View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11857_high_6 (Length: 452)

Name: NF11857_high_6
Description: NF11857
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11857_high_6
NF11857_high_6
[»] chr2 (34 HSPs)
chr2 (140-433)||(44282646-44282936)
chr2 (139-359)||(31686254-31686474)
chr2 (140-359)||(40255052-40255271)
chr2 (138-359)||(31787192-31787413)
chr2 (140-359)||(14380649-14380868)
chr2 (164-351)||(13896532-13896718)
chr2 (164-351)||(14037149-14037335)
chr2 (195-345)||(7474086-7474236)
chr2 (167-355)||(35457547-35457735)
chr2 (167-355)||(43341637-43341825)
chr2 (197-355)||(17481337-17481495)
chr2 (164-355)||(32496565-32496759)
chr2 (182-345)||(37640139-37640302)
chr2 (182-355)||(2442608-2442781)
chr2 (164-320)||(33597568-33597724)
chr2 (180-352)||(43695580-43695752)
chr2 (167-355)||(44003192-44003377)
chr2 (356-433)||(14379812-14379889)
chr2 (182-331)||(16765670-16765819)
chr2 (356-433)||(40254496-40254573)
chr2 (167-353)||(19860809-19860995)
chr2 (362-433)||(31686770-31686841)
chr2 (370-433)||(31786851-31786914)
chr2 (197-355)||(31047784-31047942)
chr2 (377-430)||(2443663-2443716)
chr2 (164-205)||(7474196-7474237)
chr2 (282-331)||(16467046-16467095)
chr2 (278-330)||(3853861-3853913)
chr2 (165-205)||(43695697-43695737)
chr2 (132-207)||(2213592-2213667)
chr2 (279-337)||(3680728-3680786)
chr2 (278-328)||(40951714-40951764)
chr2 (278-331)||(18511062-18511115)
chr2 (195-235)||(34433286-34433326)
[»] chr1 (57 HSPs)
chr1 (140-433)||(36495815-36496105)
chr1 (140-433)||(38627690-38627980)
chr1 (138-359)||(51487808-51488029)
chr1 (140-359)||(26821879-26822098)
chr1 (140-359)||(50978261-50978480)
chr1 (138-359)||(5270939-5271160)
chr1 (140-359)||(26999726-26999945)
chr1 (141-359)||(15353702-15353920)
chr1 (180-359)||(7592681-7592859)
chr1 (210-359)||(38843859-38844008)
chr1 (164-355)||(31099822-31100013)
chr1 (164-355)||(42137057-42137249)
chr1 (167-345)||(50031388-50031566)
chr1 (180-356)||(6706666-6706842)
chr1 (167-355)||(41512692-41512879)
chr1 (167-354)||(11829559-11829746)
chr1 (182-336)||(16342845-16342999)
chr1 (182-355)||(47655082-47655255)
chr1 (164-355)||(27576681-27576873)
chr1 (167-355)||(7385764-7385955)
chr1 (210-351)||(46408024-46408164)
chr1 (197-358)||(45179870-45180031)
chr1 (208-351)||(35606868-35607011)
chr1 (180-349)||(46033114-46033282)
chr1 (180-330)||(1763271-1763421)
chr1 (356-433)||(5271480-5271557)
chr1 (356-433)||(27000243-27000320)
chr1 (356-433)||(38843303-38843380)
chr1 (356-433)||(51488472-51488549)
chr1 (195-307)||(24076060-24076172)
chr1 (225-355)||(4484652-4484782)
chr1 (356-433)||(7593180-7593257)
chr1 (356-433)||(50979212-50979289)
chr1 (224-331)||(50521036-50521143)
chr1 (368-433)||(26821534-26821599)
chr1 (225-355)||(11050548-11050679)
chr1 (197-325)||(44740674-44740802)
chr1 (280-355)||(27067670-27067745)
chr1 (209-342)||(49431179-49431313)
chr1 (382-433)||(15353380-15353431)
chr1 (139-189)||(7592655-7592705)
chr1 (140-189)||(38843984-38844033)
chr1 (278-355)||(13509409-13509487)
chr1 (164-205)||(6706787-6706828)
chr1 (278-331)||(15884201-15884254)
chr1 (279-337)||(46581283-46581341)
chr1 (164-205)||(11829678-11829719)
chr1 (164-205)||(24076132-24076173)
chr1 (164-205)||(41512811-41512852)
chr1 (165-205)||(7592696-7592736)
chr1 (140-207)||(29441285-29441352)
chr1 (167-205)||(46033131-46033169)
chr1 (164-205)||(7385887-7385928)
chr1 (278-331)||(23628803-23628856)
chr1 (279-331)||(41904-41956)
chr1 (399-431)||(27576049-27576081)
chr1 (278-322)||(35569300-35569344)
[»] chr3 (46 HSPs)
chr3 (140-433)||(47697151-47697453)
chr3 (139-359)||(47140684-47140904)
chr3 (140-359)||(1528050-1528269)
chr3 (139-359)||(38469725-38469945)
chr3 (140-359)||(51124705-51124924)
chr3 (140-359)||(52693084-52693303)
chr3 (167-345)||(11264250-11264428)
chr3 (180-355)||(30811251-30811426)
chr3 (167-355)||(48253864-48254052)
chr3 (180-358)||(28884218-28884396)
chr3 (183-355)||(33025167-33025339)
chr3 (182-355)||(48181608-48181781)
chr3 (212-355)||(33329372-33329515)
chr3 (180-355)||(51230247-51230422)
chr3 (182-355)||(39252024-39252197)
chr3 (195-355)||(42074877-42075037)
chr3 (164-355)||(39267025-39267216)
chr3 (167-357)||(45488470-45488660)
chr3 (197-355)||(50392218-50392376)
chr3 (164-338)||(44329195-44329369)
chr3 (356-433)||(51128991-51129068)
chr3 (356-433)||(52692079-52692156)
chr3 (180-339)||(42275090-42275254)
chr3 (356-433)||(1527683-1527760)
chr3 (356-433)||(38469220-38469297)
chr3 (356-433)||(47141378-47141455)
chr3 (164-351)||(44610197-44610385)
chr3 (195-338)||(45151168-45151315)
chr3 (182-318)||(5104686-5104822)
chr3 (212-355)||(40237799-40237942)
chr3 (195-352)||(41536321-41536478)
chr3 (278-354)||(53686564-53686640)
chr3 (258-356)||(40244040-40244138)
chr3 (231-316)||(52764662-52764750)
chr3 (164-205)||(42074997-42075038)
chr3 (164-205)||(48253891-48253932)
chr3 (278-322)||(31618984-31619028)
chr3 (140-207)||(52813292-52813359)
chr3 (279-337)||(14651199-14651257)
chr3 (167-205)||(30811371-30811409)
chr3 (167-205)||(33025181-33025219)
chr3 (278-331)||(37698486-37698539)
chr3 (277-334)||(42475657-42475714)
chr3 (142-207)||(45423728-45423793)
chr3 (278-322)||(23496284-23496328)
chr3 (165-205)||(51230367-51230407)
[»] chr8 (45 HSPs)
chr8 (138-359)||(34773762-34773983)
chr8 (140-359)||(193928-194147)
chr8 (138-359)||(30982543-30982764)
chr8 (139-359)||(30211126-30211346)
chr8 (140-359)||(629256-629475)
chr8 (223-359)||(721532-721668)
chr8 (223-359)||(882639-882775)
chr8 (164-355)||(26575770-26575961)
chr8 (195-355)||(924573-924733)
chr8 (180-351)||(44240658-44240828)
chr8 (180-355)||(45275777-45275952)
chr8 (167-355)||(8417202-8417390)
chr8 (197-345)||(35801708-35801856)
chr8 (197-355)||(2026056-2026214)
chr8 (140-222)||(308902-308984)
chr8 (356-433)||(189785-189862)
chr8 (356-433)||(717389-717466)
chr8 (356-433)||(878496-878573)
chr8 (258-355)||(13016219-13016316)
chr8 (356-433)||(30984278-30984355)
chr8 (356-433)||(34774324-34774401)
chr8 (182-355)||(23018245-23018418)
chr8 (356-433)||(30210546-30210623)
chr8 (198-324)||(17073628-17073754)
chr8 (198-324)||(17574516-17574642)
chr8 (227-355)||(36821050-36821176)
chr8 (182-292)||(11071082-11071192)
chr8 (247-325)||(2598506-2598584)
chr8 (167-217)||(36820925-36820975)
chr8 (140-207)||(3465397-3465464)
chr8 (278-331)||(3619165-3619218)
chr8 (182-235)||(36820925-36820978)
chr8 (164-205)||(45275791-45275832)
chr8 (279-337)||(2071665-2071723)
chr8 (277-331)||(35615668-35615722)
chr8 (167-205)||(44240773-44240811)
chr8 (141-206)||(31246273-31246338)
chr8 (278-331)||(32606549-32606602)
chr8 (165-206)||(36820938-36820979)
chr8 (278-331)||(41289155-41289208)
chr8 (195-235)||(308919-308959)
chr8 (278-330)||(15206656-15206708)
chr8 (278-330)||(24297688-24297740)
chr8 (281-325)||(37458403-37458447)
chr8 (195-235)||(41289040-41289080)
[»] chr7 (40 HSPs)
chr7 (138-359)||(31011929-31012150)
chr7 (140-359)||(25340912-25341131)
chr7 (180-355)||(25191239-25191414)
chr7 (167-331)||(25472137-25472301)
chr7 (164-355)||(298031-298221)
chr7 (180-351)||(12910462-12910632)
chr7 (180-358)||(32451295-32451474)
chr7 (167-345)||(26827128-26827306)
chr7 (180-341)||(47085219-47085380)
chr7 (195-355)||(26826915-26827075)
chr7 (195-355)||(4035882-4036042)
chr7 (182-355)||(43664227-43664400)
chr7 (195-355)||(15000416-15000576)
chr7 (167-355)||(30139194-30139382)
chr7 (192-355)||(1999615-1999778)
chr7 (167-305)||(37371257-37371395)
chr7 (180-353)||(41065305-41065478)
chr7 (227-354)||(39857517-39857644)
chr7 (356-433)||(31012379-31012456)
chr7 (221-355)||(39957925-39958059)
chr7 (212-346)||(40233849-40233983)
chr7 (356-433)||(25341421-25341498)
chr7 (164-339)||(30825715-30825889)
chr7 (258-355)||(11341955-11342052)
chr7 (228-305)||(45203101-45203178)
chr7 (225-338)||(26169349-26169459)
chr7 (167-205)||(12910577-12910615)
chr7 (280-330)||(41625599-41625649)
chr7 (280-331)||(2839263-2839314)
chr7 (140-207)||(39634109-39634176)
chr7 (277-331)||(39634248-39634302)
chr7 (140-206)||(42752135-42752201)
chr7 (195-241)||(47157666-47157712)
chr7 (164-205)||(15000536-15000577)
chr7 (164-205)||(25472164-25472205)
chr7 (164-205)||(37371327-37371368)
chr7 (278-331)||(40903251-40903304)
chr7 (164-205)||(47157665-47157706)
chr7 (281-341)||(40725867-40725927)
chr7 (399-431)||(41064685-41064717)
[»] chr6 (24 HSPs)
chr6 (140-359)||(30019762-30019981)
chr6 (182-355)||(27825541-27825713)
chr6 (182-345)||(10683721-10683884)
chr6 (1-141)||(32409328-32409457)
chr6 (210-351)||(21515110-21515250)
chr6 (164-355)||(31745373-31745564)
chr6 (182-354)||(20837891-20838063)
chr6 (356-433)||(30018925-30019002)
chr6 (256-355)||(4147374-4147473)
chr6 (225-341)||(921607-921722)
chr6 (164-204)||(4147494-4147534)
chr6 (140-207)||(15151462-15151529)
chr6 (278-329)||(29409348-29409399)
chr6 (280-330)||(29682119-29682169)
chr6 (140-209)||(5584006-5584075)
chr6 (278-329)||(13739159-13739210)
chr6 (278-329)||(13744659-13744710)
chr6 (167-205)||(10683831-10683869)
chr6 (280-330)||(16122100-16122150)
chr6 (180-217)||(5584031-5584068)
chr6 (164-205)||(20837903-20837944)
chr6 (278-331)||(21254975-21255028)
chr6 (195-235)||(5584031-5584071)
chr6 (180-224)||(26274609-26274653)
[»] chr4 (53 HSPs)
chr4 (140-359)||(24035536-24035755)
chr4 (140-359)||(39382354-39382573)
chr4 (140-359)||(49128200-49128419)
chr4 (140-359)||(24247089-24247308)
chr4 (164-355)||(16202501-16202692)
chr4 (167-355)||(39733359-39733547)
chr4 (164-345)||(22605727-22605906)
chr4 (167-355)||(28963229-28963417)
chr4 (168-355)||(29385418-29385605)
chr4 (167-355)||(26459526-26459714)
chr4 (164-339)||(56561046-56561220)
chr4 (174-355)||(45106320-45106501)
chr4 (163-355)||(5937283-5937475)
chr4 (180-316)||(48407491-48407627)
chr4 (206-355)||(50523279-50523428)
chr4 (167-355)||(51833430-51833618)
chr4 (180-355)||(53663019-53663194)
chr4 (164-345)||(38768352-38768528)
chr4 (227-355)||(30417826-30417954)
chr4 (140-224)||(31430860-31430944)
chr4 (356-433)||(18140526-18140603)
chr4 (356-433)||(24246692-24246769)
chr4 (356-433)||(31431012-31431089)
chr4 (356-433)||(39382934-39383011)
chr4 (356-433)||(49127739-49127816)
chr4 (195-356)||(53403525-53403686)
chr4 (197-353)||(8510686-8510842)
chr4 (356-433)||(24038038-24038115)
chr4 (196-327)||(36212790-36212921)
chr4 (225-355)||(28912154-28912281)
chr4 (259-355)||(51677532-51677628)
chr4 (167-270)||(49724390-49724493)
chr4 (209-324)||(29810004-29810118)
chr4 (167-237)||(51677627-51677697)
chr4 (165-217)||(51677632-51677684)
chr4 (180-234)||(31430885-31430939)
chr4 (164-205)||(28963256-28963297)
chr4 (164-205)||(29385444-29385485)
chr4 (164-205)||(51677629-51677670)
chr4 (140-207)||(4649886-4649953)
chr4 (225-276)||(29490920-29490971)
chr4 (278-329)||(43781615-43781666)
chr4 (278-329)||(51922878-51922929)
chr4 (210-268)||(52056541-52056599)
chr4 (140-206)||(54488668-54488734)
chr4 (277-334)||(25312648-25312705)
chr4 (278-331)||(38305947-38306000)
chr4 (278-331)||(41866091-41866144)
chr4 (281-333)||(13167459-13167511)
chr4 (278-330)||(20191782-20191834)
chr4 (195-235)||(31430885-31430925)
chr4 (165-205)||(45106440-45106480)
chr4 (140-204)||(54683453-54683517)
[»] chr5 (42 HSPs)
chr5 (138-359)||(29541754-29541975)
chr5 (140-359)||(3260272-3260491)
chr5 (141-433)||(33115108-33115382)
chr5 (140-359)||(42663919-42664138)
chr5 (195-433)||(14082965-14083200)
chr5 (164-355)||(33386842-33387033)
chr5 (164-345)||(37046116-37046297)
chr5 (195-358)||(33082342-33082505)
chr5 (182-355)||(31905981-31906154)
chr5 (182-355)||(41741604-41741777)
chr5 (195-351)||(27737954-27738110)
chr5 (164-355)||(4295474-4295665)
chr5 (164-331)||(41039516-41039683)
chr5 (210-355)||(10900676-10900821)
chr5 (195-351)||(33232993-33233148)
chr5 (180-345)||(25256219-25256384)
chr5 (180-345)||(25320008-25320173)
chr5 (210-351)||(7071434-7071577)
chr5 (196-355)||(11017831-11017990)
chr5 (212-355)||(40979959-40980102)
chr5 (356-433)||(3260815-3260892)
chr5 (356-433)||(29542418-29542495)
chr5 (356-433)||(42663508-42663585)
chr5 (227-355)||(8957929-8958057)
chr5 (167-355)||(53008-53196)
chr5 (256-355)||(2526848-2526947)
chr5 (182-355)||(20069068-20069241)
chr5 (225-356)||(39236056-39236186)
chr5 (197-305)||(19357056-19357164)
chr5 (140-205)||(14083160-14083225)
chr5 (164-204)||(2526968-2527008)
chr5 (140-207)||(35847844-35847911)
chr5 (180-270)||(29367021-29367110)
chr5 (278-331)||(7178743-7178796)
chr5 (278-330)||(19784778-19784831)
chr5 (164-205)||(33233108-33233149)
chr5 (279-331)||(4569176-4569228)
chr5 (278-329)||(32454504-32454555)
chr5 (278-331)||(3747684-3747737)
chr5 (164-205)||(27737953-27737994)
chr5 (164-205)||(33082341-33082382)
chr5 (278-322)||(22482163-22482207)
[»] scaffold0097 (1 HSPs)
scaffold0097 (164-345)||(32428-32609)
[»] scaffold0068 (2 HSPs)
scaffold0068 (182-355)||(38252-38425)
scaffold0068 (164-205)||(38372-38413)
[»] scaffold0006 (1 HSPs)
scaffold0006 (167-355)||(92086-92274)
[»] scaffold0184 (1 HSPs)
scaffold0184 (225-355)||(9202-9332)
[»] scaffold0808 (2 HSPs)
scaffold0808 (182-355)||(4636-4810)
scaffold0808 (164-205)||(4757-4798)
[»] scaffold0003 (1 HSPs)
scaffold0003 (197-355)||(301665-301823)
[»] scaffold0069 (1 HSPs)
scaffold0069 (247-355)||(17360-17471)
[»] scaffold0041 (1 HSPs)
scaffold0041 (278-331)||(46714-46767)


Alignment Details
Target: chr2 (Bit Score: 259; Significance: 1e-144; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 140 - 433
Target Start/End: Complemental strand, 44282936 - 44282646
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgt 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  44282936 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgattctgacagaattgatttatgt 44282837  T
Q  240 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44282836 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 44282737  T
Q  340 ttaaatacaaataaatagaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||   |||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44282736 ttaaatacaaataaatagaa--atta-ctaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 44282646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 139 - 359
Target Start/End: Original strand, 31686254 - 31686474
Alignment:
Q  139 tgtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31686254 tgtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgattctgacagaattgatttatg 31686353  T
Q  239 tttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacata 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31686354 tttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacata 31686453  T
Q  339 gttaaatacaaataaatagaa 359  Q
    |||||||||||||||||||||    
T  31686454 gttaaatacaaataaatagaa 31686474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 140 - 359
Target Start/End: Complemental strand, 40255271 - 40255052
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgt 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  40255271 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgattctgacagaattgatttatgt 40255172  T
Q  240 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40255171 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 40255072  T
Q  340 ttaaatacaaataaatagaa 359  Q
    ||||||||||||||||||||    
T  40255071 ttaaatacaaataaatagaa 40255052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 138 - 359
Target Start/End: Complemental strand, 31787413 - 31787192
Alignment:
Q  138 atgtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttat 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  31787413 atgtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttggcagaattgattctgacagaattgatttat 31787314  T
Q  238 gtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacat 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31787313 gtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacat 31787214  T
Q  338 agttaaatacaaataaatagaa 359  Q
    ||||||||||||||||||||||    
T  31787213 agttaaatacaaataaatagaa 31787192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 140 - 359
Target Start/End: Complemental strand, 14380868 - 14380649
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgt 239  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14380868 gtgtgtgtttggttctgaggtgtgtagaatttattctgacagaattgattctgaaagaattgattttgacagaattgattctgacagaattgatttatgt 14380769  T
Q  240 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14380768 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 14380669  T
Q  340 ttaaatacaaataaatagaa 359  Q
    ||||||||||||||||||||    
T  14380668 ttaaatacaaataaatagaa 14380649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 164 - 351
Target Start/End: Complemental strand, 13896718 - 13896532
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattga 263  Q
    |||||||||||||||||||||||||||||| |||||||||| | |||||||| | ||||| ||||||||||||||||||||| |||||||| ||||||||    
T  13896718 tagaattgattctgacagaattgattctgatagaattgattctaacagaatttattctgagagaattgatttatgtttggatacaataatgtagaattga 13896619  T
Q  264 ttaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaat 351  Q
    ||||||| | ||| |||||||||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||| |||||| ||||    
T  13896618 ttaaacaaactgaatgttgtttggatagtttt-atcaaaattgcttttgaatgtataattactaaaatggacatagctaaatagaaat 13896532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 164 - 351
Target Start/End: Complemental strand, 14037335 - 14037149
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattga 263  Q
    |||||||||||||||||||||||||||||| |||||||||| | |||||||| | ||||| ||||||||||||||||||||| |||||||| ||||||||    
T  14037335 tagaattgattctgacagaattgattctgatagaattgattctaacagaatttattctgagagaattgatttatgtttggatacaataatgtagaattga 14037236  T
Q  264 ttaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaat 351  Q
    ||||||| | ||| |||||||||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||| |||||| ||||    
T  14037235 ttaaacaaactgaatgttgtttggatagtttt-atcaaaattgcttttgaatgtataattactaaaatggacatagctaaatagaaat 14037149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 195 - 345
Target Start/End: Complemental strand, 7474236 - 7474086
Alignment:
Q  195 agaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 294  Q
    |||||||||| |||||||||||| | ||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||    
T  7474236 agaattgattctgacagaattgattttgagagaattgatttatgtttggatacaataatgcagaattgattaaacaaaatgaatgttgtttggatagttt 7474137  T
Q  295 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaat 345  Q
    | ||||||||| ||||||||||||||||||| ||||| ||||||| |||||    
T  7474136 ttatcaaaattgcttttgaatgtataattactaaaatggacatagctaaat 7474086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 167 - 355
Target Start/End: Original strand, 35457547 - 35457735
Alignment:
Q  167 aattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgatta 266  Q
    |||||||||||| |||| ||| ||||| |||||||||| ||||| |||||| | ||| ||||||||||||||||||||| |||||||||||||||| |||    
T  35457547 aattgattctgatagaactgactctgatagaattgattatgacataattgattttgagagaattgatttatgtttggatacaataatgcagaattgttta 35457646  T
Q  267 aacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||| | ||| |||||||||||||||||| || |||||| ||||||||||||||||||| ||||| ||||||| ||||| ||| |||||    
T  35457647 aacaaactgaatgttgtttggatagtttttattaaaattgcttttgaatgtataattactaaaatggacatagctaaattcaagtaaat 35457735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 167 - 355
Target Start/End: Original strand, 43341637 - 43341825
Alignment:
Q  167 aattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgatta 266  Q
    |||||||||| | |||||||||||||| | |||||||| ||||| |||||| | ||| | ||||||||||||||||||| ||||||||||||||||||||    
T  43341637 aattgattctaatagaattgattctgataaaattgattctgacataattgattttgagataattgatttatgtttggatacaataatgcagaattgatta 43341736  T
Q  267 aacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||| | | | |||||||||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||| ||||| ||| |||||    
T  43341737 aacaaactaaatgttgtttggatagtttttatcaaaattgcttttgaatgtataattactaaaatggacatagctaaattcaagtaaat 43341825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 197 - 355
Target Start/End: Complemental strand, 17481495 - 17481337
Alignment:
Q  197 aattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 296  Q
    |||||||| ||||| |||||| | ||| ||||||||||||||||||||| |||||||||||||||||||||||| | ||| ||||||||||||||||||     
T  17481495 aattgattctgacataattgattttgagagaattgatttatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagttttt 17481396  T
Q  297 atcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    ||||||||| ||||||||||||||| ||| ||||| ||||||||||||| ||| |||||    
T  17481395 atcaaaattgcttttgaatgtataagtactaaaatggacatagttaaattcaagtaaat 17481337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 164 - 355
Target Start/End: Original strand, 32496565 - 32496759
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaat---tgatttatgtttggatgcaataatgcagaat 260  Q
    ||||||||||||||| | |||||||||||| |||||||||| |||||||||||| | ||| |||||   |||||||||||||||| |||||||||| |||    
T  32496565 tagaattgattctgagataattgattctgatagaattgattatgacagaattgattttgagagaataattgatttatgtttggatacaataatgcataat 32496664  T
Q  261 tgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    ||||||| || | ||| ||||||||| |||||||| ||| |||||  |||||||||||||||||| ||||||||||||| ||||| ||| |||||    
T  32496665 tgattaagcaaactgaatgttgtttgaatagtttttatcgaaattgtttttgaatgtataattactaaaatagacatagctaaattcaagtaaat 32496759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 182 - 345
Target Start/End: Original strand, 37640139 - 37640302
Alignment:
Q  182 aattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgtt 281  Q
    |||||||||||| || ||||||| ||| |||||||| | | | ||||||||||||||||||||| |||||||||| ||||||||||||| |||||  |||    
T  37640139 aattgattctgacagtattgattctgatagaattgattgtaatagaattgatttatgtttggatacaataatgcataattgattaaacaaaatgaacgtt 37640238  T
Q  282 gtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaat 345  Q
    |||||||||||||| |||||||||  |||||||||||||||||| ||||| ||||||| |||||    
T  37640239 gtttggatagtttttatcaaaattgattttgaatgtataattactaaaatggacatagctaaat 37640302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 182 - 355
Target Start/End: Original strand, 2442608 - 2442781
Alignment:
Q  182 aattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgtt 281  Q
    |||| ||| ||| |||||||||||   ||||||||| | ||| ||||||||||||||||||||| | ||||   |||||||||||||||||| || ||||    
T  2442608 aattaattttgacagaattgatttcatcagaattgattttgagagaattgatttatgtttggatacgataacatagaattgattaaacagaaagaatgtt 2442707  T
Q  282 gtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    ||||||||||||||||||||||||| |||||||||||||||||  ||||| ||||||| |||||| ||||||||    
T  2442708 gtttggatagttttgatcaaaattatttttgaatgtataattattaaaatggacatagctaaataaaaataaat 2442781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 164 - 320
Target Start/End: Original strand, 33597568 - 33597724
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattga 263  Q
    ||||||||||||||||| |||||||||||| |||||||||| ||  |||||||| | ||| ||||||||||||||||||||| |||||||  | ||||||    
T  33597568 tagaattgattctgacaaaattgattctgatagaattgattctggtagaattgattttgagagaattgatttatgtttggatacaataatataaaattga 33597667  T
Q  264 ttaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtata 320  Q
    ||||||| | | |  |||||||||||||||||||||||||||| |||||||||||||    
T  33597668 ttaaacaaactaaaggttgtttggatagttttgatcaaaattatttttgaatgtata 33597724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 180 - 352
Target Start/End: Complemental strand, 43695752 - 43695580
Alignment:
Q  180 agaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattg 279  Q
    ||||||||||||   |||||||||| ||||| |||||| | ||| |||||||||||||||||||||  ||||||| ||||||||||||| ||||| | ||    
T  43695752 agaattgattctaggagaattgattctgacataattgattttgaaagaattgatttatgtttggatataataatgtagaattgattaaagagaataaatg 43695653  T
Q  280 ttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaata 352  Q
    ||||||||||||||| ||||||||||  |||||||||||||||||| |||||  |||| | ||||||||||||    
T  43695652 ttgtttggatagtttcgatcaaaattgtttttgaatgtataattactaaaatgaacattgctaaatacaaata 43695580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 167 - 355
Target Start/End: Complemental strand, 44003377 - 44003192
Alignment:
Q  167 aattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgatta 266  Q
    |||||||| ||||| |||||||||||| |||||||||| | ||| |||||| | ||| |||||||||||| |||||||| ||||||||||||||||||||    
T  44003377 aattgattatgacataattgattctgatagaattgattataacataattgattttgagagaattgatttacgtttggatacaataatgcagaattgatta 44003278  T
Q  267 aacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||| | | |    ||||| |||| ||||||||||||||| |||||||||||||||||| ||||  ||||||| |||||| ||||||||    
T  44003277 aacaaattaa---atgtttagatatttttgatcaaaattaattttgaatgtataattactaaaacggacatagctaaatataaataaat 44003192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 356 - 433
Target Start/End: Complemental strand, 14379889 - 14379812
Alignment:
Q  356 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14379889 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 14379812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 182 - 331
Target Start/End: Original strand, 16765670 - 16765819
Alignment:
Q  182 aattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgtt 281  Q
    ||||||||| |  |||||||||| | |||||||| | | ||| ||||||||||||||||| ||| |||||||| ||||||||||||||| | ||| ||||    
T  16765670 aattgattccggtagaattgattctaacagaattaattttgagagaattgatttatgtttagatacaataatgtagaattgattaaacaaactgaatgtt 16765769  T
Q  282 gtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 331  Q
     ||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  16765770 atttggatagttttgatcaaaattgcttttgaatgtataattactaaaat 16765819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 356 - 433
Target Start/End: Complemental strand, 40254573 - 40254496
Alignment:
Q  356 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40254573 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 40254496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 167 - 353
Target Start/End: Complemental strand, 19860995 - 19860809
Alignment:
Q  167 aattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgatta 266  Q
    |||||||| ||||| |||||||| ||| | || ||||||||| | |||||| | ||| |||||||||||| |||||||| |||||||||| |||||||||    
T  19860995 aattgattatgacataattgattatgatataactgattttgaaataattgattttgagagaattgatttacgtttggatacaataatgcaaaattgatta 19860896  T
Q  267 aacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataa 353  Q
    |||  | | | |||  | |||||| ||||||||||||||  |||| ||||||||||||| ||||||||||||| |||||||||||||    
T  19860895 aacccactaaatgtcatgtggatatttttgatcaaaattgtttttaaatgtataattactaaaatagacatagctaaatacaaataa 19860809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 362 - 433
Target Start/End: Original strand, 31686770 - 31686841
Alignment:
Q  362 gttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31686770 gttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 31686841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 370 - 433
Target Start/End: Complemental strand, 31786914 - 31786851
Alignment:
Q  370 aattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31786914 aattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 31786851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 197 - 355
Target Start/End: Original strand, 31047784 - 31047942
Alignment:
Q  197 aattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 296  Q
    ||||||||||| || |||||| |   ||| |||| |||||| ||||||| |||||||||| ||||||||||||| |||   ||||||||||||  | ||     
T  31047784 aattgattttgtcataattgagttacacaaaatttatttatatttggatacaataatgcataattgattaaacaaaatagatgttgtttggatgatgttt 31047883  T
Q  297 atcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    ||||||| |  |||||||| ||||||||  ||||| |||||| ||||||||||||||||    
T  31047884 atcaaaaatgtttttgaatttataattattaaaatggacataattaaatacaaataaat 31047942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 430
Target Start/End: Original strand, 2443663 - 2443716
Alignment:
Q  377 gagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaag 430  Q
    |||||||| ||||||||| || ||||||||||||||||||||||||||| ||||    
T  2443663 gagggcagtgatggaattgatggaattgagggtgtagaattgattctagaaaag 2443716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 7474237 - 7474196
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattt 205  Q
    |||||||||||||||||||||||||| ||| |||||||||||    
T  7474237 tagaattgattctgacagaattgattttgagagaattgattt 7474196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 331
Target Start/End: Complemental strand, 16467095 - 16467046
Alignment:
Q  282 gtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 331  Q
    ||||||||||||| ||||||||||| ||||  ||||||||||||||||||    
T  16467095 gtttggatagtttagatcaaaattaatttttgatgtataattaccaaaat 16467046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 330
Target Start/End: Complemental strand, 3853913 - 3853861
Alignment:
Q  278 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaa 330  Q
    |||||||||||||||||  ||||||||| ||||||||||| |||||| |||||    
T  3853913 tgttgtttggatagtttgaatcaaaattgcttttgaatgtgtaattatcaaaa 3853861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 43695737 - 43695697
Alignment:
Q  165 agaattgattctgacagaattgattctgaaagaattgattt 205  Q
    |||||||||||||||| |||||||| |||||||||||||||    
T  43695737 agaattgattctgacataattgattttgaaagaattgattt 43695697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 207
Target Start/End: Complemental strand, 2213667 - 2213592
Alignment:
Q  132 gagttgatgtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttg 207  Q
    |||||||||||||||||||||   | |||| | |||||||||| ||| |||||||| | ||| |||||||||||||    
T  2213667 gagttgatgtgtgtgtttggtatagcggtggggagaattgattttgatagaattgagtttgagagaattgattttg 2213592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 337
Target Start/End: Complemental strand, 3680786 - 3680728
Alignment:
Q  279 gttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacat 337  Q
    |||||||||||| |||  ||||||||  |||||||| |||||||||||||| |||||||    
T  3680786 gttgtttggataatttgaatcaaaataccttttgaaagtataattaccaaattagacat 3680728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 328
Target Start/End: Original strand, 40951714 - 40951764
Alignment:
Q  278 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaa 328  Q
    |||||||||||||||||  |  ||||||| |||||||||||||||||||||    
T  40951714 tgttgtttggatagtttaaagtaaaattatttttgaatgtataattaccaa 40951764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 331
Target Start/End: Complemental strand, 18511115 - 18511062
Alignment:
Q  278 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 331  Q
    ||||||||||||| |||  |||||||||  ||||||||| ||||||||||||||    
T  18511115 tgttgtttggataatttaaatcaaaattgattttgaatgcataattaccaaaat 18511062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 34433286 - 34433326
Alignment:
Q  195 agaattgattttgacagaattgactctgacagaattgattt 235  Q
    |||||||||||||| |||||||| | |||||||||||||||    
T  34433286 agaattgattttgatagaattgagtttgacagaattgattt 34433326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 259; Significance: 1e-144; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 140 - 433
Target Start/End: Original strand, 36495815 - 36496105
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgt 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  36495815 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgattctgacagaattgatttatgt 36495914  T
Q  240 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36495915 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 36496014  T
Q  340 ttaaatacaaataaatagaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||   |||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36496015 ttaaatacaaataaatagaa--atta-ctaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 36496105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 140 - 433
Target Start/End: Complemental strand, 38627980 - 38627690
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgt 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  38627980 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgattctgacagaattgatttatgt 38627881  T
Q  240 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38627880 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 38627781  T
Q  340 ttaaatacaaataaatagaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||   |||   ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  38627780 ttaaatacaaataaatagaa--atta-ctaaattaatgagggcagggatgaaattaatagaattgagggtgtagaattgattctaggaaagtaa 38627690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 51487808 - 51488029
Alignment:
Q  138 atgtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttat 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  51487808 atgtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgattctgacagaattgatttat 51487907  T
Q  238 gtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacat 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51487908 gtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacat 51488007  T
Q  338 agttaaatacaaataaatagaa 359  Q
    ||||||||||||||||||||||    
T  51488008 agttaaatacaaataaatagaa 51488029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 140 - 359
Target Start/End: Complemental strand, 26822098 - 26821879
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgt 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26822098 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgattctgacagaattgatttatgt 26821999  T
Q  240 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26821998 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 26821899  T
Q  340 ttaaatacaaataaatagaa 359  Q
    ||||||||||||||||||||    
T  26821898 ttaaatacaaataaatagaa 26821879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 140 - 359
Target Start/End: Original strand, 50978261 - 50978480
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgt 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50978261 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgattctgacagaattgatttatgt 50978360  T
Q  240 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50978361 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 50978460  T
Q  340 ttaaatacaaataaatagaa 359  Q
    ||||||||||||||||||||    
T  50978461 ttaaatacaaataaatagaa 50978480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 5270939 - 5271160
Alignment:
Q  138 atgtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttat 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  5270939 atgtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattctgacagaattgattctgacagaattgatttat 5271038  T
Q  238 gtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacat 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5271039 gtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacat 5271138  T
Q  338 agttaaatacaaataaatagaa 359  Q
    ||||||||||||||||||||||    
T  5271139 agttaaatacaaataaatagaa 5271160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 140 - 359
Target Start/End: Original strand, 26999726 - 26999945
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgt 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26999726 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgattctgacagaattgatttatgt 26999825  T
Q  240 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26999826 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttgaatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 26999925  T
Q  340 ttaaatacaaataaatagaa 359  Q
    ||||||||||||||||||||    
T  26999926 ttaaatacaaataaatagaa 26999945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 141 - 359
Target Start/End: Complemental strand, 15353920 - 15353702
Alignment:
Q  141 tgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtt 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  15353920 tgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttggcagaattgattctgacagaattgatttatgtt 15353821  T
Q  241 tggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagt 340  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15353820 tggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagt 15353721  T
Q  341 taaatacaaataaatagaa 359  Q
    |||||||||||||||||||    
T  15353720 taaatacaaataaatagaa 15353702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 180 - 359
Target Start/End: Original strand, 7592681 - 7592859
Alignment:
Q  180 agaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattg 279  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7592681 agaattgattctgacagaattgattttgacagaattgattctgacagaattgatttatgtttg-atgcaataatgcagaattgattaaacagaatgattg 7592779  T
Q  280 ttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7592780 ttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaataaaaataaatagaa 7592859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 210 - 359
Target Start/End: Complemental strand, 38844008 - 38843859
Alignment:
Q  210 agaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattactt 309  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38844008 agaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgttcggatagttttgatcaaaattactt 38843909  T
Q  310 ttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38843908 ttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 38843859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 164 - 355
Target Start/End: Original strand, 31099822 - 31100013
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattga 263  Q
    |||||||||||||  || |||||||||||| |||||||||| ||||| |||||| | ||| ||||||||||||||||||||| |||||||| ||| ||||    
T  31099822 tagaattgattctagcataattgattctgatagaattgattctgacataattgattttgaaagaattgatttatgtttggatacaataatgtagagttga 31099921  T
Q  264 ttaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    ||||| ||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||    
T  31099922 ttaaagagaatgaatgttgtttggatggttttgatcaaaattgcttttgaatgtataattactaaaatggacatagctaaatacaaataaat 31100013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 164 - 355
Target Start/End: Original strand, 42137057 - 42137249
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattga 263  Q
    ||||||||||| ||| |||||||||||| | |||||||||||||||| |||||| | ||| ||||||||||||||||||  | |||||||||||||||||    
T  42137057 tagaattgattatgatagaattgattcttatagaattgattttgacaaaattgattttgagagaattgatttatgtttgtgtacaataatgcagaattga 42137156  T
Q  264 ttaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataatta-ccaaaatagacatagttaaatacaaataaat 355  Q
    ||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||   |||||  |||||| |||||||||||||||    
T  42137157 ttaaacagattgaatgttgtttggatagttttgatcaaaattgcttttgaatgtataattattaaaaatgaacatagctaaatacaaataaat 42137249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 167 - 345
Target Start/End: Complemental strand, 50031566 - 50031388
Alignment:
Q  167 aattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgatta 266  Q
    |||||||||||| |||||||||||||| | |||||||| |||||||||||| | ||| ||||||| ||||||||| ||| |||||||||| |||||||||    
T  50031566 aattgattctgatagaattgattctgatataattgattctgacagaattgattttgagagaattggtttatgttttgatacaataatgcataattgatta 50031467  T
Q  267 aacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaat 345  Q
    |||| | ||| |||||||||||||||||| ||||||||||||||||||| ||||||||| ||||| ||||||| |||||    
T  50031466 aacatactgaatgttgtttggatagtttttatcaaaattacttttgaatatataattactaaaatggacatagctaaat 50031388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 180 - 356
Target Start/End: Complemental strand, 6706842 - 6706666
Alignment:
Q  180 agaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattg 279  Q
    |||||||||||| | |||||||||| |||||||||||| | ||| ||||||||||||||||||||| |||||||||||||||||||||||| | | | ||    
T  6706842 agaattgattctaatagaattgattctgacagaattgattttgaaagaattgatttatgtttggatacaataatgcagaattgattaaacaaactaaatg 6706743  T
Q  280 ttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaata 356  Q
    |||||||||||||||| ||||||||| |||||||| |||||||||| ||||| ||||||| ||||| ||| ||||||    
T  6706742 ttgtttggatagtttttatcaaaattgcttttgaacgtataattactaaaatggacatagctaaattcaagtaaata 6706666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 167 - 355
Target Start/End: Complemental strand, 41512879 - 41512692
Alignment:
Q  167 aattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgatta 266  Q
    |||||| | |||||||||||||||||| |||||||||| |||||||||||| | ||| ||||||||||||||||| ||| ||||| |||||||||||| |    
T  41512879 aattgactttgacagaattgattctgatagaattgattctgacagaattgattttgagagaattgatttatgtttagatacaata-tgcagaattgataa 41512781  T
Q  267 aacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||| | ||| |||||||||||| |||||||||||||||  ||||||||||||||| || ||||| ||||||| |||||||||||||||    
T  41512780 aacaaactgaatgttgtttggattgttttgatcaaaattgattttgaatgtataatcactaaaatggacatagctaaatacaaataaat 41512692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 167 - 354
Target Start/End: Complemental strand, 11829746 - 11829559
Alignment:
Q  167 aattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgatta 266  Q
    |||||||| |||||||||||||||| | |||||||||| || ||||||||| | ||| ||||||||||||||||||||| ||||||   |||||||||||    
T  11829746 aattgattatgacagaattgattctaatagaattgattctgtcagaattgattttgaaagaattgatttatgtttggatacaataacatagaattgatta 11829647  T
Q  267 aacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaa 354  Q
    |||| ||||| ||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||| ||||||  |||||| |||||||    
T  11829646 aacaaaatgaatgtcgtttggatagttttgatcaaaattgcttttaaatgtataattactaaaatggacatatctaaataaaaataaa 11829559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 182 - 336
Target Start/End: Original strand, 16342845 - 16342999
Alignment:
Q  182 aattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgtt 281  Q
    |||||||||| | || ||||||||||| | |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||| ||||    
T  16342845 aattgattctaatagtattgattttgaaaaaattgattctgacagaattgatttatgtttggatacaataatgcagaattgattaaacaaactgaatgtt 16342944  T
Q  282 gtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagaca 336  Q
    |||||||||||||| ||||||||| |||||||| |||||||||| ||||| ||||    
T  16342945 gtttggatagtttttatcaaaattgcttttgaacgtataattactaaaatggaca 16342999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 182 - 355
Target Start/End: Original strand, 47655082 - 47655255
Alignment:
Q  182 aattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgtt 281  Q
    |||||||||||| |||||||||| | |||||||||| | | | ||||||||||||||||||||| |||||||||||||||||||||||| | ||| ||||    
T  47655082 aattgattctgatagaattgattctcacagaattgatttttagagaattgatttatgtttggatacaataatgcagaattgattaaacaaactgaatgtt 47655181  T
Q  282 gtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    ||||| ||| |||| |||||||||  |||||||||||||||||| ||||| ||||||||||||| ||| |||||    
T  47655182 gtttgaataatttttatcaaaattgtttttgaatgtataattactaaaatggacatagttaaattcaagtaaat 47655255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 164 - 355
Target Start/End: Complemental strand, 27576873 - 27576681
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgattt-atgtttggatgcaataatgcagaattg 262  Q
    |||||||||||||||||||||||||||||| ||||||||||    ||||||||| | ||| | ||| ||||| ||||||| || | ||||   |||||||    
T  27576873 tagaattgattctgacagaattgattctgatagaattgattccatcagaattgattttgagataatcgattttatgtttgaatacgataacatagaattg 27576774  T
Q  263 attaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||| ||||| ||||||| |||||| ||||||||    
T  27576773 attaaacagaatgaatgttgtttggatagttttgatcaaatttgcttttgaatgtataattactaaaatggacatagctaaataaaaataaat 27576681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 167 - 355
Target Start/End: Complemental strand, 7385955 - 7385764
Alignment:
Q  167 aattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgatta 266  Q
    |||||||||| | |||||||||||||  |||||||||| |||||||||| | | ||| ||||||||||||| ||||||| ||||||||||||||||||||    
T  7385955 aattgattctaatagaattgattctgttagaattgattctgacagaattaattttgagagaattgatttatttttggatacaataatgcagaattgatta 7385856  T
Q  267 aacagaatgattgttgtttggatag---ttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||| | ||| ||||||||||||||   |||| ||||||||| ||||||||||||||||||| ||||| || |||| ||||| ||| |||||    
T  7385855 aacaaactgaatgttgtttggatagttttttttatcaaaattgcttttgaatgtataattactaaaatggagatagctaaattcaagtaaat 7385764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 210 - 351
Target Start/End: Complemental strand, 46408164 - 46408024
Alignment:
Q  210 agaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattactt 309  Q
    |||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||| ||||||||| |||    
T  46408164 agaattgattctgagagaattgatttatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagtttt-atcaaaattgctt 46408066  T
Q  310 ttgaatgtataattaccaaaatagacatagttaaatacaaat 351  Q
    |||||||||||||||| |||||  ||||||||||||| ||||    
T  46408065 ttgaatgtataattactaaaatgaacatagttaaatagaaat 46408024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 197 - 358
Target Start/End: Complemental strand, 45180031 - 45179870
Alignment:
Q  197 aattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 296  Q
    |||||||||||||| |||||| | ||| | |||| ||||||||||||||  ||||||| |||||||||||||| |||||| |||||||| || |||||||    
T  45180031 aattgattttgacataattgattttgagataattcatttatgtttggataaaataatgtagaattgattaaacggaatgaatgttgttttgacagttttg 45179932  T
Q  297 atcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaataga 358  Q
    |||||||||  |||| ||||||||||||| ||||| ||||||| ||||||||||||||||||    
T  45179931 atcaaaattgtttttaaatgtataattactaaaatggacatagctaaatacaaataaataga 45179870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 208 - 351
Target Start/End: Complemental strand, 35607011 - 35606868
Alignment:
Q  208 acagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattac 307  Q
    |||||||||| ||||  |||| |||||||| ||||||||||||||| |||||||||||||||| ||||||| || |||| |||||||||||||||||| |    
T  35607011 acagaattgattctggaagaaatgatttatatttggatgcaataatacagaattgattaaacataatgatttttatttgaatagttttgatcaaaattgc 35606912  T
Q  308 ttttgaatgtataattaccaaaatagacatagttaaatacaaat 351  Q
    |||||||||||||||||| ||||| ||||||| |||||| ||||    
T  35606911 ttttgaatgtataattacgaaaattgacatagctaaatagaaat 35606868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 180 - 349
Target Start/End: Original strand, 46033114 - 46033282
Alignment:
Q  180 agaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattg 279  Q
    ||||||||| ||| || |||||||| ||| |||||||| | ||| |||||||||||||||||| || || ||||||| ||||||||||||| | ||| ||    
T  46033114 agaattgatcctggaaaaattgattctgatagaattgattttgaaagaattgatttatgtttgaataca-taatgcataattgattaaacaaattgaatg 46033212  T
Q  280 ttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaa 349  Q
    |||||||||||||||| |||||||||  |||||||||||||||||| ||||| ||||||| |||||||||    
T  46033213 ttgtttggatagtttttatcaaaattgattttgaatgtataattactaaaattgacatagctaaatacaa 46033282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 180 - 330
Target Start/End: Complemental strand, 1763421 - 1763271
Alignment:
Q  180 agaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattg 279  Q
    |||||||||||| ||| |||||||| ||| | |||||| | ||| ||||||||||||||||||||| |||||||| |||||||||||| | |||||  ||    
T  1763421 agaattgattctaaaaaaattgattctgataaaattgattttgagagaattgatttatgtttggatacaataatgtagaattgattaagcggaatggatg 1763322  T
Q  280 ttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaa 330  Q
    |||||| |||||||||||||||||||  |||||||||||||||||| ||||    
T  1763321 ttgtttagatagttttgatcaaaattgtttttgaatgtataattactaaaa 1763271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 356 - 433
Target Start/End: Original strand, 5271480 - 5271557
Alignment:
Q  356 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5271480 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 5271557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 356 - 433
Target Start/End: Original strand, 27000243 - 27000320
Alignment:
Q  356 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27000243 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 27000320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 356 - 433
Target Start/End: Complemental strand, 38843380 - 38843303
Alignment:
Q  356 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38843380 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 38843303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 356 - 433
Target Start/End: Original strand, 51488472 - 51488549
Alignment:
Q  356 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51488472 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 51488549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 195 - 307
Target Start/End: Complemental strand, 24076172 - 24076060
Alignment:
Q  195 agaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 294  Q
    |||||||||| |||||||||||| | ||| ||||||||||||||||||||| |||||||| ||||||||||||||| | ||| |||||||||||||||||    
T  24076172 agaattgattctgacagaattgattttgagagaattgatttatgtttggatacaataatgtagaattgattaaacaaactgaatgttgtttggatagttt 24076073  T
Q  295 tgatcaaaattac 307  Q
    |||||||||||||    
T  24076072 tgatcaaaattac 24076060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 225 - 355
Target Start/End: Original strand, 4484652 - 4484782
Alignment:
Q  225 agaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataatta 324  Q
    |||||| |||||||||||||| |||||||||||||||||||||| | | ||| |||||||||||||||||| | ||||||| ||||||||||||||||||    
T  4484652 agaattaatttatgtttggatacaataatgcagaattgattaaataaattgaatgttgtttggatagtttttaacaaaattgcttttgaatgtataatta 4484751  T
Q  325 ccaaaatagacatagttaaatacaaataaat 355  Q
    | |||||| |||||| ||||| ||| |||||    
T  4484752 ctaaaataaacatagctaaattcaagtaaat 4484782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 356 - 433
Target Start/End: Original strand, 7593180 - 7593257
Alignment:
Q  356 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7593180 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtggagaattgattctaggaaagtaa 7593257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 356 - 433
Target Start/End: Original strand, 50979212 - 50979289
Alignment:
Q  356 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50979212 agaagggttagaaaaattaatgaggtcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 50979289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 224 - 331
Target Start/End: Original strand, 50521036 - 50521143
Alignment:
Q  224 cagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataatt 323  Q
    |||||||||||||||||||||| |||||| |  ||||| |||||||||||||| ||||||||||||||||||||||||||||  |||||||| |||||||    
T  50521036 cagaattgatttatgtttggatacaataacgtggaattaattaaacagaatgaatgttgtttggatagttttgatcaaaattgtttttgaatatataatt 50521135  T
Q  324 accaaaat 331  Q
    || |||||    
T  50521136 actaaaat 50521143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 368 - 433
Target Start/End: Complemental strand, 26821599 - 26821534
Alignment:
Q  368 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26821599 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 26821534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 225 - 355
Target Start/End: Original strand, 11050548 - 11050679
Alignment:
Q  225 agaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgttt-ggatagttttgatcaaaattacttttgaatgtataatt 323  Q
    |||||| ||||||||| | || |||  ||||||||||||||||||| | | | |||||||| |||||||||||||||||||| |||||||||||||||||    
T  11050548 agaatttatttatgttagaatacaaggatgcagaattgattaaacaaactaaatgttgttttggatagttttgatcaaaattgcttttgaatgtataatt 11050647  T
Q  324 accaaaatagacatagttaaatacaaataaat 355  Q
    || ||||  |||||||||||||||||| ||||    
T  11050648 actaaaaaggacatagttaaatacaaacaaat 11050679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 197 - 325
Target Start/End: Complemental strand, 44740802 - 44740674
Alignment:
Q  197 aattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 296  Q
    |||||||| |||||||||| | | ||| ||||||  ||||| ||||||| |||||||| ||||||||||||||| | ||| ||||||||||||| ||||     
T  44740802 aattgattatgacagaattaattttgagagaattagtttatatttggatacaataatgtagaattgattaaacaaactgaatgttgtttggataattttt 44740703  T
Q  297 atcaaaattacttttgaatgtataattac 325  Q
    |||||||||| |||| |||||||||||||    
T  44740702 atcaaaattatttttaaatgtataattac 44740674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 280 - 355
Target Start/End: Complemental strand, 27067745 - 27067670
Alignment:
Q  280 ttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||||||||| |||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  27067745 ttgtttggattgttttgatcaaaatcacttttgaatctataattactaaaatagacatagttaaatacaaataaat 27067670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 209 - 342
Target Start/End: Complemental strand, 49431313 - 49431179
Alignment:
Q  209 cagaattgactctgac--agaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaatta 306  Q
    ||||||||| ||||||  |||||||||||||||||| ||  ||||||||| |||| |||||||| ||| | |||| ||| |||| ||| |||||||||||    
T  49431313 cagaattgattctgactgagaattgatttatgtttgtatataataatgcataatttattaaaca-aataaatgttatttagataatttcgatcaaaatta 49431215  T
Q  307 cttttgaatgtataattaccaaaatagacatagtta 342  Q
    ||||||||| ||||||||| ||||| ||||||||||    
T  49431214 cttttgaatatataattactaaaatggacatagtta 49431179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 382 - 433
Target Start/End: Complemental strand, 15353431 - 15353380
Alignment:
Q  382 cagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15353431 cagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 15353380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 7592655 - 7592705
Alignment:
Q  139 tgtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgatt 189  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7592655 tgtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgatt 7592705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 38844033 - 38843984
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgatt 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38844033 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgatt 38843984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 278 - 355
Target Start/End: Original strand, 13509409 - 13509487
Alignment:
Q  278 tgttgtttggatagttttg-atcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||||||| ||||| ||||||| ||||| ||| |||||    
T  13509409 tgttgtttggatagttttttatcaaaattgcttttgaatgtataattactaaaatggacatagctaaattcaagtaaat 13509487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 6706828 - 6706787
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattt 205  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  6706828 tagaattgattctgacagaattgattttgaaagaattgattt 6706787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 278 - 331
Target Start/End: Complemental strand, 15884254 - 15884201
Alignment:
Q  278 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 331  Q
    ||||||||||||||||| ||||||||||  ||||||||| ||||||||||||||    
T  15884254 tgttgtttggatagtttggatcaaaattgattttgaatgcataattaccaaaat 15884201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 337
Target Start/End: Original strand, 46581283 - 46581341
Alignment:
Q  279 gttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacat 337  Q
    |||||||||||| |||  |||||||||| |||||||||||||||||| ||| |||||||    
T  46581283 gttgtttggataatttgaatcaaaattatttttgaatgtataattacaaaattagacat 46581341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 11829719 - 11829678
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattt 205  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  11829719 tagaattgattctgtcagaattgattttgaaagaattgattt 11829678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 24076173 - 24076132
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattt 205  Q
    |||||||||||||||||||||||||| ||| |||||||||||    
T  24076173 tagaattgattctgacagaattgattttgagagaattgattt 24076132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 41512852 - 41512811
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattt 205  Q
    |||||||||||||||||||||||||| ||| |||||||||||    
T  41512852 tagaattgattctgacagaattgattttgagagaattgattt 41512811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 7592696 - 7592736
Alignment:
Q  165 agaattgattctgacagaattgattctgaaagaattgattt 205  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  7592696 agaattgattttgacagaattgattctgacagaattgattt 7592736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 29441352 - 29441285
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttg 207  Q
    ||||||||||| ||||| |||| |||||||||||| ||| |||||||| | |||  ||||||||||||    
T  29441352 gtgtgtgtttgattctgcggtgagtagaattgattttgatagaattgagtttgagtgaattgattttg 29441285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 46033131 - 46033169
Alignment:
Q  167 aattgattctgacagaattgattctgaaagaattgattt 205  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  46033131 aattgattctgatagaattgattttgaaagaattgattt 46033169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 7385928 - 7385887
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattt 205  Q
    |||||||||||||||||||||| ||| ||| |||||||||||    
T  7385928 tagaattgattctgacagaattaattttgagagaattgattt 7385887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 331
Target Start/End: Original strand, 23628803 - 23628856
Alignment:
Q  278 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 331  Q
    |||||||||| | ||||  |||||||||||||||||| ||||||||| ||||||    
T  23628803 tgttgtttgggtggtttgaatcaaaattacttttgaaagtataattatcaaaat 23628856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 41956 - 41904
Alignment:
Q  279 gttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 331  Q
    ||||||||||||| || ||||||||||  |||||| || ||||||||||||||    
T  41956 gttgtttggatagcttggatcaaaatttattttgagtgcataattaccaaaat 41904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 431
Target Start/End: Complemental strand, 27576081 - 27576049
Alignment:
Q  399 gaattgagggtgtagaattgattctaggaaagt 431  Q
    ||||||||||||||||||||||||||| |||||    
T  27576081 gaattgagggtgtagaattgattctagaaaagt 27576049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 322
Target Start/End: Original strand, 35569300 - 35569344
Alignment:
Q  278 tgttgtttggatagttttgatcaaaattacttttgaatgtataat 322  Q
    |||||||||||||||||  |||||||||  |||||||||||||||    
T  35569300 tgttgtttggatagtttgaatcaaaattgattttgaatgtataat 35569344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 258; Significance: 1e-143; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 140 - 433
Target Start/End: Complemental strand, 47697453 - 47697151
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgt 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  47697453 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttggcagaattgattctgacagaattgatttatgt 47697354  T
Q  240 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47697353 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 47697254  T
Q  340 ttaaatacaaataaatag--------aagggt-tagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaag 430  Q
    ||||||||||||||||||        |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47697253 ttaaatacaaataaatagaaattactaagggtgtagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaag 47697154  T
Q  431 taa 433  Q
    |||    
T  47697153 taa 47697151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 139 - 359
Target Start/End: Original strand, 47140684 - 47140904
Alignment:
Q  139 tgtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  47140684 tgtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgattctgacagaattgatttatg 47140783  T
Q  239 tttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacata 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47140784 tttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacata 47140883  T
Q  339 gttaaatacaaataaatagaa 359  Q
    |||||||||||||||||||||    
T  47140884 gttaaatacaaataaatagaa 47140904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 140 - 359
Target Start/End: Complemental strand, 1528269 - 1528050
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgt 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1528269 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgattctgacagaattgatttatgt 1528170  T
Q  240 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1528169 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 1528070  T
Q  340 ttaaatacaaataaatagaa 359  Q
    ||||||||||||||||||||    
T  1528069 ttaaatacaaataaatagaa 1528050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 139 - 359
Target Start/End: Complemental strand, 38469945 - 38469725
Alignment:
Q  139 tgtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatg 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  38469945 tgtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgattctgacagaattgatttatg 38469846  T
Q  239 tttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacata 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38469845 tttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacata 38469746  T
Q  339 gttaaatacaaataaatagaa 359  Q
    |||||||| ||||||||||||    
T  38469745 gttaaataaaaataaatagaa 38469725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 140 - 359
Target Start/End: Original strand, 51124705 - 51124924
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgt 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  51124705 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattctgacagaattgattctgacagaattgatttatgt 51124804  T
Q  240 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51124805 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 51124904  T
Q  340 ttaaatacaaataaatagaa 359  Q
    ||||||||||||||||||||    
T  51124905 ttaaatacaaataaatagaa 51124924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 140 - 359
Target Start/End: Complemental strand, 52693303 - 52693084
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgt 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  52693303 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgattctgacagaattgatttatgt 52693204  T
Q  240 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 339  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52693203 ttggatgcaataatacagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 52693104  T
Q  340 ttaaatacaaataaatagaa 359  Q
    ||||||||||||||||||||    
T  52693103 ttaaatacaaataaatagaa 52693084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 167 - 345
Target Start/End: Complemental strand, 11264428 - 11264250
Alignment:
Q  167 aattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgatta 266  Q
    |||||||||||||||| |||||||||| |||||||||| |||||||||||| | ||| |||||| |||||||||||||| ||| ||||||||||||||||    
T  11264428 aattgattctgacagagttgattctgatagaattgattgtgacagaattgattttgagagaattaatttatgtttggatacaaaaatgcagaattgatta 11264329  T
Q  267 aacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaat 345  Q
    |||| ||||| |||||||||||||||||| ||||||||| ||||||||||||||||||| |||||  |||||| |||||    
T  11264328 aacaaaatgaatgttgtttggatagtttttatcaaaattgcttttgaatgtataattactaaaatgaacatagctaaat 11264250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 180 - 355
Target Start/End: Complemental strand, 30811426 - 30811251
Alignment:
Q  180 agaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattg 279  Q
    |||||||||| ||| | |||||||| |||||||||||| | ||| ||||||||||||||||||||| ||||||| |||||||||||||||| | ||| ||    
T  30811426 agaattgattatgatataattgattctgacagaattgattttgagagaattgatttatgtttggatacaataattcagaattgattaaacaaactgaatg 30811327  T
Q  280 ttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    ||||||||||||||||||||||||||  |||||||||||||||||| ||||| ||||||| |||||||||||||||    
T  30811326 ttgtttggatagttttgatcaaaattgattttgaatgtataattactaaaatggacatagctaaatacaaataaat 30811251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 167 - 355
Target Start/End: Original strand, 48253864 - 48254052
Alignment:
Q  167 aattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgatta 266  Q
    |||||||||| | |||||||||| ||| |||||||||| |||||||||||| | ||| ||||||||||||||||| ||| |||||||||| |||||||||    
T  48253864 aattgattctaatagaattgattttgatagaattgattctgacagaattgattttgagagaattgatttatgtttagatacaataatgcaaaattgatta 48253963  T
Q  267 aacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||| | ||| |||||||||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||| ||||| ||| |||||    
T  48253964 aacaaactgaatgttgtttggatagtttttatcaaaattgcttttgaatgtataattactaaaatggacatagctaaattcaagtaaat 48254052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 180 - 358
Target Start/End: Complemental strand, 28884396 - 28884218
Alignment:
Q  180 agaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattg 279  Q
    |||||||||||||  |||||||||| ||||| |||||| | | | |||||| |||||||||||||| |||||||| | ||||||||||| ||||||| ||    
T  28884396 agaattgattctggtagaattgattctgacataattgattttaaaagaattaatttatgtttggatacaataatgtataattgattaaagagaatgaatg 28884297  T
Q  280 ttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaataga 358  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  28884296 ttgtttggatagttttaatcaaaattatttttgaatgtataattactgaaatggacatagttaaatacaaataaataga 28884218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 33025167 - 33025339
Alignment:
Q  183 attgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttg 282  Q
    ||||||||||| | |||||||| |||||||||||| | ||| ||||||||||||||||||||| |||||||||||||||||||||||| | ||| |||||    
T  33025167 attgattctgatataattgattctgacagaattgattttgagagaattgatttatgtttggatacaataatgcagaattgattaaacaaactgaatgttg 33025266  T
Q  283 tttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    ||||||||||||| |||||||||  |||||||| ||||||||| ||||||||||||| ||||| ||| |||||    
T  33025267 tttggatagtttttatcaaaattgtttttgaatctataattactaaaatagacatagctaaattcaagtaaat 33025339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 182 - 355
Target Start/End: Complemental strand, 48181781 - 48181608
Alignment:
Q  182 aattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgtt 281  Q
    |||||||| ||| | |||||||| ||| |||||||| | ||| | ||||||||||||||||||| |||||||||||||||||||||||| | ||| ||||    
T  48181781 aattgattttgacataattgattctgatagaattgattttgagataattgatttatgtttggatacaataatgcagaattgattaaacaaactgaatgtt 48181682  T
Q  282 gtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||||||||||||| ||||||||||||||||||| |||||||||| |||| ||||||| ||||| ||| |||||    
T  48181681 gtttggatagtttttatcaaaattacttttgaatatataattaccgaaatggacatagctaaattcaagtaaat 48181608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 212 - 355
Target Start/End: Original strand, 33329372 - 33329515
Alignment:
Q  212 aattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattactttt 311  Q
    |||||| | ||||| ||||||||||||||||||| |||||||| ||||||||||||||| ||||  ||||||||||||||||| |||||||||| |||||    
T  33329372 aattgattttgacataattgatttatgtttggatacaataatgtagaattgattaaacaaaatggatgttgtttggatagtttcgatcaaaattgctttt 33329471  T
Q  312 gaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||||||||||||| ||||| ||||||| |||||||||||||||    
T  33329472 gaatgtataattactaaaatggacatagctaaatacaaataaat 33329515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 180 - 355
Target Start/End: Complemental strand, 51230422 - 51230247
Alignment:
Q  180 agaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattg 279  Q
    |||||||||| ||||||||||||||  || |||||||| ||||| |||||||||||||||||| || |||||||||| ||||||||||||| | ||| ||    
T  51230422 agaattgattttgaaagaattgattccgagagaattgattctgagagaattgatttatgtttgaatacaataatgcaaaattgattaaacaaactgaatg 51230323  T
Q  280 ttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||||||||||||||| |||||| ||  |||||||||||||||||| |||||| |||||| ||||| ||| |||||    
T  51230322 ttgtttggatagtttttatcaaatttgattttgaatgtataattactaaaataaacatagctaaattcaagtaaat 51230247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 182 - 355
Target Start/End: Complemental strand, 39252197 - 39252024
Alignment:
Q  182 aattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgtt 281  Q
    |||||||||| | | |||||||| ||| |||||||| | |||   ||||||||||| ||||||| |||||||||||||||||||||||| | ||| ||||    
T  39252197 aattgattctaatataattgattctgatagaattgattttgagttaattgatttatatttggatacaataatgcagaattgattaaacaaactgaatgtt 39252098  T
Q  282 gtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||||||||| ||| |||||    
T  39252097 gtttggatagtttttatcaaaattgcttttgaatgtataattactaaaatggacatagttaaattcaagtaaat 39252024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 195 - 355
Target Start/End: Complemental strand, 42075037 - 42074877
Alignment:
Q  195 agaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 294  Q
    |||||||||| |||||||||||| | ||| ||||||||||||||||||||| ||||| |||| ||||||||||||| | ||| ||||||||||||||||     
T  42075037 agaattgattctgacagaattgattttgagagaattgatttatgtttggatacaatagtgcataattgattaaacaaactgaatgttgtttggatagttc 42074938  T
Q  295 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    | |||||||||  |||||||||||||||||| |||||||| |||||||||| ||| |||||    
T  42074937 ttatcaaaattgattttgaatgtataattactaaaatagagatagttaaattcaagtaaat 42074877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 164 - 355
Target Start/End: Original strand, 39267025 - 39267216
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattga 263  Q
    |||||||||||||| ||||||||||| ||  |||||||||| | |   |||||| | ||| ||||||||||||||||||||| ||||| || | ||||||    
T  39267025 tagaattgattctgccagaattgattatggtagaattgattctaatgtaattgattttgagagaattgatttatgtttggatacaatagtgtataattga 39267124  T
Q  264 ttaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    ||||||| | | | |||||||| ||||||||||||||||| | ||||||||||||||||||| ||||| ||||||| |||||||||||||||    
T  39267125 ttaaacaaactaaatgttgttttgatagttttgatcaaaactgcttttgaatgtataattactaaaatggacatagctaaatacaaataaat 39267216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 167 - 357
Target Start/End: Original strand, 45488470 - 45488660
Alignment:
Q  167 aattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgatta 266  Q
    |||||||| ||||| |||||||| ||| |||||||||||||| |||||||| | ||| | |||||||||| |||||||| |||||||||| |||||||||    
T  45488470 aattgattatgacataattgattatgatagaattgattttgaaagaattgattttgagataattgatttacgtttggatacaataatgcaaaattgatta 45488569  T
Q  267 aacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatag 357  Q
    |||  | | | |||  | |||||| ||||||||||||||  |||||||||||||| ||| ||||||||||||| |||||||||||||||||    
T  45488570 aacccactaaatgtcatgtggatatttttgatcaaaattgtttttgaatgtataagtactaaaatagacatagctaaatacaaataaatag 45488660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 197 - 355
Target Start/End: Original strand, 50392218 - 50392376
Alignment:
Q  197 aattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 296  Q
    |||| ||| |||||||||||| | ||| ||||||||||||||||||||| |||||||| ||||||||||||||| | ||| | ||||||||||| |||||    
T  50392218 aattaattctgacagaattgattttgatagaattgatttatgtttggatacaataatgtagaattgattaaacaaattgaatattgtttggataattttg 50392317  T
Q  297 atcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||||||||  |||||||||||||||||| || || ||||||| |||||||||||||||    
T  50392318 atcaaaattgattttgaatgtataattactaatatggacatagctaaatacaaataaat 50392376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 164 - 338
Target Start/End: Complemental strand, 44329369 - 44329195
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattga 263  Q
    |||||||||||||| || |||| | ||||| | |||||||| | ||| |||||  | | | |||||||||||||||||| || | |||||| | ||||||    
T  44329369 tagaattgattctggcataattaaatctgatataattgattctcacataattgttttttagagaattgatttatgtttgtatacgataatgtaaaattga 44329270  T
Q  264 ttaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacata 338  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  44329269 ttaaatagaatgaatgttgtttggatagttttgatcaaaattacttttgaatgtataattactaaaattgacata 44329195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 356 - 433
Target Start/End: Original strand, 51128991 - 51129068
Alignment:
Q  356 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51128991 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 51129068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 356 - 433
Target Start/End: Complemental strand, 52692156 - 52692079
Alignment:
Q  356 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52692156 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 52692079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 180 - 339
Target Start/End: Complemental strand, 42275254 - 42275090
Alignment:
Q  180 agaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattg 279  Q
    |||||||||| ||| ||| |||||| ||||| |||||| | ||| ||||||| ||||||||||||| |||||||||||||||||||||||| | ||| ||    
T  42275254 agaattgattttgatagagttgattatgacataattgattttgagagaattggtttatgtttggatacaataatgcagaattgattaaacaaactgaatg 42275155  T
Q  280 ttgtttggatagttttg-----atcaaaattacttttgaatgtataattaccaaaatagacatag 339  Q
    ||||||||||||||||      ||||||||| ||||||||||||||||||| ||||| |||||||    
T  42275154 ttgtttggatagttttttttttatcaaaattgcttttgaatgtataattactaaaatggacatag 42275090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 356 - 433
Target Start/End: Complemental strand, 1527760 - 1527683
Alignment:
Q  356 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1527760 agaagggttagaaaaattaatgagggcaggaatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 1527683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 356 - 433
Target Start/End: Complemental strand, 38469297 - 38469220
Alignment:
Q  356 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  38469297 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattataggaaagtaa 38469220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 356 - 433
Target Start/End: Original strand, 47141378 - 47141455
Alignment:
Q  356 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  47141378 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaagaaagtaa 47141455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 164 - 351
Target Start/End: Original strand, 44610197 - 44610385
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattttgacaga--attgactctgacagaattgatttatgtttggatgcaataatgcagaatt 261  Q
    ||||||||||||| | |||||||||| ||| ||||||||||   ||| |  ||||| | ||| | |||  |||||||||||||| |||||||| | ||||    
T  44610197 tagaattgattctaaaagaattgattttgatagaattgattcccacatataattgattttgagataatgaatttatgtttggatacaataatgtaaaatt 44610296  T
Q  262 gattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaat 351  Q
    |||||||| |||||  |||||||||||||| |||||||||||||  |||||||||||||||||| ||||| ||||||| |||||||||||    
T  44610297 gattaaacggaatggatgttgtttggatag-tttgatcaaaattgattttgaatgtataattactaaaatggacatagctaaatacaaat 44610385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 195 - 338
Target Start/End: Complemental strand, 45151315 - 45151168
Alignment:
Q  195 agaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 294  Q
    |||||||||| ||||| |||||| | ||  ||||||||||||||||||||| |||||||| ||||||||||||||| ||| | |||||||||||||||||    
T  45151315 agaattgattgtgacaaaattgattttgggagaattgatttatgtttggatacaataatgtagaattgattaaacaaaataaatgttgtttggatagttt 45151216  T
Q  295 tg----atcaaaattacttttgaatgtataattaccaaaatagacata 338  Q
    |     ||||||||| ||||||||||||||||||| ||||| ||||||    
T  45151215 ttttttatcaaaattgcttttgaatgtataattactaaaatggacata 45151168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 182 - 318
Target Start/End: Original strand, 5104686 - 5104822
Alignment:
Q  182 aattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgtt 281  Q
    ||||||||||||  |||||||||||| || |||||| | |   |||||||||||||||||||||  ||||||| ||| ||||||||||| ||||| ||||    
T  5104686 aattgattctgacggaattgattttgtcacaattgagtttagtagaattgatttatgtttggatataataatgtagatttgattaaacaaaatgaatgtt 5104785  T
Q  282 gtttggatagttttgatcaaaattacttttgaatgta 318  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  5104786 gtttgaataattttgatcaaaattacttttgaatgta 5104822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 212 - 355
Target Start/End: Complemental strand, 40237942 - 40237799
Alignment:
Q  212 aattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattactttt 311  Q
    |||||| | ||| |||||||||||||||||| || |||||| | ||||||||||||  || |||| ||||||||| |||||||| ||||||||| |||||    
T  40237942 aattgattttgagagaattgatttatgtttgaatacaataacgtagaattgattaattaggatgaatgttgtttgaatagtttttatcaaaattgctttt 40237843  T
Q  312 gaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||||||||||||  ||||| ||||||| |||||| ||||||||    
T  40237842 gaatgtataattattaaaatggacatagctaaataaaaataaat 40237799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 195 - 352
Target Start/End: Complemental strand, 41536478 - 41536321
Alignment:
Q  195 agaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 294  Q
    |||||||||| ||||| |||||| | ||| | ||||||||| ||||| ||| |||||||| ||||||||||||||  | | | |||||||||||| ||||    
T  41536478 agaattgattatgacataattgattttgagataattgatttttgtttagatacaataatgtagaattgattaaacgaactaaatgttgtttggatggttt 41536379  T
Q  295 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaata 352  Q
    |||||||||||  |||||||| ||||||||| ||||| ||||||  ||||||||||||    
T  41536378 tgatcaaaattgtttttgaatatataattactaaaattgacataactaaatacaaata 41536321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 278 - 354
Target Start/End: Original strand, 53686564 - 53686640
Alignment:
Q  278 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaa 354  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||| ||||| ||| ||||    
T  53686564 tgttgtttggatagtttttatcaaaattacttttgaatatataattactaaaatagacatagctaaattcaagtaaa 53686640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 40244138 - 40244040
Alignment:
Q  258 aattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaata 356  Q
    ||||||||||| | ||| | | |||||||||||||||| |||||||||  |||| ||||||||||||||||||| ||||| |||||||||| |||||||    
T  40244138 aattgattaaatataataaatattgtttggatagttttaatcaaaattgtttttaaatgtataattaccaaaatggacatggttaaatacatataaata 40244040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 231 - 316
Target Start/End: Complemental strand, 52764750 - 52764662
Alignment:
Q  231 gatttatgtttggatgcaataatgcaga---attgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatg 316  Q
    |||||||||||||||||||||||  | |   ||||||||||||||| || ||||||||| ||| |||||||||||||| |||| |||||    
T  52764750 gatttatgtttggatgcaataatatatacttattgattaaacagaacgaatgttgtttgaataattttgatcaaaattgctttagaatg 52764662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 42075038 - 42074997
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattt 205  Q
    |||||||||||||||||||||||||| ||| |||||||||||    
T  42075038 tagaattgattctgacagaattgattttgagagaattgattt 42074997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 48253891 - 48253932
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattt 205  Q
    |||||||||||||||||||||||||| ||| |||||||||||    
T  48253891 tagaattgattctgacagaattgattttgagagaattgattt 48253932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 322
Target Start/End: Original strand, 31618984 - 31619028
Alignment:
Q  278 tgttgtttggatagttttgatcaaaattacttttgaatgtataat 322  Q
    |||||||||||||||||  |||||||||| |||||||||||||||    
T  31618984 tgttgtttggatagtttgaatcaaaattaattttgaatgtataat 31619028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 52813359 - 52813292
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttg 207  Q
    ||||||||||||||||| |||| ||| |||||||| ||| |||||||| | |||  ||||||||||||    
T  52813359 gtgtgtgtttggttctgcggtgagtaaaattgattttgatagaattgagtttgagtgaattgattttg 52813292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 337
Target Start/End: Original strand, 14651199 - 14651257
Alignment:
Q  279 gttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacat 337  Q
    |||||||||||| |||  ||||||||  |||||||| |||||||||||||| |||||||    
T  14651199 gttgtttggataatttgaatcaaaatagcttttgaaagtataattaccaaattagacat 14651257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 30811409 - 30811371
Alignment:
Q  167 aattgattctgacagaattgattctgaaagaattgattt 205  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  30811409 aattgattctgacagaattgattttgagagaattgattt 30811371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 33025181 - 33025219
Alignment:
Q  167 aattgattctgacagaattgattctgaaagaattgattt 205  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  33025181 aattgattctgacagaattgattttgagagaattgattt 33025219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 331
Target Start/End: Original strand, 37698486 - 37698539
Alignment:
Q  278 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 331  Q
    |||||||||||||||||  |||||||||  ||||  ||||||||||||||||||    
T  37698486 tgttgtttggatagtttgaatcaaaattgattttacatgtataattaccaaaat 37698539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 42475714 - 42475657
Alignment:
Q  277 ttgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 334  Q
    ||||||||||||||  ||  ||||||||| |||||  |||||||||||||||||||||    
T  42475714 ttgttgtttggatacattgaatcaaaattgcttttagatgtataattaccaaaataga 42475657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 207
Target Start/End: Original strand, 45423728 - 45423793
Alignment:
Q  142 gtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttg 207  Q
    ||||||||||||||| ||||   | |||||||| || || |||||||||||| |||||||||||||    
T  45423728 gtgtgtttggttctgtggtggcgaaaattgattttggcataattgattctgatagaattgattttg 45423793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 322
Target Start/End: Complemental strand, 23496328 - 23496284
Alignment:
Q  278 tgttgtttggatagttttgatcaaaattacttttgaatgtataat 322  Q
    |||||||||||||||||  |||||||||  |||||||||||||||    
T  23496328 tgttgtttggatagtttgaatcaaaattgattttgaatgtataat 23496284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 51230407 - 51230367
Alignment:
Q  165 agaattgattctgacagaattgattctgaaagaattgattt 205  Q
    ||||||||||| || |||||||||||||| |||||||||||    
T  51230407 agaattgattccgagagaattgattctgagagaattgattt 51230367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 218; Significance: 1e-119; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 34773762 - 34773983
Alignment:
Q  138 atgtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttat 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  34773762 atgtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgattctgacagaattgatttat 34773861  T
Q  238 gtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacat 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34773862 gtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacat 34773961  T
Q  338 agttaaatacaaataaatagaa 359  Q
    ||||||||||||||||||||||    
T  34773962 agttaaatacaaataaatagaa 34773983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 140 - 359
Target Start/End: Complemental strand, 194147 - 193928
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgt 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  194147 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgattctgacagaattgatttatgt 194048  T
Q  240 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  194047 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 193948  T
Q  340 ttaaatacaaataaatagaa 359  Q
    ||||||||||||||||||||    
T  193947 ttaaatacaaataaatagaa 193928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 30982543 - 30982764
Alignment:
Q  138 atgtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttat 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  30982543 atgtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgattctgacagaattgatttat 30982642  T
Q  238 gtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacat 337  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30982643 gtttggatgcaataatgcagaattaattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacat 30982742  T
Q  338 agttaaatacaaataaatagaa 359  Q
    ||||||||||||||||||||||    
T  30982743 agttaaatacaaataaatagaa 30982764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 139 - 359
Target Start/End: Complemental strand, 30211346 - 30211126
Alignment:
Q  139 tgtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatg 238  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  30211346 tgtgtgtgtttggttctaaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgattctgacagaattgatttatg 30211247  T
Q  239 tttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacata 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30211246 tttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacata 30211147  T
Q  339 gttaaatacaaataaatagaa 359  Q
    |||||||||||||||||||||    
T  30211146 gttaaatacaaataaatagaa 30211126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 140 - 359
Target Start/End: Complemental strand, 629475 - 629256
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgt 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  629475 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattatgacagaattgattctgacagaattgatttatgt 629376  T
Q  240 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 339  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  629375 ttgaatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 629276  T
Q  340 ttaaatacaaataaatagaa 359  Q
    ||||||||||||||||||||    
T  629275 ttaaatacaaataaatagaa 629256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 223 - 359
Target Start/End: Complemental strand, 721668 - 721532
Alignment:
Q  223 acagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataat 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  721668 acagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataat 721569  T
Q  323 taccaaaatagacatagttaaatacaaataaatagaa 359  Q
    |||||||||||||||||||||||||||||||||||||    
T  721568 taccaaaatagacatagttaaatacaaataaatagaa 721532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 223 - 359
Target Start/End: Complemental strand, 882775 - 882639
Alignment:
Q  223 acagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataat 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  882775 acagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataat 882676  T
Q  323 taccaaaatagacatagttaaatacaaataaatagaa 359  Q
    |||||||||||||||||||||||||||||||||||||    
T  882675 taccaaaatagacatagttaaatacaaataaatagaa 882639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 164 - 355
Target Start/End: Complemental strand, 26575961 - 26575770
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattga 263  Q
    |||||||||||||||||||||||||| ||| |||||||||| ||| |||||||| | ||| ||||||||||||||||||||| |||||||  ||||||||    
T  26575961 tagaattgattctgacagaattgattttgatagaattgattctgatagaattgattttgagagaattgatttatgtttggatacaataatatagaattga 26575862  T
Q  264 ttaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    ||| | |||| |  |||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||    
T  26575861 ttagatagaagggatgttgtttggatagttttgatcaaaattgcttttgaatgtataattactaaaatggacatagctaaatacaaataaat 26575770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 195 - 355
Target Start/End: Complemental strand, 924733 - 924573
Alignment:
Q  195 agaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 294  Q
    ||||||||||||||| ||| ||| | ||| | |||||||||||||||||||||||||||||| ||||||||||||| | ||| | |||||| ||||||||    
T  924733 agaattgattttgaccgaaatgattttgagataattgatttatgtttggatgcaataatgcataattgattaaacaaactgaatattgtttagatagttt 924634  T
Q  295 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||    
T  924633 tgatcaaaattacttttgaatgtataattactaaaatggacatagttaaatacaagtaaat 924573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 180 - 351
Target Start/End: Complemental strand, 44240828 - 44240658
Alignment:
Q  180 agaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattg 279  Q
    |||||||||||||| | |||||||| ||| |||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||| | ||| ||    
T  44240828 agaattgattctgacaaaattgattctgatagaattgattctgagagaattgatttatgtttggatacaataatgcagaattgattaaacaaactgaatg 44240729  T
Q  280 ttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaat 351  Q
    |||||||||||||||| |||||||||  |||||||||||||||||| ||||| ||||||| |||||| ||||    
T  44240728 ttgtttggatagtttt-atcaaaattgtttttgaatgtataattactaaaatggacatagctaaataaaaat 44240658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 180 - 355
Target Start/End: Original strand, 45275777 - 45275952
Alignment:
Q  180 agaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattg 279  Q
    |||||||||||||| |||||||||| |||||||||||| | ||| ||||||||||||||||||||| ||| |||||| ||||||||||||| | ||| ||    
T  45275777 agaattgattctgatagaattgattctgacagaattgattttgagagaattgatttatgtttggatacaacaatgcaaaattgattaaacaaactgaatg 45275876  T
Q  280 ttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    || ||||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||| ||||| ||| |||||    
T  45275877 ttatttggatagtttttatcaaaattgcttttgaatgtataattactaaaatggacatagctaaattcaagtaaat 45275952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 167 - 355
Target Start/End: Complemental strand, 8417390 - 8417202
Alignment:
Q  167 aattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgatta 266  Q
    |||||||||||| | |||||||| ||| |||||| ||| ||||| |||||| | ||| |||||||||||||||||||||  |||||||||||||||||||    
T  8417390 aattgattctgaaataattgattttgagagaattaattctgacataattgattttgagagaattgatttatgtttggatataataatgcagaattgatta 8417291  T
Q  267 aacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||| | ||| |||||||| ||||||||| |||||||||||||||||||||| |||||| ||||| ||||||| ||||| ||| |||||    
T  8417290 aacaaattgaatgttgtttagatagttttaatcaaaattacttttgaatgtagaattactaaaatggacatagctaaattcaagtaaat 8417202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 35801708 - 35801856
Alignment:
Q  197 aattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 296  Q
    |||||||| ||| |||||||| | |||||||||||||||||||||| || |||||||||||||||||||||||| ||||| ||||||||||||||||||     
T  35801708 aattgattatgatagaattgattgtgacagaattgatttatgtttgaatacaataatgcagaattgattaaacaaaatgaatgttgtttggatagttttt 35801807  T
Q  297 atcaaaattacttttgaatgtataattaccaaaatagacatagttaaat 345  Q
    |||||||||  |||||||||||||||||| ||||| |||||||||||||    
T  35801808 atcaaaattgtttttgaatgtataattactaaaatggacatagttaaat 35801856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 197 - 355
Target Start/End: Complemental strand, 2026214 - 2026056
Alignment:
Q  197 aattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 296  Q
    |||||||| ||| |||||||| | ||| ||||||||||||||||| ||| |||||||||||||||||||||||| | ||| ||||||||||||||||||     
T  2026214 aattgattctgaaagaattgattttgagagaattgatttatgttttgatacaataatgcagaattgattaaacaaactgaatgttgtttggatagtttta 2026115  T
Q  297 atcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |  ||||||  |||||||||||||||||| ||||| ||||||| |||||||||||||||    
T  2026114 aaaaaaattgattttgaatgtataattactaaaatggacatagctaaatacaaataaat 2026056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 140 - 222
Target Start/End: Complemental strand, 308984 - 308902
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctg 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  308984 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgattctg 308902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 356 - 433
Target Start/End: Complemental strand, 189862 - 189785
Alignment:
Q  356 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  189862 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 189785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 356 - 433
Target Start/End: Complemental strand, 717466 - 717389
Alignment:
Q  356 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  717466 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 717389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 356 - 433
Target Start/End: Complemental strand, 878573 - 878496
Alignment:
Q  356 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  878573 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 878496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 258 - 355
Target Start/End: Complemental strand, 13016316 - 13016219
Alignment:
Q  258 aattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  13016316 aattgattaaacagaatgaatgttgttttaatagttttgatcaaaattacttttgaatgtataattactaaaatggacatagttaaatacaaataaat 13016219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 356 - 433
Target Start/End: Original strand, 30984278 - 30984355
Alignment:
Q  356 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30984278 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 30984355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 356 - 433
Target Start/End: Original strand, 34774324 - 34774401
Alignment:
Q  356 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34774324 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 34774401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 182 - 355
Target Start/End: Original strand, 23018245 - 23018418
Alignment:
Q  182 aattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgtt 281  Q
    |||||||||||| |||||||||| | | |||||||| | | | | |||||||||| |||||||| |||||||| | ||||||||||||| | ||| ||||    
T  23018245 aattgattctgatagaattgattctaatagaattgattgtaagataattgatttacgtttggatacaataatgtaaaattgattaaacacattgagtgtt 23018344  T
Q  282 gtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    ||||| ||||||||||||||||||  |||||||||||||||||| ||||  ||||||  |||||||| ||||||    
T  23018345 gtttgaatagttttgatcaaaattgtttttgaatgtataattactaaaaccgacataactaaatacatataaat 23018418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 356 - 433
Target Start/End: Complemental strand, 30210623 - 30210546
Alignment:
Q  356 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30210623 agaagggttagaaaaattaatgaggacagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 30210546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 198 - 324
Target Start/End: Original strand, 17073628 - 17073754
Alignment:
Q  198 attgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttga 297  Q
    ||||||| ||| |||||||| | ||| ||||||| ||||||||||||| |||||||||||||||||||||||| |   | |||||||||||||||||| |    
T  17073628 attgattctgatagaattgattttgaaagaattggtttatgtttggatacaataatgcagaattgattaaacaaacataatgttgtttggatagttttta 17073727  T
Q  298 tcaaaattacttttgaatgtataatta 324  Q
    ||||||||  |||||||||||||||||    
T  17073728 tcaaaattgtttttgaatgtataatta 17073754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 198 - 324
Target Start/End: Complemental strand, 17574642 - 17574516
Alignment:
Q  198 attgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttga 297  Q
    ||||||| ||| |||||||| | ||| ||||||| ||||||||||||| |||||||||||||||||||||||| |   | |||||||||||||||||| |    
T  17574642 attgattctgatagaattgattttgaaagaattggtttatgtttggatacaataatgcagaattgattaaacaaacataatgttgtttggatagttttta 17574543  T
Q  298 tcaaaattacttttgaatgtataatta 324  Q
    ||||||||  |||||||||||||||||    
T  17574542 tcaaaattgtttttgaatgtataatta 17574516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 227 - 355
Target Start/End: Original strand, 36821050 - 36821176
Alignment:
Q  227 aattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattacc 326  Q
    ||||||||||||||||||| |||||||||||||||||| |  || | ||| |||||||||||||||||| ||| ||||| |||||||||||||||||||     
T  36821050 aattgatttatgtttggatacaataatgcagaattgatga--caaactgaatgttgtttggatagttttcatcgaaattgcttttgaatgtataattact 36821147  T
Q  327 aaaatagacatagttaaatacaaataaat 355  Q
    ||||| ||||||  ||||| ||| |||||    
T  36821148 aaaatggacataactaaattcaagtaaat 36821176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 182 - 292
Target Start/End: Complemental strand, 11071192 - 11071082
Alignment:
Q  182 aattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgtt 281  Q
    |||||||||||  |||||||||| ||| | |||||| | ||| ||||||||||||||||||||| ||||||| |||||||||||||| | | ||| ||||    
T  11071192 aattgattctggcagaattgattctgatataattgattttgatagaattgatttatgtttggatacaataatacagaattgattaaataaattgaatgtt 11071093  T
Q  282 gtttggatagt 292  Q
    |||||||||||    
T  11071092 gtttggatagt 11071082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 247 - 325
Target Start/End: Complemental strand, 2598584 - 2598506
Alignment:
Q  247 caataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattac 325  Q
    ||||||||| |||||||||||||| |||||  ||||||| ||||||||||||||||||||||||||||  |||||||||    
T  2598584 caataatgctgaattgattaaacaaaatgaacgttgttttgatagttttgatcaaaattacttttgaaaatataattac 2598506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 36820925 - 36820975
Alignment:
Q  167 aattgattctgacagaattgattctgaaagaattgattttgacagaattga 217  Q
    ||||||||||||||||||||||||||| |||| ||||| ||||||||||||    
T  36820925 aattgattctgacagaattgattctgatagaactgattctgacagaattga 36820975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 3465397 - 3465464
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttg 207  Q
    ||||||||||||||||| |||| |||||||||||| ||| |||||||| | |||  ||||||||||||    
T  3465397 gtgtgtgtttggttctgcggtgagtagaattgattttgatagaattgagtttgagtgaattgattttg 3465464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 278 - 331
Target Start/End: Original strand, 3619165 - 3619218
Alignment:
Q  278 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 331  Q
    |||||||||||||||||  |||||||||  |||| |||||||||||||||||||    
T  3619165 tgttgtttggatagtttgaatcaaaattgattttaaatgtataattaccaaaat 3619218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 36820925 - 36820978
Alignment:
Q  182 aattgattctgaaagaattgattttgacagaattgactctgacagaattgattt 235  Q
    |||||||||||| |||||||||| ||| |||| ||| |||||||||||||||||    
T  36820925 aattgattctgacagaattgattctgatagaactgattctgacagaattgattt 36820978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 45275791 - 45275832
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattt 205  Q
    |||||||||||||||||||||||||| ||| |||||||||||    
T  45275791 tagaattgattctgacagaattgattttgagagaattgattt 45275832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 337
Target Start/End: Original strand, 2071665 - 2071723
Alignment:
Q  279 gttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacat 337  Q
    |||||||||||| |||  ||||||||  |||||||| |||||||||||||| |||||||    
T  2071665 gttgtttggataatttgaatcaaaatagcttttgaaagtataattaccaaattagacat 2071723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 331
Target Start/End: Complemental strand, 35615722 - 35615668
Alignment:
Q  277 ttgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 331  Q
    |||||||||||||||||| | ||||||||  ||||||||| |||||||| |||||    
T  35615722 ttgttgtttggatagtttggctcaaaattgattttgaatgcataattacgaaaat 35615668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 44240811 - 44240773
Alignment:
Q  167 aattgattctgacagaattgattctgaaagaattgattt 205  Q
    |||||||||||| |||||||||||||| |||||||||||    
T  44240811 aattgattctgatagaattgattctgagagaattgattt 44240773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 31246273 - 31246338
Alignment:
Q  141 tgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgatttt 206  Q
    |||||||||||||||| ||||   | |||||||| |||||||||||||| ||  ||||||||||||    
T  31246273 tgtgtgtttggttctgcggtggagataattgattttgacagaattgattttgttagaattgatttt 31246338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 331
Target Start/End: Original strand, 32606549 - 32606602
Alignment:
Q  278 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 331  Q
    ||||||||||||||||| ||| |||||| |||||| || | |||||||||||||    
T  32606549 tgttgtttggatagtttggatgaaaattgcttttgcatatctaattaccaaaat 32606602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 36820938 - 36820979
Alignment:
Q  165 agaattgattctgacagaattgattctgaaagaattgatttt 206  Q
    |||||||||||||| |||| ||||||||| ||||||||||||    
T  36820938 agaattgattctgatagaactgattctgacagaattgatttt 36820979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 331
Target Start/End: Original strand, 41289155 - 41289208
Alignment:
Q  278 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 331  Q
    |||||||||||||||||  |||||||||  ||||||||| | ||||||||||||    
T  41289155 tgttgtttggatagtttgaatcaaaattgattttgaatgcaaaattaccaaaat 41289208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 308959 - 308919
Alignment:
Q  195 agaattgattttgacagaattgactctgacagaattgattt 235  Q
    |||||||||| |||||||||||| ||||| |||||||||||    
T  308959 agaattgattctgacagaattgattctgaaagaattgattt 308919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 330
Target Start/End: Complemental strand, 15206708 - 15206656
Alignment:
Q  278 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaa 330  Q
    ||||||||||||||||| |  |||||||  ||||||||| |||||||||||||    
T  15206708 tgttgtttggatagtttggcccaaaattgattttgaatgcataattaccaaaa 15206656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 330
Target Start/End: Original strand, 24297688 - 24297740
Alignment:
Q  278 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaa 330  Q
    |||||||||||||||||  |||||||||  ||||  |||||||||||||||||    
T  24297688 tgttgtttggatagtttgaatcaaaattgattttacatgtataattaccaaaa 24297740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 325
Target Start/End: Original strand, 37458403 - 37458447
Alignment:
Q  281 tgtttggatagttttgatcaaaattacttttgaatgtataattac 325  Q
    ||||||||||||||  |||||||||  ||||||||||||||||||    
T  37458403 tgtttggatagtttgaatcaaaattgattttgaatgtataattac 37458447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 41289040 - 41289080
Alignment:
Q  195 agaattgattttgacagaattgactctgacagaattgattt 235  Q
    ||||||||||||||||||||||| | ||| |||||||||||    
T  41289040 agaattgattttgacagaattgagtttgagagaattgattt 41289080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 218; Significance: 1e-119; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 31011929 - 31012150
Alignment:
Q  138 atgtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttat 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  31011929 atgtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgattctgacagaattgatttat 31012028  T
Q  238 gtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacat 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31012029 gtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacat 31012128  T
Q  338 agttaaatacaaataaatagaa 359  Q
    ||||||||||||||||||||||    
T  31012129 agttaaatacaaataaatagaa 31012150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 140 - 359
Target Start/End: Original strand, 25340912 - 25341131
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgt 239  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25340912 gtgtgtgtttggttctgaggtgtgtagaattaattctgacagaattgattctgaaagaattgattttgacagaattgattctgacagaattgatttatgt 25341011  T
Q  240 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25341012 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 25341111  T
Q  340 ttaaatacaaataaatagaa 359  Q
    |||||||||||||| |||||    
T  25341112 ttaaatacaaataactagaa 25341131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 180 - 355
Target Start/End: Original strand, 25191239 - 25191414
Alignment:
Q  180 agaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattg 279  Q
    ||||||||||||||||||||||||||||| | |||||| | ||| |||| | |||||||||||||| |||||||| ||||||||||||||| ||||| ||    
T  25191239 agaattgattctgaaagaattgattttgatataattgattttgagagaacttatttatgtttggatacaataatgtagaattgattaaacaaaatgaatg 25191338  T
Q  280 ttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| |||||  |||||| |||||||||||||||    
T  25191339 ttgtttggatagttttgatcaaaattgcttttaaatgtataattactaaaatgcacatagctaaatacaaataaat 25191414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 167 - 331
Target Start/End: Original strand, 25472137 - 25472301
Alignment:
Q  167 aattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgatta 266  Q
    |||||||||||| |||||||||| ||| ||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||| |||||||||    
T  25472137 aattgattctgatagaattgattttgatagaattgattttgacagaattgattttgagagaattgatttatgtttggatacaataatgcataattgatta 25472236  T
Q  267 aacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 331  Q
    |||| | ||| |||||||||||||||||| ||||||||| ||||||||| ||||||||| |||||    
T  25472237 aacaaactgaatgttgtttggatagtttttatcaaaattgcttttgaatatataattactaaaat 25472301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 164 - 355
Target Start/End: Original strand, 298031 - 298221
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattga 263  Q
    ||||||||||| | | |||||||||| ||| |||||||||| |||||||||||| | | | ||||||||||||||||||||| ||| ||||  |||||||    
T  298031 tagaattgattataaaagaattgattatgatagaattgattctgacagaattgatttt-agagaattgatttatgtttggatacaaaaatgtggaattga 298129  T
Q  264 ttaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    ||||||||||||  |||||||| ||||||||||||||||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||    
T  298130 ttaaacagaatggatgttgtttagatagttttgatcaaaattgcttttgaatgtataattactaaaatggacatagctaaatacaaataaat 298221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 180 - 351
Target Start/End: Complemental strand, 12910632 - 12910462
Alignment:
Q  180 agaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattg 279  Q
    |||||||||||||| | |||||||| |||||||||||| ||||| |||||||||||||||||||||  ||||||||||||||||||||||| | ||| ||    
T  12910632 agaattgattctgatataattgattctgacagaattgattctgagagaattgatttatgtttggatataataatgcagaattgattaaacaaactgaatg 12910533  T
Q  280 ttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaat 351  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||| |||||| ||||    
T  12910532 ttgtttggatagtttt-atcaaaattgcttttgaatgtataattactaaaatggacatagctaaatagaaat 12910462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 180 - 358
Target Start/End: Complemental strand, 32451474 - 32451295
Alignment:
Q  180 agaattgattctgaaagaattgattttgacagaattgactct-gacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgatt 278  Q
    |||||||||||||| |||||||||| | ||| |||||| | | || ||||||||||||||||| ||| |||||||| | ||||||||||||| ||||| |    
T  32451474 agaattgattctgatagaattgattataacataattgatttttgagagaattgatttatgtttcgatacaataatgtaaaattgattaaacataatgaat 32451375  T
Q  279 gttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaataga 358  Q
    |||||||  |||||||||||||||||| ||||||||||||||||||| ||||| ||||| ||||||||||||||||||||    
T  32451374 gttgtttaaatagttttgatcaaaattgcttttgaatgtataattactaaaatggacatggttaaatacaaataaataga 32451295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 167 - 345
Target Start/End: Original strand, 26827128 - 26827306
Alignment:
Q  167 aattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgatta 266  Q
    ||||||||||||||||||||||| ||| | |||||||| ||||| |||||| | ||| |||||| |||||||||||||| ||||| ||||||||||||||    
T  26827128 aattgattctgacagaattgattatgataaaattgattatgacataattgattttgagagaatttatttatgtttggatacaatattgcagaattgatta 26827227  T
Q  267 aacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaat 345  Q
    |||| | |||  ||||||||||||||||| ||||||||| |||||||||||| |||||| ||||| ||||||| |||||    
T  26827228 aacaaattgaaagttgtttggatagtttttatcaaaattgcttttgaatgtacaattactaaaatggacatagctaaat 26827306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 180 - 341
Target Start/End: Original strand, 47085219 - 47085380
Alignment:
Q  180 agaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattg 279  Q
    |||||||||||||| | |||||||| ||||| |||||| | ||| ||||||||||||||||||||| |||||||||| ||||||||||| ||| ||   |    
T  47085219 agaattgattctgataaaattgattatgacataattgattttgagagaattgatttatgtttggatacaataatgcaaaattgattaaatagagtggagg 47085318  T
Q  280 ttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagtt 341  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||    
T  47085319 ttgtttggatagttttgatcaaaattgcttttgaatgtataattactaaaatggacatagtt 47085380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 195 - 355
Target Start/End: Complemental strand, 26827075 - 26826915
Alignment:
Q  195 agaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 294  Q
    |||||||||| ||||| |||||| | ||| ||||||| ||||||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||    
T  26827075 agaattgattctgacaaaattgattttgagagaattggtttatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagttt 26826976  T
Q  295 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    | ||||||||| ||||||||||||||||||| ||||| ||||||| ||||| ||| |||||    
T  26826975 ttatcaaaattgcttttgaatgtataattactaaaatggacatagctaaattcaagtaaat 26826915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 195 - 355
Target Start/End: Complemental strand, 4036042 - 4035882
Alignment:
Q  195 agaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 294  Q
    |||||||||| | ||  |||||| | ||| ||||||||||||||||||||| |||||||| ||||||||||||||| | | | |||||||||||||||||    
T  4036042 agaattgattctaacgtaattgattttgagagaattgatttatgtttggatacaataatgtagaattgattaaacaaactaaatgttgtttggatagttt 4035943  T
Q  295 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    | ||||||||| ||||||||||||||||||| ||||||||||||| |||||| ||||||||    
T  4035942 taatcaaaattgcttttgaatgtataattactaaaatagacatagctaaatataaataaat 4035882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 182 - 355
Target Start/End: Original strand, 43664227 - 43664400
Alignment:
Q  182 aattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgtt 281  Q
    |||||||||||| | |||||||||||| | |||||| | ||||| |||| |||||||||||||| |||||||||||||||| ||||||| | ||| | ||    
T  43664227 aattgattctgagataattgattttgataaaattgattatgacataattaatttatgtttggatacaataatgcagaattgtttaaacaaactgaatatt 43664326  T
Q  282 gtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
     ||||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||| ||||| ||| |||||    
T  43664327 atttggatagtttttatcaaaattgcttttgaatgtataattactaaaatggacatagctaaattcaagtaaat 43664400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 195 - 355
Target Start/End: Complemental strand, 15000576 - 15000416
Alignment:
Q  195 agaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 294  Q
    |||||||||| |||||||||||| | ||| | |||||||||||||||| ||  ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  15000576 agaattgattctgacagaattgattttgagataattgatttatgtttgaataaaataatgcagaattgattaaacaaactgaatgttgtttggatagttt 15000477  T
Q  295 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    | | ||||||| ||||||||||||||||||| ||| ||||||||| ||||| ||| |||||    
T  15000476 ttaacaaaattgcttttgaatgtataattactaaactagacatagctaaattcaagtaaat 15000416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 167 - 355
Target Start/End: Original strand, 30139194 - 30139382
Alignment:
Q  167 aattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgatta 266  Q
    |||||||||| | || ||||||||||| |||||||||| |||||||||||| | | | | ||||||||||||||||||| ||||||| || |||||||||    
T  30139194 aattgattctaatagtattgattctgatagaattgattctgacagaattgattttcagataattgatttatgtttggatacaataattcataattgatta 30139293  T
Q  267 aacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||| | ||| ||| ||| |||||||||| |||||||||  |||||||||||||||||| ||||| ||||||| ||||| ||| |||||    
T  30139294 aacaaactgaatgtcgttcggatagtttttatcaaaattgattttgaatgtataattactaaaatggacatagctaaattcaagtaaat 30139382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 192 - 355
Target Start/End: Original strand, 1999615 - 1999778
Alignment:
Q  192 gaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatag 291  Q
    |||| |||||||| ||||| |||||| ||| | |||||||||||||||||  |  |||||||| ||||||||||||| ||||| | ||||||||| ||||    
T  1999615 gaaataattgattctgacataattgattcttatagaattgatttatgtttaaacacaataatgtagaattgattaaatagaataaatgttgtttgaatag 1999714  T
Q  292 ttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    ||||||||||| || ||||||||||||||||||| ||||| ||||||| |||||||||||||||    
T  1999715 ttttgatcaaacttgcttttgaatgtataattactaaaatggacatagctaaatacaaataaat 1999778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 167 - 305
Target Start/End: Complemental strand, 37371395 - 37371257
Alignment:
Q  167 aattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgatta 266  Q
    |||||||||| | |||||||||| ||| |||||||||| |||| ||||||| | ||| ||||||||||||||||||||| ||||||||||||||||||||    
T  37371395 aattgattctaatagaattgattttgatagaattgattctgacggaattgattttgagagaattgatttatgtttggatacaataatgcagaattgatta 37371296  T
Q  267 aacagaatgattgttgtttggatagttttgatcaaaatt 305  Q
    |||| | ||| |||||||||||||||||| |||||||||    
T  37371295 aacaaagtgaatgttgtttggatagtttttatcaaaatt 37371257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 180 - 353
Target Start/End: Complemental strand, 41065478 - 41065305
Alignment:
Q  180 agaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattg 279  Q
    |||||||||| ||| ||||||||||    ||||||||| | | | | |||||||||||||||| || | |||| | ||||||||||||| ||||||| ||    
T  41065478 agaattgattatgacagaattgattccatcagaattgattttaagataattgatttatgtttgaatacgataacgtagaattgattaaagagaatgaatg 41065379  T
Q  280 ttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataa 353  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||| |||||| ||||||    
T  41065378 ttgtttggatagttttgatcaaaattgcttttgaatgtataattactaaaatggacatagctaaataaaaataa 41065305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 227 - 354
Target Start/End: Complemental strand, 39857644 - 39857517
Alignment:
Q  227 aattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattacc 326  Q
    ||||||||||||||||||| |||||| | ||||| ||||||||| ||||| ||| |||||||||||||||||||||||| |||||||||||||||||||     
T  39857644 aattgatttatgtttggatacaataacgtagaatcgattaaacaaaatgaatgtcgtttggatagttttgatcaaaattgcttttgaatgtataattact 39857545  T
Q  327 aaaatagacatagttaaatacaaataaa 354  Q
    ||||| ||||||| |||||| |||||||    
T  39857544 aaaatggacatagctaaataaaaataaa 39857517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 356 - 433
Target Start/End: Original strand, 31012379 - 31012456
Alignment:
Q  356 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31012379 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 31012456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 221 - 355
Target Start/End: Original strand, 39957925 - 39958059
Alignment:
Q  221 tgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtata 320  Q
    ||||||| ||||||||||||||||| |||||||| ||||||||||||||| | | | ||| ||||||||||||||||||||||||  |||||||||||||    
T  39957925 tgacagagttgatttatgtttggatacaataatgtagaattgattaaacaaactaaatgtcgtttggatagttttgatcaaaattgtttttgaatgtata 39958024  T
Q  321 attaccaaaatagacatagttaaatacaaataaat 355  Q
    ||||| |||||  |||||| |||||| ||||||||    
T  39958025 attactaaaattaacatagctaaataaaaataaat 39958059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 212 - 346
Target Start/End: Complemental strand, 40233983 - 40233849
Alignment:
Q  212 aattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattactttt 311  Q
    |||||| | ||| ||||||||||||||||| ||| |||||| | | |||||||||||| |||||| ||||||||||||||||||||||||||||| ||||    
T  40233983 aattgattttgagagaattgatttatgtttagatacaataacgtataattgattaaacggaatgaatgttgtttggatagttttgatcaaaattattttt 40233884  T
Q  312 gaatgtataattaccaaaatagacatagttaaata 346  Q
    |||||||| |||||  |||| ||||||||||||||    
T  40233883 gaatgtatgattacttaaatggacatagttaaata 40233849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 356 - 433
Target Start/End: Original strand, 25341421 - 25341498
Alignment:
Q  356 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25341421 agaagggttagaaaaattaatgagggcaggaatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 25341498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 164 - 339
Target Start/End: Complemental strand, 30825889 - 30825715
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattga 263  Q
    |||||||||||||| || |||||||| ||| | |||||||| ||||| |||| | | | | |||| |||||| ||||||||| |||||||||||||||||    
T  30825889 tagaattgattctggcataattgattttgataaaattgattctgacaaaattaattttaagagaaatgatttctgtttggatacaataatgcagaattga 30825790  T
Q  264 ttaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 339  Q
    |||||||   ||| |||| |||||||| |||| ||||||||| ||||||||||||||| ||| |||||||||||||    
T  30825789 ttaaacaatctgaatgttatttggataatttttatcaaaattgcttttgaatgtataa-tactaaaatagacatag 30825715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 258 - 355
Target Start/End: Complemental strand, 11342052 - 11341955
Alignment:
Q  258 aattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||||||| | || ||||| || |||||||||  ||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||    
T  11342052 aattgatttagcataatgaatgatgtttggatgattttgatcaaaattgtttttgaatgtataattactaaaatagacatagttaaatacaaataaat 11341955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 228 - 305
Target Start/End: Complemental strand, 45203178 - 45203101
Alignment:
Q  228 attgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaatt 305  Q
    |||||||||||||| ||| |||||||||||||||||||||||  | ||| ||||||||||||||||||||||||||||    
T  45203178 attgatttatgtttagatacaataatgcagaattgattaaaccaattgaatgttgtttggatagttttgatcaaaatt 45203101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 26169349 - 26169459
Alignment:
Q  225 agaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataatta 324  Q
    ||||||||||||||||||||  | |||||| |  |||||||||||| ||||   | |||||| |||||||||||||||||| ||||||||||||||||||    
T  26169349 agaattgatttatgtttggagacgataatgtatgattgattaaacataatg---gatgtttgaatagttttgatcaaaattgcttttgaatgtataatta 26169445  T
Q  325 ccaaaatagacata 338  Q
    | ||||| ||||||    
T  26169446 ctaaaatggacata 26169459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 12910615 - 12910577
Alignment:
Q  167 aattgattctgacagaattgattctgaaagaattgattt 205  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  12910615 aattgattctgacagaattgattctgagagaattgattt 12910577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 41625599 - 41625649
Alignment:
Q  280 ttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaa 330  Q
    ||||||||||||||  |||||||||| |||||||| |||||||||||||||    
T  41625599 ttgtttggatagttgagatcaaaattgcttttgaaggtataattaccaaaa 41625649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 331
Target Start/End: Complemental strand, 2839314 - 2839263
Alignment:
Q  280 ttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 331  Q
    ||||||||||| |||   ||||||||| ||||||||||||||||||||||||    
T  2839314 ttgtttggatactttgagtcaaaattatttttgaatgtataattaccaaaat 2839263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 39634109 - 39634176
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttg 207  Q
    ||||||||||||||||| ||||   ||||||||||  ||||||||||||| ||  |||||||||||||    
T  39634109 gtgtgtgtttggttctgcggtggagagaattgatttggacagaattgattttgttagaattgattttg 39634176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 331
Target Start/End: Original strand, 39634248 - 39634302
Alignment:
Q  277 ttgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 331  Q
    ||||||||||||||  || ||||||||||  ||||||||| ||||||||||||||    
T  39634248 ttgttgtttggataacttggatcaaaattgattttgaatgcataattaccaaaat 39634302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 140 - 206
Target Start/End: Original strand, 42752135 - 42752201
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgatttt 206  Q
    ||||||||||||||||| ||||   | |||||||| |||||||||||||| ||  ||||||||||||    
T  42752135 gtgtgtgtttggttctgcggtggagataattgattttgacagaattgattttgttagaattgatttt 42752201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 241
Target Start/End: Original strand, 47157666 - 47157712
Alignment:
Q  195 agaattgattttgacagaattgactctgacagaattgatttatgttt 241  Q
    |||||||||| ||| |||||||| |||||| ||||||||||||||||    
T  47157666 agaattgattctgagagaattgattctgacggaattgatttatgttt 47157712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 15000577 - 15000536
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattt 205  Q
    |||||||||||||||||||||||||| ||| | |||||||||    
T  15000577 tagaattgattctgacagaattgattttgagataattgattt 15000536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 25472164 - 25472205
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattt 205  Q
    ||||||||||| |||||||||||||| ||| |||||||||||    
T  25472164 tagaattgattttgacagaattgattttgagagaattgattt 25472205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 37371368 - 37371327
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattt 205  Q
    |||||||||||||||| ||||||||| ||| |||||||||||    
T  37371368 tagaattgattctgacggaattgattttgagagaattgattt 37371327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 331
Target Start/End: Original strand, 40903251 - 40903304
Alignment:
Q  278 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 331  Q
    ||||||||||||||||   |||||||||  ||||| ||||||||||||||||||    
T  40903251 tgttgtttggatagttcaaatcaaaattgattttggatgtataattaccaaaat 40903304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 47157665 - 47157706
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattt 205  Q
    ||||||||||||||| ||||||||||||||  ||||||||||    
T  47157665 tagaattgattctgagagaattgattctgacggaattgattt 47157706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 341
Target Start/End: Complemental strand, 40725927 - 40725867
Alignment:
Q  281 tgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagtt 341  Q
    |||||||||  ||||||||||||||  |||||||||||||||||  |||||  ||||||||    
T  40725927 tgtttggattattttgatcaaaattgtttttgaatgtataattattaaaatgtacatagtt 40725867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 431
Target Start/End: Complemental strand, 41064717 - 41064685
Alignment:
Q  399 gaattgagggtgtagaattgattctaggaaagt 431  Q
    ||||||||||||||||||||||||||| |||||    
T  41064717 gaattgagggtgtagaattgattctagaaaagt 41064685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 216; Significance: 1e-118; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 140 - 359
Target Start/End: Complemental strand, 30019981 - 30019762
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgt 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  30019981 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgattctgacagaattgatttatgt 30019882  T
Q  240 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30019881 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 30019782  T
Q  340 ttaaatacaaataaatagaa 359  Q
    ||||||||||||||||||||    
T  30019781 ttaaatacaaataaatagaa 30019762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 182 - 355
Target Start/End: Complemental strand, 27825713 - 27825541
Alignment:
Q  182 aattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgtt 281  Q
    |||||||||||| ||||||||| | |||| |||||| | ||| ||||||||||||||||||||  | |||||  ||||||||||||| ||||||| ||||    
T  27825713 aattgattctgatagaattgatct-gacataattgattttgagagaattgatttatgtttggacacgataatatagaattgattaaatagaatgaatgtt 27825615  T
Q  282 gtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||||||||||||||||||||||||||||| ||||||||||||  ||||| ||||||| |||||||||||||||    
T  27825614 gtttggatagttttgatcaaaattacttttaaatgtataattattaaaatggacatagctaaatacaaataaat 27825541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 182 - 345
Target Start/End: Complemental strand, 10683884 - 10683721
Alignment:
Q  182 aattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgtt 281  Q
    |||||||| ||| | |||||||| |||||||||||| | ||| ||||||||||||||| | ||||||||||||||||||| |||||||| | ||| ||||    
T  10683884 aattgattttgatataattgattctgacagaattgattttgagagaattgatttatgtctcgatgcaataatgcagaattaattaaacaaactgaatgtt 10683785  T
Q  282 gtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaat 345  Q
    |||||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||| |||||    
T  10683784 gtttggatagtttttatcaaaatttcttttgaatgtataattactaaaatggacatagctaaat 10683721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 32409457 - 32409328
Alignment:
Q  1 agaacaacatatcagtaccattgggtccacgttctatttatggttttttgattggttgaaatggaacaacgtttagaacactcacaccaataatttgttt 100  Q
    |||||||||||||| | ||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  32409457 agaacaacatatcactgccattgggtccacgttctatttat-----------tggttgaaatggaacaacgtttagaacactcacaccaatcatttgttt 32409369  T
Q  101 atagagttggtgttcagatattgaatgataggagttgatgt 141  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  32409368 atagagttggtgttcagatattgaatgataggagttgatgt 32409328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 210 - 351
Target Start/End: Original strand, 21515110 - 21515250
Alignment:
Q  210 agaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattactt 309  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||| ||||||||| |||    
T  21515110 agaattgattctgacagaattgatttatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagtttt-atcaaaattgctt 21515208  T
Q  310 ttgaatgtataattaccaaaatagacatagttaaatacaaat 351  Q
    |||||||||||||||| || || ||||||| |||||| ||||    
T  21515209 ttgaatgtataattactaatatggacatagctaaatagaaat 21515250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 164 - 355
Target Start/End: Original strand, 31745373 - 31745564
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattga 263  Q
    |||||||||||||||||||||||||| ||| ||||||||||    || |||||  | ||| |  ||| |||||||||||||| | |||| | | ||||||    
T  31745373 tagaattgattctgacagaattgattatgatagaattgattgcatcataattggttttgagatgatttatttatgtttggatacgataacgtataattga 31745472  T
Q  264 ttaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    ||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||| |||||| ||||||||    
T  31745473 ttaaacagaataaatgttgtttggatagttttgatcaaaattgcttttgaatgtataattactaaaatggacatagctaaataaaaataaat 31745564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 182 - 354
Target Start/End: Original strand, 20837891 - 20838063
Alignment:
Q  182 aattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgtt 281  Q
    |||||||||||| |||||||||| | |||||||||| | ||| | ||||||||||||||  ||| |||||||||| ||||||||||| | | ||| ||||    
T  20837891 aattgattctgatagaattgattcttacagaattgattttgaaaaaattgatttatgttatgatacaataatgcataattgattaaataaattgaatgtt 20837990  T
Q  282 gtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaa 354  Q
    ||||| ||| |||||||||||||| ||||||||  ||||||||| ||||| ||||||||||||||||||||||    
T  20837991 gtttgaataattttgatcaaaattgcttttgaacatataattactaaaatggacatagttaaatacaaataaa 20838063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 356 - 433
Target Start/End: Complemental strand, 30019002 - 30018925
Alignment:
Q  356 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30019002 agaagggttagaaaaattaatgaggacagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 30018925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 256 - 355
Target Start/End: Complemental strand, 4147473 - 4147374
Alignment:
Q  256 agaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||  |||||| ||||||||    
T  4147473 agaattgattaaacagaatgaatgttgtttggatagttttgatcaaaattgctcttgaatgtataattactaaaatagacataactaaataaaaataaat 4147374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 225 - 341
Target Start/End: Complemental strand, 921722 - 921607
Alignment:
Q  225 agaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataatta 324  Q
    ||||||||||||||||||||| |||||| | || |||||||||||||||||  |||||||||||||| |||||||||||||| |||||||||||||||||    
T  921722 agaattgatttatgtttggatacaataaagtaggattgattaaacagaatggatgttgtttggatag-tttgatcaaaattatttttgaatgtataatta 921624  T
Q  325 ccaaaatagacatagtt 341  Q
      ||||| || ||||||    
T  921623 ttaaaatggatatagtt 921607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 4147534 - 4147494
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgatt 204  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  4147534 tagaattgattctgacagaattgattctgatagaattgatt 4147494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 15151462 - 15151529
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttg 207  Q
    ||||||||||||||||| |||| |||||||||||| ||| |||||||| | |||  ||||||||||||    
T  15151462 gtgtgtgtttggttctgcggtgagtagaattgattttgatagaattgagtttgagtgaattgattttg 15151529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 278 - 329
Target Start/End: Original strand, 29409348 - 29409399
Alignment:
Q  278 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaa 329  Q
    |||||||||||||||||  |||||||||| ||||||||||||||| ||||||    
T  29409348 tgttgtttggatagtttgaatcaaaattaattttgaatgtataatgaccaaa 29409399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 29682169 - 29682119
Alignment:
Q  280 ttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaa 330  Q
    |||||||||| |||  ||||||||||||||||||| |||||||||||||||    
T  29682169 ttgtttggatggttgagatcaaaattacttttgaaggtataattaccaaaa 29682119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 140 - 209
Target Start/End: Original strand, 5584006 - 5584075
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgac 209  Q
    ||||||||| ||||||| ||||   |||||||||| ||| |||||||||| ||| |||||||||||||||    
T  5584006 gtgtgtgttaggttctgcggtgacgagaattgattttgatagaattgattttgacagaattgattttgac 5584075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 329
Target Start/End: Complemental strand, 13739210 - 13739159
Alignment:
Q  278 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaa 329  Q
    |||||||||||||||||  |||||||||| ||||||||||| ||| ||||||    
T  13739210 tgttgtttggatagtttgaatcaaaattaattttgaatgtaaaatgaccaaa 13739159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 329
Target Start/End: Complemental strand, 13744710 - 13744659
Alignment:
Q  278 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaa 329  Q
    |||||||||||||||||  |||||||||| ||||||||||| ||| ||||||    
T  13744710 tgttgtttggatagtttgaatcaaaattaattttgaatgtaaaatgaccaaa 13744659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 10683869 - 10683831
Alignment:
Q  167 aattgattctgacagaattgattctgaaagaattgattt 205  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  10683869 aattgattctgacagaattgattttgagagaattgattt 10683831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 16122100 - 16122150
Alignment:
Q  280 ttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaa 330  Q
    ||||||||||||||  |||||||||| |||||||| |||||||||| ||||    
T  16122100 ttgtttggatagttgagatcaaaattgcttttgaaggtataattacaaaaa 16122150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 217
Target Start/End: Original strand, 5584031 - 5584068
Alignment:
Q  180 agaattgattctgaaagaattgattttgacagaattga 217  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  5584031 agaattgattttgatagaattgattttgacagaattga 5584068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 20837903 - 20837944
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattt 205  Q
    ||||||||||||| |||||||||||| ||||| |||||||||    
T  20837903 tagaattgattcttacagaattgattttgaaaaaattgattt 20837944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 331
Target Start/End: Original strand, 21254975 - 21255028
Alignment:
Q  278 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 331  Q
    |||||||| | ||||||  ||||||||| |||||||| ||||||||||||||||    
T  21254975 tgttgtttcggtagtttgaatcaaaattgcttttgaaagtataattaccaaaat 21255028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 5584031 - 5584071
Alignment:
Q  195 agaattgattttgacagaattgactctgacagaattgattt 235  Q
    |||||||||||||| |||||||| | |||||||||||||||    
T  5584031 agaattgattttgatagaattgattttgacagaattgattt 5584071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 26274609 - 26274653
Alignment:
Q  180 agaattgattctgaaagaattgattttgacagaattgactctgac 224  Q
    |||||||||| ||| |||||||||||||||| |||||| ||||||    
T  26274609 agaattgattttgatagaattgattttgacataattgattctgac 26274653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 216; Significance: 1e-118; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 140 - 359
Target Start/End: Original strand, 24035536 - 24035755
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgt 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24035536 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgattctgacagaattgatttatgt 24035635  T
Q  240 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24035636 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 24035735  T
Q  340 ttaaatacaaataaatagaa 359  Q
    ||||||||||||||||||||    
T  24035736 ttaaatacaaataaatagaa 24035755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 140 - 359
Target Start/End: Original strand, 39382354 - 39382573
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgt 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  39382354 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgattctgacagaattgatttatgt 39382453  T
Q  240 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39382454 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 39382553  T
Q  340 ttaaatacaaataaatagaa 359  Q
    ||||||||||||||||||||    
T  39382554 ttaaatacaaataaatagaa 39382573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 140 - 359
Target Start/End: Complemental strand, 49128419 - 49128200
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgt 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  49128419 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgattctgacagaattgatttatgt 49128320  T
Q  240 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49128319 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 49128220  T
Q  340 ttaaatacaaataaatagaa 359  Q
    ||||||||||||||||||||    
T  49128219 ttaaatacaaataaatagaa 49128200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 140 - 359
Target Start/End: Complemental strand, 24247308 - 24247089
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgt 239  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  24247308 gtgtgtgtttggttctgaggtgtgcagaattgattctgacagaattgattctgaaagaattgattttgtcagaattgattctgacagaattgatttatgt 24247209  T
Q  240 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24247208 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 24247109  T
Q  340 ttaaatacaaataaatagaa 359  Q
    ||||||||||||||||||||    
T  24247108 ttaaatacaaataaatagaa 24247089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 164 - 355
Target Start/End: Original strand, 16202501 - 16202692
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattga 263  Q
    |||||||||||||||  ||||||||| ||| |||||||||||||| | |||||| | ||| ||||||||||||||||||||| |||||||| ||||||||    
T  16202501 tagaattgattctgattgaattgattttgatagaattgattttgataaaattgattttgagagaattgatttatgtttggatacaataatgtagaattga 16202600  T
Q  264 ttaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    ||||| | ||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||    
T  16202601 ttaaatataatgaatgttgtttggatagttttgatcaaaattgcttttgaatgtataattactaaaatggacatagctaaatacaaataaat 16202692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 167 - 355
Target Start/End: Complemental strand, 39733547 - 39733359
Alignment:
Q  167 aattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgatta 266  Q
    |||||||| |||||||||||||||||| | | |||||| |||||||||||| | ||| ||||||||||||||||||||| |||||||| |||||||||||    
T  39733547 aattgattatgacagaattgattctgataaacttgattatgacagaattgattttgagagaattgatttatgtttggatacaataatgtagaattgatta 39733448  T
Q  267 aacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||| | ||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  39733447 aacaaactgaatgttgtttggatagttttgatcaaaattaattttgaatgtataattactaaaacggacatagctaaatacaaataaat 39733359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 164 - 345
Target Start/End: Original strand, 22605727 - 22605906
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattga 263  Q
    |||||||||||||||||||||||||| ||| ||||||||||  ||||||||||| | ||| ||||||||||||||||||||| ||||||||||| |||||    
T  22605727 tagaattgattctgacagaattgattttgatagaattgattgggacagaattgattttgagagaattgatttatgtttggatacaataatgcagtattga 22605826  T
Q  264 ttaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaat 345  Q
    ||||||  ||||| |||||||||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||| |||||    
T  22605827 ttaaac--aatgaatgttgtttggatagtttttatcaaaattgcttttgaatgtataattactaaaattgacatagctaaat 22605906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 167 - 355
Target Start/End: Original strand, 28963229 - 28963417
Alignment:
Q  167 aattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgatta 266  Q
    |||||||||| | |||||||||||||| |||||||||| |||||||||||| | ||| ||||||||||||||||| ||| |||||||||| |||||||||    
T  28963229 aattgattctaatagaattgattctgatagaattgattctgacagaattgattttgagagaattgatttatgtttagatacaataatgcaaaattgatta 28963328  T
Q  267 aacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||| | ||| |||||||||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||| ||||| ||| |||||    
T  28963329 aacaaactgaatgttgtttggatagtttttatcaaaattgcttttgaatgtataattactaaaatggacatagctaaattcaagtaaat 28963417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 168 - 355
Target Start/End: Original strand, 29385418 - 29385605
Alignment:
Q  168 attgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaa 267  Q
    ||||||||| | |||||||||||| | ||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||| ||||||||||    
T  29385418 attgattctaatagaattgattctaatagaattgattttgacagaattgattttgaaagaattgatttatgtttggatacaataatgcataattgattaa 29385517  T
Q  268 acagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    ||| | ||| ||||||||||||| |||| ||||||||| ||||||||||||||||||| ||||| ||||||| ||||| ||| |||||    
T  29385518 acaaactgaatgttgtttggataatttttatcaaaattgcttttgaatgtataattactaaaatggacatagctaaattcaagtaaat 29385605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 167 - 355
Target Start/End: Complemental strand, 26459714 - 26459526
Alignment:
Q  167 aattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgatta 266  Q
    ||||||||||  ||||||||||||| | |||||||||| ||||| |||||| | | | ||||||||||||||||||||| |||||||||| |||||||||    
T  26459714 aattgattctagcagaattgattctaatagaattgattctgacataattgattttaagagaattgatttatgtttggatacaataatgcaaaattgatta 26459615  T
Q  267 aacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||| | ||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||  ||||||||| |||||    
T  26459614 aacaaattgaatgttgtttggatagttttgatcaaaattacttttgaaagtataattactaaaatggacataactaaatacaagtaaat 26459526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 164 - 339
Target Start/End: Complemental strand, 56561220 - 56561046
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattga 263  Q
    ||||||||||||||||| |||||||||||| |||||||||| | |||||||||| | ||| ||||||||||||||||||||| |||||| ||||||||||    
T  56561220 tagaattgattctgacataattgattctgatagaattgattctcacagaattgattatgagagaattgatttatgtttggatacaataacgcagaattga 56561121  T
Q  264 ttaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 339  Q
    ||||||| | ||| ||||| |||||||||||| ||||||||| ||||||||||||||||||| ||||| |||||||    
T  56561120 ttaaacaaactgaatgttggttggatagtttt-atcaaaattgcttttgaatgtataattactaaaatggacatag 56561046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 174 - 355
Target Start/End: Complemental strand, 45106501 - 45106320
Alignment:
Q  174 tctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaa 273  Q
    ||||||| |||||||| ||| |||||||||| ||||| |||||| | ||| ||||||||||||||||||||| |||||||||| ||||||||||||| |     
T  45106501 tctgacataattgattttgagagaattgattctgacataattgattttgagagaattgatttatgtttggatacaataatgcaaaattgattaaacaaac 45106402  T
Q  274 tgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    ||| |||||||||||||||||| |||||||||  |||||||||||||||||  ||||||||||||| ||||| ||| |||||    
T  45106401 tgaatgttgtttggatagtttttatcaaaattgattttgaatgtataattaataaaatagacatagctaaattcaagtaaat 45106320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 163 - 355
Target Start/End: Original strand, 5937283 - 5937475
Alignment:
Q  163 gtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattg 262  Q
    ||||||||||| || ||| |||||||| ||| |||||||||| |||||| ||||| | | | ||||||||||||| |||| || ||||||||||||||||    
T  5937283 gtagaattgatactaacataattgattttgatagaattgattatgacagcattgatttttagagaattgatttatatttgaatacaataatgcagaattg 5937382  T
Q  263 attaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||||||| | ||| ||||||||| ||| ||||||||||||||  |||||||||||||||||| ||||  |||||||||||||||||||||||    
T  5937383 attaaacaaactgaatgttgtttgaatatttttgatcaaaattgattttgaatgtataattactaaaacggacatagttaaatacaaataaat 5937475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 180 - 316
Target Start/End: Complemental strand, 48407627 - 48407491
Alignment:
Q  180 agaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattg 279  Q
    |||||||||||||| |||||||||||||| |||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||    
T  48407627 agaattgattctgacagaattgattttgatagaattgattgtgacagaattgatttatgtttggatacaataatgcagaattgattaaacaaaatgaatg 48407528  T
Q  280 ttgtttggatagttttgatcaaaattacttttgaatg 316  Q
    ||||||||||| |||| ||||||||| ||||||||||    
T  48407527 ttgtttggataatttttatcaaaattgcttttgaatg 48407491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 206 - 355
Target Start/End: Original strand, 50523279 - 50523428
Alignment:
Q  206 tgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaatt 305  Q
    |||||||||||| | ||| ||||||||||||||||||||| |||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||    
T  50523279 tgacagaattgattttgagagaattgatttatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagttttgatcaaaatt 50523378  T
Q  306 acttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
      ||||||| |||||||||| ||||| ||||||  |||||||||||||||    
T  50523379 gattttgaaggtataattactaaaatggacatatctaaatacaaataaat 50523428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 167 - 355
Target Start/End: Original strand, 51833430 - 51833618
Alignment:
Q  167 aattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgatta 266  Q
    ||||||||| |||| |||||||||||| | ||||||||    ||||||| | || || |||||||||||||||||| || | |||| | |||||||||||    
T  51833430 aattgattccgacaaaattgattctgataaaattgattccatcagaattaattcggagagaattgatttatgtttgaatacgataacgtagaattgatta 51833529  T
Q  267 aacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| ||||| ||||||| |||||| ||||||||    
T  51833530 aacagaatgaatgttgtttggatagttttgaacaaaattgcttttgaatgtataattactaaaatggacatagctaaataaaaataaat 51833618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 180 - 355
Target Start/End: Original strand, 53663019 - 53663194
Alignment:
Q  180 agaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattg 279  Q
    |||||||||||||| |||||||||| ||||| |||||| | | | ||||||||||||||||||||| |||||||||| ||||||||||||| | ||| ||    
T  53663019 agaattgattctgatagaattgattatgacataattgattttaaaagaattgatttatgtttggatacaataatgcaaaattgattaaacaaactgaatg 53663118  T
Q  280 ttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||||||||||||||| | |||||||  |||||||||||||||||| ||||||||||||  ||||| ||| |||||    
T  53663119 ttgtttggatagtttttaacaaaattgtttttgaatgtataattactaaaatagacataactaaattcaagtaaat 53663194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 164 - 345
Target Start/End: Complemental strand, 38768528 - 38768352
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattga 263  Q
    |||||||||||||||||||||||||| ||| |||||||||| ||||||| |||| | ||| | ||||||||||||| ||||| ||||| |||||||||||    
T  38768528 tagaattgattctgacagaattgattttgatagaattgattgtgacaga-ttgattttgagataattgatttatgtctggatacaatactgcagaattga 38768430  T
Q  264 ttaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaat 345  Q
    ||||||| ||||| |||||||||||||    | ||||||||| ||||||||||||||||||| ||||| ||||||| |||||    
T  38768429 ttaaacaaaatgaatgttgtttggata----ttatcaaaattgcttttgaatgtataattactaaaatggacatagctaaat 38768352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 227 - 355
Target Start/End: Original strand, 30417826 - 30417954
Alignment:
Q  227 aattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattacc 326  Q
    ||||||||||||||| ||| |||||||||||||||||||||||| | ||| |||||||||||||||||| ||||||||| |||||||||||||||||||     
T  30417826 aattgatttatgtttagatacaataatgcagaattgattaaacaaactgaatgttgtttggatagtttttatcaaaattgcttttgaatgtataattact 30417925  T
Q  327 aaaatagacatagttaaatacaaataaat 355  Q
    ||||||||||||  ||||| ||| |||||    
T  30417926 aaaatagacataactaaattcaagtaaat 30417954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 140 - 224
Target Start/End: Original strand, 31430860 - 31430944
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgac 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31430860 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgattctgac 31430944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 356 - 433
Target Start/End: Complemental strand, 18140603 - 18140526
Alignment:
Q  356 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18140603 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 18140526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 356 - 433
Target Start/End: Complemental strand, 24246769 - 24246692
Alignment:
Q  356 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24246769 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 24246692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 356 - 433
Target Start/End: Original strand, 31431012 - 31431089
Alignment:
Q  356 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31431012 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 31431089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 356 - 433
Target Start/End: Original strand, 39382934 - 39383011
Alignment:
Q  356 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39382934 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 39383011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 356 - 433
Target Start/End: Complemental strand, 49127816 - 49127739
Alignment:
Q  356 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49127816 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 49127739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 195 - 356
Target Start/End: Original strand, 53403525 - 53403686
Alignment:
Q  195 agaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 294  Q
    |||||||||| ||||| |||||| | ||| ||||||| ||||||||||||| |||||||||| ||||||||||||| | ||| |||| |||||||| |||    
T  53403525 agaattgattatgacataattgattttgagagaattggtttatgtttggatacaataatgcataattgattaaacaaactgaatgttatttggataattt 53403624  T
Q  295 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaata 356  Q
    | |||||||||  |||||||||||||||||| ||||| ||||| ||||||| ||| ||||||    
T  53403625 ttatcaaaattgattttgaatgtataattactaaaatggacatggttaaattcaagtaaata 53403686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 197 - 353
Target Start/End: Complemental strand, 8510842 - 8510686
Alignment:
Q  197 aattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 296  Q
    ||||| |||||| | |||||| ||||| ||||||||||||||||||||| |||||||||| ||||||| ||| ||||| | |||||||||  || |||||    
T  8510842 aattggttttgatataattgattctgatagaattgatttatgtttggatacaataatgcataattgataaaatagaataaatgttgtttgattaattttg 8510743  T
Q  297 atcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataa 353  Q
    |||||||||  |||||||||||||||||  ||||| || ||||||||||||||||||    
T  8510742 atcaaaattgtttttgaatgtataattattaaaatggatatagttaaatacaaataa 8510686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 356 - 433
Target Start/End: Original strand, 24038038 - 24038115
Alignment:
Q  356 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24038038 agaagggttagaaaaattaatgaggacagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 24038115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 196 - 327
Target Start/End: Complemental strand, 36212921 - 36212790
Alignment:
Q  196 gaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagtttt 295  Q
    ||||||||||||  | |||||| | | ||| |||||||||||||||||||||||||||||| | ||||||||| | ||||  |||||||| |||||||||    
T  36212921 gaattgattttgttataattgagtttaacaaaattgatttatgtttggatgcaataatgcatatttgattaaataaaatgtatgttgtttagatagtttt 36212822  T
Q  296 gatcaaaattacttttgaatgtataattacca 327  Q
    ||| ||||| ||||||||||||||||||||||    
T  36212821 gattaaaatcacttttgaatgtataattacca 36212790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 225 - 355
Target Start/End: Complemental strand, 28912281 - 28912154
Alignment:
Q  225 agaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataatta 324  Q
    |||||| |||||||||||||| ||||||||  ||||||||||||  |||||| |||||||| |||| ||||||||||| || ||||||||||||||||||    
T  28912281 agaatttatttatgtttggatacaataatgtggaattgattaaa--gaatgaatgttgtttagataattttgatcaaa-ttgcttttgaatgtataatta 28912185  T
Q  325 ccaaaatagacatagttaaatacaaataaat 355  Q
    | ||||| |||||| ||||||| ||||||||    
T  28912184 ctaaaatggacataattaaataaaaataaat 28912154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 259 - 355
Target Start/End: Complemental strand, 51677628 - 51677532
Alignment:
Q  259 attgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    ||||||||||| |||||| ||||||||| ||| ||||||||||||||| |||| ||| ||||||||| ||||| |||||||||||||||||||||||    
T  51677628 attgattaaacggaatgagtgttgtttgaatatttttgatcaaaattatttttaaatatataattactaaaatggacatagttaaatacaaataaat 51677532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 167 - 270
Target Start/End: Complemental strand, 49724493 - 49724390
Alignment:
Q  167 aattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgatta 266  Q
    |||||||| ||||| |||||||| ||| |||||||||| ||||| |||||| | ||| ||||||| ||||||||||||| |||||||||| |||||||||    
T  49724493 aattgattatgacataattgattatgatagaattgattatgacataattgattttgagagaattggtttatgtttggatacaataatgcataattgatta 49724394  T
Q  267 aaca 270  Q
    ||||    
T  49724393 aaca 49724390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 209 - 324
Target Start/End: Original strand, 29810004 - 29810118
Alignment:
Q  209 cagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattact 308  Q
    ||||||||| | | ||| |||||||||||||||||||  ||||||||| ||| |||||||| |||||| |||| |||||||||||||||| |||| |  |    
T  29810004 cagaattgagtttaacataattgatttatgtttggataaaataatgcaaaat-gattaaaccgaatgaatgttttttggatagttttgattaaaactgtt 29810102  T
Q  309 tttgaatgtataatta 324  Q
    ||| || |||||||||    
T  29810103 ttttaacgtataatta 29810118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 167 - 237
Target Start/End: Complemental strand, 51677697 - 51677627
Alignment:
Q  167 aattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttat 237  Q
    |||||||||| | |||||||||||||| |||||||||| |||||||||||| | ||| |||||||||||||    
T  51677697 aattgattctaaaagaattgattctgatagaattgattctgacagaattgattttgagagaattgatttat 51677627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 51677684 - 51677632
Alignment:
Q  165 agaattgattctgacagaattgattctgaaagaattgattttgacagaattga 217  Q
    |||||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  51677684 agaattgattctgatagaattgattctgacagaattgattttgagagaattga 51677632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 31430885 - 31430939
Alignment:
Q  180 agaattgattctgaaagaattgattttgacagaattgactctgacagaattgatt 234  Q
    |||||||||||||| |||||||||| ||| |||||||| | ||||||||||||||    
T  31430885 agaattgattctgacagaattgattctgaaagaattgattttgacagaattgatt 31430939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 28963256 - 28963297
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattt 205  Q
    |||||||||||||||||||||||||| ||| |||||||||||    
T  28963256 tagaattgattctgacagaattgattttgagagaattgattt 28963297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 29385444 - 29385485
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattt 205  Q
    ||||||||||| |||||||||||||| |||||||||||||||    
T  29385444 tagaattgattttgacagaattgattttgaaagaattgattt 29385485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 51677670 - 51677629
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattt 205  Q
    |||||||||||||||||||||||||| ||| |||||||||||    
T  51677670 tagaattgattctgacagaattgattttgagagaattgattt 51677629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 4649886 - 4649953
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttg 207  Q
    ||||||||||||||||| |||| |||||||||||| ||| | |||||| | |||  ||||||||||||    
T  4649886 gtgtgtgtttggttctgtggtgagtagaattgattttgataaaattgagtttgagtgaattgattttg 4649953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 276
Target Start/End: Original strand, 29490920 - 29490971
Alignment:
Q  225 agaattgatttatgtttggatgcaataatgcagaattgattaaacagaatga 276  Q
    |||||||||||||||||||||  |||||| || ||||||||||||| |||||    
T  29490920 agaattgatttatgtttggatctaataatacataattgattaaacaaaatga 29490971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 329
Target Start/End: Original strand, 43781615 - 43781666
Alignment:
Q  278 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaa 329  Q
    |||||||||||||||||  |||||||||| ||||||||||| ||| ||||||    
T  43781615 tgttgtttggatagtttgaatcaaaattaattttgaatgtaaaatgaccaaa 43781666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 329
Target Start/End: Complemental strand, 51922929 - 51922878
Alignment:
Q  278 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaa 329  Q
    |||||||||||||||||  |||||||||  ||||||||||||||| ||||||    
T  51922929 tgttgtttggatagtttgaatcaaaattgattttgaatgtataatgaccaaa 51922878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 268
Target Start/End: Original strand, 52056541 - 52056599
Alignment:
Q  210 agaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaa 268  Q
    |||||||| | ||| | |||||||||||||||| ||||||||||||| |||| ||||||    
T  52056541 agaattgattatgatataattgatttatgtttgaatgcaataatgcataattcattaaa 52056599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 140 - 206
Target Start/End: Complemental strand, 54488734 - 54488668
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgatttt 206  Q
    ||||||||||||||||| ||||   | |||||||| |||||||||||||| ||  ||||||||||||    
T  54488734 gtgtgtgtttggttctgcggtggagataattgattttgacagaattgattttgttagaattgatttt 54488668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 25312705 - 25312648
Alignment:
Q  277 ttgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 334  Q
    ||||||||||||||  ||  ||||||||| |||||  |||||||||||||||||||||    
T  25312705 ttgttgtttggatacattgaatcaaaattgcttttagatgtataattaccaaaataga 25312648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 331
Target Start/End: Complemental strand, 38306000 - 38305947
Alignment:
Q  278 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 331  Q
    |||||||||||||  || ||||||||||  ||||||||| ||||||||||||||    
T  38306000 tgttgtttggataacttggatcaaaattgattttgaatgcataattaccaaaat 38305947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 331
Target Start/End: Complemental strand, 41866144 - 41866091
Alignment:
Q  278 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 331  Q
    |||||||||||||||||    |||||||| ||||| ||||||||||||||||||    
T  41866144 tgttgtttggatagtttgtgccaaaattaattttgcatgtataattaccaaaat 41866091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 333
Target Start/End: Complemental strand, 13167511 - 13167459
Alignment:
Q  281 tgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatag 333  Q
    ||||||||||| ||  ||||||||| ||||| |||| ||||||||||||||||    
T  13167511 tgtttggatagattgaatcaaaattgcttttaaatgcataattaccaaaatag 13167459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 330
Target Start/End: Original strand, 20191782 - 20191834
Alignment:
Q  278 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaa 330  Q
    |||||||||||||  ||  |||||||||| |||| ||||||||||||||||||    
T  20191782 tgttgtttggataacttgaatcaaaattaattttaaatgtataattaccaaaa 20191834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 31430885 - 31430925
Alignment:
Q  195 agaattgattttgacagaattgactctgacagaattgattt 235  Q
    |||||||||| |||||||||||| ||||| |||||||||||    
T  31430885 agaattgattctgacagaattgattctgaaagaattgattt 31430925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 45106480 - 45106440
Alignment:
Q  165 agaattgattctgacagaattgattctgaaagaattgattt 205  Q
    |||||||||||||||| |||||||| ||| |||||||||||    
T  45106480 agaattgattctgacataattgattttgagagaattgattt 45106440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 54683517 - 54683453
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgatt 204  Q
    ||||||||||||||||| ||||   | |||||||| ||| |||||||||| |||| |||||||||    
T  54683517 gtgtgtgtttggttctgcggtgaaaaaaattgattttgatagaattgattttgaatgaattgatt 54683453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 214; Significance: 1e-117; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 29541754 - 29541975
Alignment:
Q  138 atgtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttat 237  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  29541754 atgtgtgtgtttggttctgaggtgtgtagaattaattctgacagaattgattctgaaagaattgattttgacagaattgattctgacagaattgatttat 29541853  T
Q  238 gtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacat 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29541854 gtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacat 29541953  T
Q  338 agttaaatacaaataaatagaa 359  Q
    ||||||||||||||||||||||    
T  29541954 agttaaatacaaataaatagaa 29541975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 140 - 359
Target Start/End: Original strand, 3260272 - 3260491
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgt 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3260272 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgattctgacagaattgatttatgt 3260371  T
Q  240 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 339  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3260372 ttggatgcaataatacagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 3260471  T
Q  340 ttaaatacaaataaatagaa 359  Q
    ||||||||||||||||||||    
T  3260472 ttaaatacaaataaatagaa 3260491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 141 - 433
Target Start/End: Complemental strand, 33115382 - 33115108
Alignment:
Q  141 tgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtt 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||               ||||||||    
T  33115382 tgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattga---------------tttatgtt 33115298  T
Q  241 tggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagt 340  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33115297 tggatacaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagt 33115198  T
Q  341 taaatacaaataaatagaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    |||||||||||||||||||   |||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33115197 taaatacaaataaatagaa--atta-ctaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 33115108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 140 - 359
Target Start/End: Complemental strand, 42664138 - 42663919
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgt 239  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  42664138 gtgtgtctttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttgacagaattgattctgacagaattgatttatgt 42664039  T
Q  240 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  42664038 ttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattatttttgaatgtataattaccaaaatagacatag 42663939  T
Q  340 ttaaatacaaataaatagaa 359  Q
    ||||||||||||||||||||    
T  42663938 ttaaatacaaataaatagaa 42663919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 195 - 433
Target Start/End: Complemental strand, 14083200 - 14082965
Alignment:
Q  195 agaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 294  Q
    |||||||||| ||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14083200 agaattgattctgaaagaattgattttgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 14083101  T
Q  295 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaagggttagaaaaattaatgagggcagggatggaatt 394  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||   ||||||||||||||||||||||||||    
T  14083100 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa--atta-ctaaattaatgagggcagggatggaatt 14083004  T
Q  395 aatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14083003 aatagaattgagggtgtagaattgattctaggaaagtaa 14082965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 164 - 355
Target Start/End: Original strand, 33386842 - 33387033
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattga 263  Q
    |||||||||||||||  ||||||||| ||| |||||||||| ||| | |||||| | ||| ||||||| ||||||||||||| |||||||| ||||||||    
T  33386842 tagaattgattctgattgaattgattttgatagaattgattctgatataattgattttgagagaattggtttatgtttggatacaataatgtagaattga 33386941  T
Q  264 ttaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    ||||| ||||||| ||||||||||||||||||||||||||||  |||||||||||||||||| ||||| ||||||| |||||||||||||||    
T  33386942 ttaaatagaatgaatgttgtttggatagttttgatcaaaattgtttttgaatgtataattactaaaatggacatagctaaatacaaataaat 33387033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 164 - 345
Target Start/End: Complemental strand, 37046297 - 37046116
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattga 263  Q
    ||||||||||||||||| |||||||||||  |||||||||| |||||||||||| | | | |||||||||||||||||| || |||||||||||||||||    
T  37046297 tagaattgattctgacataattgattctgttagaattgattctgacagaattgattttaagagaattgatttatgtttgaatacaataatgcagaattga 37046198  T
Q  264 ttaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaat 345  Q
    ||||||| | ||| ||||||||||||  |||||||||||||| ||||||||||||||||||| ||||||||||||| |||||    
T  37046197 ttaaacaaactgaatgttgtttggatgattttgatcaaaattgcttttgaatgtataattactaaaatagacatagctaaat 37046116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 195 - 358
Target Start/End: Original strand, 33082342 - 33082505
Alignment:
Q  195 agaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 294  Q
    |||||||||| ||| |||||||| | ||| |||||||||||||||||| || |||||||| ||||||||||||| ||||||  |||||||||||||||||    
T  33082342 agaattgattctgatagaattgattttgagagaattgatttatgtttgaatacaataatgtagaattgattaaatagaatggatgttgtttggatagttt 33082441  T
Q  295 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaataga 358  Q
    ||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  33082442 tgatcaaaattgcttttgaatgtataattactaaaatggacatagttaaatacaaataaataga 33082505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 182 - 355
Target Start/End: Complemental strand, 31906154 - 31905981
Alignment:
Q  182 aattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgtt 281  Q
    |||||||||||| |||||||||| ||||| |||||| | ||| ||||||||||||||||||||| |||||||||||||||||||||||| | ||| ||||    
T  31906154 aattgattctgatagaattgattatgacataattgattttgagagaattgatttatgtttggatacaataatgcagaattgattaaacaaactgaatgtt 31906055  T
Q  282 gtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||| ||||| ||| |||||    
T  31906054 gtttggatagtttttatcaaaattgcttttgaatgtataattactaaaatggacatagataaattcaagtaaat 31905981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 182 - 355
Target Start/End: Original strand, 41741604 - 41741777
Alignment:
Q  182 aattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgtt 281  Q
    |||||||||||| |||||||||||||| |||||||| | ||| |||||| |||||||||||||| |||||||||||||||||||||||| | ||| ||||    
T  41741604 aattgattctgatagaattgattttgatagaattgattttgaaagaattaatttatgtttggatacaataatgcagaattgattaaacaaactgaatgtt 41741703  T
Q  282 gtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||||||||||||| || |||||| ||||||||||||||||||| ||||| ||||||| ||||| ||| |||||    
T  41741704 gtttggatagtttttattaaaattgcttttgaatgtataattactaaaatggacatagctaaattcaagtaaat 41741777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 195 - 351
Target Start/End: Original strand, 27737954 - 27738110
Alignment:
Q  195 agaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 294  Q
    |||||||||| ||| |||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||    
T  27737954 agaattgattctgatagaattaattctgacagaattgatttatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagttt 27738053  T
Q  295 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaat 351  Q
    | ||||||||| ||||||||||||||||||| ||||| ||||||| |||||| ||||    
T  27738054 ttatcaaaattgcttttgaatgtataattactaaaatggacatagctaaatagaaat 27738110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 164 - 355
Target Start/End: Complemental strand, 4295665 - 4295474
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattga 263  Q
    ||||||||||| |||||||||||||| ||| |||||||||| ||||| |||||| | ||| |||||||||||||||||| || |||||||  | ||||||    
T  4295665 tagaattgattttgacagaattgattttgatagaattgattctgacataattgattttgagagaattgatttatgtttgaatacaataatttaaaattga 4295566  T
Q  264 ttaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    ||||||| | ||| |||||||||||||  |||||||||||||| |||||||||||||||||| ||||| |||| |||||||||||| |||||    
T  4295565 ttaaacaaattgaatgttgtttggatatgtttgatcaaaattatttttgaatgtataattactaaaatggacagagttaaatacaagtaaat 4295474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 164 - 331
Target Start/End: Original strand, 41039516 - 41039683
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattga 263  Q
    |||||||||||||||||||||||||| ||  | |||||||| |||||||||||| | ||| |||| |||||||||||||||| |||||||||||||||||    
T  41039516 tagaattgattctgacagaattgattttgttaaaattgattgtgacagaattgattttgagagaactgatttatgtttggatacaataatgcagaattga 41039615  T
Q  264 ttaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 331  Q
    ||||||  ||||| ||||||||||||||||||  |||||||| ||||||||||| ||||||| |||||    
T  41039616 ttaaacgaaatgaatgttgtttggatagtttttttcaaaattgcttttgaatgtgtaattactaaaat 41039683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 210 - 355
Target Start/End: Complemental strand, 10900821 - 10900676
Alignment:
Q  210 agaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattactt 309  Q
    |||||||| | ||| ||||||||||||||||||||| |||||||||| ||||||||||||| | ||| ||||||||||||| ||||||||||||||| ||    
T  10900821 agaattgattttgagagaattgatttatgtttggatacaataatgcataattgattaaacaaactgaatgttgtttggataattttgatcaaaattaatt 10900722  T
Q  310 ttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||||||||||||||| ||||| ||||||| |||||||||||||||    
T  10900721 ttgaatgtataattactaaaatggacatagctaaatacaaataaat 10900676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 195 - 351
Target Start/End: Complemental strand, 33233148 - 33232993
Alignment:
Q  195 agaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 294  Q
    |||||||||| |||||||||||| | ||| ||||||||||||||||||||| |||||||||||||| ||||||||| | ||| |||||||||||||||||    
T  33233148 agaattgattctgacagaattgattatgagagaattgatttatgtttggatacaataatgcagaatcgattaaacaaactgaatgttgtttggatagttt 33233049  T
Q  295 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaat 351  Q
    | ||||||||| ||||||||||||||||||| ||||| ||||||| |||||| ||||    
T  33233048 t-atcaaaattgcttttgaatgtataattactaaaatggacatagctaaatagaaat 33232993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 180 - 345
Target Start/End: Original strand, 25256219 - 25256384
Alignment:
Q  180 agaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattg 279  Q
    |||||||||| | |||||||||||| ||||| || ||| | ||| ||||||||||||||||||||| |||||||| |||||||||||||| ||||   ||    
T  25256219 agaattgattttaaaagaattgattctgacataaatgattttgagagaattgatttatgtttggatacaataatgtagaattgattaaacggaattgatg 25256318  T
Q  280 ttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaat 345  Q
    |||||| |||||||||||||||||||  |||||||||||||||||| ||||| |||||||||||||    
T  25256319 ttgtttagatagttttgatcaaaattgtttttgaatgtataattactaaaatggacatagttaaat 25256384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 180 - 345
Target Start/End: Original strand, 25320008 - 25320173
Alignment:
Q  180 agaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattg 279  Q
    |||||||||| | |||||||||||| ||||| || ||| | ||| ||||||||||||||||||||| |||||||| |||||||||||||| ||||   ||    
T  25320008 agaattgattttaaaagaattgattctgacataaatgattttgagagaattgatttatgtttggatacaataatgtagaattgattaaacggaattgatg 25320107  T
Q  280 ttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaat 345  Q
    |||||| |||||||||||||||||||  |||||||||||||||||| ||||| |||||||||||||    
T  25320108 ttgtttagatagttttgatcaaaattgtttttgaatgtataattactaaaatggacatagttaaat 25320173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 210 - 351
Target Start/End: Original strand, 7071434 - 7071577
Alignment:
Q  210 agaattgactctgacagaattgatttatgtttggatgcaataatgc--agaattgattaaacagaatgattgttgtttggatagttttgatcaaaattac 307  Q
    |||| ||| ||||||||||||||||||||||||||| |||||||||  | ||||||||||||| | ||| ||||||||||||||||||||||||||||      
T  7071434 agaaatgattctgacagaattgatttatgtttggatacaataatgcgcataattgattaaacaaactgaatgttgtttggatagttttgatcaaaattgt 7071533  T
Q  308 ttttgaatgtataattaccaaaatagacatagttaaatacaaat 351  Q
    |||||||||||||||||||||||| ||||||| |||||| ||||    
T  7071534 ttttgaatgtataattaccaaaatggacataggtaaatagaaat 7071577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 196 - 355
Target Start/End: Original strand, 11017831 - 11017990
Alignment:
Q  196 gaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagtttt 295  Q
    ||||||||| ||||| |||||| | ||| |||||||||||||||||||||  ||||||||||||||||||| ||| | ||| ||||||||||||||||||    
T  11017831 gaattgattctgacataattgattttgatagaattgatttatgtttggatataataatgcagaattgattagacaaactgaatgttgtttggatagtttt 11017930  T
Q  296 gatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
     |||||||||  ||||||||||||  |||| ||||| ||||||||||||| ||| |||||    
T  11017931 catcaaaattgtttttgaatgtatggttactaaaatggacatagttaaattcaagtaaat 11017990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 212 - 355
Target Start/End: Complemental strand, 40980102 - 40979959
Alignment:
Q  212 aattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattactttt 311  Q
    |||||| | ||| |||||||| |||||| ||||| |||||||||| ||||||||||||| | | | ||||||||||||||||||||||||||||  ||||    
T  40980102 aattgattttgagagaattgaattatgtatggatacaataatgcaaaattgattaaacaaattaaatgttgtttggatagttttgatcaaaattgatttt 40980003  T
Q  312 gaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||||||||||||| ||||| ||||||| |||||||||||||||    
T  40980002 gaatgtataattactaaaatggacatagctaaatacaaataaat 40979959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 356 - 433
Target Start/End: Original strand, 3260815 - 3260892
Alignment:
Q  356 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3260815 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 3260892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 356 - 433
Target Start/End: Original strand, 29542418 - 29542495
Alignment:
Q  356 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29542418 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 29542495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 356 - 433
Target Start/End: Complemental strand, 42663585 - 42663508
Alignment:
Q  356 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42663585 agaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaa 42663508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 227 - 355
Target Start/End: Original strand, 8957929 - 8958057
Alignment:
Q  227 aattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattacc 326  Q
    ||||||||||| ||| ||| |||||||||||||||||||||||| | ||| |||||||||||||||||| ||||||||| |||||||||||||||||||     
T  8957929 aattgatttatatttagatacaataatgcagaattgattaaacaaactgaatgttgtttggatagtttttatcaaaattgcttttgaatgtataattact 8958028  T
Q  327 aaaatagacatagttaaatacaaataaat 355  Q
    |||||||| |||| ||||| ||| |||||    
T  8958029 aaaatagatatagctaaattcaagtaaat 8958057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 167 - 355
Target Start/End: Original strand, 53008 - 53196
Alignment:
Q  167 aattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgatta 266  Q
    |||||||| || || |||||||||| | |||||||||| ||||| |||||| | | | | ||||||||||||||||||| | || ||||| | |||| ||    
T  53008 aattgattatggcataattgattctaatagaattgattctgacataattgattttaagataattgatttatgtttggatacgatgatgcacagttgaata 53107  T
Q  267 aacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||| | ||| |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||| ||||||  ||||||||| |||||    
T  53108 aacaaattgaatgttgtttggatggttttgatcaaaattgcttttgaaagtataattactaaaatggacataactaaatacaagtaaat 53196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 256 - 355
Target Start/End: Complemental strand, 2526947 - 2526848
Alignment:
Q  256 agaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||  |||||| ||||||||    
T  2526947 agaattgattaaacagaatgaatgttgtttggatagttttgatcaaaattgctcttgaatgtataattactaaaatagacataactaaataaaaataaat 2526848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 182 - 355
Target Start/End: Original strand, 20069068 - 20069241
Alignment:
Q  182 aattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgtt 281  Q
    |||||||| ||| |||||||||| | ||| |||||| | | | | ||||||||||  ||||||| |||||||||| |||||||||||||   ||| ||||    
T  20069068 aattgattatgacagaattgattctaacataattgattttaagataattgatttacatttggatacaataatgcaaaattgattaaacacgttgaatgtt 20069167  T
Q  282 gtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    ||||||||||||||||||||||||  |||||||||||||| ||| ||||  |||||| ||||||||| ||||||    
T  20069168 gtttggatagttttgatcaaaattgtttttgaatgtataagtactaaaaccgacataattaaatacatataaat 20069241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 225 - 356
Target Start/End: Original strand, 39236056 - 39236186
Alignment:
Q  225 agaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataatta 324  Q
    |||||||||||||||||| ||  ||||||||||||||||||||||| | ||| ||||||||||||| |||| || |||||| ||||||||||||||||||    
T  39236056 agaattgatttatgtttgaatataataatgcagaattgattaaacaaactgaatgttgtttggataatttt-attaaaattgcttttgaatgtataatta 39236154  T
Q  325 ccaaaatagacatagttaaatacaaataaata 356  Q
    | ||||| ||||||| |||||| |||| ||||    
T  39236155 ctaaaatggacatagctaaatagaaattaata 39236186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 19357164 - 19357056
Alignment:
Q  197 aattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 296  Q
    |||||||||| | |||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||| | ||| ||||||||| ||||||||     
T  19357164 aattgattttaatagaattgattctgacataattgatttatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttgtatagttttt 19357065  T
Q  297 atcaaaatt 305  Q
    || ||||||    
T  19357064 atgaaaatt 19357056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 14083225 - 14083160
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattt 205  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||    
T  14083225 gtgtgtgtttggttctgaggtgtgtagaattgattctgaaagaattgattttgacagaattgattt 14083160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 2527008 - 2526968
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgatt 204  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  2527008 tagaattgattctgacagaattgattctgatagaattgatt 2526968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 35847844 - 35847911
Alignment:
Q  140 gtgtgtgtttggttctgaggtgtgtagaattgattctgacagaattgattctgaaagaattgattttg 207  Q
    ||||||||||||||||| |||| |||||||||||| ||| |||||||| | |||  ||||||||||||    
T  35847844 gtgtgtgtttggttctgcggtgagtagaattgattttgatagaattgagtttgagtgaattgattttg 35847911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 270
Target Start/End: Original strand, 29367021 - 29367110
Alignment:
Q  180 agaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaaca 270  Q
    ||||||||||||   | |||||||| | ||| |||||| | ||| ||||||||||||||||||||| |||||||| ||| |||||||||||    
T  29367021 agaattgattctctcataattgattataacataattgatt-tgagagaattgatttatgtttggatacaataatgtagatttgattaaaca 29367110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 278 - 331
Target Start/End: Complemental strand, 7178796 - 7178743
Alignment:
Q  278 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 331  Q
    |||||||||| ||||||  ||||||||| |||||||| ||||||||||||||||    
T  7178796 tgttgtttgggtagtttgaatcaaaattgcttttgaaagtataattaccaaaat 7178743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 278 - 330
Target Start/End: Complemental strand, 19784831 - 19784778
Alignment:
Q  278 tgttgtttggatagttttgatcaaaattacttttgaatgtat-aattaccaaaa 330  Q
    |||||||||||||||||||||||||||| ||||| ||||| | |||||||||||    
T  19784831 tgttgtttggatagttttgatcaaaattgcttttaaatgtgtaaattaccaaaa 19784778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 33233149 - 33233108
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattt 205  Q
    |||||||||||||||||||||||||| ||| |||||||||||    
T  33233149 tagaattgattctgacagaattgattatgagagaattgattt 33233108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 331
Target Start/End: Original strand, 4569176 - 4569228
Alignment:
Q  279 gttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 331  Q
    |||||||||||| ||||||| ||||||  ||||||||| ||||||||||||||    
T  4569176 gttgtttggataattttgataaaaattgattttgaatgcataattaccaaaat 4569228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 329
Target Start/End: Complemental strand, 32454555 - 32454504
Alignment:
Q  278 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaa 329  Q
    |||||||||||||||||  |||||||||| ||||||||||| ||| ||||||    
T  32454555 tgttgtttggatagtttgaatcaaaattaattttgaatgtaaaatgaccaaa 32454504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 331
Target Start/End: Original strand, 3747684 - 3747737
Alignment:
Q  278 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 331  Q
    |||||||||||||||||| |||||||||  ||||  ||||| ||||||||||||    
T  3747684 tgttgtttggatagttttaatcaaaattgattttacatgtaaaattaccaaaat 3747737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 27737953 - 27737994
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattt 205  Q
    ||||||||||||||| |||||| ||||||| |||||||||||    
T  27737953 tagaattgattctgatagaattaattctgacagaattgattt 27737994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 33082341 - 33082382
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattt 205  Q
    ||||||||||||||| |||||||||| ||| |||||||||||    
T  33082341 tagaattgattctgatagaattgattttgagagaattgattt 33082382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 322
Target Start/End: Complemental strand, 22482207 - 22482163
Alignment:
Q  278 tgttgtttggatagttttgatcaaaattacttttgaatgtataat 322  Q
    |||||||||||||||||  |||||||||  |||||||||||||||    
T  22482207 tgttgtttggatagtttgaatcaaaattgattttgaatgtataat 22482163  T

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Target: scaffold0097 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 164 - 345
Target Start/End: Original strand, 32428 - 32609
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattga 263  Q
    |||||||||||||||| ||||||||| ||| |||||||||| |||||||||||| | ||| | ||||||||||||||||||| |||||||||| ||||||    
T  32428 tagaattgattctgactgaattgattatgatagaattgattgtgacagaattgattttgagataattgatttatgtttggatacaataatgcataattga 32527  T
Q  264 ttaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaat 345  Q
    ||||||| ||||| |||||||||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||| |||||    
T  32528 ttaaacaaaatgaatgttgtttggatagtttttatcaaaattgcttttgaatgtataattactaaaatggacatagctaaat 32609  T

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Target: scaffold0068 (Bit Score: 102; Significance: 2e-50; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 182 - 355
Target Start/End: Complemental strand, 38425 - 38252
Alignment:
Q  182 aattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgtt 281  Q
    |||||||||| | ||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||||||||||||||||| | ||| ||||    
T  38425 aattgattctaatagaattgattttgacagaattgattttgagagaattgatttatgtttggatacaataatgcagaattgattaaacaaactgaatgtt 38326  T
Q  282 gtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||| ||||||||| ||||||||| ||||||||||| ||||||| ||||| ||||||| ||||| ||| |||||    
T  38325 gtttcgatagtttttatcaaaattgcttttgaatgtttaattactaaaatggacatagctaaattcaagtaaat 38252  T

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Target: scaffold0068; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 38413 - 38372
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattt 205  Q
    ||||||||||| |||||||||||||| ||| |||||||||||    
T  38413 tagaattgattttgacagaattgattttgagagaattgattt 38372  T

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Target: scaffold0006 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 167 - 355
Target Start/End: Complemental strand, 92274 - 92086
Alignment:
Q  167 aattgattctgacagaattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgatta 266  Q
    |||||||||||||| |||||||||||| | |||||||| |||||||||||| | ||| ||| |||||||||||||  || ||||||||||||||||||||    
T  92274 aattgattctgacataattgattctgatataattgattatgacagaattgattttgagagatttgatttatgttt--atacaataatgcagaattgatta 92177  T
Q  267 aacagaatgattgttgtttggatag--ttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||| | | | ||||||| ||||||  |||| ||||||||| ||||||||||||||||||| ||||| ||||||||||||| ||| |||||    
T  92176 aacaaactaaatgttgttaggatagtttttttatcaaaattgcttttgaatgtataattactaaaatggacatagttaaattcaagtaaat 92086  T

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Target: scaffold0184 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 225 - 355
Target Start/End: Original strand, 9202 - 9332
Alignment:
Q  225 agaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataatta 324  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||| | ||| ||||||||||||||||||||||||||||  |||| ||||||||||||    
T  9202 agaattgatttatgtttggatacaataatgcataattgattaaacaaactgaatgttgtttggatagttttgatcaaaattgattttaaatgtataatta 9301  T
Q  325 ccaaaatagacatagttaaatacaaataaat 355  Q
    | ||||| ||||||| |||||||||||||||    
T  9302 ctaaaatggacatagctaaatacaaataaat 9332  T

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Target: scaffold0808 (Bit Score: 83; Significance: 4e-39; HSPs: 2)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 182 - 355
Target Start/End: Complemental strand, 4810 - 4636
Alignment:
Q  182 aattgattctgaaagaattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgtt 281  Q
    |||||||||||| |||||||||| |||||||||||| | | ||||||||||||||||||||||| |||||||| |||||||||||||||   |||  |||    
T  4810 aattgattctgatagaattgattctgacagaattgattttaacagaattgatttatgtttggatacaataatgtagaattgattaaacaagctgaacgtt 4711  T
Q  282 gtttggata-gttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||||||||  |||| ||||||||| |||||||||||||||||||  |||| ||||||| ||||| ||| |||||    
T  4710 gtttggatatttttttatcaaaatttcttttgaatgtataattactgaaatggacatagctaaattcaagtaaat 4636  T

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Target: scaffold0808; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 4798 - 4757
Alignment:
Q  164 tagaattgattctgacagaattgattctgaaagaattgattt 205  Q
    |||||||||||||||||||||||||| | | |||||||||||    
T  4798 tagaattgattctgacagaattgattttaacagaattgattt 4757  T

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Target: scaffold0003 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 197 - 355
Target Start/End: Original strand, 301665 - 301823
Alignment:
Q  197 aattgattttgacagaattgactctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 296  Q
    |||||||| |||||||||||| | | | | |||||||||| ||||||||   |||||||| |||||||||||||   ||| |||||||||||||||||||    
T  301665 aattgattctgacagaattgattttaagataattgatttacgtttggatattataatgcaaaattgattaaacacgttgaatgttgtttggatagttttg 301764  T
Q  297 atcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 355  Q
    |||||||||  |||||||||||||| ||| ||||  |||||| ||||||||| ||||||    
T  301765 atcaaaattgtttttgaatgtataagtactaaaaccgacataattaaatacatataaat 301823  T

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Target: scaffold0069 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 247 - 355
Target Start/End: Complemental strand, 17471 - 17360
Alignment:
Q  247 caataatgcagaattgattaaacagaatgattgttgtttggatagttttg---atcaaaattacttttgaatgtataattaccaaaatagacatagttaa 343  Q
    |||||||||||||||||||||||| | | | ||||||| ||||||||||    |||||||||  |||||||| ||||||||| ||||| |||||||||||    
T  17471 caataatgcagaattgattaaacaaactaaatgttgttcggatagttttttttatcaaaattgtttttgaatatataattactaaaatggacatagttaa 17372  T
Q  344 atacaaataaat 355  Q
    || ||| |||||    
T  17371 attcaagtaaat 17360  T

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Target: scaffold0041 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 331
Target Start/End: Complemental strand, 46767 - 46714
Alignment:
Q  278 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 331  Q
    ||||||||||||||||   |||||||||  ||||| ||||||||||||||||||    
T  46767 tgttgtttggatagttcaaatcaaaattgattttggatgtataattaccaaaat 46714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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