  Q
    |||||||||||||||||||||| || || ||||||||| |||||| | || | |||||||||||||||||| || |||||||||||| ||||||||        
T  8672040 ttagggtgtgtttggattgaggatttagaaggggaaggtaggggatgacttaattttattttttaaattacaaataatgtaaaatgtatttttaaaataa 8671941  T
Q  196 -ttaagtgtttttgaagtattacatgatcattgat--catgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaa 284  Q
     |||||| |||||||||||||| |||||||||  |  |||  ||||||||||||||| |||||||||||||||||||||  ||| |||||||    
T  8671940 attaagtatttttgaagtattatatgatcatttttttcatattgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaa 8671849  T

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Target: chr8; HSP #12
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 103 - 263
Target Start/End: Complemental strand, 9434543 - 9434377
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt------aaa 195  Q
    ||||||||||||||||||||||| | ||||| ||  || || || | ||||||||||||||||||||| |||||||||||||||| |||||      |||    
T  9434543 agggtgtgtttggattgagggtttacgaggg-aatagatggaagagttcacttttattttttaaattaggaacaatgtaaaatgttttttttttaataaa 9434445  T
Q  196 ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcatttt 263  Q
    ||||||| ||||||||||||| || |||||| |||||| ||||||||||||||||||||||| |||||    
T  9434444 ttaagtggttttgaagtattatattatcatttatcatgttgttaattcaattttttaaaaattatttt 9434377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 103 - 271
Target Start/End: Complemental strand, 40633232 - 40633059
Alignment:
Q  103 agggtgtgtttggattgagggtta-ggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 196  Q
    |||||||||||||||||||||||  ||| ||||||| || |||||  ||| ||||| ||||| |||||||||||| |||||||||  |||     |||||    
T  40633232 agggtgtgtttggattgagggtttcggaagggaaggaagcggaggt-tcaattttaatttttcaattacgaacaacgtaaaatgttgttttaaaataaat 40633134  T
Q  197 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 271  Q
    |||||||||||||| ||||| |  |||||| |||||| ||||||||||||||| ||||||| |||||||||||||    
T  40633133 taagtgtttttgaaatattatacaatcatttatcatgttgttaattcaattttctaaaaattattttataatgtc 40633059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 106 - 269
Target Start/End: Original strand, 6453185 - 6453356
Alignment:
Q  106 gtgtgtttggattgagggttagg-aggggaagggaggggagggctcacttttatttttt-aaattacgaacaatgtaaaatgtctttttaaa------tt 197  Q
    |||| ||||||||||||||| || ||   ||||||||||| | |||||||||||||||| |||||||||| |||||||||| | ||||| ||      ||    
T  6453185 gtgtatttggattgagggtttgggagaaaaagggaggggaagactcacttttatttttttaaattacgaataatgtaaaatattttttttaaaatatatt 6453284  T
Q  198 aagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatg 269  Q
    ||||||||||||||||||| ||||| | | |||||| | ||||||||||||| |||||||||||||||||||    
T  6453285 aagtgtttttgaagtattatatgattacttatcatgttattaattcaattttctaaaaatcattttataatg 6453356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 107 - 192
Target Start/End: Complemental strand, 7394701 - 7394615
Alignment:
Q  107 tgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt 192  Q
    ||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| |||| || |||||    
T  7394701 tgtgtttggattgagggtttaggaggggaagggaggggatggttcacttttattttttaaattacgaacaatgcaaaacgttttttt 7394615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 97 - 185
Target Start/End: Original strand, 12022136 - 12022226
Alignment:
Q  97 actcttagggtgtgtttggattgagggtt--aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 185  Q
    |||||||||||||||| |||| |||||||  || ||||||||||||||||||||| |||||| |||||||||||||||||| | |||||||    
T  12022136 actcttagggtgtgttaggatggagggtttgagaaggggaagggaggggagggcttacttttcttttttaaattacgaacattataaaatg 12022226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 101 - 185
Target Start/End: Complemental strand, 43732933 - 43732848
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 185  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| | |||||| |||||||||||||| ||| | |||||||    
T  43732933 ttagggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacggacattataaaatg 43732848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 271
Target Start/End: Original strand, 29937614 - 29937676
Alignment:
Q  209 aagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 271  Q
    |||||||| ||||||||| |||||| ||||||||||||||| |||||||||||||||||||||    
T  29937614 aagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtc 29937676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 31543318 - 31543249
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaatta 169  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||| | |||||| ||||||||||||    
T  31543318 ttagggtgtgtttcgattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaatta 31543249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 103 - 171
Target Start/End: Complemental strand, 1027092 - 1027023
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    |||||||||||||||| |||||| |||| |||||||||||| |||| |||||||| ||||||||||||||    
T  1027092 agggtgtgtttggattaagggtttaggaagggaagggagggaagggttcacttttcttttttaaattacg 1027023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 97 - 185
Target Start/End: Original strand, 8815135 - 8815224
Alignment:
Q  97 actcttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 185  Q
    ||||||||||||||||||||| ||||||| ||||||||||| |||| || | || |||||| |||||||||||||| ||| | |||||||    
T  8815135 actcttagggtgtgtttggatggagggtttaggaggggaagagaggtgatgacttacttttcttttttaaattacggacattataaaatg 8815224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 2248450 - 2248521
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||| | ||| |||  ||||||||||||||    
T  2248450 ttagggtgtgtttggattgagagtttaggaggggaagggaggggagagttcaatttccttttttaaattacg 2248521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 30582033 - 30581988
Alignment:
Q  126 aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||    
T  30582033 aggaggggaagggaggggagggcttacttttcttttttaaattacg 30581988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 103 - 174
Target Start/End: Complemental strand, 9718723 - 9718651
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaac 174  Q
    ||||||||||||||||||||||| |||||| ||||||||||||  | | |||||| |||||||||||| ||||    
T  9718723 agggtgtgtttggattgagggtttaggaggagaagggaggggaaagtttacttttcttttttaaattatgaac 9718651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 103 - 171
Target Start/End: Complemental strand, 40990427 - 40990359
Alignment:
Q  103 agggtgtgtttggattgagggttaggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    |||||||||||||||||||||||||||| |||||||||| ||| | |   |||| ||||||||||||||    
T  40990427 agggtgtgtttggattgagggttaggagaggaagggaggagagagtttgtttttcttttttaaattacg 40990359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 1281149 - 1281212
Alignment:
Q  109 tgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    ||||||||||||||||| |||||||||||||| | ||||| | |||||| ||||||||||||||    
T  1281149 tgtttggattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaattacg 1281212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 109 - 195
Target Start/End: Complemental strand, 36309081 - 36308994
Alignment:
Q  109 tgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 195  Q
    ||||||||| ||||||| |||||||||||||||||||||| | ||||||  | ||||||||||| ||| ||| |||| | ||||||||    
T  36309081 tgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatctttaaattacgtacattgtgaaatatatttttaaa 36308994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 7503205 - 7503131
Alignment:
Q  96 cactcttagggtgtgtttggattgagggttagg-aggggaagggaggggagggctcacttttattttttaaatta 169  Q
    |||| |||||||||||||||||||||| || || |||||| |||||||||||| | ||||||  |||||||||||    
T  7503205 cacttttagggtgtgtttggattgaggctttgggaggggaggggaggggagggtttacttttcgtttttaaatta 7503131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 31543072 - 31543141
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    ||||| ||||||||| ||||||| | |||||||||||||||||||| | ||||||  |||||||||||||    
T  31543072 agggtatgtttggatggagggtttaagaggggaagggaggggagggtttacttttcatttttaaattacg 31543141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 34196556 - 34196492
Alignment:
Q  98 ctcttagggtgtgtttggattgaggg-ttaggaggggaagggaggggagggctcacttttattttt 162  Q
    ||||||||||| |||||||| ||||| ||||||||||||||| |||||||||| |||||| |||||    
T  34196556 ctcttagggtgcgtttggatggagggtttaggaggggaaggg-ggggagggcttacttttcttttt 34196492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 40632994 - 40633051
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcactttta 157  Q
    |||||||||||||| || ||||||| ||||||||||||||| |||||||| |||||||    
T  40632994 ttagggtgtgtttgaatggagggtttaggaggggaagggagaggagggcttactttta 40633051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 170
Target Start/End: Complemental strand, 30365374 - 30365306
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattac 170  Q
    ||||||||||||||| |||| || || |||| ||||||||||||||||  ||||| |||||||||||||    
T  30365374 agggtgtgtttggatggaggatttagaagggtaagggaggggagggcttccttttcttttttaaattac 30365306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 7979138 - 7979209
Alignment:
Q  101 ttagggtgtgtttggattgaggg-ttaggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    ||||| ||||||||||||||||| |||| || ||||||||| |||| | | |||||| ||||||||||||||    
T  7979138 ttaggatgtgtttggattgagggtttagaagaggaagggagaggagagtttacttttcttttttaaattacg 7979209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 24243287 - 24243118
Alignment:
Q  106 gtgtgtttggattgagggttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaag 200  Q
    |||||||||||| |||||||    |||||| ||||||||||||| |||||  |||| ||||||||  ||||| | | || | ||||| ||     |||||    
T  24243287 gtgtgtttggatcgagggtttaagggggaatggaggggagggcttactttccttttctaaattacagacaatatgagatctttttttcaaattaattaag 24243188  T
Q  201 tgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 271  Q
    |||  ||||||||||| ||||||||| |||||| | ||| ||||| |||||||||  ||||||||| ||||    
T  24243187 tgtgattgaagtattatatgatcatttatcatgttattatttcaa-tttttaaaagacattttatagtgtc 24243118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 2482022 - 2481977
Alignment:
Q  98 ctcttagggtgtgtttggattgagggtt-aggaggggaagggaggg 142  Q
    |||||||||| ||||||||| ||||||| |||||||||||||||||    
T  2482022 ctcttagggtatgtttggatggagggtttaggaggggaagggaggg 2481977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 167
Target Start/End: Original strand, 13404976 - 13405041
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaat 167  Q
    |||||||| |||||||||||||| |||||||||||||| |||||   | |||||| ||||||||||    
T  13404976 agggtgtggttggattgagggtttaggaggggaagggatgggagaaattacttttcttttttaaat 13405041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 171
Target Start/End: Complemental strand, 34634387 - 34634318
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    ||||||||||||||| ||| ||| |||||||||||||| | ||||| ||| ||||  |||||||||||||    
T  34634387 agggtgtgtttggatggagagtttaggaggggaagggatgtgagggttcattttttatttttaaattacg 34634318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 38198196 - 38198135
Alignment:
Q  194 aattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaa 255  Q
    ||||||||||  ||||||||||| ||||||||  |||||| ||||| |||||||||| ||||    
T  38198196 aattaagtgtgattgaagtattatatgatcatatatcatgttgttatttcaatttttaaaaa 38198135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 147
Target Start/End: Original strand, 41103504 - 41103549
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggaggg 147  Q
    ||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  41103504 agggtgtgtttggatggagggtttaggaggggaagagaggggaggg 41103549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 167
Target Start/End: Original strand, 11033417 - 11033482
Alignment:
Q  101 ttagggtgtgtttggattgaggg-ttaggaggggaagggaggggagggctcacttttattttttaaat 167  Q
    ||||||||||||||||||||||| |||| || |||||||||||  ||| | |||||| ||||||||||    
T  11033417 ttagggtgtgtttggattgagggtttagaagaggaagggaggg--gggtttacttttcttttttaaat 11033482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 107 - 170
Target Start/End: Complemental strand, 11575646 - 11575582
Alignment:
Q  107 tgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattac 170  Q
    |||||||||||| |||||| |||| | ||||||||||||||| | ||||||  ||||||||||||    
T  11575646 tgtgtttggattcagggtttaggatgagaagggaggggagggtttacttttcatttttaaattac 11575582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 185
Target Start/End: Complemental strand, 16024394 - 16024315
Alignment:
Q  106 gtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 185  Q
    |||||||||||| |||| || |||||||||||||||||||| | | ||||||  ||||||||||||| ||| | |||||||    
T  16024394 gtgtgtttggatggaggatttaggaggggaagggaggggagagtttactttt-ctttttaaattacggacattataaaatg 16024315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 194 - 238
Target Start/End: Original strand, 27487087 - 27487131
Alignment:
Q  194 aattaagtgtttttgaagtattacatgatcattgatcatgctgtt 238  Q
    ||||||||||| ||||||||||| ||||||||| |||||| ||||    
T  27487087 aattaagtgttattgaagtattatatgatcatttatcatgttgtt 27487131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 184
Target Start/End: Complemental strand, 31738669 - 31738585
Alignment:
Q  101 ttagggtgtgtttggattgaggg-ttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaat 184  Q
    ||||||||||||||||| ||||| |||||||||||||  ||||||||| | |  |||  ||||||||||||| ||| | ||||||    
T  31738669 ttagggtgtgtttggatggagggtttaggaggggaagaaaggggagggtttaaatttcatttttaaattacggacactataaaat 31738585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 130; Significance: 3e-67; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 103 - 306
Target Start/End: Original strand, 10204576 - 10204785
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----t 196  Q
    ||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||     |    
T  10204576 agggtgtgtttggatcgagggtttaggaggggaagggaggtgagggctcacttttattttttaaattaccaacaatgtaaaatgtctttttaaaataaat 10204675  T
Q  197 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc 296  Q
    |||||||||||||||||||| ||||||||| || | | ||||||||||||||||||||||||||||| |||||||| ||||||||||||| || |||||     
T  10204676 taagtgtttttgaagtattatatgatcatttattacgttgttaattcaattttttaaaaatcattttttaatgtctgtaaattaaaaaagaaaagtaagt 10204775  T
Q  297 cctcccctcc 306  Q
    ||||||||||    
T  10204776 cctcccctcc 10204785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 103 - 306
Target Start/End: Complemental strand, 15986868 - 15986659
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 196  Q
    ||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||     |||||    
T  15986868 agggtgtgtttggattgagggtttaggaggggaaggaagaggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaaataaat 15986769  T
Q  197 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc 296  Q
    ||||||||||| |||||||| |||||||||    ||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||  ||||     
T  15986768 taagtgtttttaaagtattatatgatcattttaaatgttgttaattcaattttttaaaagtcattttataatgtctgtaaattaaaaaagaaaattaagt 15986669  T
Q  297 cctcccctcc 306  Q
    ||||||||||    
T  15986668 cctcccctcc 15986659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 103 - 331
Target Start/End: Complemental strand, 40305909 - 40305670
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 196  Q
    ||||||||||||||||||||||| |||||| |||||||||||||  |||| |||||||||||||||||||| ||||||||||||| ||||     |||||    
T  40305909 agggtgtgtttggattgagggtttaggaggagaagggaggggagaactcatttttattttttaaattacgaccaatgtaaaatgttttttcaaaataaat 40305810  T
Q  197 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc 296  Q
    |||| |||||||||||| || ||||||||| |||||  ||||||||||||||| ||||||| |||||||||||||| ||| ||||||||| ||  |||||    
T  40305809 taagggtttttgaagtactatatgatcatttatcatattgttaattcaattttctaaaaattattttataatgtctgtaatttaaaaaagaaaactaagc 40305710  T
Q  297 cc-----tcccctcctaaaccctcttcccaaacacaccct 331  Q
    ||     |||||||||||||||||   |||||||||||||    
T  40305709 cctcccttcccctcctaaaccctccatccaaacacaccct 40305670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 105 - 331
Target Start/End: Complemental strand, 8551660 - 8551427
Alignment:
Q  105 ggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaatta 198  Q
    |||||||||||||||| |||| ||||||||||| |||||| || ||||||||||||||||||||||||| ||||||||||||| ||||     |||||||    
T  8551660 ggtgtgtttggattgaaggtttaggaggggaagagagggggggtctcacttttattttttaaattacgagcaatgtaaaatgtgttttaaaaataaatta 8551561  T
Q  199 agtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccc 298  Q
    ||||||||| |||||||| ||||||||| || ||| |||||||| ||||||||||||||||||||||||||||| ||  |||| |||  ||||||| |||    
T  8551560 agtgtttttaaagtattatatgatcatttataatgttgttaatttaattttttaaaaatcattttataatgtctgtagtttaagaaataaatgtaaaccc 8551461  T
Q  299 -tcccctcctaaaccctcttcccaaacacaccct 331  Q
     | ||||  ||||||||||  |||||||||||||    
T  8551460 tttccctattaaaccctctatccaaacacaccct 8551427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 103 - 306
Target Start/End: Complemental strand, 33744437 - 33744228
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----t 196  Q
    ||||||| ||||||||||||||| |||||  |||||||||||||||||||||||||| ||||||||||||||||||  ||||||| ||||||||     |    
T  33744437 agggtgtatttggattgagggtttaggagatgaagggaggggagggctcacttttatattttaaattacgaacaattcaaaatgtttttttaaaataaat 33744338  T
Q  197 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc 296  Q
    ||||||||||||||| | || ||||||||| |||||| |||||||||||||||  ||||||||||||||||||||  ||| ||||||||| || |||| |    
T  33744337 taagtgtttttgaagaaatatatgatcatttatcatgttgttaattcaattttcaaaaaatcattttataatgtccataatttaaaaaagaaaagtaaac 33744238  T
Q  297 cctcccctcc 306  Q
    ||||||||||    
T  33744237 cctcccctcc 33744228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 105 - 306
Target Start/End: Original strand, 34980812 - 34981019
Alignment:
Q  105 ggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaatta 198  Q
    |||||||||||||||| |||| ||||||||||||||||| |||| ||||||||| |||||||||||||||||| ||||||| | ||||     |||||||    
T  34980812 ggtgtgtttggattgaaggtttaggaggggaagggagggaagggttcacttttaatttttaaattacgaacaacgtaaaatatttttttaaaataaatta 34980911  T
Q  199 agtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccc 298  Q
    |||||||||||||||||| || |||||| |||||| |||||| |||||||| || ||||||||||||||||||  ||| ||||||||| || ||||| ||    
T  34980912 agtgtttttgaagtattatataatcatttatcatgttgttaactcaattttctataaatcattttataatgtccataatttaaaaaagaaaagtaagtcc 34981011  T
Q  299 tcccctcc 306  Q
    ||||||||    
T  34981012 tcccctcc 34981019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 103 - 306
Target Start/End: Original strand, 10043252 - 10043461
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----t 196  Q
    ||||||| ||| |||||| |||| | ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |  |||||||     |    
T  10043252 agggtgtatttagattgatggtttatgaggggaagggaggggatgactcacttttattttttaaattacgaacaatgtaaaatattgttttaaaagaaat 10043351  T
Q  197 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc 296  Q
    |||||||||||||||||||| ||||| ||| || ||| ||||||||||||||| |||||||||||||||||| |   ||| ||||||||| || || ||     
T  10043352 taagtgtttttgaagtattatatgattatttataatgttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtgagt 10043451  T
Q  297 cctcccctcc 306  Q
    ||||||||||    
T  10043452 cctcccctcc 10043461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 101 - 285
Target Start/End: Original strand, 21580945 - 21581135
Alignment:
Q  101 ttagggtgtgtttggattgagggtta-ggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taa 194  Q
    ||||||||| ||||||||| |||||  |||| | |||||||||||||| ||||||||||||| |||||||||||||||||||||| | ||||     |||    
T  21580945 ttagggtgtatttggattgggggttttggagagaaagggaggggaggggtcacttttattttctaaattacgaacaatgtaaaatatttttttaaaataa 21581044  T
Q  195 attaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaa 285  Q
    |||||||||||||||||||| | |||| |||| |||||| ||||||||||||||| ||||||| |||| |||| |||  ||| ||||||||    
T  21581045 attaagtgtttttgaagtatcatatgaacatttatcatgttgttaattcaattttctaaaaattatttcataacgtccataatttaaaaaa 21581135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 137 - 256
Target Start/End: Original strand, 5688448 - 5688572
Alignment:
Q  137 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaa-----attaagtgtttttgaagtattacatgatcattgatca 231  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||     |||||||||||||||||||||| || |||||  ||||    
T  5688448 ggaggggagggttcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaatagattaagtgtttttgaagtattatatcatcatcaatca 5688547  T
Q  232 tgctgttaattcaattttttaaaaa 256  Q
    || ||||||||||||||| ||||||    
T  5688548 tgttgttaattcaattttctaaaaa 5688572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 192 - 295
Target Start/End: Original strand, 6382422 - 6382525
Alignment:
Q  192 taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatg 291  Q
    |||||||||| |||||||||||| |||||| |||| |||||| ||||||||||||||| ||||||  |||||||||||||  ||||||| ||||| || |    
T  6382422 taaattaagtctttttgaagtatcacatgaacatttatcatgttgttaattcaattttctaaaaagtattttataatgtccgtaaattagaaaagaaaag 6382521  T
Q  292 taag 295  Q
    ||||    
T  6382522 taag 6382525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 14245083 - 14245177
Alignment:
Q  98 ctcttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 191  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||  | |||||| |||||||||||||| ||| ||| |||||| ||||    
T  14245083 ctctaagggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttttttaaattacggacactgtgaaatgtttttt 14245177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 13634954 - 13634882
Alignment:
Q  104 gggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaaca 175  Q
    |||||||||||||||||||||| |||||||||||||||||||||| | ||||||  |||||||||||||||||    
T  13634954 gggtgtgtttggattgagggtttaggaggggaagggaggggaggggttacttttcatttttaaattacgaaca 13634882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 7544136 - 7544205
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||| | |||| ||||||||||||||    
T  7544136 agggtgtgtttggattgagggtttaggaagggaagggaggggagggctaaattttcttttttaaattacg 7544205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 103 - 167
Target Start/End: Original strand, 13634711 - 13634776
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaat 167  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| | |||||| ||||||||||    
T  13634711 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaat 13634776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 98 - 186
Target Start/End: Complemental strand, 14245295 - 14245206
Alignment:
Q  98 ctcttagggtgtgtttggattgaggg-ttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgt 186  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| |   ||||  ||||||||||||| ||| ||| ||||||    
T  14245295 ctcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcatttttaaattacggacactgtgaaatgt 14245206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 105 - 191
Target Start/End: Complemental strand, 1658055 - 1657968
Alignment:
Q  105 ggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 191  Q
    ||||||||||||| ||||||| |||||||||||||||||||||| | ||||||  ||||||||||||| ||| | |||||||| ||||    
T  1658055 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacggacactataaaatgtttttt 1657968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 144 - 286
Target Start/End: Complemental strand, 6597984 - 6597845
Alignment:
Q  144 agggctcacttttattttttaaattacgaacaatgtaaaatgtctttt----taaattaagtgtttttgaagtattacatgatcattgatcatgctgtta 239  Q
    |||||||| ||||||||||||||||| ||| |||||||||| | ||||    ||||||||||||       |||||| ||||||||| |||||| |||||    
T  6597984 agggctcatttttattttttaaattatgaataatgtaaaatattttttaaaataaattaagtgt-------gtattatatgatcatttatcatgttgtta 6597892  T
Q  240 attcaattttttaaaaatcattttataatgtctttaaattaaaaaag 286  Q
     |||||||||  ||||||||||||| ||||||  ||| |||||||||    
T  6597891 tttcaattttcaaaaaatcattttacaatgtccgtaatttaaaaaag 6597845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 103 - 266
Target Start/End: Original strand, 11436939 - 11437108
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaa------atgtctttttaaa 195  Q
    |||| |||||||||||||||||| ||||||||||||||| |||||||| |||||  |||||||||||||| ||||| || |      || | ||||||||    
T  11436939 agggcgtgtttggattgagggtttaggaggggaagggagaggagggcttactttccttttttaaattacggacaatatatatattttatttatttttaaa 11437038  T
Q  196 ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttata 266  Q
    | ||  ||  ||||||||||| | ||||||| |||  ||||||| || ||||||||||||| |||||||||    
T  11437039 taaac-gtgattgaagtattatacgatcatttatcgcgctgttattttaattttttaaaaaacattttata 11437108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 184
Target Start/End: Complemental strand, 15858988 - 15858902
Alignment:
Q  99 tcttagggtgtgtttggattgagggttagg-aggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaat 184  Q
    |||||||||||||||| ||||||| || || ||| |||||||||||| | ||||| |||||||| |||||||||||||||| |||||    
T  15858988 tcttagggtgtgtttgaattgaggctttgggaggtgaagggaggggatgactcacatttattttctaaattacgaacaatggaaaat 15858902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 295
Target Start/End: Complemental strand, 10043156 - 10043055
Alignment:
Q  194 aattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgta 293  Q
    |||||||||||||| |||||||| ||||||||| |||||| ||||||||||||||| || |||| ||| | |||||| | ||| |||| |||| || |||    
T  10043156 aattaagtgtttttaaagtattatatgatcatttatcatgttgttaattcaattttctagaaataattctttaatgtttataatttaagaaagaaaagta 10043057  T
Q  294 ag 295  Q
    ||    
T  10043056 ag 10043055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 26414893 - 26414962
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||| | ||||||  |||||||||||||    
T  26414893 agggtgtgtttggattgagggtttaggaggagaagggaggggagggtttacttttcgtttttaaattacg 26414962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 10476274 - 10476202
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacga 172  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||| | | |||| || ||||||||||||||    
T  10476274 ttagggtgtgtttggatggagggtttaggaggggaagggaggggagtgtttacttataatttttaaattacga 10476202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 165
Target Start/End: Complemental strand, 2550592 - 2550533
Alignment:
Q  107 tgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaa 165  Q
    ||||||||||||||||||| |||||||||||||||||||||| | |||||| ||||||||    
T  2550592 tgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaa 2550533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 192
Target Start/End: Complemental strand, 14684729 - 14684638
Alignment:
Q  102 tagggtgtgtttggattgaggg-ttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt 192  Q
    ||||||||||||||||| |||| |||||||||| || ||| |||||||| |||||| |||||| |||||||  |||| |||||||| |||||    
T  14684729 tagggtgtgtttggatttagggtttaggaggggcagagagaggagggcttacttttctttttttaattacgggcaatataaaatgttttttt 14684638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 101 - 147
Target Start/End: Original strand, 16938477 - 16938524
Alignment:
Q  101 ttagggtgtgtttggattgaggg-ttaggaggggaagggaggggaggg 147  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16938477 ttagggtgtgtttggattgagggtttaggaggggaagggaggggaggg 16938524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 12036084 - 12036007
Alignment:
Q  192 taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgt 270  Q
    |||||||||||||||| |||||||| ||||| ||| |||||| || |||||||||||| ||| ||| ||||||||||||    
T  12036084 taaattaagtgttttttaagtattatatgataatttatcatgttg-taattcaattttctaataataattttataatgt 12036007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 15986619 - 15986713
Alignment:
Q  98 ctcttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 191  Q
    |||||||||||||||||||  ||||||| ||||||||||||||||||||| || | |||| |||||||| ||||  ||| | ||||||| |||||    
T  15986619 ctcttagggtgtgtttggaaagagggtttaggaggggaagggaggggaggacttaattttcttttttaatttacagacattataaaatgactttt 15986713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 5688639 - 5688590
Alignment:
Q  98 ctcttagggtgtgtttggattgaggg-ttaggaggggaagggaggggagg 146  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  5688639 ctcttagggtgtgtttggattgagggtttaggaggggaagggaagggagg 5688590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 33744191 - 33744260
Alignment:
Q  101 ttagggtgtgtttggattgagggtta-ggaggggaagggaggggagggctcacttttattttttaaatta 169  Q
    ||||||||||||||||| |||||||| || || ||||||||||||||| | |||||| ||||||||||||    
T  33744191 ttagggtgtgtttggatggagggttaaggcggagaagggaggggagggtttacttttcttttttaaatta 33744260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 108 - 191
Target Start/End: Complemental strand, 36363271 - 36363187
Alignment:
Q  108 gtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 191  Q
    |||||||||| ||||||| |||||||||||||||| ||| | ||||||||  ||||||||||||| | | | |||||||||||||    
T  36363271 gtgtttggatggagggtttaggaggggaagggaggagagagttcacttttcatttttaaattacggatactataaaatgtctttt 36363187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 170
Target Start/End: Complemental strand, 10204823 - 10204752
Alignment:
Q  100 cttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattac 170  Q
    |||||||||||||||||  ||| ||| ||||||||||||||||||||| || |||||| |||||||| ||||    
T  10204823 cttagggtgtgtttggaaagagagtttaggaggggaagggaggggaggacttacttttcttttttaatttac 10204752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 34981058 - 34980987
Alignment:
Q  99 tcttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaatta 169  Q
    |||||||||||||||  || ||||||| | ||||||||||||||||||| || |||||| ||||||||||||    
T  34981058 tcttagggtgtgttttaatggagggtttaagaggggaagggaggggaggacttacttttcttttttaaatta 34980987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 10043474 - 10043425
Alignment:
Q  124 ttaggaggggaagggaggggagggctcacttttattttttaaattacgaa 173  Q
    ||||||||  ||||||||||||| ||||||||| ||||||||||||||||    
T  10043474 ttaggaggaaaagggaggggaggactcacttttcttttttaaattacgaa 10043425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 6382357 - 6382393
Alignment:
Q  148 ctcacttttattttttaaattacgaacaatgtaaaat 184  Q
    |||||||||||||||||||| ||||||||||||||||    
T  6382357 ctcacttttattttttaaatcacgaacaatgtaaaat 6382393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 166
Target Start/End: Original strand, 10476026 - 10476090
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaa 166  Q
    |||||||||||| |||||||||| |||||||||||||| | ||||| | |||||| |||||||||    
T  10476026 agggtgtgtttgaattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaa 10476090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 142
Target Start/End: Complemental strand, 20147114 - 20147074
Alignment:
Q  103 agggtgtgtttggattgaggg-ttaggaggggaagggaggg 142  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  20147114 agggtgtgtttggattgagggtttaggaggggaagggaggg 20147074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 284
Target Start/End: Complemental strand, 28279728 - 28279533
Alignment:
Q  96 cactcttagggtgtgtttggattgagggt-taggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt--- 191  Q
    |||||| ||||||||||||||||||| || ||  ||||||||||||| ||||| | ||||||  ||||||||||| | |  || ||| |||| ||||       
T  28279728 cactctaagggtgtgtttggattgagagtctataaggggaagggaggagagggtttacttttcctttttaaattatggaatatataacatgttttttcta 28279629  T
Q  192 ---taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaa 284  Q
       |||| |||||||  ||||||||||| ||||||||| |||||| |  ||  | || |||||||||| ||||| ||||||||  ||| |||||||    
T  28279628 aaataaactaagtgtgattgaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaacatttcataatgtccataatttaaaaa 28279533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 142
Target Start/End: Original strand, 40305667 - 40305710
Alignment:
Q  100 cttagggtgtgtttggattgaggg-ttaggaggggaagggaggg 142  Q
    |||||||||||||||||| ||||| |||||||||||||||||||    
T  40305667 cttagggtgtgtttggatggagggtttaggaggggaagggaggg 40305710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 174
Target Start/End: Original strand, 11756876 - 11756949
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaac 174  Q
    ||||| ||||||||||||||||||| ||||||||| |||| ||||| | |   ||||||||||||||||||||||    
T  11756876 ttaggatgtgtttggattgagggtttaggagggga-gggatgggagagtttgtttttattttttaaattacgaac 11756949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 184
Target Start/End: Original strand, 12035936 - 12036018
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaat 184  Q
    ||||||||||||||| || |||| ||||||||||||||| ||||| ||   |||| |||||||||||| ||||| | ||||||    
T  12035936 agggtgtgtttggatagatggtttaggaggggaagggagaggaggacttgtttttcttttttaaattatgaacattataaaat 12036018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 125
Target Start/End: Complemental strand, 8503079 - 8503051
Alignment:
Q  97 actcttagggtgtgtttggattgagggtt 125  Q
    |||||||||||||||||||||||||||||    
T  8503079 actcttagggtgtgtttggattgagggtt 8503051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 191
Target Start/End: Complemental strand, 11437188 - 11437094
Alignment:
Q  101 ttagggtgtgtttggattgaggg-ttaggaggggaagggaggggag---ggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 191  Q
    ||||||||| ||||||||||||| |||| ||||||||||| |||||   | || |||||| ||||||||| || ||||| | |||||||| ||||    
T  11437188 ttagggtgtttttggattgagggtttagaaggggaagggaagggaggacgacttacttttcttttttaaaataggaacactataaaatgtttttt 11437094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 16502034 - 16501966
Alignment:
Q  105 ggtgtgtttggattgagggtt-aggaggggaagggagggg-agggctcacttttattttttaaattacg 171  Q
    ||||||||||||||||||||| ||||||| ||| |||||| ||   | |||||||||||||||||||||    
T  16502034 ggtgtgtttggattgagggtttaggagggaaagagagggggagaaattacttttattttttaaattacg 16501966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 40815297 - 40815365
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattac 170  Q
    |||||||||||||||||| | || |||||||||||||| | ||||  | |||||| |||||||||||||    
T  40815297 agggtgtgtttggattgaagatttaggaggggaagggaagagaggatttacttttcttttttaaattac 40815365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 42681445 - 42681509
Alignment:
Q  100 cttagggtgtgtttggattgaggg-ttaggaggggaagggaggggagggctcacttttatttttt 163  Q
    |||| ||||||||||||||||||| ||| |||||||| ||||||||||  | |||||| ||||||    
T  42681445 cttaaggtgtgtttggattgagggtttaagaggggaaaggaggggaggatttacttttttttttt 42681509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 122; Significance: 2e-62; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 103 - 306
Target Start/End: Original strand, 33519048 - 33519257
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt-----aaat 196  Q
    |||| |||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||     ||||    
T  33519048 agggagtgtttggatggaggttttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatataaaatgtttttttgaaataaat 33519147  T
Q  197 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc 296  Q
    |||||||||||||||||||| ||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||| ||||| ||| || |||| |    
T  33519148 taagtgtttttgaagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtctgtaatttaaagaagaaaagtaatc 33519247  T
Q  297 cctcccctcc 306  Q
    ||||||||||    
T  33519248 cctcccctcc 33519257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 97 - 271
Target Start/End: Original strand, 37925835 - 37926015
Alignment:
Q  97 actcttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 195  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||    
T  37925835 actctaagggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttattttttaaattacgaacaatgtaaaatgttttttttaa 37925934  T
Q  196 -----ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 271  Q
         ||||||||||||||||||||| || |||||  |||||| ||||||||||||||| |||| ||||||||||||||||    
T  37925935 atagattaagtgtttttgaagtattatatcatcatcaatcatgttgttaattcaattttctaaacatcattttataatgtc 37926015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 103 - 306
Target Start/End: Complemental strand, 36267797 - 36267588
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 196  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||| ||||     || |     
T  36267797 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcatttttattttttaaattacaaccaatgtaaaatgttttttcaaaatatag 36267698  T
Q  197 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc 296  Q
    |||||||||||||||||||| ||||||||| |||||  |||| |||||||||| |||||||||||||||||| ||  ||| ||||||||| ||  |||||    
T  36267697 taagtgtttttgaagtattatatgatcatttatcatattgttgattcaattttctaaaaatcattttataatatccgtaatttaaaaaagaaaactaagc 36267598  T
Q  297 cctcccctcc 306  Q
    ||||||||||    
T  36267597 cctcccctcc 36267588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 101 - 315
Target Start/End: Original strand, 39646467 - 39646687
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taa 194  Q
    |||||||||||||||||||| |||| ||||| |||||||||||||||  ||||||||||||||||||||| |||||||||||||| | ||||     |||    
T  39646467 ttagggtgtgtttggattgacggtttaggagaggaagggaggggaggaatcacttttattttttaaattatgaacaatgtaaaatatatttttaaaataa 39646566  T
Q  195 attaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaa 294  Q
    ||||| |||||||||||||||| || |||||  |||||| ||||||||||||||| |||||||||||||||||||||  ||| ||||||||  || || |    
T  39646567 attaactgtttttgaagtattatatcatcatcaatcatgttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaataaaagtga 39646666  T
Q  295 gccctcccctcctaaaccctc 315  Q
    | | |||||||||||||||||    
T  39646667 gtcatcccctcctaaaccctc 39646687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 101 - 286
Target Start/End: Complemental strand, 28074354 - 28074158
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattt--tttaaattacgaacaatgtaaaatgtctttt------ 191  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||||||| ||||||||||||  ||| ||| |||||||||||||||||| ||||          
T  28074354 ttagggtgtgtttggattgagggtttaggagaggaaggaaggggagggatcacttttatttatttttaatcacgaacaatgtaaaatgttttttgtttta 28074255  T
Q  192 --taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 286  Q
      ||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||||| |||||||||||||||||||||  ||| |||||||||    
T  28074254 aataaattaagtgtttttgaagtattatatgatcatttatcaggttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaag 28074158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 124 - 334
Target Start/End: Original strand, 48013525 - 48013740
Alignment:
Q  124 ttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtgtttttgaagtatt-ac 217  Q
    |||||||||||||||||||||| | || ||||||||||| ||||||||||||||||||||||| ||||||||     |||||||||||||||  ||| |     
T  48013525 ttaggaggggaagggaggggagcgttcgcttttattttt-aaattacgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaaaaattcat 48013623  T
Q  218 atgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcctaaaccctctt 317  Q
    ||||||||| |||||| ||||||||||||||| ||||||| ||||||||| |||| | | ||||||| | || |||||| |||||||||||| |||||      
T  48013624 atgatcatttatcatgttgttaattcaattttctaaaaattattttataaagtctgtgatttaaaaacgaaaagtaagctctcccctcctaatccctcca 48013723  T
Q  318 cccaaacacacccttaa 334  Q
     ||||||||||||||||    
T  48013724 tccaaacacacccttaa 48013740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 100 - 306
Target Start/End: Original strand, 37620771 - 37620983
Alignment:
Q  100 cttagggtgtgtttggattgagggttagg-aggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----ta 193  Q
    |||| ||||||||||||||||||||| || ||||||||||||||||| | ||||||||  |||| |||||| |||||||||||||||  ||||     ||    
T  37620771 cttaaggtgtgtttggattgagggtttgggaggggaagggaggggagagttcactttttattttcaaattatgaacaatgtaaaatgattttttaaaata 37620870  T
Q  194 aattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgta 293  Q
    |||||| |||||||||||||||| || ||| || |||||| || ||||||||||||  ||||||||||||||||||||  ||| ||||||||| || | |    
T  37620871 aattaaatgtttttgaagtattatataatcttttatcatgttgataattcaattttccaaaaatcattttataatgtccataatttaaaaaagaaaagca 37620970  T
Q  294 agccctcccctcc 306  Q
    | |||||||||||    
T  37620971 aaccctcccctcc 37620983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 106 - 301
Target Start/End: Original strand, 35421967 - 35422168
Alignment:
Q  106 gtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaa 199  Q
    ||||||||||||||||| || | |||| ||||||||  || | || | |||||||||||||||||| ||||||||||||||| ||||||||     ||||    
T  35421967 gtgtgtttggattgaggatttaagaggtgaagggagaagatgacttatttttattttttaaattacaaacaatgtaaaatgtttttttaaaataaattaa 35422066  T
Q  200 gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccct 299  Q
    ||||||||||||||| | ||||| ||| || ||| ||||||||||||||| ||||||| |||||||||||||  ||| || |||||| || |||| ||||    
T  35422067 gtgtttttgaagtatcatatgattatttattatgttgttaattcaattttctaaaaattattttataatgtccgtaattttaaaaagaaaagtaaaccct 35422166  T
Q  300 cc 301  Q
    ||    
T  35422167 cc 35422168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 137 - 306
Target Start/End: Complemental strand, 48881768 - 48881593
Alignment:
Q  137 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa------ttaagtgtttttgaagtattacatgatcattgatc 230  Q
    |||||||| || ||||||||| |||||||||||| ||||| ||||||||| ||||||||      |||||| ||||||||| |||| || |||||| |||    
T  48881768 ggaggggaaggttcacttttaatttttaaattacaaacaacgtaaaatgtttttttaaaaataaattaagtatttttgaagcattatataatcatttatc 48881669  T
Q  231 atgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcc 306  Q
    ||| ||||||||||||||| | ||||| |||||||||||||  ||| ||||||||| || ||||||| ||||||||    
T  48881668 atgttgttaattcaattttctgaaaattattttataatgtccgtaatttaaaaaagaaaagtaagccatcccctcc 48881593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 106 - 311
Target Start/End: Original strand, 21857350 - 21857560
Alignment:
Q  106 gtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaa 199  Q
    |||||||||||| || |||| || ||||||||||||  ||| | ||| ||||||||||||||||| ||||||| ||||||   ||||||||     ||||    
T  21857350 gtgtgtttggatcgaaggtttagaaggggaagggagtagagagttcatttttattttttaaattaagaacaatataaaatccttttttaaaataaattaa 21857449  T
Q  200 gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccct 299  Q
    ||||||||||| ||||  ||||||||| |||||| ||||||||||||||| |||||||||||||||||||| |   |||||||| || || ||||| |||    
T  21857450 gtgtttttgaaatattgtatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgt-tcgtaattaaaagagaaaagtaagtcct 21857548  T
Q  300 cccctcctaaac 311  Q
    | ||||||||||    
T  21857549 ctcctcctaaac 21857560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 106 - 306
Target Start/End: Complemental strand, 31364285 - 31364080
Alignment:
Q  106 gtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttt------tattttttaaattacgaacaatgtaaaatgtctttttaaatta 198  Q
    |||||||||||||||||||| ||||||||||||||||  |||| | |||||      |||||||||||||| |||||||||||||||| |||||||| ||    
T  31364285 gtgtgtttggattgagggtttaggaggggaagggagg--agggtttactttattttttattttttaaattaggaacaatgtaaaatgtttttttaaaata 31364188  T
Q  199 a---gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaag 295  Q
    |   ||||||||||||||||| ||||||||   | |||  ||| |||||||||| | |||||||||||||||||||  ||| ||| ||||| || |||||    
T  31364187 agttgtgtttttgaagtattatatgatcat---ttatgtcgttgattcaattttcttaaaatcattttataatgtccgtaatttagaaaagaaaagtaag 31364091  T
Q  296 ccctcccctcc 306  Q
    | |||||||||    
T  31364090 ctctcccctcc 31364080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 104 - 249
Target Start/End: Complemental strand, 12671079 - 12670928
Alignment:
Q  104 gggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaatt 197  Q
    ||||||||||||||||||| || ||||| | ||  ||||| | | ||||||||||||||||||| |||||||||||| |||||| ||||     | ||||    
T  12671079 gggtgtgtttggattgaggttttaggagtgaaacagagggaaagactcacttttattttttaaactacgaacaatgtgaaatgttttttgtaaatgaatt 12670980  T
Q  198 aagtgtttttgaagtattacatgatcattgatcatgctgttaattcaatttt 249  Q
    ||||||||||||||||||| ||||||||| |||||| |||||||||||||||    
T  12670979 aagtgtttttgaagtattatatgatcatttatcatgttgttaattcaatttt 12670928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 101 - 277
Target Start/End: Original strand, 8122142 - 8122328
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taa 194  Q
    |||||||||||||| ||||||  || |||||| |||||||||||| | ||||||||||||||||||||||||||| || |||||| |  |||     |||    
T  8122142 ttagggtgtgtttgaattgagaatttaggaggagaagggaggggaagactcacttttattttttaaattacgaaccatataaaatattgttttaaaataa 8122241  T
Q  195 attaagtgtttttgaagt----attacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaa 277  Q
    ||||| ||||||||||||    |||| ||||| ||| |||||  ||||||||||||||| ||||||| |||||||||||||| ||||    
T  8122242 attaattgtttttgaagtattaattatatgataatttatcatcttgttaattcaattttctaaaaattattttataatgtctataaa 8122328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 116 - 284
Target Start/End: Original strand, 48015224 - 48015394
Alignment:
Q  116 attgagggttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt------aaattaagtgtttttga 209  Q
    ||||||| ||| || ||||||||||||||| | || ||||||| |||||||||||    |||||||||||| |||||      |||||||||||||||||    
T  48015224 attgaggtttacgaagggaagggaggggagcgttcgcttttatcttttaaattac----aatgtaaaatgtttttttttaaataaattaagtgtttttga 48015319  T
Q  210 agtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaa 284  Q
    |  |||| ||||||||| |||||| |||||||||||||||  |||||| ||||||||| |||| ||| |||||||    
T  48015320 aaaattatatgatcatttatcatgttgttaattcaattttccaaaaattattttataaagtctgtaatttaaaaa 48015394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 193 - 331
Target Start/End: Complemental strand, 23116408 - 23116269
Alignment:
Q  193 aaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatca-ttttataatgtctttaaattaaaaaaggaatg 291  Q
    |||||||||||  ||||||||||| || |||||| |||||| || || ||||||||||||| || || ||||||| ||||| ||| ||||||||| || |    
T  23116408 aaattaagtgtgattgaagtattatataatcatttatcatgttgctatttcaattttttaataaacacttttatagtgtctgtaatttaaaaaagaaaag 23116309  T
Q  292 taagccctcccctcctaaaccctcttcccaaacacaccct 331  Q
    ||||||||||| ||||||||||||   |||||||||||||    
T  23116308 taagccctcccttcctaaaccctccatccaaacacaccct 23116269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 158 - 267
Target Start/End: Complemental strand, 3216048 - 3215934
Alignment:
Q  158 ttttttaaattacgaacaatgtaaaatgtctttt-----taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaatttttta 252  Q
    |||||||||||| |||||||||||||||| ||||     ||||| |||| ||| |||||||||| ||||||||| |||||  ||||||||||||||| ||    
T  3216048 ttttttaaattatgaacaatgtaaaatgttttttcaaaataaatcaagtatttatgaagtattatatgatcatttatcatattgttaattcaattttcta 3215949  T
Q  253 aaaatcattttataa 267  Q
    |||||||||||||||    
T  3215948 aaaatcattttataa 3215934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 216
Target Start/End: Complemental strand, 12682972 - 12682854
Alignment:
Q  104 gggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaatt 197  Q
    ||||||||||||||||||| || ||||| | ||  ||||| | ||||||||||||||||||||| ||||||||||||||||||| ||||     ||||||    
T  12682972 gggtgtgtttggattgaggttttaggagcgaaacagagggaaaggctcacttttattttttaaactacgaacaatgtaaaatgtattttttaaataaatt 12682873  T
Q  198 aagtgtttttgaagtatta 216  Q
    |||||||||||||||||||    
T  12682872 aagtgtttttgaagtatta 12682854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 105 - 269
Target Start/End: Original strand, 16833684 - 16833867
Alignment:
Q  105 ggtgtgtttggattgagggtt-aggaggggaagggagggg-aggg-ctcacttttattttttaaattacgaacaatgtaaaatgtcttttt--------- 192  Q
    ||||||||||||||||||||| | ||||| |||||| | | || | || |||||||||||||||||||||||||||||||||||| |||||             
T  16833684 ggtgtgtttggattgagggtttaagagggaaagggatgagtagagacttacttttattttttaaattacgaacaatgtaaaatgtttttttttttttttt 16833783  T
Q  193 -------aaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatg 269  Q
           |||||||||||||||||||||||||||||||||| |||||| | ||||||||||||| ||||||| || ||||||||    
T  16833784 taaaaaaaaattaagtgtttttgaagtattacatgatcatttatcatgttattaattcaattttataaaaattatattataatg 16833867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 148 - 286
Target Start/End: Original strand, 3143526 - 3143673
Alignment:
Q  148 ctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtgtttttgaagtattacatgatcattgatcatgctg----tt 238  Q
    |||| |||| ||||||||||||  ||||||||||||| | ||| ||||     |||||| |||||||||||||| ||||||||| |||||  ||    ||    
T  3143526 ctcaatttttttttttaaattataaacaatgtaaaatatttttataaaataaattaagtttttttgaagtattatatgatcatttatcattttgttaatt 3143625  T
Q  239 aattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 286  Q
    ||||||||||||||||||| ||||||||||||| |||| |||||||||    
T  3143626 aattcaattttttaaaaattattttataatgtcattaatttaaaaaag 3143673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 36267549 - 36267622
Alignment:
Q  99 tcttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||| | |||| ||||||||||||||    
T  36267549 tcttagggtgtgtttggatggagggtttaggaggggaagggaggggagggcttagttttcttttttaaattacg 36267622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 103 - 171
Target Start/End: Complemental strand, 39856109 - 39856040
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| | |||||| ||||||||||||||    
T  39856109 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacg 39856040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 48881556 - 48881640
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaat 184  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||| |||| |||||| |||||||||||||| ||| | ||||||    
T  48881556 ttagggtgtgtttggatggagggtttaggaggggaagggaggggatggcttacttttcttttttaaattacggacattataaaat 48881640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 103 - 185
Target Start/End: Original strand, 28074103 - 28074186
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 185  Q
    |||||||||||||||||| |||| ||||||||||||||||||||  ||||||||| |||||||||||||| ||| | |||||||    
T  28074103 agggtgtgtttggattgaaggtttaggaggggaagggaggggagaactcacttttcttttttaaattacggacattataaaatg 28074186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 101 - 195
Target Start/End: Original strand, 47390853 - 47390948
Alignment:
Q  101 ttagggtgtgtttggattgaggg-ttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 195  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||| | |||||| |||||||||||| |||| || ||| |||| ||| ||||    
T  47390853 ttagggtgtgtttggattgaggggttaggaggggaagggagtggagggtttacttttcttttttaaattatgaactatataacatgtttttctaaa 47390948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 206 - 302
Target Start/End: Complemental strand, 30592388 - 30592292
Alignment:
Q  206 ttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctccc 302  Q
    ||||||||||| ||||| ||| |||||    ||| |||||||||||||||||||||||||| ||||| ||| ||||||||| || ||||||||||||    
T  30592388 ttgaagtattatatgattatttatcatatgattatttcaattttttaaaaatcattttatagtgtctgtaatttaaaaaagaaaagtaagccctccc 30592292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 100 - 170
Target Start/End: Complemental strand, 33519295 - 33519224
Alignment:
Q  100 cttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattac 170  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||| | |||||| || ||||||||||    
T  33519295 cttagggtgtgtttggatggagggtttaggaggggaagggaggggagggattacttttcttctttaaattac 33519224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 195
Target Start/End: Complemental strand, 18795843 - 18795746
Alignment:
Q  98 ctcttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 195  Q
    ||||||| |||||||||||||||| ||| || ||||||||| |||||| ||||   |||| |||||||||||||||||||| |||||||| ||||||||    
T  18795843 ctcttagagtgtgtttggattgagagtttagaaggggaagg-aggggaaggcttgattttcttttttaaattacgaacaatataaaatgtttttttaaa 18795746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 103 - 174
Target Start/End: Complemental strand, 1051742 - 1051670
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaac 174  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||  | | |||| |||||||||||||||||    
T  1051742 agggtgtgtttggattgagggtttaggaggggaagggaggagaggatttatttttcttttttaaattacgaac 1051670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 31571713 - 31571645
Alignment:
Q  104 gggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    |||||||||||||||||||||| ||||||||||| |||||||| | | |||||| ||||||||||||||    
T  31571713 gggtgtgtttggattgagggtttaggaggggaagcgaggggagagtttacttttcttttttaaattacg 31571645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 41496949 - 41497032
Alignment:
Q  95 acactcttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaat 177  Q
    |||| |||||||||||||||||| ||||||| ||||||||||||||||||| |  | ||||||  ||||||||||||| |||||    
T  41496949 acacccttagggtgtgtttggatggagggtttaggaggggaagggaggggatgatttactttttatttttaaattacggacaat 41497032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 192 - 295
Target Start/End: Complemental strand, 2087892 - 2087785
Alignment:
Q  192 taaattaagtgtttttgaagtattacatgatca----ttgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaagg 287  Q
    |||||| | |||||||||||||||| |||||||    || |||||| |||||||||| |||||||||||| |||||||||| ||  ||| |||||||||     
T  2087892 taaatttaatgtttttgaagtattatatgatcaattatttatcatgttgttaattcatttttttaaaaattattttataatatccgtaatttaaaaaaga 2087793  T
Q  288 aatgtaag 295  Q
    || |||||    
T  2087792 aaagtaag 2087785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 33655354 - 33655216
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttt-----ttaa 194  Q
    |||| |||||||||||||||||||| ||||||||||| |||| ||||| | |||||| |||||||||||| |  | || ||| |||| |||      |||    
T  33655354 ttagagtgtgtttggattgagggtttaggaggggaagagaggcgagggtttacttttcttttttaaattatgggctatataacatgtttttctaaaataa 33655255  T
Q  195 attaagtgtttttgaagtattacatgatcattgatcatg 233  Q
    |||||||||  ||||||||||| ||||||||| ||||||    
T  33655254 attaagtgtgattgaagtattatatgatcatttatcatg 33655216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 195
Target Start/End: Complemental strand, 13771190 - 13771097
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 195  Q
    ||||||||||| ||||||||||| |||||||||||||||| ||| | | ||||||  ||||||||||||| || || ||| |||| ||||||||    
T  13771190 agggtgtgtttagattgagggtttaggaggggaagggaggtgagagtttacttttcgtttttaaattacggactatataacatgtttttttaaa 13771097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 31553183 - 31553243
Alignment:
Q  101 ttagggtgtgtttggattgagggttaggaggggaagggaggggagggctcacttttattttt 162  Q
    ||||||||||||||||| |||| |||||||||||||||||| ||||| ||||||||| ||||    
T  31553183 ttagggtgtgtttggatggaggtttaggaggggaagggaggagaggg-tcacttttaatttt 31553243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 4833531 - 4833599
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattac 170  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||| | ||||||  ||||||||||||    
T  4833531 agggtatgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattac 4833599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 13770946 - 13771030
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaat 184  Q
    |||||||||||||||||||||| || |||||||||||||||||||||  | |||| |  ||||||||||||| ||| | ||||||    
T  13770946 ttagggtgtgtttggattgaggatttaggaggggaagggaggggaggatttacttattatttttaaattacggacactataaaat 13771030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 168
Target Start/End: Original strand, 40282192 - 40282263
Alignment:
Q  98 ctcttagggtgtgtttggattgaggg-ttaggaggggaagggaggggagggctcacttttattttttaaatt 168  Q
    |||||||||| ||||||||||||||| ||||||||||||||||| |||||| |   |||| |||||||||||    
T  40282192 ctcttagggtatgtttggattgagggtttaggaggggaagggagaggagggtttgattttcttttttaaatt 40282263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 25887190 - 25887236
Alignment:
Q  101 ttagggtgtgtttggattgaggg-ttaggaggggaagggaggggagg 146  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  25887190 ttagggtgtgtttggattgagggtttatgaggggaagggaggggagg 25887236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 186
Target Start/End: Original strand, 40196530 - 40196616
Alignment:
Q  101 ttagggtgtgtttggattgagggttagg-aggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgt 186  Q
    ||||||||||||||||| ||||||| || |||||||||||| |||||| | ||||||  ||||| ||||||| ||| | ||||||||    
T  40196530 ttagggtgtgtttggatggagggtttgggaggggaagggagaggagggtttacttttcatttttgaattacggacactataaaatgt 40196616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 48147462 - 48147404
Alignment:
Q  124 ttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaa 182  Q
    ||||||||| ||| |||| ||| |||||||||||||||||||||||| || ||||||||    
T  48147462 ttaggagggaaagagaggagagagctcacttttattttttaaattacaaataatgtaaa 48147404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 4835479 - 4835548
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    ||||||||||| ||||||||||| ||||| | |||||||||| | ||| |||||| ||||||||||||||    
T  4835479 agggtgtgtttagattgagggtttaggagagaaagggaggggtgtgcttacttttcttttttaaattacg 4835548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 333
Target Start/End: Original strand, 17852966 - 17853106
Alignment:
Q  192 taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatg 291  Q
    ||||||||||||  |||| |||||| |||||| || |||||| ||||| || |  |||||||||| | ||| ||| ||    ||| ||||||| | || |    
T  17852966 taaattaagtgtgattgaggtattatatgatcgtttatcatgttgttattttatctttttaaaaa-cttttcatagtgctcgtaatttaaaaatgaaaag 17853064  T
Q  292 taagccctcccctcctaaaccctcttcccaaacacaccctta 333  Q
    ||||||||||||||||||||||||   |||||||||||||||    
T  17853065 taagccctcccctcctaaaccctccatccaaacacaccctta 17853106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 175
Target Start/End: Complemental strand, 18231830 - 18231757
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaaca 175  Q
    ||||||||||||||| ||| ||| |||||||||||||||||||||  | ||||||  |||||||||||| ||||    
T  18231830 agggtgtgtttggatggagcgtttaggaggggaagggaggggaggatttacttttcatttttaaattacaaaca 18231757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 30592253 - 30592321
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattac 170  Q
    ||||||| ||||||| |||| || ||||||| |||||| ||||||||| |||||| |||||||||||||    
T  30592253 agggtgtatttggatggaggatttaggagggaaagggaagggagggcttacttttcttttttaaattac 30592321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 34228569 - 34228494
Alignment:
Q  97 actcttagggtgtgtttggattg-agggttaggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    |||||||||||||||||| |||| ||| |||||||| ||||||||||||||  | ||||||  |||| ||||||||    
T  34228569 actcttagggtgtgtttgaattgaaggtttaggaggagaagggaggggaggatttacttttcattttaaaattacg 34228494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 131 - 233
Target Start/End: Complemental strand, 41497172 - 41497065
Alignment:
Q  131 gggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttt-----ttaaattaagtgtttttgaagtattacatgatcat 225  Q
    ||||||||||||||||| | |||||| |||||||||||||| || || ||| |||| |||      ||||||||||||  |||||| |||| ||||||||    
T  41497172 gggaagggaggggagggtttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagaattatatgatcat 41497073  T
Q  226 tgatcatg 233  Q
    | ||||||    
T  41497072 ttatcatg 41497065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 31364070 - 31364128
Alignment:
Q  127 ggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 185  Q
    ||||||||||||||||||| ||| |||||| |||| ||||||||| ||| | |||||||    
T  31364070 ggaggggaagggaggggagagcttacttttcttttctaaattacggacattataaaatg 31364128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 185
Target Start/End: Complemental strand, 37926063 - 37926002
Alignment:
Q  124 ttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 185  Q
    |||||| |||||||||||||||| |||| |||| |||| ||||||||| ||| | |||||||    
T  37926063 ttaggaagggaagggaggggaggactcatttttcttttctaaattacggacattataaaatg 37926002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 43230232 - 43230305
Alignment:
Q  99 tcttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    |||||| |||||||||||||| ||||| | ||| | |||| ||||||||| | |||||| ||||||||||||||    
T  43230232 tcttagtgtgtgtttggattgggggtttaagagagaaaggaaggggagggtttacttttcttttttaaattacg 43230305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 185
Target Start/End: Complemental strand, 39646678 - 39646630
Alignment:
Q  137 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 185  Q
    |||||||| | |||||||||||||||||||||||| ||| | |||||||    
T  39646678 ggaggggatgactcacttttattttttaaattacggacattataaaatg 39646630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 170
Target Start/End: Complemental strand, 48015451 - 48015383
Alignment:
Q  103 agggtgtgtttggattgaggg-ttaggaggggaagggaggggagggctcacttttattttttaaattac 170  Q
    ||||| ||||||||| ||||| |||||||||||||||||  ||| ||| ||||||  ||||||||||||    
T  48015451 agggtttgtttggatggagggattaggaggggaagggagatgagagcttacttttcgtttttaaattac 48015383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 121; Significance: 7e-62; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 137 - 334
Target Start/End: Original strand, 8182 - 8390
Alignment:
Q  137 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaa-----attaagtgtttttgaagtattacatgatcattgatca 231  Q
    |||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||     ||||| |||||||||||||||| ||||||||| ||||    
T  8182 ggagaggagagctcacttttattttttaaattacgaacaatgtgaaatgtctttttaagataaattaactgtttttgaagtattatatgatcattaatca 8281  T
Q  232 tgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaag-----ccctcccctcctaaaccctcttccc-aaaca 325  Q
    || ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||     |||||||||||||||| |||||||| |||||    
T  8282 tgttgttaattcaattttttaaaaataattttataacgtctttaaattaaaaaaggaatgtaagccctcccctcccctcctaaactctcttccctaaaca 8381  T
Q  326 cacccttaa 334  Q
    |||||||||    
T  8382 cacccttaa 8390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 4e-57; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 101 - 306
Target Start/End: Complemental strand, 1085736 - 1085524
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa---- 195  Q
    ||||||||||||||||| ||||||| |||||||||||||||| || | ||||||||||||||||||||||||||| ||||||||||| ||||||||        
T  1085736 ttagggtgtgtttggatagagggtttaggaggggaagggaggagatgactcacttttattttttaaattacgaaccatgtaaaatgtttttttaaaataa 1085637  T
Q  196 -ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaagg-aatgta 293  Q
     ||||||||||||||||||||| ||||||||| |||||||||||| ||||||||| ||||||||||||| |||||||  ||| |||||||||| || |||    
T  1085636 attaagtgtttttgaagtattatatgatcatttatcatgctgttagttcaattttctaaaaatcattttctaatgtccgtaatttaaaaaaggaaaagta 1085537  T
Q  294 agccctcccctcc 306  Q
    || ||||||||||    
T  1085536 agtcctcccctcc 1085524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 99 - 329
Target Start/End: Original strand, 33643264 - 33643499
Alignment:
Q  99 tcttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----t 192  Q
    ||||||||||||||| |||||| |||| |||||||||||||| |||| | |||||||||||||||||||||||||| |||||||||||| ||||     |    
T  33643264 tcttagggtgtgtttagattgaaggtttaggaggggaagggaagggatgactcacttttattttttaaattacgaaaaatgtaaaatgtttttttaaaat 33643363  T
Q  193 aaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgt 292  Q
    |||||||||||||||||||||||| ||||||||| |||||  | ||||||||||||| |||||||||||||| |||||   ||| ||||||||| ||| |    
T  33643364 aaattaagtgtttttgaagtattatatgatcattcatcatattattaattcaattttctaaaaatcattttaaaatgttcataatttaaaaaagaaat-t 33643462  T
Q  293 aagccctcccctcctaaaccctcttcccaaacacacc 329  Q
    ||   |||||||||||||||||||  |||||||||||    
T  33643463 aaattctcccctcctaaaccctctatccaaacacacc 33643499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 103 - 286
Target Start/End: Original strand, 35927814 - 35928001
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt----taaatt 197  Q
    |||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||   | || |    ||||||    
T  35927814 agggtgtgtttggattgaggttttaggaggggaatggaggggagggctcacatttattttttaaattatgaacaatgtaaatatttttctaaaataaatt 35927913  T
Q  198 aagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 286  Q
    |||| |||||||||||||| ||||||||| |||||| ||||||||||||||| | ||||| |||||||||  ||| ||| |||||||||    
T  35927914 aagtatttttgaagtattatatgatcatttatcatgttgttaattcaattttct-aaaattattttataaaatctgtaatttaaaaaag 35928001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 106 - 306
Target Start/End: Complemental strand, 40709532 - 40709327
Alignment:
Q  106 gtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaa 199  Q
    ||||||||||||||||| || |||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||| || ||||      |||||||    
T  40709532 gtgtgtttggattgaggatttaggaggggaacggaggggaggg-tcacttttattttttaaattatgaacaatgtaaaaggttttttaaaaagaaattaa 40709434  T
Q  200 gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccct 299  Q
    ||||||||||||||||| ||||||||| |||||   ||||||| |||||| ||||||| |||||||||| |   ||| ||||||||| || ||||| |||    
T  40709433 gtgtttttgaagtattatatgatcatttatcatatcgttaatttaattttctaaaaattattttataatattcgtaatttaaaaaagaaaagtaagtcct 40709334  T
Q  300 cccctcc 306  Q
    || ||||    
T  40709333 cctctcc 40709327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 130 - 334
Target Start/End: Original strand, 47071079 - 47071288
Alignment:
Q  130 ggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtgtttttgaagtattacatgatca 224  Q
    ||||||||||||| |  | ||| ||||||||| |||||||||| ||||||||||||| |||| |||     ||||||||||||||| ||||  |||||||    
T  47071079 ggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaaatattttatgatca 47071178  T
Q  225 ttgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcctaaaccctcttcccaaac 324  Q
    || |||||| |||||||| |||||| |||||||||||||||||||||  ||| ||||||||| || || || | |||| |||||||||||    ||||||    
T  47071179 tttatcatgttgttaattaaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaagttagtcttcccttcctaaacccttcatccaaac 47071278  T
Q  325 acacccttaa 334  Q
    ||||||||||    
T  47071279 acacccttaa 47071288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 151 - 305
Target Start/End: Original strand, 25268313 - 25268472
Alignment:
Q  151 acttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaa 245  Q
    |||||||| |||||||||  |||||||||||||||| ||||||||     ||||||||||||||||||||| ||||||||| |||| | |||| ||| ||    
T  25268313 acttttatattttaaattttgaacaatgtaaaatgtatttttaaaataaattaagtgtttttgaagtattatatgatcatttatcacgttgttgattaaa 25268412  T
Q  246 ttttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctc 305  Q
    |||| |||||||||||||||||| ||  ||| |||||||||||| |||| ||||||||||    
T  25268413 ttttctaaaaatcattttataatttccgtaatttaaaaaaggaaagtaaaccctcccctc 25268472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 139 - 286
Target Start/End: Original strand, 2506576 - 2506728
Alignment:
Q  139 aggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaagtgtttttgaagtattacatgatcattgatcatg 233  Q
    ||||||||| ||| |||||| ||||||||||||| |||| |||||||| ||||     ||||||||||||||||||||||||| ||||||||| || ||     
T  2506576 aggggagggttcatttttatcttttaaattacgaccaatataaaatgttttttcaaaataaattaagtgtttttgaagtattatatgatcatttattata 2506675  T
Q  234 ctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 286  Q
     ||||||||| ||||||||||||| |||||||||| ||| ||| |||||||||    
T  2506676 ttgttaattcgattttttaaaaattattttataatatctgtaatttaaaaaag 2506728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 132 - 264
Target Start/End: Complemental strand, 51303600 - 51303461
Alignment:
Q  132 ggaagggaggggagggctcactttt-attttttaaattacgaacaatgtaaaatgtcttttt------aaattaagtgtttttgaagtattacatgatca 224  Q
    |||||||| ||||||||||| |||| |||||||||||||||||||||||||||  | |||||      |||||||||||||||||||||||| |||||||    
T  51303600 ggaagggaagggagggctcattttttattttttaaattacgaacaatgtaaaacattttttttaaaataaattaagtgtttttgaagtattatatgatca 51303501  T
Q  225 ttgatcatgctgttaattcaattttttaaaaatcatttta 264  Q
    || |||||| |||||||||||||||  |||||||||||||    
T  51303500 tttatcatgttgttaattcaattttaaaaaaatcatttta 51303461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 101 - 310
Target Start/End: Complemental strand, 525346 - 525133
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt------ta 193  Q
    ||||||||||||||||||||||||| |||| ||||||||| || || | ||||||||| |||||||||||| ||||| ||||||||| ||||      ||    
T  525346 ttagggtgtgtttggattgagggtttaggacgggaagggaaggaagagttcacttttaatttttaaattacaaacaacgtaaaatgttttttttaaaata 525247  T
Q  194 aattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgta 293  Q
    |||||||| | |||||||||||| || |||||| |||||  ||||||||||| ||| ||||||| ||||||| |||||  ||| ||||||||| || |||    
T  525246 aattaagtttgtttgaagtattatataatcatttatcatattgttaattcaa-tttctaaaaattattttat-atgtccgtaatttaaaaaagaaaagta 525149  T
Q  294 agccctcccctcctaaa 310  Q
    |  ||||||||||||||    
T  525148 a-tcctcccctcctaaa 525133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 103 - 185
Target Start/End: Original strand, 51303384 - 51303467
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 185  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  51303384 agggtgtgtttggattgagggtttaggaggggaggggaggggagggctcacttttattttttatattaccaacaatgtaaaatg 51303467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 145 - 332
Target Start/End: Original strand, 1344592 - 1344783
Alignment:
Q  145 gggctcacttttattttttaaattacgaacaatgtaaaatgtctttt----taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaa 240  Q
    |||||||||||||||||||||||||| ||||||| ||||||| ||||     ||||||||||||||||| ||| || ||| | ||| |||||| ||||      
T  1344592 gggctcacttttattttttaaattacaaacaatgcaaaatgttttttaaaaaaaattaagtgtttttgatgtaatatatgtttatttatcatgttgttgg 1344691  T
Q  241 ttcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcctaaaccctcttcccaaacacaccctt 332  Q
    ||||||||| |||||||||||||| ||||||  ||| ||||||||| ||  |||    |||||||||||||||||   ||||||||| ||||    
T  1344692 ttcaattttctaaaaatcattttacaatgtccgtaatttaaaaaagaaaaataaattttcccctcctaaaccctccatccaaacacatcctt 1344783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 35512909 - 35513006
Alignment:
Q  209 aagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcc 306  Q
    |||||||| ||||||||| |||||| ||||||||||||||| |||||||||||||||||||||  ||| ||||||||  || ||||||||||||||||    
T  35512909 aagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtccataatttaaaaaataaaagtaagccctcccctcc 35513006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 111 - 271
Target Start/End: Complemental strand, 13387163 - 13386989
Alignment:
Q  111 tttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt-------------aaat 196  Q
    ||||||||||||||| ||||||| ||| ||| ||||| |||| |||||||||||||||||| ||||||| ||||||| |||||             ||||    
T  13387163 tttggattgagggtttaggagggaaagagagtggaggactcatttttattttttaaattacaaacaatgaaaaatgttttttttttttttataaataaat 13387064  T
Q  197 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 271  Q
    |||||||||||   |||||| ||||||||| |||||| ||||||||||||||| |||||||| |||||| |||||    
T  13387063 taagtgttttttgtgtattatatgatcatttatcatgttgttaattcaattttctaaaaatcgttttatgatgtc 13386989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 103 - 254
Target Start/End: Original strand, 17622536 - 17622694
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatg------taaaatgtctttttaaa 195  Q
    |||||||||||||||| |||||| |||||||||||  | |||||| ||||||||||||||||||| |||||||||||      |||||     |  ||||    
T  17622536 agggtgtgtttggattaagggttcaggaggggaagcaatgggaggactcacttttattttttaaactacgaacaatgtaattttaaaaaaaaataataaa 17622635  T
Q  196 ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaa 254  Q
    ||||||||||| ||||||||| ||||||| | |||||| | ||||||||||||||||||    
T  17622636 ttaagtgttttagaagtattatatgatcacttatcatgttattaattcaattttttaaa 17622694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 195
Target Start/End: Complemental strand, 23536924 - 23536839
Alignment:
Q  111 tttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 195  Q
    |||||||||||| || | |||||||||||||||||||||||| ||||||||||||||| | || ||||||||||||| ||||||||    
T  23536924 tttggattgaggatttatgaggggaagggaggggagggctcatttttattttttaaataatgatcaatgtaaaatgtttttttaaa 23536839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 271
Target Start/End: Complemental strand, 40287467 - 40287325
Alignment:
Q  137 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt--------aaattaagtgtttttgaagtattacatgatcattga 228  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||| | | |||        |||||||||||||||||||||||| || |||||| |    
T  40287467 ggaggggagagctcacttttattttttaaactacgaactatgtaaaatatatatttttttaaataaattaagtgtttttgaagtattatataatcattta 40287368  T
Q  229 tcatgctgttaattcaattttttaaaaatcattttataatgtc 271  Q
    | ||  ||||||||||||||| ||||| |||||| | ||||||    
T  40287367 tgattttgttaattcaattttctaaaactcatttcacaatgtc 40287325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 100 - 271
Target Start/End: Original strand, 20607220 - 20607390
Alignment:
Q  100 cttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt------- 191  Q
    ||||||||||||||| |||||||||| ||||||||||||||     |||||||||||||||||||||||||   ||||||| |||||| ||||           
T  20607220 cttagggtgtgtttgaattgagggtttaggaggggaaggga-----gggctcacttttattttttaaatta--tacaatgt-aaatgtttttttttttta 20607311  T
Q  192 --taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 271  Q
      ||||||||||||||||||||||||| ||||| ||  ||||   |||||||| ||||||  ||||||||||||||||||||    
T  20607312 aataaattaagtgtttttgaagtattatatgataatatatca---tgttaatttaattttcaaaaaatcattttataatgtc 20607390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 35513037 - 35512974
Alignment:
Q  107 tgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaatta 169  Q
    ||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  35513037 tgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttattttttaaatta 35512974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 101 - 191
Target Start/End: Original strand, 38509892 - 38509983
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 191  Q
    ||||||||||||||||| ||||||| ||||||||||||||| |||||| ||||||||  ||||||||||||| ||| | | |||||||||||    
T  38509892 ttagggtgtgtttggatagagggtttaggaggggaagggagaggagggttcacttttcatttttaaattacggacactatgaaatgtctttt 38509983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 12234010 - 12234079
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||| | |||| ||||||||||||||    
T  12234010 agggtgtgtttggattgagggtttaggaggggaagggagggtagggcttaattttcttttttaaattacg 12234079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 100 - 223
Target Start/End: Original strand, 30010329 - 30010458
Alignment:
Q  100 cttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttt-----tta 193  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||  | |||||| || ||||||||||| || || ||| |||| |||      ||    
T  30010329 cttagggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttgtttaaattacggactatataacatgtttttctaaaata 30010428  T
Q  194 aattaagtgtttttgaagtattacatgatc 223  Q
    ||||||||||  ||||||||||| ||||||    
T  30010429 aattaagtgtggttgaagtattatatgatc 30010458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 40094927 - 40095002
Alignment:
Q  97 actcttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    ||||||||||||||||||||| ||||||| |||||||||||| ||||||||| | ||||||  |||||||||||||    
T  40094927 actcttagggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttacttttcatttttaaattacg 40095002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 2859169 - 2859107
Alignment:
Q  110 gtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    ||||||||||| |||| |||||||||||||||||||||| | |||||||||||||||||||||    
T  2859169 gtttggattgaaggtttaggaggggaagggaggggagggtttacttttattttttaaattacg 2859107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 256
Target Start/End: Original strand, 52707691 - 52707803
Alignment:
Q  148 ctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaatt 242  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||     ||||||| || |||||||||||||| || |||||| |||||| |||| |||    
T  52707691 ctcacttttattttttaaactacaaacaatgtaaaatgttttttaaaaataaattatgtatttttgaagtattatatcatcatttatcatgttgtt-att 52707789  T
Q  243 caattttttaaaaa 256  Q
     ||||||| |||||    
T  52707790 aaatttttaaaaaa 52707803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 103 - 174
Target Start/End: Original strand, 41498404 - 41498476
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaac 174  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| | ||||||  ||||||||||| ||||    
T  41498404 agggtgtgtttggattgagggtttaggaggggaagtgaggggagggtttacttttcgtttttaaattatgaac 41498476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 35349708 - 35349637
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    |||||||||||||||||| |||||| | |||||||||||||||||||| | ||||||  |||||||||||||    
T  35349708 ttagggtgtgtttggattaagggtttatgaggggaagggaggggagggtttacttttcgtttttaaattacg 35349637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 147
Target Start/End: Original strand, 26324014 - 26324059
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggaggg 147  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  26324014 agggtgtgtttggattgagggtttaggaggggaagggaggggaggg 26324059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 173
Target Start/End: Original strand, 40709290 - 40709363
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaa 173  Q
    |||||||||||||||||| | |||| | ||||||||||||| ||||| || |||||| ||||||||||||||||    
T  40709290 ttagggtgtgtttggatttaaggtttaagaggggaagggagaggaggacttacttttcttttttaaattacgaa 40709363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 249
Target Start/End: Complemental strand, 50079577 - 50079476
Alignment:
Q  153 ttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaatt 247  Q
    ||||||| |||||| |||||||||| |||||||| ||||||||     |||||||||||| |||||||| ||||||||| |||||  ||||| || ||||    
T  50079577 ttttattatttaaagtacgaacaatataaaatgtttttttaaaataaattaagtgtttttaaagtattatatgatcatttatcatattgttagttaaatt 50079478  T
Q  248 tt 249  Q
    ||    
T  50079477 tt 50079476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 12234252 - 12234185
Alignment:
Q  105 ggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    ||||||||||||| ||||||| |||||||||||||||||||||| | | ||||  |||||||||||||    
T  12234252 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagttttcatttttaaattacg 12234185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 32951564 - 32951493
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    ||||||||||||||||||||| ||| ||||| |||||||||||||| | | ||||||  |||||||||||||    
T  32951564 ttagggtgtgtttggattgagagtttaggagaggaagggaggggagagtttacttttcgtttttaaattacg 32951493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 38510135 - 38510069
Alignment:
Q  106 gtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    ||||||||||||| |||||| |||||||||||||||||||||| | | |||| ||||||||| ||||    
T  38510135 gtgtgtttggattaagggtttaggaggggaagggaggggagggtttagttttcttttttaaactacg 38510069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 2858931 - 2859000
Alignment:
Q  102 tagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattac 170  Q
    |||||||||||||||| ||||||| ||||||| |||||||||||||| | ||||||  ||| ||||||||    
T  2858931 tagggtgtgtttggatggagggtttaggagggaaagggaggggagggtttacttttcatttctaaattac 2859000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 20607461 - 20607416
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggaggg 147  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||    
T  20607461 agggtgtgtttggatggagggtttaggaggggaagggaggggaggg 20607416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 171
Target Start/End: Complemental strand, 30010576 - 30010507
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    ||||||||||||||| ||||||| || ||||||||||||||||||| | ||||||  |||| ||||||||    
T  30010576 agggtgtgtttggatggagggtttagaaggggaagggaggggagggtttacttttcattttgaaattacg 30010507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 1085483 - 1085559
Alignment:
Q  97 actcttagggtgtgtttggattgaggg-ttaggaggggaagggaggggagggctcactttt-attttttaaattacg 171  Q
    ||||| ||||||||||||||| ||||| |||||||||| | |||||||||| || ||||||  ||||||||||||||    
T  1085483 actctaagggtgtgtttggatggagggtttaggagggggatggaggggaggacttacttttccttttttaaattacg 1085559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 7444476 - 7444547
Alignment:
Q  101 ttagggtgtgtttggattgagggttagg-aggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    |||| ||||||| |||||||||||| || ||| ||||||| ||||||| | |||||| ||||||||||||||    
T  7444476 ttagagtgtgttaggattgagggtttgggaggagaagggaagggagggtttacttttcttttttaaattacg 7444547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 20576130 - 20576176
Alignment:
Q  100 cttagggtgtgtttggattgagggtt-aggaggggaagggaggggag 145  Q
    ||||| |||||||||||| ||||||| ||||||||||||||||||||    
T  20576130 cttagagtgtgtttggatagagggtttaggaggggaagggaggggag 20576176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 26941080 - 26941042
Alignment:
Q  100 cttagggtgtgtttggattgaggg-ttaggaggggaagg 137  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  26941080 cttagggtgtgtttggattgagggtttaggaggggaagg 26941042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 170
Target Start/End: Complemental strand, 35928058 - 35927988
Alignment:
Q  101 ttagggtgtgtttggattgaggg-ttaggaggggaagggaggggagggctcacttttattttttaaattac 170  Q
    ||||||||||||||||||||||| |||| ||||||||||  |||| |  | |||||| |||||||||||||    
T  35928058 ttagggtgtgtttggattgagggcttagaaggggaaggggagggatgatttacttttcttttttaaattac 35927988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 51597672 - 51597793
Alignment:
Q  107 tgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaag 200  Q
    ||||||||||||||||||| | ||  |||||||||||||| | | |||||| |||||||||| ||| || || ||| |||| ||||||||     |||||    
T  51597672 tgtgtttggattgagggtttatgaaaggaagggaggggagagtttacttttcttttttaaatcacggactatataacatgtttttttaaaataaattaag 51597771  T
Q  201 tgtttttgaagtattacatgat 222  Q
    |||  ||||||||||| |||||    
T  51597772 tgtgattgaagtattatatgat 51597793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 41498651 - 41498579
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggagggg-aagggaggggagggctcacttttattttttaaattacg 171  Q
    ||||||||||||||||| ||| ||| |||||||| |||||||||||||  | ||||||  |||||||||||||    
T  41498651 ttagggtgtgtttggatggagagtttaggaggggtaagggaggggaggatttacttttcatttttaaattacg 41498579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 44211054 - 44210994
Alignment:
Q  192 taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaatttttta 252  Q
    ||||||||||||  ||||||||||| |||||| || |||||| ||||| || |||||||||    
T  44211054 taaattaagtgtgattgaagtattatatgatcgtttatcatgttgttattttaatttttta 44210994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 3e-55; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 101 - 271
Target Start/End: Original strand, 15353362 - 15353537
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt-aaat-- 196  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||      
T  15353362 ttagggtgtgtttggattgagggtttaggaggggaagggaggagagcgctcacttttattttttaaattacgaacaatgtaaaatgtttttttgaaataa 15353461  T
Q  197 -taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 271  Q
     ||||||||||||| |||||| ||||||||| || ||| ||||||||||||||| |||||||||||||||||||||    
T  15353462 ataagtgtttttgatgtattatatgatcatttataatgttgttaattcaattttctaaaaatcattttataatgtc 15353537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 101 - 271
Target Start/End: Original strand, 15323223 - 15323399
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taa 194  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| | ||||     |||    
T  15323223 ttagggtgtgtttggattgagggtttaggaggggaagggaggagagcgctcacttttattttttaaattacgaacaatgtaaaatatatttttaaaataa 15323322  T
Q  195 attaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 271  Q
    ||||||||||| ||| |||||| |||||||||  ||||| ||||||||||||||| |||||||||||||||||||||    
T  15323323 attaagtgtttctgatgtattatatgatcatttgtcatgttgttaattcaattttctaaaaatcattttataatgtc 15323399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 103 - 285
Target Start/End: Complemental strand, 9051776 - 9051590
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 196  Q
    ||||||||||||||||||||||| | ||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||| | ||||     |||||    
T  9051776 agggtgtgtttggattgagggtttaagaggggaagggaggggatg-ctcacttttattttt-aaattacgaacaatgtaaaatattttttttaaataaat 9051679  T
Q  197 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaa 285  Q
    ||||||||||| |||||  | ||||||||| |||||| ||||||||||||||| |||||||||||||||||| ||  ||| ||||||||    
T  9051678 taagtgtttttaaagtagcatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatatccgtaatttaaaaaa 9051590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 99 - 304
Target Start/End: Original strand, 31798914 - 31799128
Alignment:
Q  99 tcttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt----- 192  Q
    ||||||||||||||||||||||||||| ||||||  ||| |||| || | ||| ||||||||||||||||||||| ||||||||||||| |||||         
T  31798914 tcttagggtgtgtttggattgagggtttaggaggataagagaggagatgactcgcttttattttttaaattacgagcaatgtaaaatgtttttttttttt 31799013  T
Q  193 ---aaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaa 289  Q
       |||  || |||||||||||||||| ||||||||| |||||| |||||||||||||||| |||||| |||||||||| ||  ||| ||||||||| ||    
T  31799014 aataaaaaaaatgtttttgaagtattatatgatcatttatcatgttgttaattcaatttttaaaaaattattttataatatccgtaatttaaaaaagaaa 31799113  T
Q  290 tgtaagccctcccct 304  Q
     |||| | |||||||    
T  31799114 agtaaactctcccct 31799128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 101 - 306
Target Start/End: Original strand, 10293248 - 10293457
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttt---ttaaat 196  Q
    ||||||||||||||||||| ||||| ||||  | ||  ||||||||||||||||||||||||||||||||||||||||||||||| | |||    |||||    
T  10293248 ttagggtgtgtttggattgtgggtttaggaaagaaaaagaggggagggctcacttttattttttaaattacgaacaatgtaaaatatttttaaaataaat 10293347  T
Q  197 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc 296  Q
    ||    |||||||||||||| ||||| ||| || ||| ||| |||||| |||| |||||||||||||||||| ||| ||| || |||||| || ||||||    
T  10293348 taccgatttttgaagtattatatgattatttatgatgttgtcaattcagttttctaaaaatcattttataatatctgtaatttgaaaaagaaaagtaagc 10293447  T
Q  297 cctcccctcc 306  Q
     |||||||||    
T  10293448 tctcccctcc 10293457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 103 - 216
Target Start/End: Original strand, 23090995 - 23091114
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 196  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||     |||||    
T  23090995 agggtgtgtttggattgaaggtttaggaggggaagggaggggagggctcacttttatcttttaaattacgaacaatctaaaatgtatttttaaactaaat 23091094  T
Q  197 taagtgtttttgaagtatta 216  Q
    ||||||||||||||||||||    
T  23091095 taagtgtttttgaagtatta 23091114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 142 - 267
Target Start/End: Original strand, 26318345 - 26318475
Alignment:
Q  142 ggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtgtttttgaagtattacatgatcattgatcatgctg 236  Q
    |||||| ||| ||||||||||||||||||||| ||| |||||||| ||||||||     ||||||||||||||||||||| ||||||| | |||||| ||    
T  26318345 ggagggttcatttttattttttaaattacgaaaaatataaaatgtttttttaaaataaattaagtgtttttgaagtattatatgatcaattatcatgttg 26318444  T
Q  237 ttaattcaattttttaaaaatcattttataa 267  Q
    ||||||||||||| ||||| |||||||||||    
T  26318445 ttaattcaattttctaaaagtcattttataa 26318475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 136 - 271
Target Start/End: Complemental strand, 4097451 - 4097305
Alignment:
Q  136 gggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt-----------aaattaagtgtttttgaagtattacatgatca 224  Q
    ||||||||| | |||||||||||||||||||||  |||||||||||||||| |||||           |||||||||||||| ||||||||  |||||||    
T  4097451 gggaggggatgactcacttttattttttaaattgtgaacaatgtaaaatgttttttttttttaaaaataaattaagtgttttggaagtattgtatgatca 4097352  T
Q  225 ttgatcatgctgttaattcaattttttaaaaatcattttataatgtc 271  Q
    || |||||| ||||||||||||||| ||||||  |||||||||||||    
T  4097351 tttatcatgttgttaattcaattttctaaaaaatattttataatgtc 4097305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 4097759 - 4097620
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt------ta 193  Q
    |||| |||||||||||||||||||| | ||||||||||||||| |||| |||||||| |||||||||||||| ||||| ||| || | ||||      ||    
T  4097759 ttagagtgtgtttggattgagggtttaagaggggaagggagggaagggttcacttttcttttttaaattacggacaatataacattttttttccaaaata 4097660  T
Q  194 aattaagtgtttttgaagtattacatgatcattgatcatg 233  Q
    ||||||||||  ||||||||||| |||||| || ||||||    
T  4097659 aattaagtgtgattgaagtattatatgatcgtttatcatg 4097620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 192 - 295
Target Start/End: Original strand, 3841180 - 3841284
Alignment:
Q  192 taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaatttttt--aaaaatcattttataatgtctttaaattaaaaaaggaa 289  Q
    ||||||||||||||||||||||||| || |||||| |||||  ||||||||||||||| |  ||||||||||||||||||||  ||| ||||||||| ||    
T  3841180 taaattaagtgtttttgaagtattatatcatcatttatcat-ttgttaattcaattttgtaaaaaaatcattttataatgtccgtaatttaaaaaagaaa 3841278  T
Q  290 tgtaag 295  Q
     |||||    
T  3841279 agtaag 3841284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 15373739 - 15373669
Alignment:
Q  201 tgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 271  Q
    ||||||||| |||||| |||||||||  ||||| ||||||||||||||| |||||||||||||||||||||    
T  15373739 tgtttttgatgtattatatgatcatttgtcatgttgttaattcaattttctaaaaatcattttataatgtc 15373669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 14515467 - 14515542
Alignment:
Q  97 actcttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||| |   |||| ||||||||||||||    
T  14515467 actctaagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacg 14515542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 306
Target Start/End: Original strand, 10818229 - 10818425
Alignment:
Q  103 agggtgtgtttggattgaggg-ttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaattaagt 201  Q
    ||||||||||||||||||||| |||||||||||||||||||||  | | | |||| |||||||||||||| ||||| ||| |||   |||||||     |    
T  10818229 agggtgtgtttggattgagggtttaggaggggaagggaggggattgtttatttttcttttttaaattacggacaatataacatg---ttttaaa-----t 10818320  T
Q  202 gtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcc 301  Q
    ||  ||||||||||| ||||||||| |||||| |  ||  | ||| ||||||||| ||||| ||| ||||  ||| ||||||| | || |||| ||||||    
T  10818321 gtgattgaagtattatatgatcatttatcatgttaatatgttaatattttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctcc 10818420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 286
Target Start/End: Complemental strand, 25468548 - 25468454
Alignment:
Q  192 taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 286  Q
    ||||||||||||||||||||||||| || |||||| |||| | |||||| | |||||| | ||||| |||||||||||||  ||| |||||||||    
T  25468548 taaattaagtgtttttgaagtattatataatcatttatcacgttgttaaattaattttcttaaaattattttataatgtccataatttaaaaaag 25468454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 34176711 - 34176606
Alignment:
Q  201 tgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctc 300  Q
    |||||||||| ||||| ||||||||| || ||  ||||||||||||||||||||||||| |||||||| |   ||| ||||||||| || ||||| | ||    
T  34176711 tgtttttgaaatattatatgatcatttattatattgttaattcaattttttaaaaatcaatttataattttcgtaatttaaaaaagaaaagtaagtcttc 34176612  T
Q  301 ccctcc 306  Q
    ||||||    
T  34176611 ccctcc 34176606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 186
Target Start/End: Complemental strand, 15373776 - 15373737
Alignment:
Q  147 gctcacttttattttttaaattacgaacaatgtaaaatgt 186  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  15373776 gctcacttttattttttaaattacgaacaatgtaaaatgt 15373737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 103 - 169
Target Start/End: Original strand, 30487306 - 30487373
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaatta 169  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||  || ||||||||    
T  30487306 agggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcattgttaaatta 30487373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 12811227 - 12811157
Alignment:
Q  100 cttagggtgtgtttggattgaggg-ttaggaggggaagggaggggagggctcacttttattttttaaatta 169  Q
    |||||||||||||||||||||||| |||||| |||||| |||||||||| | |||||| || |||||||||    
T  12811227 cttagggtgtgtttggattgagggtttaggatgggaagagaggggagggattacttttcttctttaaatta 12811157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 148 - 186
Target Start/End: Complemental strand, 34177098 - 34177060
Alignment:
Q  148 ctcacttttattttttaaattacgaacaatgtaaaatgt 186  Q
    |||||||||||||||||||||||||||||||||||||||    
T  34177098 ctcacttttattttttaaattacgaacaatgtaaaatgt 34177060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 9721138 - 9721207
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    |||||||||||||||||| |||| |||||||||||||||||||||| | | ||||  |||||||||||||    
T  9721138 agggtgtgtttggattgaaggtttaggaggggaagggaggggagggtttatttttcatttttaaattacg 9721207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 196
Target Start/End: Complemental strand, 10818459 - 10818366
Alignment:
Q  104 gggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaat 196  Q
    |||||||||||||||||| ||| |||||||| ||||||||||||| | ||||||  ||||||||||||| ||| | | |||||| |||| ||||    
T  10818459 gggtgtgtttggattgagagtttaggaggggtagggaggggagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaat 10818366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 28477076 - 28477116
Alignment:
Q  193 aaattaagtgtttttgaagtattacatgatcattgatcatg 233  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  28477076 aaattaagtgtttttgaagtattacatgatcatttatcatg 28477116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 29692974 - 29693014
Alignment:
Q  193 aaattaagtgtttttgaagtattacatgatcattgatcatg 233  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  29692974 aaattaagtgtttttgaagtattacatgatcatttatcatg 29693014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 196
Target Start/End: Complemental strand, 5287514 - 5287471
Alignment:
Q  153 ttttattttttaaattacgaacaatgtaaaatgtctttttaaat 196  Q
    ||||||||||||||||||||||||| |||||||| |||||||||    
T  5287514 ttttattttttaaattacgaacaatataaaatgtttttttaaat 5287471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 9719034 - 9719100
Alignment:
Q  106 gtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    |||||||||||||||||||| |||||||||||||||||||||  | | ||||  |||||||||||||    
T  9719034 gtgtgtttggattgagggtttaggaggggaagggaggggaggatttatttttcatttttaaattacg 9719100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 19278278 - 19278213
Alignment:
Q  106 gtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    |||||||||||||||| ||| |||||||||||||||||||||| | | |||| ||||||||||||||    
T  19278278 gtgtgtttggattgagagtttaggaggggaagggaggggagggttta-ttttcttttttaaattacg 19278213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 23091195 - 23091133
Alignment:
Q  111 tttggattgagggtt-aggaggggaagggaggggagggctcactttt-attttttaaattacg 171  Q
    ||||||| ||||||| |||||||||||||||||||||||| ||||||  ||||||||||||||    
T  23091195 tttggatggagggtttaggaggggaagggaggggagggcttacttttctttttttaaattacg 23091133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 30487546 - 30487480
Alignment:
Q  106 gtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    |||||||| ||||||||||| ||||||||||||||| |||||| | | |||||||||||||| ||||    
T  30487546 gtgtgtttcgattgagggtttaggaggggaagggagtggagggtttagttttattttttaaactacg 30487480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 191
Target Start/End: Original strand, 665841 - 665929
Alignment:
Q  103 agggtgtgtttggattgaggg-ttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 191  Q
    |||||||||||||| |||||| ||||||||||||| |||||||||| ||| ||||  ||||||||||| ||| | | | |||||||||||    
T  665841 agggtgtgtttgga-tgagggtttaggaggggaagtgaggggagggttcatttttcatttttaaattatgaatattatgaaatgtctttt 665929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 31849105 - 31849174
Alignment:
Q  98 ctcttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaa 166  Q
    ||||||| ||||||| |||||||||||| | |||||||||||||||||||| | | |||| |||||||||    
T  31849105 ctcttagagtgtgttaggattgagggtttaagaggggaagggaggggagggtttagttttcttttttaaa 31849174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 184
Target Start/End: Original strand, 4097229 - 4097317
Alignment:
Q  97 actcttagggtgtgtttggattgaggg-ttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaat 184  Q
    ||||| ||||||||||||||||||||| |||||||||||||| ||  ||| | | ||||||||||||| ||| ||| ||| | ||||||    
T  4097229 actctaagggtgtgtttggattgagggtttaggaggggaaggaagatgagagtttacttttattttttgaatcacggacattataaaat 4097317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 147
Target Start/End: Complemental strand, 9298738 - 9298690
Alignment:
Q  100 cttagggtgtgtttggattgaggg-ttaggaggggaagggaggggaggg 147  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||||    
T  9298738 cttagggtgtgtttggatgaaggggttaggaggggaagggaggggaggg 9298690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 9719273 - 9719178
Alignment:
Q  104 gggtgtgtttggattgaggg-ttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaattaa 199  Q
    |||||||||||||||||||| ||| ||||||||| |||||| ||| | | |||| ||||||||||| || || || ||| ||| |||||||||||||    
T  9719273 gggtgtgtttggattgagggtttatgaggggaagagaggggtgggtttaattttcttttttaaattccggactatataacatg-ctttttaaattaa 9719178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 134
Target Start/End: Original strand, 1300623 - 1300661
Alignment:
Q  97 actcttagggtgtgtttggattgaggg-ttaggagggga 134  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  1300623 actcttagggtgtgtttggattgagggtttaggagggga 1300661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 184
Target Start/End: Complemental strand, 14515719 - 14515633
Alignment:
Q  99 tcttagggtgtgtttggattgaggg-ttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaat 184  Q
    ||||||||||||||||||| ||||| |||||||||||||| | ||||||| | |  |||  ||||||||||| ||||| | ||||||    
T  14515719 tcttagggtgtgtttggatggagggtttaggaggggaaggaaagggagggtttagatttcatttttaaattatgaacactataaaat 14515633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 191
Target Start/End: Complemental strand, 31849319 - 31849265
Alignment:
Q  137 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 191  Q
    ||||||||||| ||||||||  ||||||||||||| ||| | |||||||||||||    
T  31849319 ggaggggagggttcacttttcatttttaaattacggacactataaaatgtctttt 31849265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 9051530 - 9051603
Alignment:
Q  99 tcttagggtgtgtttggattgagg-gttaggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    |||||||||| |||||||||||||  ||||||||| || ||||| || || | |||||| ||||||||||||||    
T  9051530 tcttagggtgcgtttggattgaggatttaggagggaaatggaggagatggtttactttttttttttaaattacg 9051603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 25468639 - 25468562
Alignment:
Q  99 tcttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaaca 175  Q
    ||||| |||||||||||||| | |||| | ||||| ||||||||| |||  |||||||||| |||| |||||||||||    
T  25468639 tcttaaggtgtgtttggattaatggtttaagagggtaagggagggaaggattcacttttatatttttaattacgaaca 25468562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 34176593 - 34176642
Alignment:
Q  124 ttaggaggggaagggaggggagggctcacttttattttttaaattacgaa 173  Q
    ||||||||||| ||||||||| | || |||||| ||||||||||||||||    
T  34176593 ttaggaggggatgggaggggaagacttacttttcttttttaaattacgaa 34176642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 170
Target Start/End: Complemental strand, 16738239 - 16738172
Alignment:
Q  103 agggtgtgtttggattgaggg-ttaggaggggaagggaggggagggctcacttttattttttaaattac 170  Q
    ||||| ||||||||||||||| |||||| ||||| ||||||||| | | |||||| |||||||||||||    
T  16738239 agggtttgtttggattgagggtttaggatgggaa-ggaggggagagtttacttttcttttttaaattac 16738172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 2e-52; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 103 - 285
Target Start/End: Original strand, 31061359 - 31061547
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 196  Q
    |||||||||||||||||| |||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||     |||||    
T  31061359 agggtgtgtttggattgaaggtttaggaggggaaaggatgggagggctcacttttattttttaaattacgaacaatgtaaaatgtgtttttaaaataaat 31061458  T
Q  197 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaa 285  Q
    |||||||||||||| ||||| ||||||||| |||||| |||||||||||||||  |||| ||| |||||||||||| ||| ||||||||    
T  31061459 taagtgtttttgaaatattatatgatcatttatcatgttgttaattcaattttcaaaaagtcactttataatgtctgtaatttaaaaaa 31061547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 103 - 286
Target Start/End: Original strand, 45257307 - 45257496
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 196  Q
    ||||||||||||||||||| ||| |||||||||| ||| |||||| |||||||||||||| |||||||||||||||||||||||| || |     |||||    
T  45257307 agggtgtgtttggattgagagtttaggaggggaaaggaagggaggactcacttttattttataaattacgaacaatgtaaaatgttttcttaaaataaat 45257406  T
Q  197 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 286  Q
    |||||||||||||||||||| ||||||||| |||||  |||||||||||||||  ||||||||||||||||| ||  ||| |||||||||    
T  45257407 taagtgtttttgaagtattatatgatcatttatcatattgttaattcaattttcaaaaaatcattttataatatccgtaatttaaaaaag 45257496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 101 - 295
Target Start/End: Complemental strand, 42296549 - 42296349
Alignment:
Q  101 ttagggtgtgtttggattgaggg-ttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttta-----a 194  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||| | ||||||     |    
T  42296549 ttagggtgtgtttggattgagggattaggaggggaagggaggagagggttcacttttattttttaaattacgaacgatgtaaaatatttttttaaaatga 42296450  T
Q  195 attaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaa 294  Q
    ||||||||||||| || ||||| ||||||||| || ||| |||||||||| |||| ||||| |||||||||||| ||  ||| ||||||||| || ||||    
T  42296449 attaagtgtttttaaattattatatgatcatttattatgttgttaattcatttttctaaaattcattttataatatccgtaatttaaaaaagaaaagtaa 42296350  T
Q  295 g 295  Q
    |    
T  42296349 g 42296349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 111 - 264
Target Start/End: Original strand, 33265615 - 33265773
Alignment:
Q  111 tttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt----taaattaagtgttt 205  Q
    ||||||||||||||| |||||||||||||||| || | |||| |||||||||||||||||||||||||||||||  | ||||    ||||||||||||||    
T  33265615 tttggattgagggtttaggaggggaagggaggcgatgactcatttttattttttaaattacgaacaatgtaaaacattttttaaaataaattaagtgttt 33265714  T
Q  206 ttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcatttta 264  Q
    ||||||||||| ||||||||| |||||  |||||||||||||||  |||||||||||||    
T  33265715 ttgaagtattatatgatcatttatcatattgttaattcaattttcaaaaaatcatttta 33265773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 105 - 267
Target Start/End: Complemental strand, 3094595 - 3094427
Alignment:
Q  105 ggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaattaa---- 199  Q
    ||||||||||||||||||||| |||| || ||||||||||| | ||||||||||||||||||||||| ||| ||||||||||| ||| |||| |||        
T  3094595 ggtgtgtttggattgagggtttaggaaggaaagggaggggaagactcacttttattttttaaattacaaactatgtaaaatgtttttctaaaataaattt 3094496  T
Q  200 -gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataa 267  Q
     ||||||||||||||||| ||||| ||| |||||| ||||||||||||||| ||| |||||||||||||    
T  3094495 cgtgtttttgaagtattatatgattatttatcatgttgttaattcaattttctaagaatcattttataa 3094427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 103 - 268
Target Start/End: Complemental strand, 2381231 - 2381060
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 196  Q
    ||||||| ||||||||| ||||| | ||||| | |||||||||| | |||||||||||||||||||||||||||||||||||||| ||||     |||||    
T  2381231 agggtgtatttggattgtgggtttatgagggaatgggaggggagagttcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaat 2381132  T
Q  197 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataat 268  Q
    |||||||||||||||||||| || |||||  |||||| ||| ||||||||||| ||||| ||||||||||||    
T  2381131 taagtgtttttgaagtattatatcatcatcaatcatgttgtcaattcaattttctaaaattcattttataat 2381060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 104 - 285
Target Start/End: Complemental strand, 1053000 - 1052811
Alignment:
Q  104 gggtgtgtttggattgagggtt-aggag-gggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt------taaa 195  Q
    |||||| ||||||||||| ||| ||||| ||||| |||| |||| |||||||||||||||||||||||||||||||||||||||| ||||      ||||    
T  1053000 gggtgtatttggattgagagtttaggagcgggaaaggagaggagagctcacttttattttttaaattacgaacaatgtaaaatgtttttttttaaataaa 1052901  T
Q  196 ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaa 285  Q
    |||| |||||||||| ||||| | ||||||| |||||| ||||||||||||||| ||||||| |||||||||| ||  ||| ||||||||    
T  1052900 ttaaatgtttttgaaatattatacgatcatttatcatgttgttaattcaattttctaaaaattattttataatatcgataatttaaaaaa 1052811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 136 - 271
Target Start/End: Complemental strand, 15085911 - 15085770
Alignment:
Q  136 gggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt------taaattaagtgtttttgaagtattacatgatcattgat 229  Q
    |||| |||||||||| |||||||||||||||||||||||||| |||||| | ||||      ||||||||||||||||||||||||| ||||||||| ||    
T  15085911 gggatgggagggctcgcttttattttttaaattacgaacaatataaaatattttttaaaaaataaattaagtgtttttgaagtattatatgatcatttat 15085812  T
Q  230 catgctgttaattcaattttttaaaaatcattttataatgtc 271  Q
    || | ||||||||||||||| |||||||||||||||||||||    
T  15085811 caagttgttaattcaattttctaaaaatcattttataatgtc 15085770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 110 - 264
Target Start/End: Complemental strand, 31928286 - 31928121
Alignment:
Q  110 gtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt----------taaatta 198  Q
    |||||||| ||||||| |||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||| ||||          |||||||    
T  31928286 gtttggatcgagggtttaggaggggaagggaagggagggctcacttttaatttttaaattacaaacaatgtaaaatgtttttttttttttaaataaatta 31928187  T
Q  199 agtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcatttta 264  Q
    |||||||||||||||||| ||||||||| |||||| | |||||||||||||  |||||||||||||    
T  31928186 agtgtttttgaagtattatatgatcatttatcatgttattaattcaattttaaaaaaatcatttta 31928121  T

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Target: chr2; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 103 - 271
Target Start/End: Original strand, 34187575 - 34187751
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 196  Q
    ||||||||||||||||||| ||| ||||| |||||| |||||| || ||||||||| |||||||||||||||||| |||| |||| || |     |||||    
T  34187575 agggtgtgtttggattgagagtttaggagtggaaggaaggggaaggttcacttttaatttttaaattacgaacaacgtaagatgttttattaaaataaat 34187674  T
Q  197 taagtgtttttgaagtat--tacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 271  Q
    ||||||||||||||||||  || || |||||| |||||| ||||||||||||||| |||||||||||||||||||||    
T  34187675 taagtgtttttgaagtattatatataatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtc 34187751  T

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Target: chr2; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 151 - 283
Target Start/End: Original strand, 45098218 - 45098355
Alignment:
Q  151 acttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaa 245  Q
    |||||||||||||| ||||| || |||||||||||| ||||||||     ||||||||||||||||||||| ||||||||| |||||| |||||||||||    
T  45098218 acttttattttttacattacaaataatgtaaaatgtatttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgttgttaattcaa 45098317  T
Q  246 ttttttaaaaatcattttataatgtctttaaattaaaa 283  Q
    ||||| ||||| ||||||||||||||| ||| ||||||    
T  45098318 tttttcaaaaaccattttataatgtctgtaatttaaaa 45098355  T

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Target: chr2; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 151 - 284
Target Start/End: Original strand, 35325316 - 35325456
Alignment:
Q  151 acttttattttttaaattacgaacaatgtaaaatgtcttttt-------aaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattc 243  Q
    ||||||||||||| |||||||||||||||||||| | |||||       ||||||||| |||||||||||||| ||||||||| |||||| | |||||||    
T  35325316 acttttatttttttaattacgaacaatgtaaaatatatttttttaaaataaattaagtatttttgaagtattatatgatcatttatcatgttattaattc 35325415  T
Q  244 aattttttaaaaatcattttataatgtctttaaattaaaaa 284  Q
    |||||||||||||| ||||||||||||| |||| |||||||    
T  35325416 aattttttaaaaattattttataatgtcgttaatttaaaaa 35325456  T

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Target: chr2; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 103 - 224
Target Start/End: Complemental strand, 1270522 - 1270394
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt------taaa 195  Q
    |||||| ||||||||||||| || ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||      ||||    
T  1270522 agggtgcgtttggattgaggatttaggaggacaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtttttttttaaataaa 1270423  T
Q  196 ttaagtgtttttgaagtattacatgatca 224  Q
    ||||||||||||||||| ||| |||||||    
T  1270422 ttaagtgtttttgaagtgttatatgatca 1270394  T

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Target: chr2; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 100 - 216
Target Start/End: Complemental strand, 17334059 - 17333936
Alignment:
Q  100 cttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttatt-ttttaaattacgaacaatgtaaaatgtctttt-----t 192  Q
    |||||||||| |||| |||||||||| |||||||||||| |||||||| |||||||||||| |||||| |||| ||||||||||||||||||||     |    
T  17334059 cttagggtgtttttgaattgagggtttaggaggggaaggaaggggaggactcacttttatttttttaagttacaaacaatgtaaaatgtctttttaaaat 17333960  T
Q  193 aaattaagtgtttttgaagtatta 216  Q
    ||||||||||||||||||||||||    
T  17333959 aaattaagtgtttttgaagtatta 17333936  T

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Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 198 - 310
Target Start/End: Complemental strand, 36052230 - 36052118
Alignment:
Q  198 aagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagcc 297  Q
    ||||||||||||||||| | ||||||||  || ||| ||||||||||||||| |||||||||||||||||||| | ||| |||||| || || ||||| |    
T  36052230 aagtgtttttgaagtatcatatgatcatgtatgatgttgttaattcaattttctaaaaatcattttataatgtatgtaatttaaaatagaaaagtaagtc 36052131  T
Q  298 ctcccctcctaaa 310  Q
     ||||||||||||    
T  36052130 gtcccctcctaaa 36052118  T

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Target: chr2; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 22356250 - 22356179
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    |||||||||||||||||||||| || |||||||||||||||||||||| ||| |||| ||||||||||||||    
T  22356250 ttagggtgtgtttggattgaggatttaggaggggaagggaggggagggttcatttttcttttttaaattacg 22356179  T

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Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 8554446 - 8554369
Alignment:
Q  194 aattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 271  Q
    |||| |||||||||||||||||  | ||||||| |||||| |||||||||||||||| |||||| |||||||||||||    
T  8554446 aattgagtgtttttgaagtattgtacgatcatttatcatgatgttaattcaatttttaaaaaattattttataatgtc 8554369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 153 - 225
Target Start/End: Original strand, 22356016 - 22356093
Alignment:
Q  153 ttttattttttaaattacgaacaatgtaaaatgtctttttaa-----attaagtgtttttgaagtattacatgatcat 225  Q
    |||||||||||||||||||||||||||||||||| |||||||     |||||||||||||||||||||| || |||||    
T  22356016 ttttattttttaaattacgaacaatgtaaaatgtttttttaaaatagattaagtgtttttgaagtattatatcatcat 22356093  T

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Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 103 - 191
Target Start/End: Complemental strand, 23748339 - 23748250
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 191  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||  |||||||| |||| ||| | | |||||||||||    
T  23748339 agggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcatttttaaactacggacactatgaaatgtctttt 23748250  T

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Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 193 - 298
Target Start/End: Original strand, 9313079 - 9313188
Alignment:
Q  193 aaattaagtgtttttgaagtattacat----gatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaagga 288  Q
    |||||||||||||||||||||| | ||    ||||||| |||| | |||||||||||||||  ||||||||||||||||||||| ||| ||||||| | |    
T  9313079 aaattaagtgtttttgaagtataatatgatcgatcatttatcaagttgttaattcaattttcgaaaaatcattttataatgtctgtaatttaaaaaggaa 9313178  T
Q  289 atgtaagccc 298  Q
    | ||||||||    
T  9313179 aagtaagccc 9313188  T

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Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 21502067 - 21502204
Alignment:
Q  137 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt-------aaattaagtgtttttgaagtattacatgatcattgat 229  Q
    ||||||||||| |||  ||||||||| |||||||||||||| |||||| | |||||       |||||||||||||||||||||||| |||| |||| ||    
T  21502067 ggaggggagggttcagatttattttt-aaattacgaacaatataaaatattttttttaaaaataaattaagtgtttttgaagtattatatgaccatttat 21502165  T
Q  230 catgctgttaattcaattttttaaaaatcattttataat 268  Q
    | || ||||||| ||||||| | ||||| ||||||||||    
T  21502166 cttgttgttaatgcaattttcttaaaattattttataat 21502204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 887356 - 887285
Alignment:
Q  100 cttagggtgtgtttggattgagggttaggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    |||||||||||| |||||  ||| |||||||||||||||||||||| ||| |||||| ||||||||||||||    
T  887356 cttagggtgtgtctggatgaaggtttaggaggggaagggaggggagcgcttacttttcttttttaaattacg 887285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 101 - 167
Target Start/End: Original strand, 35736173 - 35736240
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaat 167  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| | | |||| ||||||||||    
T  35736173 ttagggtgtgtttggattgagggtttaggaggggaagggaggggaggggttaattttcttttttaaat 35736240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 36347787 - 36347716
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||| | | |||||| ||||||||||||||    
T  36347787 ttagggtgtgtttggattgagggtttaggaggggaagggaagggagagtttacttttcttttttaaattacg 36347716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 35736431 - 35736365
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaatt 168  Q
    ||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||  ||||||||||    
T  35736431 agggtgtgtttggatggagggtttaggaggtgaagggaggggagggctcacttttcgtttttaaatt 35736365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 305
Target Start/End: Original strand, 42813726 - 42813828
Alignment:
Q  203 tttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctccc 302  Q
    ||||| |||||||| ||||| ||| |||| | ||||||||||||||| ||||||||||||||||||||   ||| ||||||||| ||  |||||| ||||    
T  42813726 tttttaaagtattatatgattatttatcaggttgttaattcaattttctaaaaatcattttataatgttcgtaatttaaaaaagaaaaataagccatccc 42813825  T
Q  303 ctc 305  Q
    |||    
T  42813826 ctc 42813828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 17379842 - 17379891
Alignment:
Q  99 tcttagggtgtgtttggattgaggg-ttaggaggggaagggaggggaggg 147  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17379842 tcttagggtgtgtttggattgagggtttaggaggggaagggaggggaggg 17379891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 103 - 226
Target Start/End: Original strand, 41778773 - 41778902
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 196  Q
    ||||||||||||||||||||||| || |||| |||||||||||||| | |||||| |  ||||||||| | ||| | |||||||| ||||     |||||    
T  41778773 agggtgtgtttggattgagggtttagaagggaaagggaggggagggtttacttttgtactttaaattatggacagtataaaatgtttttttaaaataaat 41778872  T
Q  197 taagtgtttttgaagtattacatgatcatt 226  Q
    |||||||  ||||||||||| |||||||||    
T  41778873 taagtgtgattgaagtattatatgatcatt 41778902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 103 - 233
Target Start/End: Complemental strand, 15224938 - 15224802
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttt-----ttaaat 196  Q
    |||||||||||||||  |||||| ||||||||||||||||||| || | |||||| ||||||||||||||  | || ||| |||| |||      |||||    
T  15224938 agggtgtgtttggatcaagggtttaggaggggaagggaggggatggtttacttttcttttttaaattacgggctatataacatgtttttctagaataaat 15224839  T
Q  197 taagtgtttttgaagtattacatgatcattgatcatg 233  Q
    |||||||  ||||||||||| ||||||||| ||||||    
T  15224838 taagtgtgattgaagtattatatgatcatttatcatg 15224802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 103 - 185
Target Start/End: Complemental strand, 42813864 - 42813781
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 185  Q
    |||||||||||||||  |||||| ||||||||||| ||||||| |||| | |||| |||||||||||||||||| | |||||||    
T  42813864 agggtgtgtttggatgaagggtttaggaggggaagagaggggatggcttatttttcttttttaaattacgaacattataaaatg 42813781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 2241413 - 2241479
Alignment:
Q  105 ggtgtgtttggattgagggttaggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    ||||||||| ||||||||||||||||||||||||||||||| | | |||||| | || |||||||||    
T  2241413 ggtgtgtttagattgagggttaggaggggaagggaggggagagtttacttttttattataaattacg 2241479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 105 - 233
Target Start/End: Original strand, 16713494 - 16713628
Alignment:
Q  105 ggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt-----aaatta 198  Q
    ||||||||| ||||||||||| | |||||||||||| ||||  | ||| ||||| ||||||||||||| ||||| |||||| | |||||     ||||||    
T  16713494 ggtgtgttttgattgagggtttaagaggggaagggaagggatagttcaattttaatttttaaattacgtacaatataaaatatttttttaaaagaaatta 16713593  T
Q  199 agtgtttttgaagtattacatgatcattgatcatg 233  Q
     ||||||||||||||||| ||  ||||| ||||||    
T  16713594 tgtgtttttgaagtattatatattcatttatcatg 16713628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 103 - 232
Target Start/End: Original strand, 886919 - 887051
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 196  Q
    |||||||||| || ||||||||| |||||||||||| | ||||||||| |||||| |||||||||||||  ||||| |||||||  ||||     |||||    
T  886919 agggtgtgttggg-ttgagggtttaggaggggaaggtaagggagggcttacttttcttttttaaattac--acaatataaaatgcttttttaaaataaat 887015  T
Q  197 taagtgtttttgaagtattacatgatcattgatcat 232  Q
    || ||||  ||||||||||| ||||||||| |||||    
T  887016 tatgtgtgattgaagtattatatgatcatttatcat 887051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 124 - 215
Target Start/End: Complemental strand, 23739978 - 23739882
Alignment:
Q  124 ttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaagtgtttttgaagtatt 215  Q
    ||||||||| ||| | | |||||||| || |||||||||||||||||||| || ||||||||| ||||     |||||||| |||||||||||||||    
T  23739978 ttaggagggaaagagggaggagggctaacatttattttttaaattacgaaaaaagtaaaatgtttttttaaaataaattaaatgtttttgaagtatt 23739882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 14196878 - 14196819
Alignment:
Q  137 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaat 196  Q
    ||||||||||||| |||||| |||||||||||||||||| | |||||||| |||| ||||    
T  14196878 ggaggggagggcttacttttcttttttaaattacgaacactataaaatgttttttaaaat 14196819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 36046443 - 36046377
Alignment:
Q  105 ggtgtgtttggattgaggg-ttaggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    ||||||||||||||||||| ||| ||||||||||||||||| || | |||||| ||||||||||||||    
T  36046443 ggtgtgtttggattgagggtttatgaggggaagggagggga-ggtttacttttgttttttaaattacg 36046377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 2380987 - 2381057
Alignment:
Q  98 ctcttagggtgtgtttggattgaggg-ttaggaggggaa-gggaggggagggctcacttttattttttaaa 166  Q
    |||||||| ||||||||||| ||||| |||||||||||| ||||||||||| |||| |||| |||||||||    
T  2380987 ctcttaggatgtgtttggatagagggtttaggaggggaaggggaggggaggactcatttttcttttttaaa 2381057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 185
Target Start/End: Complemental strand, 33265813 - 33265767
Alignment:
Q  139 aggggagggctcacttttattttttaaattacgaacaatgtaaaatg 185  Q
    |||||||| ||| |||||||||||||||||| |||||||||||||||    
T  33265813 aggggaggactcgcttttattttttaaattatgaacaatgtaaaatg 33265767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 45257553 - 45257482
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    ||||||||||||||||| |||| || |||| ||||||||||| || || | |||||| ||||||||||||||    
T  45257553 ttagggtgtgtttggatggaggttttaggatgggaagggaggagatggtttacttttcttttttaaattacg 45257482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 144
Target Start/End: Complemental strand, 17380085 - 17380043
Alignment:
Q  103 agggtgtgtttggattgaggg-ttaggaggggaagggagggga 144  Q
    ||||||||||||||||||||| ||||||||||||| |||||||    
T  17380085 agggtgtgtttggattgagggtttaggaggggaagtgagggga 17380043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 31795772 - 31795838
Alignment:
Q  106 gtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    |||||||||||| ||||||| | |||| |||||||||||||| || ||||||  |||||||||||||    
T  31795772 gtgtgtttggatggagggtttatgaggtgaagggaggggaggacttacttttcgtttttaaattacg 31795838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 192 - 306
Target Start/End: Complemental strand, 31795918 - 31795804
Alignment:
Q  192 taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatg 291  Q
    ||||||||||||  ||||||||||| |||||| || |||||| ||||| || | ||||| ||||| | ||| ||| ||||  ||| ||||||| | || |    
T  31795918 taaattaagtgtgattgaagtattatatgatcgtttatcatgttgttattttattttttaaaaaaacttttcatagtgtccgtaatttaaaaacgaaaag 31795819  T
Q  292 taagccctcccctcc 306  Q
    |||| ||||||||||    
T  31795818 taagtcctcccctcc 31795804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 8426901 - 8426946
Alignment:
Q  124 ttaggaggggaagggaggggagggctcacttttattttttaaatta 169  Q
    |||||||||||||||| ||||||| | ||||||| |||||||||||    
T  8426901 ttaggaggggaagggaagggagggtttacttttaatttttaaatta 8426946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 171
Target Start/End: Complemental strand, 9631804 - 9631735
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    ||||||||||||||| ||||||| ||||||| |||||||  ||||| | ||||||  |||||||||||||    
T  9631804 agggtgtgtttggatggagggtttaggagggaaagggagaagagggttaacttttcgtttttaaattacg 9631735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 40022359 - 40022407
Alignment:
Q  99 tcttagggtgtgtttggattgaggg-ttaggaggggaagggaggggaggg 147  Q
    ||||||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  40022359 tcttagggtgtgtttggattgagggtttaggagggtaaggg-ggggaggg 40022407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 304
Target Start/End: Complemental strand, 14187167 - 14187111
Alignment:
Q  248 ttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccct 304  Q
    |||| |||| ||||||||||||| | ||| ||||||||| || ||||||||||||||    
T  14187167 ttttcaaaaacattttataatgtttataatttaaaaaagaaaagtaagccctcccct 14187111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 22356141 - 22356173
Alignment:
Q  235 tgttaattcaattttttaaaaatcattttataa 267  Q
    ||||||||||||||| |||||||||||||||||    
T  22356141 tgttaattcaattttctaaaaatcattttataa 22356173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 4e-51; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 141 - 330
Target Start/End: Original strand, 40858604 - 40858798
Alignment:
Q  141 gggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaattaa-----gtgtttttgaagtattacatgatcattgatcatgct 235  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||     ||||||||||||||||| ||||||||| |||||| |    
T  40858604 gggagggctcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaatttagtgtttttgaagtattatatgatcatttatcatgtt 40858703  T
Q  236 gttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcctaaaccctcttcccaaacacaccc 330  Q
    ||||||||||||||  ||| ||||||||||||||||  ||| ||||||||| ||  ||| ||||||||||||||||||||   ||||||||||||    
T  40858704 gttaattcaattttcaaaagatcattttataatgtccgtaatttaaaaaagaaaactaaaccctcccctcctaaaccctccatccaaacacaccc 40858798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 103 - 331
Target Start/End: Original strand, 41414078 - 41414313
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaattaagt 201  Q
    ||||| ||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||| ||| |    
T  41414078 agggtatgtttagattgagggtttaggagggaaagggaggggagggctcacttttattttttaaattatgaacaaggtaaaatgtttttttaaaataaat 41414177  T
Q  202 -----gtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaatt-aaaaaaggaatgtaag 295  Q
         ||||||||||||||| ||||||||| |||||| |||||| |||||||| |||||||||||||||||||||  | | || ||||||| || ||||     
T  41414178 caagcgtttttgaagtattatatgatcatttatcatgttgttaactcaattttctaaaaatcattttataatgtccctgatttaaaaaaagaaaagtaaa 41414277  T
Q  296 ccctcccctcctaaaccctcttcccaaacacaccct 331  Q
    | |||||||||||||||| |   |||||||||||||    
T  41414278 cactcccctcctaaacccaccatccaaacacaccct 41414313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 137 - 306
Target Start/End: Original strand, 34641027 - 34641199
Alignment:
Q  137 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaagtgtttttgaagtattacatgatcattgatca 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |  ||||     ||||||||||||||||||||||||| ||||||||| ||||    
T  34641027 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaaggattttttaaaataaattaagtgtttttgaagtattatatgatcatttatca 34641126  T
Q  232 tgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcc 306  Q
    || ||||||||||||||| |  ||||||||||||||||||  ||| ||||||||| || ||||||||||||||||    
T  34641127 tgttgttaattcaattttct--aaatcattttataatgtccgtaatttaaaaaagaaaagtaagccctcccctcc 34641199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 109 - 304
Target Start/End: Complemental strand, 16884209 - 16884010
Alignment:
Q  109 tgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaagtg 202  Q
    ||||||||||||||||| ||||| |||||||| |  | | |||||||||||||||||| |||||||||||||||||||||||||     |||||||||||    
T  16884209 tgtttggattgagggtttaggagaggaagggatgataagactcacttttattttttaagttacgaacaatgtaaaatgtctttttaaaataaattaagtg 16884110  T
Q  203 tttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctccc 302  Q
    |||||||||||||| ||||||||| |||||| |||| |||||||||||||||| |  |||||| || | | ||||||||||||| |||||||||||||||    
T  16884109 tttttgaagtattatatgatcatttatcatgttgtt-attcaattttttaaaattttttttat-atatttgtaaattaaaaaagaaatgtaagccctccc 16884012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 107 - 286
Target Start/End: Complemental strand, 17474446 - 17474261
Alignment:
Q  107 tgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaag 200  Q
    ||||||||||||||||||| |||||||||||||||||||| | | ||||||||||||||||||||||| |||||||||| | ||||     |||||||||    
T  17474446 tgtgtttggattgagggttgaggaggggaagggaggggagagttaacttttattttttaaattacgaataatgtaaaatattttttaaaaataaattaag 17474347  T
Q  201 tgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 286  Q
    ||||||||||||||||  |||| ||| |||||  |||||||||||||||| |||||| |||||||||||||  ||| |||||||||    
T  17474346 tgtttttgaagtattatttgattatttatcatattgttaattcaatttttaaaaaattattttataatgtccgtaatttaaaaaag 17474261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 137 - 331
Target Start/End: Original strand, 48683647 - 48683848
Alignment:
Q  137 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaagtgtttttgaagtattacatgatcattgatc- 230  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||     ||||||||||||||||||| ||||| ||||||||| |||     
T  48683647 ggaggggaggactcacttttatttcttaaattacgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaaatattatatgatcatttatca 48683746  T
Q  231 atgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag-gaatgtaagccctcccctcctaaaccctcttcccaaacacacc 329  Q
    ||| ||||||||||||||  ||||||||||||||||||||   ||| |||||||||  ||  ||| |||||||||||||||||||||  |||||||||||    
T  48683747 atgttgttaattcaatttcctaaaaatcattttataatgttcgtaatttaaaaaagaaaaaataaaccctcccctcctaaaccctctatccaaacacacc 48683846  T
Q  330 ct 331  Q
    ||    
T  48683847 ct 48683848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 109 - 286
Target Start/End: Complemental strand, 10943852 - 10943669
Alignment:
Q  109 tgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtg 202  Q
    ||||||||||||||||| | ||||| ||| |||||||||| ||||||||| |||||||||||||||||||| ||||||| ||||||||     |||||||    
T  10943852 tgtttggattgagggtttatgagggaaagagaggggagggttcacttttaatttttaaattacgaacaatgcaaaatgtttttttaaaataaattaagtg 10943753  T
Q  203 tttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 286  Q
    |||||||||||||| || || ||| || ||| ||||||||||||||| |||||||||||||||||| ||| ||| |||||||||    
T  10943752 tttttgaagtattatataattatttattatgttgttaattcaattttctaaaaatcattttataatatctataatttaaaaaag 10943669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 106 - 283
Target Start/End: Complemental strand, 21090312 - 21090129
Alignment:
Q  106 gtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaa 199  Q
    ||||||||||||||| |||| ||||| |||||||||| |||| |||||||||||||||||||||| |||||||||||||| | ||||     ||||||||    
T  21090312 gtgtgtttggattgatggtttaggagaggaagggaggagaggactcacttttattttttaaattatgaacaatgtaaaatatttttttaaaataaattaa 21090213  T
Q  200 gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaa 283  Q
    ||||||||||||||||| ||||| ||  |||||| |||||||||||||||  ||||||| ||||||||| ||| ||| ||||||    
T  21090212 gtgtttttgaagtattatatgataatatatcatgttgttaattcaattttcaaaaaatcgttttataatatctgtaatttaaaa 21090129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 103 - 264
Target Start/End: Original strand, 44412361 - 44412528
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 196  Q
    |||||||||||| |||||||||| ||||||||||| ||||||||| |||| ||||  |||||||||||||||||||||||||  | ||||     |||||    
T  44412361 agggtgtgtttgaattgagggtttaggaggggaagagaggggaggactcattttttatttttaaattacgaacaatgtaaaacatttttttaaaataaat 44412460  T
Q  197 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcatttta 264  Q
    |||||||||||||||||||| ||||| ||| |||||| |||||||||||||||  |||||||||||||    
T  44412461 taagtgtttttgaagtattatatgatgatttatcatgttgttaattcaattttcaaaaaatcatttta 44412528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 132 - 306
Target Start/End: Original strand, 26135827 - 26136006
Alignment:
Q  132 ggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaagtgtttttgaagtattacatgatcatt 226  Q
    ||||| || |||||| |||||||||||||||||||||| |||||||||||||||| ||||     ||||||||||||||||||||||||| || || |||    
T  26135827 ggaagagaagggaggactcacttttattttttaaattatgaacaatgtaaaatgttttttaaaaataaattaagtgtttttgaagtattatataattatt 26135926  T
Q  227 gatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcc 306  Q
     |||||  |||||||||||||||  |||||| |||||||||||||  ||| ||||||||| || |||| |||||| ||||    
T  26135927 tatcatattgttaattcaattttcaaaaaattattttataatgtccgtaatttaaaaaagaaaagtaaaccctccactcc 26136006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 103 - 286
Target Start/End: Original strand, 24253721 - 24253911
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggagggg-agggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa----- 195  Q
    ||||||||||||||||||||||| ||||||| |||||||||| || | ||||||||| ||||||||||| || |||||||||||   ||||||||         
T  24253721 agggtgtgtttggattgagggtttaggagggaaagggagggggagtgttcacttttaatttttaaattatgagcaatgtaaaataattttttaaaataaa 24253820  T
Q  196 ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 286  Q
    ||||||||||||||||| ||| || |||||| |||||| ||||||||||| ||| ||||| |||||||||||||||  ||| |||||||||    
T  24253821 ttaagtgtttttgaagtgttatataatcatttatcatgttgttaattcaactttctaaaactcattttataatgtccgtaatttaaaaaag 24253911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 105 - 315
Target Start/End: Original strand, 42772046 - 42772250
Alignment:
Q  105 ggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaattaagtgt 203  Q
    |||||||||||||||| |||| | ||||||||||||||||||| |||||||||||||||||||||||      |  ||||        ||||||||||||    
T  42772046 ggtgtgtttggattgaaggtttaagaggggaagggaggggaggactcacttttattttttaaattacttttttttgaaaaa-------taaattaagtgt 42772138  T
Q  204 ttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccc 303  Q
    ||||||||||||| ||||||||| |||||| |||||||||||||||  ||||||||||||||||||||  ||| || || ||| || |||| || |||||    
T  42772139 ttttgaagtattatatgatcatttatcatgttgttaattcaattttcaaaaaatcattttataatgtccgtaattttaagaagcaaagtaaaccttcccc 42772238  T
Q  304 tcctaaaccctc 315  Q
    ||||||||||||    
T  42772239 tcctaaaccctc 42772250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 115 - 302
Target Start/End: Complemental strand, 18086218 - 18086019
Alignment:
Q  115 gattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt----------aaattaagtgt 203  Q
    ||||||||||| | ||||||| ||||||| | |||||||| |||||||||||||||| ||||||||||| ||| |||||          |||||||||||    
T  18086218 gattgagggtttatgaggggatgggagggtaaggctcactattattttttaaattactaacaatgtaaattgttttttttttctcaaataaattaagtgt 18086119  T
Q  204 ttttgaagtattacatgatcattg-atcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctccc 302  Q
    ||||||||||||  |||||||||  || ||| ||||||||||||||| |||||| ||||||||||||||| ||| ||||||||| || |||||| |||||    
T  18086118 ttttgaagtattttatgatcattttattatgttgttaattcaattttctaaaaaacattttataatgtctgtaatttaaaaaagaaaagtaagctctccc 18086019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 305
Target Start/End: Complemental strand, 8432462 - 8432297
Alignment:
Q  143 gagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtgtttttgaagtattacatgatcattgatcatgctgt 237  Q
    ||||| ||| ||||| |||||||| ||||||||||| ||||||| ||||||||     ||||||||||||||||||||| |  || ||| |||||| |||    
T  8432462 gagggttcaattttaatttttaaactacgaacaatgaaaaatgtttttttaaaatgaattaagtgtttttgaagtattataaaattatttatcatgttgt 8432363  T
Q  238 taattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctc 305  Q
    |||||||||||| |||||||||||||||||||||| ||| | ||||||  || ||||| |||||||||    
T  8432362 taattcaattttgtaaaaatcattttataatgtctgtaattaaaaaaa--aaagtaagtcctcccctc 8432297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 137 - 264
Target Start/End: Original strand, 46978462 - 46978594
Alignment:
Q  137 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtgtttttgaagtattacatgatcattgatca 231  Q
    ||||||||||| ||||||||| ||||||||||||||||  |||||||||| ||||||||     |||| |||||||||||||||| || |||||| ||||    
T  46978462 ggaggggagggttcacttttaatttttaaattacgaacggtgtaaaatgtttttttaaaataaattaaatgtttttgaagtattatataatcatttatca 46978561  T
Q  232 tgctgttaattcaattttttaaaaatcatttta 264  Q
    || |||||||| |||||| ||||||||||||||    
T  46978562 tgttgttaattaaattttataaaaatcatttta 46978594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 44412603 - 44412522
Alignment:
Q  105 ggtgtgtttggattgagggttag-gaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 185  Q
    |||||||||||||||| |||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44412603 ggtgtgtttggattgatggtttgtgaggggaagggaggggaggactcacttttattttttaaattacgaacaatgtaaaatg 44412522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 137 - 284
Target Start/End: Complemental strand, 42699821 - 42699669
Alignment:
Q  137 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaagtgtttttgaagtattacatgatcattgatca 231  Q
    |||||||||| |||||||||  ||||||||||||||||||| |||||| | |||      ||||||||||||||||||||||||| ||||||||| ||||    
T  42699821 ggaggggaggactcactttttgtttttaaattacgaacaatataaaatatttttaaaaaataaattaagtgtttttgaagtattatatgatcatttatca 42699722  T
Q  232 tgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaa 284  Q
    |  || |||||||||||| ||||| | |||||||||||||  ||| |||||||    
T  42699721 tattgataattcaattttctaaaatttattttataatgtccataatttaaaaa 42699669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 96 - 256
Target Start/End: Complemental strand, 27197900 - 27197734
Alignment:
Q  96 cactcttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt--- 191  Q
    |||||| |||||||||||| ||||| |||| | ||| ||||| ||  ||||| |||||||||||||||||||||||||||||||||| || | ||||       
T  27197900 cactctaagggtgtgtttgaattgaaggtttaagagaggaagagaaaggaggactcacttttattttttaaattacgaacaatgtaacatatttttttaa 27197801  T
Q  192 --taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaa 256  Q
      |||||||||| | ||| |||||||| ||||||||  |||||| ||||||||||||||| ||||||    
T  27197800 aataaattaagtatatttaaagtattatatgatcatctatcatgttgttaattcaattttctaaaaa 27197734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 103 - 185
Target Start/End: Complemental strand, 34641234 - 34641151
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 185  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||| |||||| |||||||||||||| ||| | |||||||    
T  34641234 agggtgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttcttttttaaattacggacattataaaatg 34641151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 28582755 - 28582684
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    |||||||||||||||| ||||| || |||||||||||||||||||||| | |||||| ||||||||||||||    
T  28582755 ttagggtgtgtttggactgaggatttaggaggggaagggaggggagggtttacttttcttttttaaattacg 28582684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 103 - 195
Target Start/End: Original strand, 24560217 - 24560310
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 195  Q
    |||||||||||||||| |||||| |||||||||||||||||||||| |   |||| |||||||||||||| || |||||| |||| ||| ||||    
T  24560217 agggtgtgtttggattaagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacggactatgtaacatgtttttctaaa 24560310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 270
Target Start/End: Original strand, 36727242 - 36727349
Alignment:
Q  167 ttacgaacaatgtaaaatgt-ctttttaaat---taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattt 262  Q
    |||| ||||||||||||||| ||||| ||||   |||||||||||||||||||| ||||| ||| |||||| |||||| | |||||| | ||||| ||||    
T  36727242 ttactaacaatgtaaaatgttcttttaaaataaataagtgtttttgaagtattatatgataatttatcatgttgttaagttaattttcttaaaattattt 36727341  T
Q  263 tataatgt 270  Q
    ||||||||    
T  36727342 tataatgt 36727349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 101 - 182
Target Start/End: Complemental strand, 5962014 - 5961933
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaa 182  Q
    |||||||||||||| |||||||||| ||||||| |||||||| || | ||||||||| ||||| ||||||| |||||||||||    
T  5962014 ttagggtgtgtttgtattgagggtttaggaggg-aagggaggtgaagactcacttttgtttttaaaattacaaacaatgtaaa 5961933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 185
Target Start/End: Complemental strand, 24253968 - 24253883
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 185  Q
    ||||||||||||||||| ||||||| || |||||||||||||| |||  | |||||| |||||||||||||| ||| | |||||||    
T  24253968 ttagggtgtgtttggatggagggtttagaaggggaagggagggaaggatttacttttcttttttaaattacggacattataaaatg 24253883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 331
Target Start/End: Complemental strand, 30200345 - 30200098
Alignment:
Q  97 actcttagggtgtgtttggattgagggt-----taggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttt- 190  Q
    ||||| |||||||||||||||||||||      |||||||||||||||||| |||| | |||||| |||||||||||||| || || ||| |||| |||     
T  30200345 actctaagggtgtgtttggattgagggagggtataggaggggaagggagggaagggtttacttttcttttttaaattacggactatataacatgtttttc 30200246  T
Q  191 ----ttaaattaagtgtttttgaagtattacatgatcattgatcatgctgttaat---tcaattttttaaaaatcattttataatgtctttaaattaaaa 283  Q
         ||||| ||||||  || ||||| || |||||| ||| | ||  |||||||   | || |||||||||| ||||| ||| ||||  ||| ||||||    
T  30200245 taaaataaatcaagtgtgattaaagtactatatgatcgttgtttattatgttaatatgtaaactttttaaaaaacatttcatagtgtccgtaatttaaaa 30200146  T
Q  284 aaggaatgtaagccctcccctcctaaaccctcttcccaaacacaccct 331  Q
    | | ||  ||| ||||||||||||||||||||   |||||||||||||    
T  30200145 atgaaaactaaaccctcccctcctaaaccctccatccaaacacaccct 30200098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 222 - 338
Target Start/End: Complemental strand, 54985812 - 54985696
Alignment:
Q  222 tcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcctaaaccctcttccca 321  Q
    ||||| |||||  ||||||||||||||| ||||||||| |||||||||||  ||| ||||||| | ||  ||||| ||| ||| ||||||||||   |||    
T  54985812 tcatttatcatattgttaattcaattttctaaaaatcaatttataatgtccgtaatttaaaaacgaaaactaagctctctccttctaaaccctcaatcca 54985713  T
Q  322 aacacacccttaataaa 338  Q
    ||||||| |||| ||||    
T  54985712 aacacactcttagtaaa 54985696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 101 - 195
Target Start/End: Complemental strand, 220643 - 220548
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 195  Q
    ||||||| ||||||||| ||||||| |||||| |||||||||||||   | |||||| |||||||||||||| || |||||| |||| ||| ||||    
T  220643 ttagggtctgtttggatggagggtttaggaggagaagggaggggagaatttacttttcttttttaaattacggactatgtaacatgtttttctaaa 220548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 175
Target Start/End: Original strand, 25654968 - 25655043
Alignment:
Q  100 cttagggtgtgtttggattgagggttaggaggggaagggaggggagggctcacttttattttttaaattacgaaca 175  Q
    |||||||||| ||| ||| |||  |||||||||||||||||||||||| | ||||||  |||||| ||||||||||    
T  25654968 cttagggtgtatttagatggagatttaggaggggaagggaggggagggtttacttttcatttttatattacgaaca 25655043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 98 - 170
Target Start/End: Complemental strand, 24560466 - 24560393
Alignment:
Q  98 ctcttagggtgtgtttggattgaggg-ttaggaggggaagggaggggagggctcacttttattttttaaattac 170  Q
    |||||||||||||||||||| ||||| |||||||||||| ||| ||||| | | ||||||  ||||||||||||    
T  24560466 ctcttagggtgtgtttggatggagggtttaggaggggaacggatgggagagtttacttttcatttttaaattac 24560393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 171
Target Start/End: Complemental strand, 41110565 - 41110496
Alignment:
Q  103 agggtgtgtttggattgagggttag-gaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    ||||||||||||||||||||||| | ||||||||||||| ||| || | ||||||  |||||||||||||    
T  41110565 agggtgtgtttggattgagggtttgtgaggggaagggagaggaaggtttacttttcgtttttaaattacg 41110496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 55428492 - 55428553
Alignment:
Q  210 agtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 271  Q
    ||||||| ||||||||| |||| | ||||||||||||||| |||||||||| || |||||||    
T  55428492 agtattatatgatcatttatcacgttgttaattcaattttctaaaaatcatcttgtaatgtc 55428553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 171
Target Start/End: Complemental strand, 55428619 - 55428554
Alignment:
Q  107 tgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacg 171  Q
    ||||||||||||||||||| ||||||||||||||||||| |  | |||||| || |||||||||||    
T  55428619 tgtgtttggattgagggtttaggaggggaagggaggggatgatttacttttcttctttaaattacg 55428554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 26136019 - 26135959
Alignment:
Q  124 ttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaat 184  Q
    ||||||||||||||||| |||||| | |||||| |||||||||||||| ||| | ||||||    
T  26136019 ttaggaggggaagggagtggagggtttacttttcttttttaaattacggacattataaaat 26135959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 335
Target Start/End: Complemental strand, 37102243 - 37102155
Alignment:
Q  247 tttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcctaaaccctcttcccaaacacacccttaat 335  Q
    |||||||||| ||||| ||| ||||  ||| ||||||| | ||  ||| ||||||||||||||||||||   |||||||||||||||||    
T  37102243 tttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaactaaaccctcccctcctaaaccctccatccaaacacacccttaat 37102155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 25655216 - 25655171
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggaggg 147  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||    
T  25655216 agggtgtgtttggattgagggttgaagaggagaagggaggggaggg 25655171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 169
Target Start/End: Original strand, 27541937 - 27541998
Alignment:
Q  109 tgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaatta 169  Q
    ||||||||||||||||| |||||||||||||||| || || |||| |||  |||||||||||    
T  27541937 tgtttggattgagggtttaggaggggaagggaggagatggttcacatttcatttttaaatta 27541998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 137
Target Start/End: Complemental strand, 37102385 - 37102348
Alignment:
Q  101 ttagggtgtgtttggattgaggg-ttaggaggggaagg 137  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  37102385 ttagggtgtgtttggattgagggtttaggaggggaagg 37102348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 54574604 - 54574563
Alignment:
Q  99 tcttagggtgtgtttggattgaggg-ttaggaggggaaggga 139  Q
    ||||||||||||||||||||||||| |||||| |||||||||    
T  54574604 tcttagggtgtgtttggattgagggtttaggaagggaaggga 54574563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 145
Target Start/End: Complemental strand, 18654842 - 18654802
Alignment:
Q  106 gtgtgtttggattgagggtt-aggaggggaagggaggggag 145  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  18654842 gtgtgtttgaattgagggtttaggaggggaagggaggggag 18654802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 93; Significance: 4e-45; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 103 - 271
Target Start/End: Complemental strand, 1642 - 1467
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttt------ttaaa 195  Q
    |||||||||||| |||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||       ||||    
T  1642 agggtgtgtttgaattgagggtttaggagaggaatggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtttttctttaaataaa 1543  T
Q  196 ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 271  Q
    |||||| ||||| |||||||| ||||||||| |||| | ||||||||||||||| ||||||||||| |||||||||    
T  1542 ttaagtattttttaagtattatatgatcatttatcaagttgttaattcaattttctaaaaatcattctataatgtc 1467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 1175 - 1256
Alignment:
Q  106 gtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgt 186  Q
    |||||||||||||||||||| ||||||||||| |||||||| | | |||||| |||||||||||||| || |||||| ||||    
T  1175 gtgtgtttggattgagggtttaggaggggaagagaggggagagtttacttttcttttttaaattacggactatgtaacatgt 1256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 86; Significance: 5e-41; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 103 - 286
Target Start/End: Original strand, 37383 - 37572
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 196  Q
    |||||| ||||| ||||||| || ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||     |||||    
T  37383 agggtgcgtttgaattgaggatttaggagggcaaggaaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaat 37482  T
Q  197 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 286  Q
     ||||||||||||||| ||| ||||||| | |||||| |||||||| | |||| |||||||||| ||||| ||||| ||| |||||||||    
T  37483 caagtgtttttgaagtgttatatgatcacttatcatgttgttaattaagttttctaaaaatcatcttatattgtctgtaatttaaaaaag 37572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 103 - 224
Target Start/End: Original strand, 30715 - 30843
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt------taaa 195  Q
    |||||| ||||||||||||| || ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||      ||||    
T  30715 agggtgcgtttggattgaggatttaggaggacaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtttttttttaaataaa 30814  T
Q  196 ttaagtgtttttgaagtattacatgatca 224  Q
    ||||||||||||||||| ||| |||||||    
T  30815 ttaagtgtttttgaagtgttatatgatca 30843  T

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Target: scaffold0071 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 148 - 336
Target Start/End: Original strand, 52932 - 53122
Alignment:
Q  148 ctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaat----taagtgtttttgaagtattacatgatcattgatcatgctgttaattc 243  Q
    ||||||||||||||||||||||| ||||||||||||| | |||||||||    |||||||||||||| ||||| ||||||||| |||||| ||||| |||    
T  52932 ctcacttttattttttaaattacaaacaatgtaaaatatttttttaaatacattaagtgtttttgaaatattatatgatcatttatcatgttgttagttc 53031  T
Q  244 aattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcctaaaccctcttcccaaacacacccttaata 336  Q
    ||||||  ||||||||||| |||||| |  ||| ||||||||| || |||  |  |  ||||||||||||||   ||||||||||||||||||    
T  53032 aattttcaaaaaatcatttcataatgcccataatttaaaaaagaaaagta--cattgtcctcctaaaccctccatccaaacacacccttaata 53122  T

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Target: scaffold0007 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 192 - 306
Target Start/End: Original strand, 242311 - 242425
Alignment:
Q  192 taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatg 291  Q
    ||||| |||| |||||||| ||||| || |||||| ||||||  ||||||||||||||||||||||||||||||||||||  ||| ||||||||| || |    
T  242311 taaatgaagtatttttgaattattatatcatcatttatcatgtcgttaattcaattttttaaaaatcattttataatgtccgtaatttaaaaaagaaaag 242410  T
Q  292 taagccctcccctcc 306  Q
    ||| |||||||||||    
T  242411 taaaccctcccctcc 242425  T

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Target: scaffold0007; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 242433 - 242377
Alignment:
Q  129 aggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 185  Q
    ||||||||||||||||||| | |||||| |||||||||||||| ||| | |||||||    
T  242433 aggggaagggaggggagggtttacttttcttttttaaattacggacattataaaatg 242377  T

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Target: scaffold0012 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 137 - 286
Target Start/End: Original strand, 184636 - 184796
Alignment:
Q  137 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt----------aaattaagtgtttt-tgaagtattacatgatcat 225  Q
    ||||||||||| ||||||||||||||||||||| |||| || |||||||| |||||          |||||||||||||| |||||||||| ||||| ||    
T  184636 ggaggggagggttcacttttattttttaaattatgaactatataaaatgtttttttttttttaaataaattaagtgttttttgaagtattatatgataat 184735  T
Q  226 tgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 286  Q
      |||||| |||||||||||||||  ||||||||||||||||||||  ||| |||||||||    
T  184736 atatcatgttgttaattcaattttaaaaaaatcattttataatgtccataatttaaaaaag 184796  T

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Target: scaffold1414 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold1414
Description:

Target: scaffold1414; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 157 - 268
Target Start/End: Original strand, 355 - 473
Alignment:
Q  157 attttttaaattacgaacaatgtaaaatgtctttttaa------attaagtgtttttgaagtattacatgatcattgatcatgctgttaa-ttcaatttt 249  Q
    |||||||| ||||||||||| ||||||||| ||||| |      |||||||||||||||||||||  || |||||| ||||||||||||| || ||||||    
T  355 attttttatattacgaacaacgtaaaatgttttttttataaataattaagtgtttttgaagtattttattatcatttatcatgctgttaattttaatttt 454  T
Q  250 ttaaaaatcattttataat 268  Q
     ||||||||||||||||||    
T  455 ctaaaaatcattttataat 473  T

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Target: scaffold0067 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 103 - 195
Target Start/End: Complemental strand, 39434 - 39341
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 195  Q
    ||||||||||||||||||||||| || |||| |||||||||||||| | |||||| |||||||||||||| || |||||| |||| ||| ||||    
T  39434 agggtgtgtttggattgagggtttagaagggaaagggaggggagggtttacttttcttttttaaattacggactatgtaacatgtttttctaaa 39341  T

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Target: scaffold0067; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 39184 - 39256
Alignment:
Q  101 ttagggtgtgtttggattgaggg-ttaggaggggaaggga-ggggagggctcacttttattttttaaattacg 171  Q
    ||||||||||||||||| ||||| ||||||||||||  || |||||||| | ||||||  |||||||||||||    
T  39184 ttagggtgtgtttggatggagggtttaggaggggaaatgagggggagggtttacttttcatttttaaattacg 39256  T

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Target: scaffold0240 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 197 - 286
Target Start/End: Original strand, 17640 - 17729
Alignment:
Q  197 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 286  Q
    ||||||| |||||||||||| ||||| ||| |||||| || ||||||||||||  ||||||||||||||||| | | ||| |||||||||    
T  17640 taagtgtatttgaagtattatatgattatttatcatgttgctaattcaattttcaaaaaatcattttataatatttgtaatttaaaaaag 17729  T

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Target: scaffold0240; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 97 - 170
Target Start/End: Complemental strand, 17788 - 17716
Alignment:
Q  97 actcttagggtgtgtttggattgaggg-ttaggaggggaagggaggggagggctcacttttattttttaaattac 170  Q
    ||||| ||||||||||||||| ||||| ||||||| |||||||||||  ||| | |||||| |||||||||||||    
T  17788 actctaagggtgtgtttggatggagggtttaggagtggaagggaggg--gggtttacttttcttttttaaattac 17716  T

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Target: scaffold0096 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 101 - 170
Target Start/End: Original strand, 6582 - 6652
Alignment:
Q  101 ttagggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattac 170  Q
    |||||||||||||||||||| | || |||||| ||||||||||||||| | |||||| |||||||||||||    
T  6582 ttagggtgtgtttggattgaagttttaggaggagaagggaggggagggtttacttttcttttttaaattac 6652  T

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Target: scaffold0198 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 3150 - 3215
Alignment:
Q  106 gtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattac 170  Q
    |||||||||||||||| ||| |||||||||||||||||||| | | |||||| |||||||||||||    
T  3150 gtgtgtttggattgagagtttaggaggggaagggaggggagagtttacttttcttttttaaattac 3215  T

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Target: scaffold0262 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 175
Target Start/End: Original strand, 16296 - 16369
Alignment:
Q  103 agggtgtgtttggattgagggtt-aggaggggaagggaggggagggctcacttttattttttaaattacgaaca 175  Q
    ||||| ||||||||| ||||||| ||||||| || ||||||||||| | ||||||  ||||||||||| |||||    
T  16296 agggtttgtttggatggagggtttaggagggaaaaggaggggagggtttacttttcatttttaaattatgaaca 16369  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 81546 - 81498
Alignment:
Q  206 ttgaagtattacatgatcattgatcatgctgttaattcaattttttaaa 254  Q
    ||||||||||| ||||||||| |||||| | ||| ||||||||||||||    
T  81546 ttgaagtattatatgatcatttatcatgttattatttcaattttttaaa 81498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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