View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11857_low_9 (Length: 367)
Name: NF11857_low_9
Description: NF11857
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11857_low_9 |
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Alignment Details
Target: chr3 (Bit Score: 336; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 7 - 350
Target Start/End: Original strand, 26366 - 26709
Alignment:
| Q |
7 |
aataagtctggaagtagaatgctgcaaatttgtgtagaagaagtaaataaatatgcctaagagaggataacataacatacactttgaaaccagtatgttg |
106 |
Q |
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| T |
26366 |
aataagtctggaagtagaatgctgcaaatttgtgtagaagaagtaaataaatatgcctaagagaggataacataacatacactttgaaaccagtatgttg |
26465 |
T |
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| Q |
107 |
aagatagctaaggtatggatacgtacttgaaaccattgcaagctactcgatatgcaaaatctcttgtggaggagtcctcaaacccataaacatcagaaag |
206 |
Q |
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| T |
26466 |
aagatagctagggtatggatacgtacttgaaaccattgcaagctactcgatatgcaaaatctcttgtggaggagtcctcaaacccataaacatcagaaag |
26565 |
T |
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| Q |
207 |
aagcaataggccaattccattgttattttttactgccttgaaaagataagcatgaacattatcatcgccatcctctaatgaaagctcctctccactgact |
306 |
Q |
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| T |
26566 |
aagcaataggccaattccattgttattttttactgccttgaaaagataagcatgaacattatcatcgccatcctctaacgaaagctcctctccactgact |
26665 |
T |
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| Q |
307 |
aattcacatgcatcatcatctatcacactttccacattcagtaa |
350 |
Q |
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| T |
26666 |
aattcacatgcatcatcatctatcacactttccacattcagtaa |
26709 |
T |
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