View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11856_low_40 (Length: 360)

Name: NF11856_low_40
Description: NF11856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11856_low_40
NF11856_low_40
[»] chr8 (37 HSPs)
chr8 (13-210)||(28929850-28930048)
chr8 (99-217)||(32414460-32414578)
chr8 (88-212)||(39860113-39860239)
chr8 (240-338)||(29091150-29091252)
chr8 (137-212)||(8373667-8373742)
chr8 (166-213)||(38576305-38576352)
chr8 (163-217)||(27441464-27441518)
chr8 (158-212)||(31641514-31641568)
chr8 (166-212)||(41974643-41974689)
chr8 (165-213)||(11686228-11686276)
chr8 (141-212)||(8372916-8372987)
chr8 (163-210)||(26654378-26654425)
chr8 (157-212)||(37732829-37732884)
chr8 (166-212)||(3165125-3165171)
chr8 (163-212)||(22320377-22320426)
chr8 (157-213)||(3043959-3044015)
chr8 (274-338)||(37810365-37810429)
chr8 (166-213)||(31602018-31602065)
chr8 (167-209)||(9197101-9197143)
chr8 (167-213)||(14825645-14825691)
chr8 (167-217)||(17725658-17725708)
chr8 (166-212)||(31642090-31642136)
chr8 (239-277)||(35020899-35020937)
chr8 (158-204)||(38628261-38628307)
chr8 (167-212)||(9197824-9197869)
chr8 (167-212)||(26652296-26652341)
chr8 (167-212)||(39778921-39778966)
chr8 (167-212)||(39779845-39779890)
chr8 (166-213)||(11686967-11687014)
chr8 (166-213)||(37025008-37025054)
chr8 (166-212)||(8996977-8997023)
chr8 (167-217)||(17724763-17724813)
chr8 (163-212)||(15198290-15198339)
chr8 (167-212)||(27442145-27442190)
chr8 (167-212)||(32979828-32979873)
chr8 (167-204)||(37064827-37064864)
chr8 (168-212)||(45925-45969)
[»] chr3 (52 HSPs)
chr3 (56-217)||(46149627-46149788)
chr3 (56-179)||(45080339-45080462)
chr3 (56-214)||(17603169-17603327)
chr3 (57-217)||(17603856-17604016)
chr3 (56-217)||(11652291-11652452)
chr3 (88-217)||(21727455-21727584)
chr3 (109-214)||(11653976-11654081)
chr3 (138-212)||(48648206-48648280)
chr3 (138-210)||(265074-265146)
chr3 (270-338)||(2780247-2780314)
chr3 (137-212)||(48649148-48649223)
chr3 (139-210)||(51827471-51827542)
chr3 (166-216)||(31974650-31974700)
chr3 (158-212)||(48765066-48765120)
chr3 (130-203)||(44699789-44699861)
chr3 (138-209)||(981673-981744)
chr3 (166-212)||(14871156-14871202)
chr3 (166-212)||(37988222-37988268)
chr3 (166-212)||(46150733-46150779)
chr3 (167-204)||(48413330-48413367)
chr3 (164-213)||(51469281-51469330)
chr3 (168-204)||(17605717-17605753)
chr3 (168-204)||(55373712-55373748)
chr3 (166-213)||(264468-264515)
chr3 (163-210)||(6974744-6974791)
chr3 (157-204)||(13477773-13477820)
chr3 (153-204)||(41458044-41458095)
chr3 (166-217)||(48507036-48507087)
chr3 (167-209)||(20212986-20213028)
chr3 (138-204)||(30222074-30222140)
chr3 (166-212)||(37520565-37520611)
chr3 (168-210)||(37987238-37987280)
chr3 (168-210)||(40872814-40872856)
chr3 (166-212)||(45081407-45081453)
chr3 (166-212)||(48764480-48764526)
chr3 (158-204)||(51826548-51826594)
chr3 (167-213)||(54458670-54458716)
chr3 (167-212)||(13477060-13477105)
chr3 (167-212)||(20213536-20213581)
chr3 (167-212)||(27082779-27082824)
chr3 (166-211)||(31115603-31115648)
chr3 (168-209)||(52282418-52282459)
chr3 (243-277)||(2779713-2779747)
chr3 (136-210)||(10847883-10847957)
chr3 (163-213)||(13349417-13349467)
chr3 (166-204)||(29856063-29856101)
chr3 (167-209)||(33277509-33277551)
chr3 (166-212)||(52266457-52266503)
chr3 (158-195)||(2092905-2092942)
chr3 (166-195)||(29856687-29856716)
chr3 (166-195)||(44699881-44699910)
chr3 (168-212)||(52605489-52605533)
[»] chr2 (50 HSPs)
chr2 (56-217)||(36238623-36238784)
chr2 (57-217)||(29513041-29513201)
chr2 (88-212)||(15902807-15902931)
chr2 (75-216)||(40252021-40252162)
chr2 (99-205)||(16692910-16693016)
chr2 (163-216)||(22301870-22301923)
chr2 (157-213)||(11750259-11750315)
chr2 (137-217)||(26588991-26589071)
chr2 (166-213)||(1297126-1297173)
chr2 (166-213)||(9275588-9275635)
chr2 (166-217)||(29719444-29719495)
chr2 (163-217)||(9540329-9540383)
chr2 (168-217)||(27177910-27177959)
chr2 (166-212)||(1296382-1296428)
chr2 (166-212)||(9276333-9276379)
chr2 (167-213)||(12725619-12725665)
chr2 (166-212)||(22560571-22560617)
chr2 (163-217)||(26752723-26752777)
chr2 (167-217)||(27178649-27178699)
chr2 (167-211)||(18820436-18820480)
chr2 (168-212)||(36237634-36237678)
chr2 (166-213)||(18174673-18174720)
chr2 (166-213)||(29559423-29559470)
chr2 (166-213)||(42182618-42182665)
chr2 (167-209)||(6584231-6584273)
chr2 (166-212)||(8542551-8542597)
chr2 (166-204)||(11007242-11007280)
chr2 (167-213)||(11751073-11751119)
chr2 (166-216)||(15774201-15774251)
chr2 (167-213)||(18174101-18174147)
chr2 (167-213)||(23857028-23857074)
chr2 (166-212)||(42459054-42459100)
chr2 (167-212)||(18821235-18821280)
chr2 (167-212)||(34812860-34812905)
chr2 (148-212)||(8541754-8541818)
chr2 (141-209)||(26588244-26588312)
chr2 (171-214)||(15290086-15290128)
chr2 (166-217)||(24933834-24933885)
chr2 (166-217)||(38361065-38361116)
chr2 (167-201)||(8669200-8669234)
chr2 (168-210)||(20432373-20432415)
chr2 (166-204)||(23343790-23343828)
chr2 (166-212)||(24121293-24121339)
chr2 (166-212)||(24754997-24755043)
chr2 (243-277)||(30517124-30517158)
chr2 (167-212)||(22301197-22301242)
chr2 (164-212)||(9541035-9541083)
chr2 (166-210)||(23856640-23856684)
chr2 (166-210)||(29512376-29512420)
chr2 (148-212)||(33512100-33512164)
[»] chr4 (69 HSPs)
chr4 (56-209)||(55976172-55976325)
chr4 (57-214)||(55976850-55977007)
chr4 (57-217)||(55000685-55000845)
chr4 (57-204)||(37273161-37273308)
chr4 (58-217)||(24551693-24551852)
chr4 (57-195)||(45920323-45920461)
chr4 (88-212)||(19550289-19550413)
chr4 (148-217)||(24551909-24551978)
chr4 (88-181)||(2181794-2181887)
chr4 (138-213)||(53772809-53772884)
chr4 (138-212)||(24158796-24158870)
chr4 (135-212)||(20774153-20774230)
chr4 (166-213)||(47688483-47688530)
chr4 (166-212)||(30573713-30573759)
chr4 (168-213)||(2444374-2444419)
chr4 (163-212)||(8248521-8248570)
chr4 (163-212)||(8266186-8266235)
chr4 (166-214)||(599305-599353)
chr4 (158-210)||(55001436-55001488)
chr4 (166-213)||(26147036-26147083)
chr4 (167-210)||(52871303-52871346)
chr4 (166-217)||(53732433-53732484)
chr4 (166-213)||(53773590-53773637)
chr4 (163-217)||(142525-142579)
chr4 (167-217)||(3654520-3654570)
chr4 (166-204)||(16903647-16903685)
chr4 (167-217)||(26159626-26159676)
chr4 (167-213)||(42882686-42882732)
chr4 (166-204)||(47785803-47785841)
chr4 (163-212)||(8247699-8247748)
chr4 (168-217)||(19080383-19080432)
chr4 (167-212)||(31329722-31329767)
chr4 (167-212)||(53147874-53147919)
chr4 (166-214)||(5046486-5046534)
chr4 (163-211)||(8265365-8265413)
chr4 (168-204)||(53733737-53733773)
chr4 (166-213)||(2446165-2446212)
chr4 (166-217)||(56262476-56262527)
chr4 (57-171)||(2771256-2771370)
chr4 (166-212)||(7841547-7841593)
chr4 (166-212)||(7842533-7842579)
chr4 (166-212)||(24374792-24374838)
chr4 (166-204)||(43146652-43146690)
chr4 (167-213)||(47687911-47687957)
chr4 (166-212)||(53148615-53148661)
chr4 (167-204)||(9365821-9365858)
chr4 (171-204)||(16903677-16903710)
chr4 (167-212)||(44792641-44792686)
chr4 (167-199)||(32088835-32088867)
chr4 (158-194)||(43146692-43146728)
chr4 (167-203)||(44469504-44469540)
chr4 (166-213)||(1866345-1866392)
chr4 (166-197)||(5046002-5046033)
chr4 (166-201)||(11938725-11938760)
chr4 (166-213)||(11939445-11939492)
chr4 (166-217)||(12920278-12920329)
chr4 (138-185)||(31328832-31328879)
chr4 (166-217)||(40347552-40347603)
chr4 (169-212)||(40495098-40495141)
chr4 (168-211)||(50184432-50184475)
chr4 (166-212)||(9365172-9365218)
chr4 (167-209)||(12919591-12919633)
chr4 (243-277)||(42559826-42559860)
chr4 (167-217)||(42880906-42880956)
chr4 (167-212)||(1465323-1465368)
chr4 (57-86)||(20774074-20774103)
chr4 (167-212)||(44791727-44791772)
chr4 (138-186)||(24157929-24157977)
chr4 (158-194)||(30573161-30573197)
[»] chr7 (60 HSPs)
chr7 (57-217)||(47719599-47719759)
chr7 (57-217)||(14305087-14305247)
chr7 (56-195)||(47718924-47719063)
chr7 (56-193)||(23900336-23900473)
chr7 (88-217)||(23901020-23901149)
chr7 (88-217)||(13785519-13785648)
chr7 (88-186)||(21493026-21493124)
chr7 (163-217)||(1417605-1417659)
chr7 (163-217)||(38225976-38226030)
chr7 (166-213)||(25342498-25342545)
chr7 (166-213)||(25343304-25343351)
chr7 (166-213)||(30660594-30660641)
chr7 (166-217)||(30661459-30661510)
chr7 (166-217)||(37949602-37949653)
chr7 (166-213)||(37950471-37950518)
chr7 (166-212)||(7668484-7668530)
chr7 (166-212)||(25599024-25599070)
chr7 (166-212)||(26636105-26636151)
chr7 (167-217)||(31278159-31278209)
chr7 (166-212)||(46428189-46428235)
chr7 (112-210)||(48669804-48669902)
chr7 (165-210)||(43065119-43065164)
chr7 (163-212)||(45099894-45099943)
chr7 (270-338)||(1468480-1468547)
chr7 (166-214)||(24389620-24389668)
chr7 (167-214)||(3029203-3029250)
chr7 (166-213)||(3772530-3772577)
chr7 (166-217)||(14686128-14686179)
chr7 (166-213)||(27948447-27948494)
chr7 (166-213)||(45161970-45162017)
chr7 (166-212)||(18977773-18977819)
chr7 (166-212)||(19067639-19067685)
chr7 (166-212)||(26636864-26636910)
chr7 (164-217)||(3688381-3688434)
chr7 (168-217)||(19068401-19068450)
chr7 (164-217)||(24453728-24453781)
chr7 (168-213)||(24719336-24719381)
chr7 (138-195)||(31954269-31954326)
chr7 (168-213)||(37395505-37395550)
chr7 (168-212)||(3903345-3903389)
chr7 (157-213)||(40273561-40273617)
chr7 (166-213)||(16664129-16664176)
chr7 (166-213)||(17638489-17638536)
chr7 (137-212)||(21496958-21497033)
chr7 (166-212)||(25343243-25343289)
chr7 (166-212)||(46428821-46428867)
chr7 (168-212)||(37706430-37706474)
chr7 (166-201)||(3027987-3028022)
chr7 (243-277)||(1469051-1469085)
chr7 (167-217)||(3689276-3689326)
chr7 (166-212)||(25599823-25599869)
chr7 (167-213)||(48718196-48718242)
chr7 (167-212)||(15305245-15305290)
chr7 (157-194)||(24581063-24581100)
chr7 (168-201)||(31277436-31277469)
chr7 (167-212)||(45099140-45099185)
chr7 (164-193)||(45162764-45162793)
chr7 (67-116)||(48670155-48670204)
chr7 (168-204)||(36378822-36378858)
chr7 (166-214)||(42421054-42421102)
[»] chr5 (49 HSPs)
chr5 (56-204)||(1283393-1283541)
chr5 (57-195)||(1281948-1282086)
chr5 (57-203)||(9407261-9407407)
chr5 (109-217)||(1281833-1281941)
chr5 (57-214)||(2313947-2314098)
chr5 (57-179)||(19129450-19129571)
chr5 (57-186)||(16538881-16539009)
chr5 (164-217)||(7632092-7632145)
chr5 (137-212)||(19359706-19359781)
chr5 (163-217)||(1554083-1554137)
chr5 (158-212)||(19128772-19128826)
chr5 (141-212)||(234703-234774)
chr5 (166-213)||(235593-235640)
chr5 (141-212)||(237799-237870)
chr5 (166-217)||(6476794-6476845)
chr5 (166-212)||(29046031-29046077)
chr5 (166-213)||(236932-236979)
chr5 (141-212)||(19360454-19360525)
chr5 (166-217)||(27364490-27364541)
chr5 (171-217)||(1283533-1283579)
chr5 (171-217)||(10554519-10554565)
chr5 (166-204)||(10554557-10554595)
chr5 (139-209)||(22799736-22799806)
chr5 (166-212)||(28705882-28705928)
chr5 (166-212)||(29087927-29087973)
chr5 (167-213)||(34600835-34600881)
chr5 (163-212)||(14478923-14478972)
chr5 (168-217)||(38056791-38056840)
chr5 (158-210)||(22798905-22798957)
chr5 (167-211)||(25858213-25858257)
chr5 (166-213)||(17071225-17071272)
chr5 (166-217)||(20854908-20854959)
chr5 (166-209)||(28705170-28705213)
chr5 (166-213)||(34600262-34600309)
chr5 (166-212)||(4084882-4084928)
chr5 (167-213)||(17071798-17071844)
chr5 (166-204)||(34709040-34709078)
chr5 (167-213)||(38057599-38057645)
chr5 (168-201)||(27363779-27363812)
chr5 (166-211)||(36038698-36038743)
chr5 (138-195)||(41045403-41045460)
chr5 (168-213)||(43510233-43510278)
chr5 (138-213)||(19366541-19366616)
chr5 (166-213)||(22212982-22213029)
chr5 (243-277)||(11571269-11571303)
chr5 (163-213)||(26880722-26880772)
chr5 (167-217)||(33006299-33006349)
chr5 (158-210)||(33005525-33005577)
chr5 (157-213)||(33471083-33471139)
[»] chr1 (56 HSPs)
chr1 (56-217)||(24991967-24992128)
chr1 (57-212)||(47967864-47968019)
chr1 (88-217)||(24992670-24992799)
chr1 (57-216)||(37577541-37577699)
chr1 (166-216)||(4433851-4433901)
chr1 (158-212)||(25469082-25469136)
chr1 (166-217)||(34309234-34309285)
chr1 (166-213)||(49680812-49680859)
chr1 (166-216)||(4439210-4439260)
chr1 (167-217)||(17172667-17172717)
chr1 (138-212)||(30663360-30663434)
chr1 (168-213)||(13142673-13142718)
chr1 (168-217)||(17171928-17171977)
chr1 (167-212)||(19172580-19172625)
chr1 (166-217)||(7558446-7558497)
chr1 (166-217)||(7559203-7559254)
chr1 (166-213)||(10121556-10121603)
chr1 (166-213)||(11704812-11704859)
chr1 (166-213)||(13262834-13262881)
chr1 (157-212)||(30663971-30664026)
chr1 (163-206)||(30931896-30931939)
chr1 (167-213)||(10120784-10120830)
chr1 (166-212)||(13263520-13263566)
chr1 (166-212)||(25468512-25468558)
chr1 (166-212)||(30932799-30932845)
chr1 (138-212)||(50271759-50271833)
chr1 (168-217)||(27256718-27256767)
chr1 (163-204)||(28182073-28182114)
chr1 (168-217)||(34308470-34308519)
chr1 (168-217)||(46391872-46391921)
chr1 (136-212)||(37853109-37853185)
chr1 (166-213)||(168891-168938)
chr1 (166-201)||(46812191-46812226)
chr1 (163-217)||(4134025-4134079)
chr1 (166-212)||(7406247-7406293)
chr1 (166-204)||(8987800-8987838)
chr1 (166-212)||(11548802-11548848)
chr1 (138-212)||(25672000-25672074)
chr1 (166-212)||(28181535-28181581)
chr1 (167-213)||(36390372-36390418)
chr1 (168-210)||(45818025-45818067)
chr1 (166-203)||(8988552-8988589)
chr1 (164-217)||(43252481-43252533)
chr1 (167-211)||(19171781-19171825)
chr1 (166-213)||(169631-169678)
chr1 (166-213)||(32038478-32038525)
chr1 (163-213)||(4135545-4135595)
chr1 (167-213)||(12761501-12761547)
chr1 (166-204)||(23026593-23026631)
chr1 (138-212)||(26118675-26118749)
chr1 (166-212)||(36389777-36389823)
chr1 (167-217)||(37576921-37576971)
chr1 (167-212)||(25671172-25671217)
chr1 (168-213)||(27790713-27790758)
chr1 (167-212)||(46909367-46909412)
chr1 (274-338)||(46314566-46314630)
[»] scaffold2007 (1 HSPs)
scaffold2007 (135-212)||(753-830)
[»] chr6 (28 HSPs)
chr6 (157-213)||(8488470-8488526)
chr6 (138-213)||(33435341-33435416)
chr6 (166-212)||(10171278-10171324)
chr6 (166-212)||(26529516-26529562)
chr6 (158-212)||(33436269-33436323)
chr6 (164-204)||(19311828-19311868)
chr6 (166-213)||(19322983-19323031)
chr6 (166-213)||(10171969-10172016)
chr6 (166-217)||(19323770-19323821)
chr6 (166-213)||(26528824-26528871)
chr6 (166-217)||(9441234-9441285)
chr6 (166-213)||(12344895-12344942)
chr6 (158-213)||(21133222-21133277)
chr6 (166-212)||(19311003-19311049)
chr6 (168-217)||(1366965-1367014)
chr6 (167-212)||(8489284-8489329)
chr6 (167-212)||(18227734-18227778)
chr6 (158-217)||(2512435-2512494)
chr6 (166-213)||(3623176-3623223)
chr6 (137-212)||(20833941-20834016)
chr6 (166-213)||(25060817-25060864)
chr6 (167-213)||(3623751-3623797)
chr6 (166-204)||(5861896-5861934)
chr6 (158-204)||(19653980-19654026)
chr6 (168-209)||(9441985-9442026)
chr6 (168-209)||(9442066-9442107)
chr6 (239-300)||(28844852-28844913)
chr6 (168-204)||(505547-505583)
[»] scaffold0085 (4 HSPs)
scaffold0085 (158-217)||(22066-22125)
scaffold0085 (166-204)||(15862-15900)
scaffold0085 (166-212)||(15025-15071)
scaffold0085 (166-212)||(15084-15130)
[»] scaffold0176 (1 HSPs)
scaffold0176 (167-212)||(26594-26639)
[»] scaffold0096 (1 HSPs)
scaffold0096 (141-209)||(39901-39969)
[»] scaffold0093 (1 HSPs)
scaffold0093 (157-213)||(23723-23779)
[»] scaffold0504 (1 HSPs)
scaffold0504 (168-212)||(5385-5429)
[»] scaffold0086 (1 HSPs)
scaffold0086 (166-213)||(8295-8342)
[»] scaffold1207 (1 HSPs)
scaffold1207 (167-204)||(1597-1634)
[»] scaffold1213 (1 HSPs)
scaffold1213 (167-210)||(1900-1943)
[»] scaffold0418 (1 HSPs)
scaffold0418 (169-212)||(6891-6934)
[»] scaffold0012 (1 HSPs)
scaffold0012 (173-204)||(181020-181051)
[»] scaffold0002 (1 HSPs)
scaffold0002 (166-212)||(428905-428951)


Alignment Details
Target: chr8 (Bit Score: 159; Significance: 1e-84; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 13 - 210
Target Start/End: Complemental strand, 28930048 - 28929850
Alignment:
Q  13 agcagagaccggaagaa-gaaagaatgaagacaggagaaacgttatttaggaaacaagaggatttttaggaaaggcgatatgaaatattgaatgcctaca 111  Q
    |||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28930048 agcatagaccggaagaacgaaagaatgaagacaggagaaacgtcatttaggaaacaagaggatttttaggaaaggagatatgaaatattgaatgcctaca 28929949  T
Q  112 ttaagattttcataaatgattattgacctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatc 210  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  28929948 ttaagatttttataaatgattattgacctttagattaaaagaaatgaaagtttaagatttggtgtcaacgaatccgttgacatctggtgtcaatggatc 28929850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 99 - 217
Target Start/End: Original strand, 32414460 - 32414578
Alignment:
Q  99 ttgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctgg 198  Q
    ||||||| | ||||||||||||| || ||| |||||||||| ||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  32414460 ttgaatgtccacattaagattttgatgaattattattgaccattagattaagagaaatgaacgcttaagatttggtgtcaacgaatccgttgacacctgg 32414559  T
Q  199 tgtcaagggatcctatctc 217  Q
    ||||||  |||||| ||||    
T  32414560 tgtcaacagatcctttctc 32414578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 88 - 212
Target Start/End: Complemental strand, 39860239 - 39860113
Alignment:
Q  88 gatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatcc- 186  Q
    ||||| |||||||||||| | ||||||| ||||| || ||| |||||||||| ||||||||| ||||| ||||| ||||||||||||||||||||||||     
T  39860239 gatataaaatattgaatgtccacattaatattttgatgaatcattattgaccattagattaagagaaatgaacgcttaagatttggtgtcaacgaatcct 39860140  T
Q  187 -gttgacacctggtgtcaagggatcct 212  Q
     |||||||||||||||||| |||||||    
T  39860139 tgttgacacctggtgtcaacggatcct 39860113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 240 - 338
Target Start/End: Original strand, 29091150 - 29091252
Alignment:
Q  240 ggacatatcacatgagaatgactaattt----atg-tgagaataaattacagccatcggattaaaaatgaatgactaagattaaaagataggttaagtga 334  Q
    ||||||||||||||||||||||| || |    ||| |||||||||||| |||||||| |||| |||| |||||||||||||| |||||||||||||||||    
T  29091150 ggacatatcacatgagaatgacttatgtgagaatggtgagaataaattgcagccatcagattgaaaaggaatgactaagatt-aaagataggttaagtga 29091248  T
Q  335 gttg 338  Q
    ||||    
T  29091249 gttg 29091252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 8373667 - 8373742
Alignment:
Q  137 acctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||| ||| ||||  |||| |||| ||||||||||||||||||||||||||| ||||||||| |||||||    
T  8373667 acctttagatcaaacgaaatcaacggttaatatttggtgtcaacgaatccgttgacacttggtgtcaacggatcct 8373742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 38576305 - 38576352
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  38576305 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatccta 38576352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 27441518 - 27441464
Alignment:
Q  163 ttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    |||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||    
T  27441518 ttaagatttgatgtcaacgaattcgttgacacctggtgtcaacggatcctatctc 27441464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 31641568 - 31641514
Alignment:
Q  158 aacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  31641568 aacggttaagatttggtgtcaacgaatccattgacacctggtgtcaatggatcct 31641514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 41974689 - 41974643
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  41974689 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 41974643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 11686276 - 11686228
Alignment:
Q  165 aagatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  11686276 aagatttggtgtcaacgaatccgttgacacctggtgccaatggatccta 11686228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 212
Target Start/End: Complemental strand, 8372987 - 8372916
Alignment:
Q  141 ttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||| ||| ||||  |||| |||| |||||||||||||||||||||||||||| |||||||| |||||||    
T  8372987 ttagatcaaacgaaatcaacgattaatatttggtgtcaacgaatccgttgacaccaggtgtcaacggatcct 8372916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 26654378 - 26654425
Alignment:
Q  163 ttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatc 210  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||    
T  26654378 ttaagatttggtgtcaacgaatccattgacacctggtgtcaacggatc 26654425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 212
Target Start/End: Complemental strand, 37732884 - 37732829
Alignment:
Q  157 gaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||| ||||| ||||||||||||||||||||||||||| |||||||| |||||||    
T  37732884 gaacgcttaagttttggtgtcaacgaatccgttgacaccaggtgtcaacggatcct 37732829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 3165125 - 3165171
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||    
T  3165125 agatttggtgtcaacgaatccgttgacacctgatgtcaacggatcct 3165171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 212
Target Start/End: Complemental strand, 22320426 - 22320377
Alignment:
Q  163 ttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||||||||||||||||||||  |||| |||||||    
T  22320426 ttaagatttggtgtcaacgaatccgttgacacctggcatcaacggatcct 22320377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 3043959 - 3044015
Alignment:
Q  157 gaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||| |||| ||||||||||||||||| ||||||||||||||||| | ||||||||    
T  3043959 gaacggttaacatttggtgtcaacgaattcgttgacacctggtgtcgacggatccta 3044015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 274 - 338
Target Start/End: Original strand, 37810365 - 37810429
Alignment:
Q  274 gaataaattacagccatcggattaaaaatgaatgactaagattaaaagataggttaagtgagttg 338  Q
    |||| ||||||||||||  |||||||| |||| | || |||||||||||||||||||||||||||    
T  37810365 gaatgaattacagccattagattaaaagtgaagggctgagattaaaagataggttaagtgagttg 37810429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 31602065 - 31602018
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||||    
T  31602065 agatttggtgtcaacgaattcgttgacacctggtgtcaaccgatccta 31602018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 9197143 - 9197101
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggat 209  Q
    |||||||||||||||||| ||||||||||||||||||| ||||    
T  9197143 gatttggtgtcaacgaattcgttgacacctggtgtcaacggat 9197101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 213
Target Start/End: Complemental strand, 14825691 - 14825645
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||||    
T  14825691 gatttgatgtcaacgaatccgttgacacctagtgtcaacggatccta 14825645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 17725658 - 17725708
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    |||||||||||||||||| |||||||||||| |||||| ||||||| ||||    
T  17725658 gatttggtgtcaacgaattcgttgacacctgctgtcaacggatcctgtctc 17725708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 31642090 - 31642136
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||| |||||||| |||||||||| |||||||    
T  31642090 agatttggtgtcaacgaattcgttgacatctggtgtcaatggatcct 31642136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 277
Target Start/End: Complemental strand, 35020937 - 35020899
Alignment:
Q  239 aggacatatcacatgagaatgactaatttatgtgagaat 277  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  35020937 aggacatatcacatgagaatgactattttatgtgagaat 35020899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 204
Target Start/End: Complemental strand, 38628307 - 38628261
Alignment:
Q  158 aacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    |||| ||||||||| ||||||||||||||||||| ||||||||||||    
T  38628307 aacggttaagattttgtgtcaacgaatccgttgatacctggtgtcaa 38628261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 9197824 - 9197869
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||||||||||| ||||||||| ||||||||| |||||||    
T  9197824 gatttggtgtcaacgaattcgttgacacttggtgtcaacggatcct 9197869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 26652341 - 26652296
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||| ||||||| ||||||||||||||||||| |||||||    
T  26652341 gatttggtgttaacgaattcgttgacacctggtgtcaacggatcct 26652296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 39778966 - 39778921
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||| ||||||| ||||||||||||||||||| |||||||    
T  39778966 gatttggtgttaacgaattcgttgacacctggtgtcaatggatcct 39778921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 39779845 - 39779890
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||| ||||||| ||||||||||||||||||| |||||||    
T  39779845 gatttggtgttaacgaattcgttgacacctggtgtcaatggatcct 39779890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 11686967 - 11687014
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    |||||| |||||||||||| |||||||||| |||||||| ||||||||    
T  11686967 agatttagtgtcaacgaattcgttgacaccaggtgtcaacggatccta 11687014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 37025054 - 37025008
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    |||||||||||||||||||| ||||||| |||||||||| ||||||||    
T  37025054 agatttggtgtcaacgaatctgttgaca-ctggtgtcaacggatccta 37025008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 8996977 - 8997023
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||| |||| ||||||||||||| |||| |||||||    
T  8996977 agatttggtgtcaacaaatcagttgacacctggtatcaacggatcct 8997023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 17724813 - 17724763
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||||| ||||||||| ||||||||  |||||| ||||    
T  17724813 gatttggtgtcaacgaatctgttgacaccaggtgtcaactgatcctgtctc 17724763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 15198290 - 15198339
Alignment:
Q  163 ttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||| ||||||||||||| ||| |||||||||| |||||||| |||||||    
T  15198290 ttaaaatttggtgtcaacaaattcgttgacaccaggtgtcaaaggatcct 15198339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 27442145 - 27442190
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||| |||| || ||||||||||||||||||| |||||||    
T  27442145 gatttggtgttaacggattcgttgacacctggtgtcaacggatcct 27442190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 32979828 - 32979873
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||| ||| ||| ||||||||||||||||||| |||||||    
T  32979828 gatttggtgttaacaaattcgttgacacctggtgtcaacggatcct 32979873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 37064864 - 37064827
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  37064864 gatttggtgtcaatgaattcgttgacacctggtgtcaa 37064827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 45925 - 45969
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||| | ||||||||||||| ||| |||||||    
T  45925 atttggtgtcaacgaattcattgacacctggtgccaacggatcct 45969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 146; Significance: 7e-77; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 56 - 217
Target Start/End: Complemental strand, 46149788 - 46149627
Alignment:
Q  56 atttaggaaacaagaggatttttaggaaaggcgatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaa 155  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46149788 atttaggaaacaagaggatttttaggaaaggagatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaa 46149689  T
Q  156 cgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||    
T  46149688 cgaacgtttaagatttggtgtcaacgaatccattgacacctggtgtcaatggatcccatctc 46149627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 45080462 - 45080339
Alignment:
Q  56 atttaggaaacaagaggatttttaggaaaggcgatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaa 155  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45080462 atttaggaaacaagaggatttttaggaaaggagatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaa 45080363  T
Q  156 cgaacgtttaagatttggtgtcaa 179  Q
    ||||||||||||||||||||||||    
T  45080362 cgaacgtttaagatttggtgtcaa 45080339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 56 - 214
Target Start/End: Complemental strand, 17603327 - 17603169
Alignment:
Q  56 atttaggaaacaagaggatttttaggaaaggcgatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaa 155  Q
    |||||| |||||||||||||||||||||||| ||||||||||||| |||||    ||||||||||| |||||||||||||||||||||||||||||||||    
T  17603327 atttagaaaacaagaggatttttaggaaaggagatatgaaatattaaatgctcgtattaagattttgataaatgattattgacctttagattaaaagaaa 17603228  T
Q  156 cgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctat 214  Q
     |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17603227 tgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctat 17603169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 57 - 217
Target Start/End: Original strand, 17603856 - 17604016
Alignment:
Q  57 tttaggaaacaagaggatttttaggaaaggcgatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaac 156  Q
    ||||||||| |||||||||||||||||||| ||||||||||| | |||| | ||||||||||||| ||||||||||||||||||||||||||||  |||     
T  17603856 tttaggaaataagaggatttttaggaaaggagatatgaaatactaaatgtccacattaagattttgataaatgattattgacctttagattaaattaaat 17603955  T
Q  157 gaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  17603956 gaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcattggatcctatctc 17604016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 56 - 217
Target Start/End: Complemental strand, 11652452 - 11652291
Alignment:
Q  56 atttaggaaacaagaggatttttaggaaaggcgatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaa 155  Q
    ||||||||||||| ||||||||||||||||| ||||||||||| | |||| | ||||||||||||| || ||| ||||||||||||||||||||||||||    
T  11652452 atttaggaaacaaaaggatttttaggaaaggagatatgaaatacttaatgtccacattaagattttgatgaataattattgacctttagattaaaagaaa 11652353  T
Q  156 cgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
     ||||| ||| ||||||||||||||||||||||||||||||| ||| || ||||| ||||||    
T  11652352 tgaacgcttaggatttggtgtcaacgaatccgttgacacctgatgttaatggatcatatctc 11652291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 88 - 217
Target Start/End: Original strand, 21727455 - 21727584
Alignment:
Q  88 gatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccg 187  Q
    ||||| |||||||||||| | ||||||||||||| || ||| |||||||||| ||||||||| ||||| ||||| |||||||||||||||||||||||||    
T  21727455 gatataaaatattgaatgtccacattaagattttgatgaatcattattgaccattagattaagagaaatgaacgcttaagatttggtgtcaacgaatccg 21727554  T
Q  188 ttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||| ||||||| ||||    
T  21727555 ttgacacctggtgtcaacggatcctgtctc 21727584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 109 - 214
Target Start/End: Original strand, 11653976 - 11654081
Alignment:
Q  109 acattaagattttcataaatgattattgacctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaaggga 208  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| | |||||||||| |||    
T  11653976 acattaagattttgataaataattattgacctttagattaaaagaaatgaacatttaagatttggtgtcaacgaatccgttgagatctggtgtcaatgga 11654075  T
Q  209 tcctat 214  Q
    ||||||    
T  11654076 tcctat 11654081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 48648280 - 48648206
Alignment:
Q  138 cctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||| ||||||||  |||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  48648280 cctttagataaaaagaaatcaacggttaagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 48648206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 265074 - 265146
Alignment:
Q  138 cctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatc 210  Q
    |||||||||||| || |  ||||| || ||||||||||||||||||||||||||||||||||||||| |||||    
T  265074 cctttagattaagagtagtgaacgcttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatc 265146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 270 - 338
Target Start/End: Complemental strand, 2780314 - 2780247
Alignment:
Q  270 gtgagaataaattacagccatcggattaaaaatgaatgactaagattaaaagataggttaagtgagttg 338  Q
    |||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||| || |||||||||    
T  2780314 gtgagaataaattacagccatcagattaaaaaggaatggctaagattaaaagatagatt-agtgagttg 2780247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 48649148 - 48649223
Alignment:
Q  137 acctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||| ||| ||| ||||  |||| ||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  48649148 acctttggatcaaatgaaatcaacggttaagatttggtgtcaacgaatctgttgacacctggtgtcaatggatcct 48649223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 139 - 210
Target Start/End: Original strand, 51827471 - 51827542
Alignment:
Q  139 ctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatc 210  Q
    |||||||| ||||||||  |||| ||||||||||||| ||||||||||||||||||| |||||||| |||||    
T  51827471 ctttagataaaaagaaatcaacggttaagatttggtgacaacgaatccgttgacaccaggtgtcaacggatc 51827542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 31974700 - 31974650
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatct 216  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  31974700 agatttggtgtcaacgaatccgttgacacttggtgtcaacggatcctatct 31974650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 48765066 - 48765120
Alignment:
Q  158 aacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  48765066 aacggttaagatttggtgtcaacgaatccattgacacctggtgtcaatggatcct 48765120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 44699789 - 44699861
Alignment:
Q  130 attattgacctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtca 203  Q
    ||||| |||||||||||||||| |||  || | |||| ||||||||||||||||||||||||||||||||||||    
T  44699789 attatggacctttagattaaaa-aaataaatggttaatatttggtgtcaacgaatccgttgacacctggtgtca 44699861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 981744 - 981673
Alignment:
Q  138 cctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggat 209  Q
    ||||| ||||||| |||| | ||| || ||||||||||||||||||| ||||||||||||||||||| ||||    
T  981744 ccttttgattaaatgaaatgtacggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggat 981673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 14871202 - 14871156
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||    
T  14871202 agatttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 14871156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 37988222 - 37988268
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||    
T  37988222 agatttggtgtcaacgaattcgttgacacctggtgtcaatggatcct 37988268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 46150733 - 46150779
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  46150733 agatttggtgtcaacgaatccgttgacacctagtgtcaacggatcct 46150779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 48413367 - 48413330
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    ||||||||||||||||||||||||||||||||||||||    
T  48413367 gatttggtgtcaacgaatccgttgacacctggtgtcaa 48413330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 51469281 - 51469330
Alignment:
Q  164 taagatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||||||||||||||||||| || |||||| ||||||||    
T  51469281 taagatttggtgtcaacgaatccgttgacacttgatgtcaacggatccta 51469330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 168 - 204
Target Start/End: Complemental strand, 17605753 - 17605717
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    |||||||||||||||||||||||||||||||||||||    
T  17605753 atttggtgtcaacgaatccgttgacacctggtgtcaa 17605717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 168 - 204
Target Start/End: Original strand, 55373712 - 55373748
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    |||||||||||||||||||||||||||||||||||||    
T  55373712 atttggtgtcaacgaatccgttgacacctggtgtcaa 55373748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 264515 - 264468
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||||||    
T  264515 agatttggtgtcaacaaatccattgacacctggtgtcaatggatccta 264468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 6974744 - 6974791
Alignment:
Q  163 ttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatc 210  Q
    |||||||||||||||||||||||||||||||| ||||| ||| |||||    
T  6974744 ttaagatttggtgtcaacgaatccgttgacacatggtggcaatggatc 6974791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 204
Target Start/End: Original strand, 13477773 - 13477820
Alignment:
Q  157 gaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    ||||| || ||||||||||||||||||| |||||||||||||||||||    
T  13477773 gaacggttgagatttggtgtcaacgaattcgttgacacctggtgtcaa 13477820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 41458095 - 41458044
Alignment:
Q  153 aaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    |||| |||| || |||||||||||||||||||||||||||||||||| ||||    
T  41458095 aaaccaacggttgagatttggtgtcaacgaatccgttgacacctggtatcaa 41458044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 48507036 - 48507087
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||||| ||||    
T  48507036 agatttggtgtcaacgaattcattgacacctggtgtcaacggatcctgtctc 48507087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 20213028 - 20212986
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggat 209  Q
    |||||||||||||||||| ||||||||||||||||||| ||||    
T  20213028 gatttggtgtcaacgaattcgttgacacctggtgtcaacggat 20212986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 204
Target Start/End: Original strand, 30222074 - 30222140
Alignment:
Q  138 cctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    |||| |||||||||||||  |||| |||| ||||||| ||||||||||  |||||||||||||||||    
T  30222074 ccttcagattaaaagaaatcaacgcttaaaatttggtatcaacgaatctattgacacctggtgtcaa 30222140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 37520565 - 37520611
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  37520565 agatttggtgtcaacgaattcgttgacacctggtatcaacggatcct 37520611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 37987280 - 37987238
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaagggatc 210  Q
    ||||||||||||||||||| ||||||||||||||||| |||||    
T  37987280 atttggtgtcaacgaatccattgacacctggtgtcaacggatc 37987238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 40872814 - 40872856
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaagggatc 210  Q
    |||||||||||| |||||||||||||||||||||||| |||||    
T  40872814 atttggtgtcaatgaatccgttgacacctggtgtcaacggatc 40872856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 45081407 - 45081453
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||||||||||||||||||||||  |||||||| |||||||    
T  45081407 agatttggtgtcaacgaatccgttgacactaggtgtcaacggatcct 45081453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 48764526 - 48764480
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||| |||||||||||| |||||| |||||||    
T  48764526 agatttggtgtcaacgaattcgttgacacctgatgtcaatggatcct 48764480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 204
Target Start/End: Complemental strand, 51826594 - 51826548
Alignment:
Q  158 aacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    |||| |||||||||||||| |||||||||||||||| ||||||||||    
T  51826594 aacggttaagatttggtgttaacgaatccgttgacatctggtgtcaa 51826548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 54458670 - 54458716
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    |||||||||||||| |||||||||||||| |||||||| ||||||||    
T  54458670 gatttggtgtcaaccaatccgttgacaccaggtgtcaacggatccta 54458716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 13477105 - 13477060
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||| |||| ||||||||||||||||||| |||||||    
T  13477105 gatttggtgtcaatgaattcgttgacacctggtgtcaacggatcct 13477060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 20213536 - 20213581
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||||||||||| ||| ||||||||||||||| |||||||    
T  20213536 gatttggtgtcaacgaattcgtcgacacctggtgtcaacggatcct 20213581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 27082824 - 27082779
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||||||||||| ||||||||||| ||||||| |||||||    
T  27082824 gatttggtgtcaacgaattcgttgacacctagtgtcaatggatcct 27082779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 31115603 - 31115648
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcc 211  Q
    |||||||||||||||||||| |||||||||| ||||||| ||||||    
T  31115603 agatttggtgtcaacgaatctgttgacacctagtgtcaacggatcc 31115648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 52282418 - 52282459
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaagggat 209  Q
    |||||||||||| |||||||||||||||||||||||| ||||    
T  52282418 atttggtgtcaatgaatccgttgacacctggtgtcaacggat 52282459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 277
Target Start/End: Original strand, 2779713 - 2779747
Alignment:
Q  243 catatcacatgagaatgactaatttatgtgagaat 277  Q
    |||||||||||||||||||||| ||||||||||||    
T  2779713 catatcacatgagaatgactaacttatgtgagaat 2779747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 210
Target Start/End: Original strand, 10847883 - 10847957
Alignment:
Q  136 gacctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatc 210  Q
    |||| |||||||||||||||  || |  || ||||||||||||| ||||| ||||||||||||||| || |||||    
T  10847883 gaccattagattaaaagaaataaatggctaggatttggtgtcaatgaatctgttgacacctggtgttaacggatc 10847957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 213
Target Start/End: Complemental strand, 13349467 - 13349417
Alignment:
Q  163 ttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||||||||||  ||||||||||||| ||||  |||||||    
T  13349467 ttaagatttggtgtcaacgaatttgttgacacctggtatcaaccgatccta 13349417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 29856101 - 29856063
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    |||||||||||||||||||||||||||||| | ||||||    
T  29856101 agatttggtgtcaacgaatccgttgacaccagctgtcaa 29856063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Original strand, 33277509 - 33277551
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggat 209  Q
    |||||||||| ||||||| ||||||||||||||||||| ||||    
T  33277509 gatttggtgttaacgaattcgttgacacctggtgtcaacggat 33277551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 52266457 - 52266503
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||| |||| ||||||||||| || |||||||    
T  52266457 agatttggtgtcaacgaattcgttaacacctggtgttaacggatcct 52266503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 2092905 - 2092942
Alignment:
Q  158 aacgtttaagatttggtgtcaacgaatccgttgacacc 195  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  2092905 aacgattaagatttgatgtcaacgaatccgttgacacc 2092942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 29856687 - 29856716
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacc 195  Q
    ||||||||||||||||||||||||||||||    
T  29856687 agatttggtgtcaacgaatccgttgacacc 29856716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 44699910 - 44699881
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacc 195  Q
    ||||||||||||||||||||||||||||||    
T  44699910 agatttggtgtcaacgaatccgttgacacc 44699881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 52605489 - 52605533
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||| ||| ||||| ||||||||||||||||||| |||||||    
T  52605489 atttggtatcatcgaattcgttgacacctggtgtcaacggatcct 52605533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 130; Significance: 3e-67; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 56 - 217
Target Start/End: Original strand, 36238623 - 36238784
Alignment:
Q  56 atttaggaaacaagaggatttttaggaaaggcgatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaa 155  Q
    |||||||||| |||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36238623 atttaggaaataagaggatttttaggaaaggagatatgaaatacttaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaa 36238722  T
Q  156 cgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||| |||||| |||||    
T  36238723 cgaacgtttaagatttggtgtcaatgaatccgttgatacctggtgtcaatggatcccatctc 36238784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 57 - 217
Target Start/End: Original strand, 29513041 - 29513201
Alignment:
Q  57 tttaggaaacaagaggatttttaggaaaggcgatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaac 156  Q
    |||||||| ||||||||| ||||||||||| ||||||||||| | |||||||||| ||||||||| || ||| |||||||||||||||||||  |||||     
T  29513041 tttaggaatcaagaggatctttaggaaaggagatatgaaatactaaatgcctacaataagattttgatgaataattattgacctttagattaggagaaat 29513140  T
Q  157 gaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  29513141 gaacgttcaagatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctatctc 29513201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 88 - 212
Target Start/End: Original strand, 15902807 - 15902931
Alignment:
Q  88 gatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccg 187  Q
    ||||| |||||||||||| | ||||||||||||| || ||| |||||||||| ||||||||| ||||| ||||| ||||||||| |||||||||||||||    
T  15902807 gatataaaatattgaatgtccacattaagattttgatgaatcattattgaccattagattaagagaaatgaacgcttaagattttgtgtcaacgaatccg 15902906  T
Q  188 ttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||| |||||||    
T  15902907 ttgacacctggtgtcaacggatcct 15902931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 75 - 216
Target Start/End: Complemental strand, 40252162 - 40252021
Alignment:
Q  75 ttttaggaaaggcgatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaacgaacgtttaagatttggt 174  Q
    |||||||||||| ||||||||||| | |||  | ||||||||||||| || ||| |||||||||||||| |||| | |||| ||||||||| ||||||||    
T  40252162 ttttaggaaaggagatatgaaatacttaatatccacattaagattttgatgaataattattgacctttaaattacatgaaatgaacgtttaggatttggt 40252063  T
Q  175 gtcaacgaatccgttgacacctggtgtcaagggatcctatct 216  Q
    ||||||||||||||||||||||||||| || ||||| |||||    
T  40252062 gtcaacgaatccgttgacacctggtgttaatggatcatatct 40252021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 99 - 205
Target Start/End: Original strand, 16692910 - 16693016
Alignment:
Q  99 ttgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctgg 198  Q
    ||||||| | ||||||| ||||| || ||| |||||||||| ||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  16692910 ttgaatgtccacattaatattttgatgaatcattattgaccattagattaagagaaatgaacgcttaagatttggtgtcaacgaatccgttgacacctgg 16693009  T
Q  199 tgtcaag 205  Q
    |||||||    
T  16693010 tgtcaag 16693016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 22301870 - 22301923
Alignment:
Q  163 ttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatct 216  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  22301870 ttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctatct 22301923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 11750315 - 11750259
Alignment:
Q  157 gaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  11750315 gaacggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatggatccta 11750259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 217
Target Start/End: Original strand, 26588991 - 26589071
Alignment:
Q  137 acctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    |||||||||| ||| ||||  |||| |||| |||||| |||||||||||||||||||| ||||||||| ||||||||||||    
T  26588991 acctttagatcaaatgaaatcaacggttaatatttggagtcaacgaatccgttgacacttggtgtcaacggatcctatctc 26589071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 1297126 - 1297173
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1297126 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatccta 1297173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 9275635 - 9275588
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9275635 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatccta 9275588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 29719495 - 29719444
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  29719495 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctc 29719444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 9540383 - 9540329
Alignment:
Q  163 ttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||    
T  9540383 ttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgtctc 9540329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 27177959 - 27177910
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  27177959 atttggtgtcaacgaattcgttgacacctggtgtcaacggatcctatctc 27177910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 1296428 - 1296382
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||    
T  1296428 agatttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 1296382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 9276333 - 9276379
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||    
T  9276333 agatttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 9276379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 12725619 - 12725665
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  12725619 gatttggtgtcaacaaatccgttgacacctggtgtcaacggatccta 12725665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 22560571 - 22560617
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||    
T  22560571 agatttggtgtcaacgaatccgttgacacctgatgtcaacggatcct 22560617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 26752723 - 26752777
Alignment:
Q  163 ttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    |||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||    
T  26752723 ttaagatttgatgtcaacgaattcgttgacacctggtgtcaacggatcccatctc 26752777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 27178649 - 27178699
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||||||||    
T  27178649 gatttggtgtcaaacaatccgttgacacctggtgtcaacggatcctatctc 27178699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 18820480 - 18820436
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcc 211  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||    
T  18820480 gatttggtgtcaacgaatccgttgacacctgatgtcaatggatcc 18820436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 36237678 - 36237634
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||||| |||||||||||||||||||||||| |||||||    
T  36237678 atttggtgtcaatgaatccgttgacacctggtgtcaacggatcct 36237634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 18174673 - 18174720
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||||||| |||||||||||| |||||| ||||||||    
T  18174673 agatttggtgtcaacgaattcgttgacacctgatgtcaacggatccta 18174720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 29559423 - 29559470
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||||    
T  29559423 agatttggtgtcaacgaattcgttgacacctggtgtcaacagatccta 29559470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 42182618 - 42182665
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||||||||| ||||||||||||||||| || |||||    
T  42182618 agatttggtgtcaacgaatcccttgacacctggtgtcaacgggtccta 42182665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 209
Target Start/End: Original strand, 6584231 - 6584273
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggat 209  Q
    |||||||||||||||||||||||||||| ||||||||| ||||    
T  6584231 gatttggtgtcaacgaatccgttgacacttggtgtcaatggat 6584273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 8542551 - 8542597
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||||||||||||||| ||||| | |||||||    
T  8542551 agatttggtgtcaacgaatccgttgacacctagtgtccatggatcct 8542597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 11007280 - 11007242
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  11007280 agatttagtgtcaacgaatccgttgacacctggtgtcaa 11007242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 11751073 - 11751119
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    |||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  11751073 gatttggtgttaacgaattcgttgacacctggtgtcaacggatccta 11751119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 15774251 - 15774201
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatct 216  Q
    ||||||||||||||| ||| |||||||||| |||||||| |||||||||||    
T  15774251 agatttggtgtcaacaaattcgttgacaccaggtgtcaacggatcctatct 15774201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 213
Target Start/End: Complemental strand, 18174147 - 18174101
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    |||||||||||||||||| |||| |||||||||||||| ||||||||    
T  18174147 gatttggtgtcaacgaattcgttaacacctggtgtcaacggatccta 18174101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 23857028 - 23857074
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    |||||||||||||| |||||||||||||| |||||||| ||||||||    
T  23857028 gatttggtgtcaaccaatccgttgacaccaggtgtcaacggatccta 23857074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 42459100 - 42459054
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||| |||||||||||| |||||||||||||||||| |||||||    
T  42459100 agatttgatgtcaacgaatctgttgacacctggtgtcaatggatcct 42459054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 18821235 - 18821280
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||||||  ||||||||||||||||||||||| |||||||    
T  18821235 gatttggtgtcaattaatccgttgacacctggtgtcaatggatcct 18821280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 34812860 - 34812905
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||| |||||||||||||||| |||||||||| |||||||    
T  34812860 gatttggtgttaacgaatccgttgacaactggtgtcaacggatcct 34812905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 8541818 - 8541754
Alignment:
Q  148 aaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||  |||| ||||||||| |||||||||||| |||||| ||||| |||||| |||||||    
T  8541818 aaaagaaatcaacgattaagattttgtgtcaacgaattcgttgagacctgatgtcaacggatcct 8541754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 209
Target Start/End: Complemental strand, 26588312 - 26588244
Alignment:
Q  141 ttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggat 209  Q
    |||||| ||| ||||  |||| |||| |||||||||||||||||||||| ||||||| |||||| ||||    
T  26588312 ttagatcaaacgaaatcaacggttaatatttggtgtcaacgaatccgttaacacctgatgtcaacggat 26588244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 171 - 214
Target Start/End: Original strand, 15290086 - 15290128
Alignment:
Q  171 tggtgtcaacgaatccgttgacacctggtgtcaagggatcctat 214  Q
    |||||||||||||||||||| ||||||||||||| |||||||||    
T  15290086 tggtgtcaacgaatccgttg-cacctggtgtcaacggatcctat 15290128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 24933885 - 24933834
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    |||||||||||||| |||| |||||||||| |||||||| ||||||| ||||    
T  24933885 agatttggtgtcaatgaattcgttgacaccaggtgtcaacggatcctgtctc 24933834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 38361116 - 38361065
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||||| |||||||||||| |||||| | ||||| ||||    
T  38361116 agatttggtgtcaacgaattcgttgacacctgatgtcaacgtatcctgtctc 38361065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 8669200 - 8669234
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgt 201  Q
    ||||||||||||||||||| |||||||||||||||    
T  8669200 gatttggtgtcaacgaatctgttgacacctggtgt 8669234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 20432373 - 20432415
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaagggatc 210  Q
    |||||||||||| ||||||||||| |||||||||||| |||||    
T  20432373 atttggtgtcaatgaatccgttgatacctggtgtcaacggatc 20432415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 23343828 - 23343790
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    ||||||| |||||||||||||||||||| ||||||||||    
T  23343828 agatttgatgtcaacgaatccgttgacatctggtgtcaa 23343790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 24121293 - 24121339
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||| |||| ||||| |||||||||||||||||| |||||||    
T  24121293 agatttggtctcaatgaatctgttgacacctggtgtcaatggatcct 24121339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 24754997 - 24755043
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||| ||||||||||  ||||||||||||||||| |||||||    
T  24754997 agatttggtttcaacgaatcaattgacacctggtgtcaacggatcct 24755043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 277
Target Start/End: Original strand, 30517124 - 30517158
Alignment:
Q  243 catatcacatgagaatgactaatttatgtgagaat 277  Q
    |||||||||||||||||| ||||||||||||||||    
T  30517124 catatcacatgagaatgagtaatttatgtgagaat 30517158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 22301242 - 22301197
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||| |||| || ||||||||||||||||||| |||||||    
T  22301242 gatttggtgttaacggattcgttgacacctggtgtcaacggatcct 22301197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 9541035 - 9541083
Alignment:
Q  164 taagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||||| |||||||| || ||| ||| |||||||    
T  9541035 taagatttggtgtcaacgaattcgttgacatctcgtgccaacggatcct 9541083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 23856684 - 23856640
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatc 210  Q
    ||||||||||||||  |||||||||||||| |||||||| |||||    
T  23856684 agatttggtgtcaatcaatccgttgacaccaggtgtcaacggatc 23856640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 29512420 - 29512376
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatc 210  Q
    ||||||||||||||| ||| |||||||||| |||||||| |||||    
T  29512420 agatttggtgtcaacaaattcgttgacaccaggtgtcaacggatc 29512376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 33512164 - 33512100
Alignment:
Q  148 aaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||  |||| |||| |||| |||||||||||| |||||||||  |||||||| |||||||    
T  33512164 aaaagaaatcaacgattaatatttagtgtcaacgaattcgttgacactaggtgtcaacggatcct 33512100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 126; Significance: 6e-65; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 56 - 209
Target Start/End: Complemental strand, 55976325 - 55976172
Alignment:
Q  56 atttaggaaacaagaggatttttaggaaaggcgatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaa 155  Q
    |||||| |||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  55976325 atttagaaaacaagaggatttttaggaaaggagatatgaaatattaaatgcccacattaagattttgataaatgattattgacctttagattaaaagaaa 55976226  T
Q  156 cgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggat 209  Q
     |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  55976225 tgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaacggat 55976172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 57 - 214
Target Start/End: Original strand, 55976850 - 55977007
Alignment:
Q  57 tttaggaaacaagaggatttttaggaaaggcgatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaac 156  Q
    ||||||||| |||||||||||||||||||| ||||||||||| |||||| | ||||||||||||| ||||||||||||||||||||||||||||  |||     
T  55976850 tttaggaaataagaggatttttaggaaaggagatatgaaatactgaatgtccacattaagattttgataaatgattattgacctttagattaaattaaat 55976949  T
Q  157 gaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctat 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  55976950 gaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcgatggatcctat 55977007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 57 - 217
Target Start/End: Complemental strand, 55000845 - 55000685
Alignment:
Q  57 tttaggaaacaagaggatttttaggaaaggcgatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaac 156  Q
    |||||||||||||| ||||||||||||||| ||||||||||| | | |||  ||||||||||||| || ||| ||||||||||||||||||||||||||     
T  55000845 tttaggaaacaagatgatttttaggaaaggagatatgaaatactaagtgctcacattaagattttgatcaataattattgacctttagattaaaagaaat 55000746  T
Q  157 gaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  55000745 gaacgtttaagatttggtgtcaacgaatccgttgacatctggtgtcaatggatcctatctc 55000685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 57 - 204
Target Start/End: Complemental strand, 37273308 - 37273161
Alignment:
Q  57 tttaggaaacaagaggatttttaggaaaggcgatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaac 156  Q
    |||||||||||||||||||||||||||||| ||||||||||| | |||||| || |||||||||| |||||||||||||||| |||||||||||| |||     
T  37273308 tttaggaaacaagaggatttttaggaaaggagatatgaaatactaaatgcccacgttaagattttgataaatgattattgacttttagattaaaaaaaat 37273209  T
Q  157 gaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    ||||||||||||||||||||||||| |||| |||||| ||||||||||    
T  37273208 gaacgtttaagatttggtgtcaacggatccattgacatctggtgtcaa 37273161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 58 - 217
Target Start/End: Complemental strand, 24551852 - 24551693
Alignment:
Q  58 ttaggaaacaagaggatttttaggaaaggcgatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaacg 157  Q
    |||| |||||||||||||||||||||||| ||||||||||| | |||  | |||||||||||||||| ||| ||||||||||||||||||||| |||| |    
T  24551852 ttagaaaacaagaggatttttaggaaaggagatatgaaatacttaatatccacattaagattttcatgaataattattgacctttagattaaatgaaatg 24551753  T
Q  158 aacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    |||||||| |||||| ||||||||||||||| ||||||||||||||| ||||||| ||||    
T  24551752 aacgtttaggatttgatgtcaacgaatccgtcgacacctggtgtcaatggatcctctctc 24551693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 45920461 - 45920323
Alignment:
Q  57 tttaggaaacaagaggatttttaggaaaggcgatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaac 156  Q
    |||||||||||||||||||||||||||||| ||||||||||| | | |||| ||||||||||||| || ||| ||||||||||||||||||||||||||     
T  45920461 tttaggaaacaagaggatttttaggaaaggagatatgaaatactaagtgcccacattaagattttgatcaataattattgacctttagattaaaagaaat 45920362  T
Q  157 gaacgtttaagatttggtgtcaacgaatccgttgacacc 195  Q
    ||||| |||||||||| |||||| |||||||||||||||    
T  45920361 gaacgcttaagatttgatgtcaatgaatccgttgacacc 45920323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 88 - 212
Target Start/End: Complemental strand, 19550413 - 19550289
Alignment:
Q  88 gatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccg 187  Q
    ||||| |||||||||||| | ||||||||||||| || ||| |||||||||| ||||||||| ||||| ||||| |||| ||||||||||||||||||||    
T  19550413 gatataaaatattgaatgtccacattaagattttgatgaatcattattgaccattagattaagagaaatgaacgcttaaaatttggtgtcaacgaatccg 19550314  T
Q  188 ttgacacctggtgtcaagggatcct 212  Q
    |||||||||||||||||||||||||    
T  19550313 ttgacacctggtgtcaagggatcct 19550289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 24551909 - 24551978
Alignment:
Q  148 aaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  24551909 aaaagaaatgaacgtttaagatttggtgtcaacaaatccgttgacacctggtgtcaatggatcctatctc 24551978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 88 - 181
Target Start/End: Complemental strand, 2181887 - 2181794
Alignment:
Q  88 gatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaacgaacgtttaagatttggtgtcaacg 181  Q
    ||||| |||||||||||| | ||||||| ||||| || ||| |||||||||| ||||||||| ||||| ||||| |||||||||||||||||||    
T  2181887 gatataaaatattgaatgtccacattaatattttgatgaatcattattgaccattagattaagagaaatgaacgcttaagatttggtgtcaacg 2181794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 213
Target Start/End: Complemental strand, 53772884 - 53772809
Alignment:
Q  138 cctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||| ||| ||||||||  |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  53772884 cctttggatcaaaagaaatcaacgattaatatttggtgtcaacgaatccgttgacacctggtgtcaacggatccta 53772809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 24158796 - 24158870
Alignment:
Q  138 cctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||| ||| ||||  |||| ||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  24158796 cctttagatcaaatgaaatcaacggttaagatttggtgtcaacgaatctgttgacacctggtgtcaatggatcct 24158870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 20774153 - 20774230
Alignment:
Q  135 tgacctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||| |||||| || |  ||||| || ||||||||||||||||||||||||||||||||||||||| |||||||    
T  20774153 tgacctttggattaagagtagtgaacggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatggatcct 20774230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 47688483 - 47688530
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  47688483 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatccta 47688530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 30573713 - 30573759
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  30573713 agatttggtgtcaacgaatccgttgacacctggtgtcaatggatcct 30573759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 168 - 213
Target Start/End: Complemental strand, 2444419 - 2444374
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||    
T  2444419 atttggtgtcaacgaatccgttgacacctggtgtcaacggatccta 2444374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 8248521 - 8248570
Alignment:
Q  163 ttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  8248521 ttaagatttggtgtcaacgaatccgttgacatctggtgtcaacggatcct 8248570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 8266186 - 8266235
Alignment:
Q  163 ttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  8266186 ttaagatttggtgtcaacgaatccgttgacatctggtgtcaacggatcct 8266235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 599305 - 599353
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctat 214  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||    
T  599305 agatttggtgtcaacgaatccgttgacaccaggtgtcaacggatcctat 599353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 55001436 - 55001488
Alignment:
Q  158 aacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatc 210  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||| |||||    
T  55001436 aacggttaagatttagtgtcaacgaatccgttgacacctggtgtcaacggatc 55001488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 26147036 - 26147083
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  26147036 agatttggtgtcaacgaattcgttgacacctggtgtcaacggatccta 26147083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 52871346 - 52871303
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatc 210  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  52871346 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatc 52871303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 53732484 - 53732433
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||| ||||    
T  53732484 agatttagtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctc 53732433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 53773590 - 53773637
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||    
T  53773590 agatttggtgtcaacgaatccgttgacacctgatgtcaacggatccta 53773637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 142525 - 142579
Alignment:
Q  163 ttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||| |||| |||||||||| |||||||| ||||||||||||    
T  142525 ttaagatttggtgtcaatgaattcgttgacacccggtgtcaacggatcctatctc 142579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 3654520 - 3654570
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||| ||||    
T  3654520 gatttggtgtcaacgaatccgttgacacctggcgtcaacggatcctctctc 3654570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 16903647 - 16903685
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16903647 agatttggtgtcaacgaatccgttgacacctggtgtcaa 16903685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 26159626 - 26159676
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    |||||||||||||||||||||||||||| || |||||| ||||||||||||    
T  26159626 gatttggtgtcaacgaatccgttgacacttgatgtcaacggatcctatctc 26159676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 42882686 - 42882732
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||    
T  42882686 gatttggtgtcaacgaatccgttgacatctggtgtcaacggatccta 42882732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 47785803 - 47785841
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    |||||||||||||||||||||||||||||||||||||||    
T  47785803 agatttggtgtcaacgaatccgttgacacctggtgtcaa 47785841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 212
Target Start/End: Complemental strand, 8247748 - 8247699
Alignment:
Q  163 ttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||| ||||||||||||||||||||||| |||||||| |||||||    
T  8247748 ttaagattttgtgtcaacgaatccgttgacaccaggtgtcaacggatcct 8247699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 19080432 - 19080383
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  19080432 atttggtgtcaacgaatccgttgacacctggtgtcaacagatcctgtctc 19080383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 31329722 - 31329767
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||    
T  31329722 gatttggtgttaacgaatccgttgacacctggtgtcaacggatcct 31329767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 53147919 - 53147874
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||    
T  53147919 gatttggtgtcaacgaatccgttgacatctggtgtcaatggatcct 53147874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 5046486 - 5046534
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctat 214  Q
    |||||||||||||||||||| ||||| |||||||||||| |||||||||    
T  5046486 agatttggtgtcaacgaatctgttgatacctggtgtcaacggatcctat 5046534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 8265413 - 8265365
Alignment:
Q  163 ttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcc 211  Q
    ||||||||| ||||||||||||||||||||||| |||||||| ||||||    
T  8265413 ttaagattttgtgtcaacgaatccgttgacaccaggtgtcaacggatcc 8265365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 168 - 204
Target Start/End: Original strand, 53733737 - 53733773
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    |||||||||||||||||||||||||||||||||||||    
T  53733737 atttggtgtcaacgaatccgttgacacctggtgtcaa 53733773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 2446165 - 2446212
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||| |||||||| |||||||||||||||||| ||||||||    
T  2446165 agatttggtgttaacgaatctgttgacacctggtgtcaacggatccta 2446212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 56262527 - 56262476
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||||| ||||    
T  56262527 agatttggtgtcaacgaattcattgacacctggtgtcaacggatcctgtctc 56262476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 171
Target Start/End: Complemental strand, 2771370 - 2771256
Alignment:
Q  57 tttaggaaacaagaggatttttaggaaaggcgatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaac 156  Q
    ||||||||||||||| | ||||||||| |   ||||||||||||||||||| ||  ||||||||| || ||| |||  ||||| ||  ||||| |||||     
T  2771370 tttaggaaacaagagaaattttaggaatgtaaatatgaaatattgaatgcccacgctaagattttaatgaataattgatgaccattgaattaagagaaat 2771271  T
Q  157 gaacgtttaagattt 171  Q
    ||| |||||||||||    
T  2771270 gaatgtttaagattt 2771256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 7841593 - 7841547
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||||||||||||||||| ||||||| |||||| |||||||    
T  7841593 agatttggtgtcaacgaatccgttaacacctgatgtcaacggatcct 7841547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 7842533 - 7842579
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||| |||||||||||| |||||| |||||||    
T  7842533 agatttggtgtcaacgaattcgttgacacctgatgtcaatggatcct 7842579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 24374838 - 24374792
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||| |||||||| |||||||||| |||||||    
T  24374838 agatttggtgtcaacgaattcgttgacagctggtgtcaacggatcct 24374792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 43146652 - 43146690
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  43146652 agatttggtgtcaaggaatccgttgacacctggtgtcaa 43146690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 213
Target Start/End: Complemental strand, 47687957 - 47687911
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    |||||||||||||||||| |||| |||||||||||||| ||||||||    
T  47687957 gatttggtgtcaacgaattcgttaacacctggtgtcaacggatccta 47687911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 53148615 - 53148661
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||||||||||||| ||||||||||| |||||| |||||||    
T  53148615 agatttggtgtcaacgaatctgttgacacctgatgtcaatggatcct 53148661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 9365821 - 9365858
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  9365821 gatttggtgtcaatgaatccgttgacacctggtgtcaa 9365858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 171 - 204
Target Start/End: Original strand, 16903677 - 16903710
Alignment:
Q  171 tggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    ||||||||||||||||||||||||||||||||||    
T  16903677 tggtgtcaacgaatccgttgacacctggtgtcaa 16903710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 44792641 - 44792686
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||| ||||||| ||||||||||||||||||| |||||||    
T  44792641 gatttggtgttaacgaattcgttgacacctggtgtcaatggatcct 44792686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 199
Target Start/End: Complemental strand, 32088867 - 32088835
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggt 199  Q
    |||||||||||||||||||||||||||||||||    
T  32088867 gatttggtgtcaacgaatccgttgacacctggt 32088835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 194
Target Start/End: Complemental strand, 43146728 - 43146692
Alignment:
Q  158 aacgtttaagatttggtgtcaacgaatccgttgacac 194  Q
    |||| ||||||||||||||||||||||||||||||||    
T  43146728 aacggttaagatttggtgtcaacgaatccgttgacac 43146692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 203
Target Start/End: Complemental strand, 44469540 - 44469504
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtca 203  Q
    |||||||||||||||||| ||||||||||||||||||    
T  44469540 gatttggtgtcaacgaattcgttgacacctggtgtca 44469504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 1866392 - 1866345
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||||||| | ||||||||| ||||||| ||||||||    
T  1866392 agatttggtgtcaacgaattcattgacacctagtgtcaacggatccta 1866345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 197
Target Start/End: Complemental strand, 5046033 - 5046002
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctg 197  Q
    ||||||||||||||||||||||||||||||||    
T  5046033 agatttggtgtcaacgaatccgttgacacctg 5046002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 201
Target Start/End: Complemental strand, 11938760 - 11938725
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgt 201  Q
    ||||||||||||||||||| ||||||||||||||||    
T  11938760 agatttggtgtcaacgaattcgttgacacctggtgt 11938725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 11939445 - 11939492
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    |||||| ||||||||||||||||||||||  |||||||| ||||||||    
T  11939445 agatttcgtgtcaacgaatccgttgacactaggtgtcaacggatccta 11939492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 12920278 - 12920329
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    |||||||||||||||||||| ||| | ||||||||||||  |||||||||||    
T  12920278 agatttggtgtcaacgaatctgttaatacctggtgtcaaccgatcctatctc 12920329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 138 - 185
Target Start/End: Complemental strand, 31328879 - 31328832
Alignment:
Q  138 cctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatc 185  Q
    |||| |||||||||||||  ||||||||| ||||||||||||||||||    
T  31328879 ccttcagattaaaagaaatcaacgtttaaaatttggtgtcaacgaatc 31328832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 40347603 - 40347552
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||| |||| || ||||||||||||||||||| ||||||| ||||    
T  40347603 agatttggtgtaaacggattcgttgacacctggtgtcaatggatcctgtctc 40347552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 40495141 - 40495098
Alignment:
Q  169 tttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||  |||||||||||||||||| |||||||    
T  40495141 tttggtgtcaacgaatttgttgacacctggtgtcaacggatcct 40495098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 168 - 211
Target Start/End: Complemental strand, 50184475 - 50184432
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaagggatcc 211  Q
    |||||||||||||||||||||||||||||| | |||| ||||||    
T  50184475 atttggtgtcaacgaatccgttgacacctgatatcaacggatcc 50184432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 9365218 - 9365172
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||| ||| |||||||||||||||| || |||||||    
T  9365218 agatttggtgtcaacaaattcgttgacacctggtgttaacggatcct 9365172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 12919633 - 12919591
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggat 209  Q
    |||||||||| |||||| |||||||||||||||||||| ||||    
T  12919633 gatttggtgttaacgaacccgttgacacctggtgtcaacggat 12919591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 277
Target Start/End: Original strand, 42559826 - 42559860
Alignment:
Q  243 catatcacatgagaatgactaatttatgtgagaat 277  Q
    |||||||||||||||||||||| ||||||||||||    
T  42559826 catatcacatgagaatgactaacttatgtgagaat 42559860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 42880956 - 42880906
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||||| |||| |||||||||||||  |||| ||||||    
T  42880956 gatttggtgtcaacgaatctgttgtcacctggtgtcaacagatcatatctc 42880906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 1465368 - 1465323
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||| |||||| ||||| |||||||||||||||||| |||||||    
T  1465368 gatttgatgtcaatgaatctgttgacacctggtgtcaacggatcct 1465323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 86
Target Start/End: Original strand, 20774074 - 20774103
Alignment:
Q  57 tttaggaaacaagaggatttttaggaaagg 86  Q
    ||||||||||||||||||||||||||||||    
T  20774074 tttaggaaacaagaggatttttaggaaagg 20774103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 44791772 - 44791727
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||| ||||||| ||||||||||||||| ||| |||||||    
T  44791772 gatttggtgttaacgaattcgttgacacctggtgccaatggatcct 44791727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 24157977 - 24157929
Alignment:
Q  138 cctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatcc 186  Q
    ||||||||| ||||||||  |||| ||||||||||||||||||| ||||    
T  24157977 cctttagataaaaagaaatcaacggttaagatttggtgtcaacggatcc 24157929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 194
Target Start/End: Complemental strand, 30573197 - 30573161
Alignment:
Q  158 aacgtttaagatttggtgtcaacgaatccgttgacac 194  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  30573197 aacggttaagatttggtgtcaatgaatccgttgacac 30573161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 121; Significance: 6e-62; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 57 - 217
Target Start/End: Original strand, 47719599 - 47719759
Alignment:
Q  57 tttaggaaacaagaggatttttaggaaaggcgatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaac 156  Q
    ||||||||| |||||||||||||||||||| ||||||||||| |||||| | ||||||||||||| ||||||||||||||||||||||||||||  |||     
T  47719599 tttaggaaataagaggatttttaggaaaggagatatgaaatactgaatgtccacattaagattttgataaatgattattgacctttagattaaattaaat 47719698  T
Q  157 gaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  47719699 gaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctatctc 47719759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 57 - 217
Target Start/End: Complemental strand, 14305247 - 14305087
Alignment:
Q  57 tttaggaaacaagaggatttttaggaaaggcgatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaac 156  Q
    ||||||||| |||| ||||||||||||||| |||||||||||||||||||  ||||||||||||| || ||| ||||| |||||||||||| | |||||     
T  14305247 tttaggaaagaagatgatttttaggaaaggagatatgaaatattgaatgcgcacattaagattttgatgaataattatggacctttagattcagagaaat 14305148  T
Q  157 gaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||    
T  14305147 gaacgtttaagatttggtgtcaatgaatccgttgacacctagtgtcaacggatcctatctc 14305087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 56 - 195
Target Start/End: Complemental strand, 47719063 - 47718924
Alignment:
Q  56 atttaggaaacaagaggatttttaggaaaggcgatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaa 155  Q
    |||||||||||| |||||||||||||||| | |||||| |||||| |||||| ||||||||||||| ||||||||||||||| |||||||||||||||||    
T  47719063 atttaggaaacaggaggatttttaggaaatgagatatggaatattaaatgcccacattaagattttgataaatgattattgatctttagattaaaagaaa 47718964  T
Q  156 cgaacgtttaagatttggtgtcaacgaatccgttgacacc 195  Q
     |||| ||||||||||||||||||||||||||||||||||    
T  47718963 tgaacatttaagatttggtgtcaacgaatccgttgacacc 47718924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 56 - 193
Target Start/End: Complemental strand, 23900473 - 23900336
Alignment:
Q  56 atttaggaaacaagaggatttttaggaaaggcgatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaa 155  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||| |||  | ||||||||||||| || ||| ||||||||||||||||||||| ||||    
T  23900473 atttaggaaacaagaggatttttagtaaaggagatatgaaatatttaatatccacattaagattttgatgaataattattgacctttagattaaatgaaa 23900374  T
Q  156 cgaacgtttaagatttggtgtcaacgaatccgttgaca 193  Q
     ||||||||| ||||||| |||||||||||||||||||    
T  23900373 tgaacgtttaggatttggagtcaacgaatccgttgaca 23900336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 88 - 217
Target Start/End: Original strand, 23901020 - 23901149
Alignment:
Q  88 gatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccg 187  Q
    ||||| |||||||||||| | |||||||||||||  ||||| |||||||||||||||||||||||||| |||| |||||||||| |||||||||||| ||    
T  23901020 gatataaaatattgaatgtccacattaagattttgctaaataattattgacctttagattaaaagaaatgaacatttaagatttagtgtcaacgaattcg 23901119  T
Q  188 ttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||| ||||||||||||    
T  23901120 ttgacacctggtgtcaatggatcctatctc 23901149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 88 - 217
Target Start/End: Original strand, 13785519 - 13785648
Alignment:
Q  88 gatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccg 187  Q
    ||||| ||||| |||||||| || |||| ||||| || ||| |||||||||||||||||||| |||||  |||| |||||||||||||||||||||||||    
T  13785519 gatataaaatactgaatgcccacgttaaaatttttatgaataattattgacctttagattaagagaaattaacgcttaagatttggtgtcaacgaatccg 13785618  T
Q  188 ttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||| ||||||| ||||    
T  13785619 ttgacacctggtgtcaacggatcctgtctc 13785648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 21493124 - 21493026
Alignment:
Q  88 gatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatcc 186  Q
    ||||| ||||| |||||||| ||||||| ||||| || ||| |||||||||||||||||||| |||||  |||| ||||||||||||||||||||||||    
T  21493124 gatataaaatactgaatgcccacattaaaattttgatgaataattattgacctttagattaagagaaattaacgcttaagatttggtgtcaacgaatcc 21493026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 1417659 - 1417605
Alignment:
Q  163 ttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  1417659 ttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctatctc 1417605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 38225976 - 38226030
Alignment:
Q  163 ttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  38225976 ttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctatctc 38226030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 25342545 - 25342498
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  25342545 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatccta 25342498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 25343351 - 25343304
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  25343351 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatccta 25343304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 30660641 - 30660594
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30660641 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatccta 30660594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 30661459 - 30661510
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  30661459 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctc 30661510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 37949653 - 37949602
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  37949653 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctc 37949602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 37950471 - 37950518
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  37950471 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatccta 37950518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 7668530 - 7668484
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  7668530 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 7668484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 25599070 - 25599024
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  25599070 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 25599024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 26636151 - 26636105
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  26636151 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 26636105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 31278159 - 31278209
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  31278159 gatttggtgtcaacgaatccgttgacatctggtgtcaacggatcctatctc 31278209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 46428235 - 46428189
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  46428235 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 46428189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 210
Target Start/End: Complemental strand, 48669902 - 48669804
Alignment:
Q  112 ttaagattttcataaatgattattgacctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatc 210  Q
    |||||||||| || ||| |||||  || |||||||||| | ||| |||||||||||||||||||  || |||| ||||||||||||||||||| |||||    
T  48669902 ttaagattttgatgaataattatcaacatttagattaagaaaaatgaacgtttaagatttggtggtaatgaattcgttgacacctggtgtcaatggatc 48669804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 43065119 - 43065164
Alignment:
Q  165 aagatttggtgtcaacgaatccgttgacacctggtgtcaagggatc 210  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  43065119 aagatttggtgtcaacgaatccgttgacacctggtgtcaacggatc 43065164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 45099894 - 45099943
Alignment:
Q  163 ttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  45099894 ttaaaatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 45099943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 338
Target Start/End: Original strand, 1468480 - 1468547
Alignment:
Q  270 gtgagaataaattacagccatcggattaaaaatgaatgactaagattaaaagataggttaagtgagttg 338  Q
    |||||||||||||||| ||||| ||||||||| ||||| ||||||||||||||||| || |||||||||    
T  1468480 gtgagaataaattacaaccatcagattaaaaaggaatggctaagattaaaagatagatt-agtgagttg 1468547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 24389620 - 24389668
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctat 214  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||    
T  24389620 agatttggtgtcaatgaatccgttgacacctggtgtcaacggatcctat 24389668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 214
Target Start/End: Original strand, 3029203 - 3029250
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctat 214  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||    
T  3029203 gatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctat 3029250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 3772530 - 3772577
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  3772530 agatttggtgtcaacgaatacgttgacacctggtgtcaacggatccta 3772577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 14686179 - 14686128
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||||||||||||    
T  14686179 agatttggtgtcaacaaatccgttgacacttggtgtcaacggatcctatctc 14686128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 27948494 - 27948447
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  27948494 agatttggtgtcaacgaattcgttgacacctggtgtcaacggatccta 27948447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 45162017 - 45161970
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||    
T  45162017 agatttggtgtcaacgaatccgttaacacctggtgtcaatggatccta 45161970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 18977773 - 18977819
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||    
T  18977773 agatttggtgttaacgaatccgttgacacctggtgtcaatggatcct 18977819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 19067685 - 19067639
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||    
T  19067685 agatttggtgtcaacgaatccgttgacacgtggtgtcaacggatcct 19067639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 26636864 - 26636910
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  26636864 agatttggtgtcaacgaatccgttgacaccttgtgtcaacggatcct 26636910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 3688434 - 3688381
Alignment:
Q  164 taagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    |||||||||||||||||||||||||||| | |||||||||| ||||||| ||||    
T  3688434 taagatttggtgtcaacgaatccgttgatatctggtgtcaacggatcctgtctc 3688381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 19068401 - 19068450
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||| ||||    
T  19068401 atttggtgtcaacgaatacgttgacacctggtgtcaacggatcctgtctc 19068450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 24453728 - 24453781
Alignment:
Q  164 taagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||| ||||||||||||||||||||||| | |||| |||||    
T  24453728 taagatttggtgtcaacaaatccgttgacacctggtgtcaacgaatcccatctc 24453781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 213
Target Start/End: Complemental strand, 24719381 - 24719336
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||    
T  24719381 atttggtgtcaacgaatccgttgacatctggtgtcaacggatccta 24719336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 31954269 - 31954326
Alignment:
Q  138 cctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacc 195  Q
    |||||| || ||||||||  |||| |||||||||||||||||||||||||||||||||    
T  31954269 cctttaaataaaaagaaatcaacggttaagatttggtgtcaacgaatccgttgacacc 31954326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 213
Target Start/End: Original strand, 37395505 - 37395550
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||    
T  37395505 atttggtgttaacgaatccgttgacacctggtgtcaacggatccta 37395550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 3903345 - 3903389
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||||||| |||||||||||||||||||||| |||||||    
T  3903345 atttggtgtcaacggatccgttgacacctggtgtcaacggatcct 3903389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 40273617 - 40273561
Alignment:
Q  157 gaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||| || ||||||||||||||||||| | ||||||||||||||||| ||||||||    
T  40273617 gaacggttgagatttggtgtcaacgaattcattgacacctggtgtcaacggatccta 40273561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 16664129 - 16664176
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    |||||| ||||||||| |||||||||||||||||||||| ||||||||    
T  16664129 agatttagtgtcaacggatccgttgacacctggtgtcaacggatccta 16664176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 17638489 - 17638536
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    |||||| ||||||||| |||||||||||||||||||||| ||||||||    
T  17638489 agatttagtgtcaacggatccgttgacacctggtgtcaacggatccta 17638536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 21496958 - 21497033
Alignment:
Q  137 acctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||| ||||||| || |  |||| || ||||||||||||||||||| |||||||||||| |||||| |||||||    
T  21496958 accttttgattaaatgagataaacggttgagatttggtgtcaacgaattcgttgacacctgttgtcaacggatcct 21497033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 25343243 - 25343289
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||| | ||||||||||||||||| |||||||    
T  25343243 agatttggtgtcaacgaattcattgacacctggtgtcaacggatcct 25343289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 46428821 - 46428867
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  46428821 agatttgatgtcaacgaattcgttgacacctggtgtcaacggatcct 46428867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 37706474 - 37706430
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||| |||||||||||||| |||||||||||| |||||||    
T  37706474 atttggtgttaacgaatccgttgatacctggtgtcaatggatcct 37706430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 201
Target Start/End: Complemental strand, 3028022 - 3027987
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgt 201  Q
    ||||||||||||||||||| ||||||||||||||||    
T  3028022 agatttggtgtcaacgaattcgttgacacctggtgt 3027987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 277
Target Start/End: Complemental strand, 1469085 - 1469051
Alignment:
Q  243 catatcacatgagaatgactaatttatgtgagaat 277  Q
    |||||||||||||||||||||| ||||||||||||    
T  1469085 catatcacatgagaatgactaacttatgtgagaat 1469051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 3689276 - 3689326
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||||| ||||||| | |||||||| ||||||| ||||    
T  3689276 gatttggtgtcaacgaatctgttgacatcaggtgtcaacggatcctgtctc 3689326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 25599823 - 25599869
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||||||| |||||  ||||||||||||||||| |||||||    
T  25599823 agatttggtgtcaatgaatctattgacacctggtgtcaacggatcct 25599869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 48718196 - 48718242
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||| |||| |||||||||| |||||| ||||||||    
T  48718196 gatttggtgtcaacggatccattgacacctgctgtcaatggatccta 48718242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 15305245 - 15305290
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||||||||||| | |||||||||| |||||| |||||||    
T  15305245 gatttggtgtcaacgaattcattgacacctgatgtcaatggatcct 15305290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 194
Target Start/End: Complemental strand, 24581100 - 24581063
Alignment:
Q  157 gaacgtttaagatttggtgtcaacgaatccgttgacac 194  Q
    ||||| || |||||||||||||||||||||||||||||    
T  24581100 gaacgcttgagatttggtgtcaacgaatccgttgacac 24581063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 201
Target Start/End: Complemental strand, 31277469 - 31277436
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgt 201  Q
    ||||||||||||||||| ||||||||||||||||    
T  31277469 atttggtgtcaacgaattcgttgacacctggtgt 31277436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 45099185 - 45099140
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||| ||||||| |||||||||||| |||||| |||||||    
T  45099185 gatttggtgttaacgaattcgttgacacctgatgtcaacggatcct 45099140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 45162764 - 45162793
Alignment:
Q  164 taagatttggtgtcaacgaatccgttgaca 193  Q
    ||||||||||||||||||||||||||||||    
T  45162764 taagatttggtgtcaacgaatccgttgaca 45162793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 116
Target Start/End: Complemental strand, 48670204 - 48670155
Alignment:
Q  67 aagaggatttttaggaaaggcgatatgaaatattgaatgcctacattaag 116  Q
    |||| ||||||||| ||||| |||||||||||||||||| | ||||||||    
T  48670204 aagatgatttttagaaaaggagatatgaaatattgaatgtccacattaag 48670155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 204
Target Start/End: Complemental strand, 36378858 - 36378822
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  36378858 atttggtgtcaacgaatccgtcgacaccaggtgtcaa 36378822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 42421054 - 42421102
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctat 214  Q
    ||||||||||||||| |||| ||||||| ||||||||||  ||||||||    
T  42421054 agatttggtgtcaacaaatcggttgacatctggtgtcaacagatcctat 42421102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 117; Significance: 2e-59; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 56 - 204
Target Start/End: Original strand, 1283393 - 1283541
Alignment:
Q  56 atttaggaaacaagaggatttttaggaaaggcgatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaa 155  Q
    |||||| |||||||||||||||||||||||| ||||||||||||| |||| | ||||||||||||| ||||||||||||||||||||||||||||| |||    
T  1283393 atttagaaaacaagaggatttttaggaaaggagatatgaaatattaaatgtccacattaagattttgataaatgattattgacctttagattaaaataaa 1283492  T
Q  156 cgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1283493 tgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaa 1283541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 1282086 - 1281948
Alignment:
Q  57 tttaggaaacaagaggatttttaggaaaggcgatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaac 156  Q
    ||||||||| |||||||||||||||||||| ||||||||||| |||||| | ||||||||||||| ||||||||||||||||||||||||||||  |||     
T  1282086 tttaggaaataagaggatttttaggaaaggagatatgaaatactgaatgtccacattaagattttgataaatgattattgacctttagattaaattaaat 1281987  T
Q  157 gaacgtttaagatttggtgtcaacgaatccgttgacacc 195  Q
     ||||||||||||||||||||||||||||||||||||||    
T  1281986 taacgtttaagatttggtgtcaacgaatccgttgacacc 1281948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 9407407 - 9407261
Alignment:
Q  57 tttaggaaacaagaggatttttaggaaaggcgatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaac 156  Q
    |||||||||||||||||||||||||||||| ||||||||||| | | || | ||||||||||||| || ||| ||||||||||||||||||||||||||     
T  9407407 tttaggaaacaagaggatttttaggaaaggagatatgaaatactaagtgtccacattaagatttttatcaataattattgacctttagattaaaagaaat 9407308  T
Q  157 gaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtca 203  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||    
T  9407307 gaacgcttaagatttggtgtcaacgaatccgttgacacttggtgtca 9407261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 109 - 217
Target Start/End: Complemental strand, 1281941 - 1281833
Alignment:
Q  109 acattaagattttcataaatgattattgacctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaaggga 208  Q
    ||||||||||||| ||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  1281941 acattaagattttgataaatgattattgacctttagattaaattaaatgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaatgga 1281842  T
Q  209 tcctatctc 217  Q
    |||||||||    
T  1281841 tcctatctc 1281833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 57 - 214
Target Start/End: Complemental strand, 2314098 - 2313947
Alignment:
Q  57 tttaggaaacaagaggatttttaggaaaggcgatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaac 156  Q
    ||||||||| |||| |||||||| ||||||      |||||||| |||||| ||||||||||||| || ||| |||||||||||||||||||| |||||     
T  2314098 tttaggaaagaagatgatttttacgaaagg------gaaatattaaatgcccacattaagattttgatgaataattattgacctttagattaagagaaat 2314005  T
Q  157 gaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctat 214  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||    
T  2314004 gaacgtttaagatttggtgtcaatgaatctgttgacacctggtgtcaatggatcctat 2313947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 57 - 179
Target Start/End: Original strand, 19129450 - 19129571
Alignment:
Q  57 tttaggaaacaagaggatttttaggaaaggcgatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaac 156  Q
    |||||||||||| ||||||||||||||||| ||||||||||| | | |||| ||||||||||||| || ||| ||||||||||||||||||||||||||     
T  19129450 tttaggaaacaa-aggatttttaggaaaggagatatgaaatactaagtgcccacattaagattttgatcaataattattgacctttagattaaaagaaat 19129548  T
Q  157 gaacgtttaagatttggtgtcaa 179  Q
    ||||  |||||||||||||||||    
T  19129549 gaacacttaagatttggtgtcaa 19129571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 57 - 186
Target Start/End: Original strand, 16538881 - 16539009
Alignment:
Q  57 tttaggaaacaagaggatttttaggaaaggcgatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaac 156  Q
    |||||||||| ||||||||||||  ||||| ||||||||||| | |||||| || |||||||||| || ||| |||||||||| | |||||||||||||     
T  16538881 tttaggaaacgagaggatttttaataaaggagatatgaaatactaaatgcccacgttaagattttgatgaataattattgaccct-agattaaaagaaat 16538979  T
Q  157 gaacgtttaagatttggtgtcaacgaatcc 186  Q
    ||||||||||||||||||||||||||||||    
T  16538980 gaacgtttaagatttggtgtcaacgaatcc 16539009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 7632145 - 7632092
Alignment:
Q  164 taagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7632145 taagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctatctc 7632092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 19359781 - 19359706
Alignment:
Q  137 acctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||| ||| ||||  |||| |||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  19359781 acctttagatcaaacgaaatcaacggttaatatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 19359706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 1554083 - 1554137
Alignment:
Q  163 ttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  1554083 ttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctatctc 1554137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 19128826 - 19128772
Alignment:
Q  158 aacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19128826 aacggttaagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 19128772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 141 - 212
Target Start/End: Complemental strand, 234774 - 234703
Alignment:
Q  141 ttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||| ||| ||||  |||| |||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  234774 ttagataaaacgaaatcaacggttaatatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 234703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 235640 - 235593
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  235640 agatttggtgtcaacgaatccgttgacacctggtgtcaatggatccta 235593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 237799 - 237870
Alignment:
Q  141 ttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||| ||| ||||  |||| |||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  237799 ttagatgaaacgaaatcaacggttaatatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 237870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 6476794 - 6476845
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  6476794 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctc 6476845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 29046077 - 29046031
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  29046077 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 29046031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 236932 - 236979
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||    
T  236932 agatttggtgtctacgaatccgttgacacctggtgtcaatggatccta 236979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 19360454 - 19360525
Alignment:
Q  141 ttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||| ||| ||||  |||| |||| ||||||||||||||||| ||||||||||||||||||| |||||||    
T  19360454 ttagatcaaacgaaatcaacggttaatatttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 19360525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 27364490 - 27364541
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||| ||||    
T  27364490 agatttggtgtcaacgaatccattgacacctggtgtcaacggatcctgtctc 27364541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 1283533 - 1283579
Alignment:
Q  171 tggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||    
T  1283533 tggtgtcaacgaatccgttgacacctggtgtcaacggatcctctctc 1283579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 10554565 - 10554519
Alignment:
Q  171 tggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||    
T  10554565 tggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctc 10554519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 10554595 - 10554557
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10554595 agatttggtgtcaacgaatccgttgacacctggtgtcaa 10554557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 139 - 209
Target Start/End: Original strand, 22799736 - 22799806
Alignment:
Q  139 ctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggat 209  Q
    |||||||| ||||||||  |||  |||||||||||||||||||||| | ||||||||||||||||| ||||    
T  22799736 ctttagatcaaaagaaatcaacagttaagatttggtgtcaacgaattcattgacacctggtgtcaacggat 22799806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 28705882 - 28705928
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||    
T  28705882 agatttagtgtcaacgaatccgttgacacctggtgtcaacggatcct 28705928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 29087973 - 29087927
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||    
T  29087973 agatttggtgtcaatgaatccgttgacacctggtgtcaacggatcct 29087927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 34600835 - 34600881
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||    
T  34600835 gatttggtgtcaacgaattcgttaacacctggtgtcaagggatccta 34600881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 212
Target Start/End: Complemental strand, 14478972 - 14478923
Alignment:
Q  163 ttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||| |||||||||||||||||||||||||||||| |||||| |||||||    
T  14478972 ttaaaatttggtgtcaacgaatccgttgacacctgatgtcaacggatcct 14478923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 38056840 - 38056791
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||| |||||||||||||||||||||||  |||||||||||    
T  38056840 atttggtgtcaaccaatccgttgacacctggtgtcaacagatcctatctc 38056791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 22798957 - 22798905
Alignment:
Q  158 aacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatc 210  Q
    |||| ||||||||||||||||||||||||||||||||||| | |||| |||||    
T  22798957 aacgattaagatttggtgtcaacgaatccgttgacacctgatatcaacggatc 22798905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 25858257 - 25858213
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcc 211  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||    
T  25858257 gatttggtgtcaacgaatccgttgacacctagtgtcaacggatcc 25858213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 17071272 - 17071225
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||||||| |||||||||||| |||||| ||||||||    
T  17071272 agatttggtgtcaacgaattcgttgacacctgatgtcaacggatccta 17071225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 20854908 - 20854959
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||||||| || |||||||||||||| ||||| ||||||    
T  20854908 agatttggtgtcaacgaatccattaacacctggtgtcaacggatcatatctc 20854959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 28705213 - 28705170
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggat 209  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||    
T  28705213 agatttggtgtaaacgaatccgttgacacctggtgtcaacggat 28705170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 34600309 - 34600262
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||||||| |||||||||||| |||||| ||||||||    
T  34600309 agatttggtgtcaacgaattcgttgacacctgatgtcaacggatccta 34600262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 4084928 - 4084882
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||| |||||||||| |||||||| |||||||    
T  4084928 agatttggtgtcaacgaattcgttgacaccaggtgtcaacggatcct 4084882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 17071798 - 17071844
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    |||||||||||||||||| |||| |||||||||||||| ||||||||    
T  17071798 gatttggtgtcaacgaattcgttaacacctggtgtcaacggatccta 17071844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 34709040 - 34709078
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  34709040 agatttggtgccaacgaatccgttgacacctggtgtcaa 34709078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 38057599 - 38057645
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    |||||||||||||| ||||||||||||||| ||||||| ||||||||    
T  38057599 gatttggtgtcaaccaatccgttgacacctagtgtcaacggatccta 38057645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 201
Target Start/End: Original strand, 27363779 - 27363812
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgt 201  Q
    ||||||||||||||||||||||||||||||||||    
T  27363779 atttggtgtcaacgaatccgttgacacctggtgt 27363812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 36038743 - 36038698
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcc 211  Q
    ||||||||||| |||||||||||||| |||||||||||| ||||||    
T  36038743 agatttggtgttaacgaatccgttgatacctggtgtcaacggatcc 36038698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 41045460 - 41045403
Alignment:
Q  138 cctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacc 195  Q
    ||||||||| ||||||||  |||  ||||||||||||||||||||| |||||||||||    
T  41045460 cctttagatcaaaagaaatcaacagttaagatttggtgtcaacgaaaccgttgacacc 41045403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 213
Target Start/End: Complemental strand, 43510278 - 43510233
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||| |||||||| |||||||||||||||||| ||||||||    
T  43510278 atttggtgttaacgaatctgttgacacctggtgtcaacggatccta 43510233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 138 - 213
Target Start/End: Original strand, 19366541 - 19366616
Alignment:
Q  138 cctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||| ||||||||  | |  |||||||||  ||||||||||| | ||||||||||||||||| ||||||||    
T  19366541 cctttagatcaaaagaaatcagcagttaagatttaatgtcaacgaattcattgacacctggtgtcaacggatccta 19366616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 22212982 - 22213029
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    |||||||||||||| |||||||||||||||||| |||||  |||||||    
T  22212982 agatttggtgtcaatgaatccgttgacacctggcgtcaactgatccta 22213029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 277
Target Start/End: Original strand, 11571269 - 11571303
Alignment:
Q  243 catatcacatgagaatgactaatttatgtgagaat 277  Q
    |||||||||||||||||||||| ||||||||||||    
T  11571269 catatcacatgagaatgactaacttatgtgagaat 11571303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 213
Target Start/End: Complemental strand, 26880772 - 26880722
Alignment:
Q  163 ttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    |||||||||||||| |||||||  |||||||| ||||||||| ||||||||    
T  26880772 ttaagatttggtgtaaacgaattggttgacacatggtgtcaaaggatccta 26880722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 33006299 - 33006349
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    |||||||||||||||||||| ||||||| || ||||||  |||||||||||    
T  33006299 gatttggtgtcaacgaatccattgacacttgatgtcaacagatcctatctc 33006349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 33005577 - 33005525
Alignment:
Q  158 aacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatc 210  Q
    |||| ||||||||| |||||||||||| | ||||||| ||||||||| |||||    
T  33005577 aacggttaagattttgtgtcaacgaattcattgacacttggtgtcaacggatc 33005525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 33471083 - 33471139
Alignment:
Q  157 gaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||| || ||||||| ||||||||||| ||||||||| |||||||||  |||||||    
T  33471083 gaacggttgagatttgttgtcaacgaattcgttgacacgtggtgtcaacagatccta 33471139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 6e-53; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 56 - 217
Target Start/End: Complemental strand, 24992128 - 24991967
Alignment:
Q  56 atttaggaaacaagaggatttttaggaaaggcgatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaa 155  Q
    ||||||||||||| |||||||||| |||||| ||||||||||| | |||| | ||||||||||||| || ||| ||||||||||||||||||||| ||||    
T  24992128 atttaggaaacaaaaggatttttatgaaaggagatatgaaatacttaatgtccacattaagattttgatgaataattattgacctttagattaaatgaaa 24992029  T
Q  156 cgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
     ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24992028 tgaacgtttatgatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctatctc 24991967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 47968019 - 47967864
Alignment:
Q  57 tttaggaaacaagaggatttttaggaaaggcgatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaac 156  Q
    |||||||||||||| ||||||||||||||| ||||||||||||| |||||| ||| ||||||||| || ||| |||||||||||||||||||| |||||     
T  47968019 tttaggaaacaagaagatttttaggaaaggagatatgaaatattaaatgcccacaataagattttgatgaataattattgacctttagattaagagaaat 47967920  T
Q  157 gaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||| | |||||||||||||||||||||||||||||||||||||||| |||||||    
T  47967919 gaacgctcaagatttggtgtcaacgaatccgttgacacctggtgtcaatggatcct 47967864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 88 - 217
Target Start/End: Original strand, 24992670 - 24992799
Alignment:
Q  88 gatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccg 187  Q
    ||||| |||||||||||| | |||||||||||||  ||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  24992670 gatataaaatattgaatggccacattaagattttgctaaataattattgacctttagattaaaagaaatgaacgtttaagatttgatgtcaacgaatccg 24992769  T
Q  188 ttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||  ||||||||||||    
T  24992770 ttgacacctggtgtcagtggatcctatctc 24992799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 57 - 216
Target Start/End: Original strand, 37577541 - 37577699
Alignment:
Q  57 tttaggaaacaagaggatttttaggaaaggcgatatgaaatattgaatgcctacattaagattttcataaatgattattgacctttagattaaaagaaac 156  Q
    |||||||||||||||||| ||||||||||| ||||||||||| | ||||   ||||||||||||| || ||||||||||||| ||||||| ||||||||     
T  37577541 tttaggaaacaagaggatctttaggaaaggagatatgaaatactaaatgttcacattaagattttgatgaatgattattgac-tttagataaaaagaaat 37577639  T
Q  157 gaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatct 216  Q
     ||||| ||| |||||||||||||||||||||||||||||||| |||| |||||||||||    
T  37577640 caacgtctaaaatttggtgtcaacgaatccgttgacacctggtatcaatggatcctatct 37577699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 4433851 - 4433901
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatct 216  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4433851 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctatct 4433901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 25469082 - 25469136
Alignment:
Q  158 aacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25469082 aacggttaagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 25469136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 34309234 - 34309285
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  34309234 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctc 34309285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 49680859 - 49680812
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  49680859 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatccta 49680812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 4439210 - 4439260
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatct 216  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  4439210 agatttggtgtcaacgaatccgttgacaccaggtgtcaacggatcctatct 4439260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 17172667 - 17172717
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  17172667 gatttggcgtcaacgaatccgttgacacctggtgtcaacggatcctatctc 17172717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 30663434 - 30663360
Alignment:
Q  138 cctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||||| || |  ||||| || |||||||||||||||||||||||||| |||||||||||| |||||||    
T  30663434 cctttagattaagagtagtgaacggttgagatttggtgtcaacgaatccgttgatacctggtgtcaacggatcct 30663360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 168 - 213
Target Start/End: Original strand, 13142673 - 13142718
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  13142673 atttagtgtcaacgaatccgttgacacctggtgtcaagggatccta 13142718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 17171977 - 17171928
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  17171977 atttggtgtcaacgaattcgttgacacctggtgtcaacggatcctatctc 17171928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 19172580 - 19172625
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  19172580 gatttggtgtcaacgaatccgttgacacctggtgtcaatggatcct 19172625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 7558497 - 7558446
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||||||||||||    
T  7558497 agatttggtgtcaacaaatccgttgacacttggtgtcaacggatcctatctc 7558446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 7559203 - 7559254
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||| ||||    
T  7559203 agatttggtgtcaacggatccgttgacacctggtgtcaacggatcctgtctc 7559254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 10121556 - 10121603
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  10121556 agatttggtgtcaaccaatccgttgacacctggtgtcaacggatccta 10121603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 11704812 - 11704859
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  11704812 agatttggtgtcaacgaatccgttgacacttggtgtcaatggatccta 11704859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 13262881 - 13262834
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  13262881 agatttggtgtcaacgaattcgttgacacctggtgtcaacggatccta 13262834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 30663971 - 30664026
Alignment:
Q  157 gaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||| |||||||    
T  30663971 gaacggttgagatttggtgtcaacgaatccgttgacaccaggtgtcaacggatcct 30664026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 30931939 - 30931896
Alignment:
Q  163 ttaagatttggtgtcaacgaatccgttgacacctggtgtcaagg 206  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  30931939 ttaagatttggtgttaacgaatccgttgacacctggtgtcaagg 30931896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 167 - 213
Target Start/End: Complemental strand, 10120830 - 10120784
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  10120830 gatttggtgtcaaccaatccgttgacacctggtgtcaacggatccta 10120784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 13263520 - 13263566
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||    
T  13263520 agatttggtgtcaacgaatccattgacacctggtgtcaacggatcct 13263566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 25468558 - 25468512
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||    
T  25468558 agatttggtgtcaatgaatccgttgacacctggtgtcaatggatcct 25468512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 30932799 - 30932845
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||    
T  30932799 agatttggtgccaacgaatccgttgacacctggtgtcaacggatcct 30932845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 50271759 - 50271833
Alignment:
Q  138 cctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||| ||||||||  |||  |||||||||||||||||||||| | |||| |||||||||||| |||||||    
T  50271759 cctttagatcaaaagaaatcaacagttaagatttggtgtcaacgaattcattgatacctggtgtcaacggatcct 50271833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 27256718 - 27256767
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||| ||||    
T  27256718 atttggtgtcaacgaatacgttgacacctggtgtcaacggatcctgtctc 27256767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 204
Target Start/End: Original strand, 28182073 - 28182114
Alignment:
Q  163 ttaagatttggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  28182073 ttaagatttggtgtcaaagaatccgttgacacctggtgtcaa 28182114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 34308519 - 34308470
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||| ||||    
T  34308519 atttggtgtcaacgaatacgttgacacctggtgtcaacggatcctgtctc 34308470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 46391872 - 46391921
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||| ||||    
T  46391872 atttgatgtcaacgaatccgttgacacctggtgtcaacggatcctgtctc 46391921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 37853109 - 37853185
Alignment:
Q  136 gacctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||| |||||||||||||||  || |  ||| |||||||||||||||||||||||||||||| ||| || |||||||    
T  37853109 gaccattagattaaaagaaataaatggctaaaatttggtgtcaacgaatccgttgacacctgatgttaacggatcct 37853185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 168938 - 168891
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    |||||||||||||| ||||||| |||||||||||||||| ||||||||    
T  168938 agatttggtgtcaatgaatccgctgacacctggtgtcaacggatccta 168891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 201
Target Start/End: Original strand, 46812191 - 46812226
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgt 201  Q
    ||||||||||||||||||||||||||||||||||||    
T  46812191 agatttggtgtcaacgaatccgttgacacctggtgt 46812226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 4134079 - 4134025
Alignment:
Q  163 ttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||||||||||  ||||||||||| ||||  |||||||||||    
T  4134079 ttaagatttggtgtcaacgaatccagtgacacctggtatcaaaagatcctatctc 4134025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 7406293 - 7406247
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||| |||| |||||||||||||| |||||||    
T  7406293 agatttggtgtcaacgaattcgttaacacctggtgtcaacggatcct 7406247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 8987838 - 8987800
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  8987838 agatttggtgtcaacgaatccgttgacacctgatgtcaa 8987800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 11548848 - 11548802
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||| ||||||||||||| |||||||||||||||||| |||||||    
T  11548848 agatttagtgtcaacgaatctgttgacacctggtgtcaacggatcct 11548802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 25672000 - 25672074
Alignment:
Q  138 cctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||| |||| ||||||||  |||| ||||||||| |||||||||||||  ||||||| ||||||||| |||||||    
T  25672000 ccttcagatgaaaagaaatcaacgcttaagatttagtgtcaacgaatctattgacacttggtgtcaacggatcct 25672074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 28181581 - 28181535
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||| |||||||||| |||||||| |||||||    
T  28181581 agatttggtgtcaacgaattcgttgacaccaggtgtcaacggatcct 28181535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 36390372 - 36390418
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||| || ||||||||||||||||||| ||||||||    
T  36390372 gatttggtgtcaacggattcgttgacacctggtgtcaacggatccta 36390418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 45818067 - 45818025
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaagggatc 210  Q
    |||||||||||| |||||||||||||||||||||||| |||||    
T  45818067 atttggtgtcaatgaatccgttgacacctggtgtcaacggatc 45818025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 203
Target Start/End: Original strand, 8988552 - 8988589
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtca 203  Q
    |||||||||||||| |||||||||||||||||||||||    
T  8988552 agatttggtgtcaaggaatccgttgacacctggtgtca 8988589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 43252533 - 43252481
Alignment:
Q  164 taagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||| ||||||||||||||| ||||||| |||| |||||||    
T  43252533 taagatttggtgtcaacaaatccgttgacacct-gtgtcaacggattctatctc 43252481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 19171825 - 19171781
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcc 211  Q
    |||||||||||||||||||||||||||| || |||||| ||||||    
T  19171825 gatttggtgtcaacgaatccgttgacacttgatgtcaacggatcc 19171781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 169631 - 169678
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  169631 agatttggtgtcaataaattcgttgacacctggtgtcaacggatccta 169678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 32038525 - 32038478
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||||||| |||||||||||||| ||||  |||||||    
T  32038525 agatttggtgtcaacgaattcgttgacacctggtatcaaccgatccta 32038478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 213
Target Start/End: Original strand, 4135545 - 4135595
Alignment:
Q  163 ttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||||||||||  ||||||||||| || ||| ||||||||    
T  4135545 ttaagatttggtgtcaacgaatatgttgacacctgatgccaacggatccta 4135595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 12761501 - 12761547
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    |||||||||| ||||||| ||||||||||||||| ||| ||||||||    
T  12761501 gatttggtgttaacgaattcgttgacacctggtgccaatggatccta 12761547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 23026631 - 23026593
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    ||||||| |||||||||||||||||||||||| ||||||    
T  23026631 agatttgatgtcaacgaatccgttgacacctgatgtcaa 23026593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 26118749 - 26118675
Alignment:
Q  138 cctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||| ||||||||  |||| || | |  |||||||||| |||||||||||| |||||||||| |||||||    
T  26118749 cctttagatcaaaagaaatcaacggttcatacctggtgtcaacaaatccgttgacatctggtgtcaacggatcct 26118675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 36389823 - 36389777
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||| | |||||||||||||| |||||||| |||||||    
T  36389823 agatttggtgtcagcaaatccgttgacaccaggtgtcaacggatcct 36389777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 37576971 - 37576921
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    |||||||||||||||||||| |||||||| ||| |||| |||| |||||||    
T  37576971 gatttggtgtcaacgaatccattgacaccgggtatcaacggattctatctc 37576921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 25671217 - 25671172
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||| |||||||||||| ||||| |||||||| |||||||    
T  25671217 gatttggtgttaacgaatccgttaacaccaggtgtcaacggatcct 25671172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 213
Target Start/End: Original strand, 27790713 - 27790758
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    |||||||||||||  ||||||||||||||||||| || ||||||||    
T  27790713 atttggtgtcaacctatccgttgacacctggtgttaatggatccta 27790758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 46909367 - 46909412
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||| ||||| ||||||| |||||||||| |||||||    
T  46909367 gatttggtgtcaatgaatctgttgacatctggtgtcaacggatcct 46909412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 338
Target Start/End: Original strand, 46314566 - 46314630
Alignment:
Q  274 gaataaattacagccatcggattaaaaatgaatgactaagattaaaagataggttaagtgagttg 338  Q
    |||| |||| |||||||  |||||||| |||| | || |||||||||||| ||||||||||||||    
T  46314566 gaatgaattgcagccattagattaaaagtgaagggctgagattaaaagattggttaagtgagttg 46314630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2007 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold2007
Description:

Target: scaffold2007; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 135 - 212
Target Start/End: Complemental strand, 830 - 753
Alignment:
Q  135 tgacctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||| || |  ||||| || |||||||||||||||||||||||||| |||||||||||| |||||||    
T  830 tgacctttagattaagagtagtgaacgcttgagatttggtgtcaacgaatccgttgaaacctggtgtcaatggatcct 753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 8488526 - 8488470
Alignment:
Q  157 gaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8488526 gaacggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatggatccta 8488470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 138 - 213
Target Start/End: Complemental strand, 33435416 - 33435341
Alignment:
Q  138 cctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||| ||||||||  |||  ||||||||||||||||||||||||||| ||||| |||||||| ||||||||    
T  33435416 cctttagataaaaagaaatcaacagttaagatttggtgtcaacgaatccgttaacaccaggtgtcaacggatccta 33435341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 10171324 - 10171278
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  10171324 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 10171278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 26529516 - 26529562
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  26529516 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 26529562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 33436269 - 33436323
Alignment:
Q  158 aacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  33436269 aacgattaagatttggtgtcaacgaatccgttgacatctggtgtcaacggatcct 33436323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 19311828 - 19311868
Alignment:
Q  164 taagatttggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  19311828 taagatttggtgtcaacgaatccgttgacacctggtgtcaa 19311868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 19323031 - 19322983
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaa-gggatccta 213  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19323031 agatttggtgtcaacgaatccgttgacacctggtgtcaacgggatccta 19322983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 10171969 - 10172016
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  10171969 agatttggtgtcaacgaatgcgttgacacctggtgtcaacggatccta 10172016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 19323770 - 19323821
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||| ||||    
T  19323770 agatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgtctc 19323821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 26528871 - 26528824
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  26528871 agatttggtgtcaacgaatgcgttgacacctggtgtcaacggatccta 26528824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 9441285 - 9441234
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    |||||||||||||||| |||||||||||||||||||||| | ||||| ||||    
T  9441285 agatttggtgtcaacggatccgttgacacctggtgtcaacgaatcctgtctc 9441234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 12344942 - 12344895
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||| |||||||||| |||||||||||||||||| ||||||||    
T  12344942 agatttggtatcaacgaatctgttgacacctggtgtcaatggatccta 12344895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 21133222 - 21133277
Alignment:
Q  158 aacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    |||| |||||||||||||||||||||| |||| |||| ||||||||| ||||||||    
T  21133222 aacggttaagatttggtgtcaacgaattcgttaacacatggtgtcaacggatccta 21133277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 19311049 - 19311003
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||| |||||||| |||||||||||||| |||||||    
T  19311049 agatttggtgtcaacaaatccgttaacacctggtgtcaacggatcct 19311003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 1367014 - 1366965
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    ||||||||||||||||||||||||||||||  ||||| ||||||| ||||    
T  1367014 atttggtgtcaacgaatccgttgacacctgaagtcaacggatcctgtctc 1366965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 8489284 - 8489329
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||| ||||||| ||||||||||||||||||| |||||||    
T  8489284 gatttggtgttaacgaattcgttgacacctggtgtcaacggatcct 8489329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 18227778 - 18227734
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||    
T  18227778 gatttggtgtcaacgaatccgttgaca-ctggtgtcaacggatcct 18227734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 2512494 - 2512435
Alignment:
Q  158 aacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    |||| |||| ||||||||||||||||| |||||||| | |||||||| ||||||| ||||    
T  2512494 aacggttaatatttggtgtcaacgaattcgttgacatcaggtgtcaacggatcctgtctc 2512435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 3623223 - 3623176
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    |||||||||||||| |||| |||||||||||| |||||| ||||||||    
T  3623223 agatttggtgtcaaagaattcgttgacacctgatgtcaacggatccta 3623176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 20833941 - 20834016
Alignment:
Q  137 acctttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||| ||| ||||  |||| | || |||||||||||||| || |||| |||||||||||||| |||||||    
T  20833941 acctttagatcaaacgaaatcaacggtcaatatttggtgtcaacggattcgttaacacctggtgtcaacggatcct 20834016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 25060864 - 25060817
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    |||||| |||| |||||||| |||||||||||||||||| ||||||||    
T  25060864 agattttgtgttaacgaatctgttgacacctggtgtcaacggatccta 25060817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 3623751 - 3623797
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    |||||||||||||||||| |||| ||| |||||||||| ||||||||    
T  3623751 gatttggtgtcaacgaattcgttaacatctggtgtcaacggatccta 3623797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 5861934 - 5861896
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  5861934 agatttggtgtcaacgaatctgttggcacctggtgtcaa 5861896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 204
Target Start/End: Complemental strand, 19654026 - 19653980
Alignment:
Q  158 aacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    |||| |||||||||||||||||||| ||| |||||||| ||||||||    
T  19654026 aacggttaagatttggtgtcaacgagtccattgacaccaggtgtcaa 19653980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 9441985 - 9442026
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaagggat 209  Q
    ||||||||| |||||||||||||||||||| |||||| ||||    
T  9441985 atttggtgtgaacgaatccgttgacacctgatgtcaacggat 9442026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 9442066 - 9442107
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaagggat 209  Q
    ||||||||| |||||||||||||||||||| |||||| ||||    
T  9442066 atttggtgtgaacgaatccgttgacacctgatgtcaacggat 9442107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 28844913 - 28844852
Alignment:
Q  239 aggacatatcacatgagaatgactaatttatgtgagaataaattacagccatcggattaaaa 300  Q
    ||||||||||| |||||||||||    |||| ||||||| ||||||||||||| ||||||||    
T  28844913 aggacatatcatatgagaatgacattcttatatgagaatgaattacagccatcagattaaaa 28844852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 204
Target Start/End: Complemental strand, 505583 - 505547
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    |||||||||||||||||| ||||||||||| ||||||    
T  505583 atttggtgtcaacgaatctgttgacacctgatgtcaa 505547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 44; Significance: 6e-16; HSPs: 4)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 22066 - 22125
Alignment:
Q  158 aacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatcctatctc 217  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  22066 aacggttaaaatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctc 22125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 15862 - 15900
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  15862 agatttggtgtcaacgaattcgttgacacctggtgtcaa 15900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 15071 - 15025
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||||||| ||||||||||||||  |||||||| |||||||    
T  15071 agatttggtgtcaatgaatccgttgacactaggtgtcaacggatcct 15025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 15130 - 15084
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||||||| ||||||||||||||  |||||||| |||||||    
T  15130 agatttggtgtcaatgaatccgttgacactaggtgtcaacggatcct 15084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 26639 - 26594
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  26639 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 26594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 209
Target Start/End: Complemental strand, 39969 - 39901
Alignment:
Q  141 ttagattaaaagaaacgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggat 209  Q
    |||||| ||| ||||  |||| |||| ||||||||||||||||||||||||||||||||||||| ||||    
T  39969 ttagatcaaacgaaatcaacgattaatatttggtgtcaacgaatccgttgacacctggtgtcaacggat 39901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 23723 - 23779
Alignment:
Q  157 gaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||| || |||||||||||||||||||||||||||| |||||||||| ||||||||    
T  23723 gaacggttgagatttggtgtcaacgaatccgttgacaactggtgtcaatggatccta 23779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 5385 - 5429
Alignment:
Q  168 atttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||    
T  5385 atttggtgtcaacaaatccgttgacacctggtgtcaacggatcct 5429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 8295 - 8342
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatccta 213  Q
    ||||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  8295 agatttggtgttaacgaatacgttgacacctggtgtcaatggatccta 8342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1207 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1207
Description:

Target: scaffold1207; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 1634 - 1597
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    |||||||||||||||||| |||||||||||||||||||    
T  1634 gatttggtgtcaacgaattcgttgacacctggtgtcaa 1597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1213 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1213
Description:

Target: scaffold1213; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 1943 - 1900
Alignment:
Q  167 gatttggtgtcaacgaatccgttgacacctggtgtcaagggatc 210  Q
    ||||||||||||||||||||||||||| ||| |||||| |||||    
T  1943 gatttggtgtcaacgaatccgttgacatctgctgtcaacggatc 1900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 6891 - 6934
Alignment:
Q  169 tttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||  |||||||||||||||||| |||||||    
T  6891 tttggtgtcaacgaatttgttgacacctggtgtcaacggatcct 6934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 173 - 204
Target Start/End: Complemental strand, 181051 - 181020
Alignment:
Q  173 gtgtcaacgaatccgttgacacctggtgtcaa 204  Q
    ||||||||||||||||||||||||||||||||    
T  181051 gtgtcaacgaatccgttgacacctggtgtcaa 181020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 428905 - 428951
Alignment:
Q  166 agatttggtgtcaacgaatccgttgacacctggtgtcaagggatcct 212  Q
    ||||||||||||||||||| |||||| ||| |||||||| |||||||    
T  428905 agatttggtgtcaacgaattcgttgataccgggtgtcaacggatcct 428951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University