View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11856_low_32 (Length: 394)
Name: NF11856_low_32
Description: NF11856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11856_low_32 |
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Alignment Details
Target: chr7 (Bit Score: 384; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 384; E-Value: 0
Query Start/End: Original strand, 1 - 384
Target Start/End: Complemental strand, 34331798 - 34331415
Alignment:
| Q |
1 |
agccataaatcaagttgggaaacaatccgttcaagggaaaaagtgattccggcaaattttggtctttgtaatagtaaacttcattgttctagagtcttgt |
100 |
Q |
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| T |
34331798 |
agccataaatcaagttgggaaacaatccgttcaagggaaaaagtgattccggcaaattttggtctttgtaatagtaaacttcattgttctagagtcttgt |
34331699 |
T |
|
| Q |
101 |
gatttatggaagctgcgagtgacatagacctaacattattttatcattcaaagacaatgatttggacaacgtgcataacttgtataaatataatagcata |
200 |
Q |
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| T |
34331698 |
gatttatggaagctgcgagtgacatagacctaacattattttatcattcaaagacaatgatttggacaacgtgcataacttgtataaatataatagcata |
34331599 |
T |
|
| Q |
201 |
tgatatgacattgagtaataatagcaataacaggtgtcaaaaattagaagagcttataatctctgccccataaatcaacatagaatactacattacatat |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34331598 |
tgatatgacattgagtaataatagcaataacaggtgtcaaaaattagaagagcttataatctctgccccataaatcaacatagaatactacattacatat |
34331499 |
T |
|
| Q |
301 |
atgtttgtgcaaataaaatggctctatgatctatctaaatggcataagtcatggcattgagcttcacaattaagtaactctctg |
384 |
Q |
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| T |
34331498 |
atgtttgtgcaaataaaatggctctatgatctatctaaatggcataagtcatggcattgagcttcacaattaagtaactctctg |
34331415 |
T |
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