View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11857_high_26 (Length: 224)
Name: NF11857_high_26
Description: NF11857
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11857_high_26 |
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Alignment Details
Target: chr4 (Bit Score: 174; Significance: 9e-94; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 1636299 - 1636108
Alignment:
| Q |
13 |
gagaagaacactggttcatcatcatgttcttttcagacgaactctagaggaggcagtgaaacggagaaggaaattagggtttgatataatgaagaacaaa |
112 |
Q |
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| T |
1636299 |
gagaagaacactggttcatcatcatgttcttttcagacgaactcta-aggaggcagtgaaacagagaaggaaattagggtt-gatataatgaagaacaaa |
1636202 |
T |
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| Q |
113 |
gaaagcaatcaagatcgatctcgtggagaagagttaagaaaagggttagaaagcaagtgaatgagtgaagagttatattaatagtacttattag |
206 |
Q |
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| T |
1636201 |
gaaagcaatcaagatcgatctcgtggagaagagttaagaaaagggttagaaagcaagtgaatgagtgaagagttatattaatagtacttattag |
1636108 |
T |
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