View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11858_low_6 (Length: 395)

Name: NF11858_low_6
Description: NF11858
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11858_low_6
NF11858_low_6
[»] chr1 (59 HSPs)
chr1 (129-380)||(15323047-15323302)
chr1 (17-127)||(15322901-15323011)
chr1 (206-363)||(1486646-1486807)
chr1 (225-365)||(46348323-46348462)
chr1 (218-296)||(398772-398851)
chr1 (218-364)||(5927281-5927426)
chr1 (204-365)||(18471257-18471414)
chr1 (227-365)||(22515827-22515964)
chr1 (225-296)||(38078668-38078740)
chr1 (218-296)||(48450594-48450673)
chr1 (218-295)||(6427323-6427401)
chr1 (218-306)||(6612168-6612257)
chr1 (225-293)||(18556466-18556535)
chr1 (229-365)||(37598816-37598950)
chr1 (17-75)||(15312946-15313005)
chr1 (216-306)||(37055853-37055944)
chr1 (216-306)||(5944252-5944345)
chr1 (218-365)||(20157284-20157436)
chr1 (218-271)||(2896154-2896207)
chr1 (218-306)||(5376497-5376586)
chr1 (222-306)||(9629897-9629982)
chr1 (219-291)||(23531790-23531863)
chr1 (218-271)||(40917724-40917777)
chr1 (221-363)||(42359391-42359532)
chr1 (218-296)||(14359529-14359607)
chr1 (211-288)||(1262850-1262928)
chr1 (252-365)||(1704935-1705044)
chr1 (213-290)||(8842727-8842805)
chr1 (221-290)||(16927198-16927268)
chr1 (231-296)||(22881623-22881689)
chr1 (231-296)||(36878447-36878513)
chr1 (218-290)||(5898279-5898352)
chr1 (220-296)||(9709795-9709872)
chr1 (316-365)||(29144320-29144369)
chr1 (220-296)||(41877477-41877554)
chr1 (218-267)||(48040499-48040548)
chr1 (253-296)||(16164322-16164366)
chr1 (309-365)||(17408765-17408821)
chr1 (252-295)||(32461471-32461515)
chr1 (225-296)||(52903229-52903301)
chr1 (216-271)||(16297316-16297371)
chr1 (309-364)||(21032280-21032335)
chr1 (216-290)||(34257923-34257998)
chr1 (220-290)||(34298411-34298482)
chr1 (317-366)||(25361966-25362013)
chr1 (195-296)||(31014993-31015095)
chr1 (219-296)||(38503294-38503372)
chr1 (235-295)||(113289-113350)
chr1 (218-306)||(7918208-7918297)
chr1 (227-268)||(9033044-9033085)
chr1 (218-271)||(10572622-10572675)
chr1 (319-372)||(21365985-21366038)
chr1 (220-279)||(9103615-9103675)
chr1 (316-364)||(9103693-9103741)
chr1 (221-295)||(13011223-13011299)
chr1 (211-271)||(15641063-15641123)
chr1 (231-271)||(17831564-17831604)
chr1 (211-306)||(47989464-47989559)
chr1 (252-365)||(51410031-51410144)
[»] chr6 (52 HSPs)
chr6 (218-365)||(33001229-33001375)
chr6 (225-364)||(17841530-17841668)
chr6 (218-363)||(12696297-12696446)
chr6 (218-365)||(34595107-34595253)
chr6 (218-296)||(7938089-7938168)
chr6 (211-296)||(426521-426607)
chr6 (218-365)||(8776908-8777059)
chr6 (195-306)||(3398569-3398680)
chr6 (219-367)||(7977768-7977915)
chr6 (218-366)||(16766670-16766828)
chr6 (220-364)||(9658854-9658998)
chr6 (218-353)||(853811-853945)
chr6 (218-306)||(9027151-9027240)
chr6 (218-306)||(9107367-9107456)
chr6 (221-269)||(13851712-13851760)
chr6 (222-296)||(17341671-17341746)
chr6 (219-296)||(5732517-5732595)
chr6 (219-296)||(9629357-9629435)
chr6 (220-296)||(7086770-7086847)
chr6 (218-306)||(10294080-10294169)
chr6 (218-306)||(10770671-10770760)
chr6 (218-364)||(31959132-31959268)
chr6 (195-306)||(8365516-8365628)
chr6 (225-291)||(16388245-16388311)
chr6 (218-296)||(16833281-16833360)
chr6 (195-296)||(6389693-6389795)
chr6 (220-289)||(8805586-8805656)
chr6 (231-296)||(10842518-10842584)
chr6 (234-299)||(19040341-19040407)
chr6 (225-365)||(28152079-28152217)
chr6 (218-271)||(5000659-5000712)
chr6 (220-296)||(15489739-15489816)
chr6 (225-306)||(21395305-21395386)
chr6 (229-296)||(7265600-7265668)
chr6 (211-290)||(7625088-7625168)
chr6 (316-368)||(17302638-17302690)
chr6 (225-296)||(20371117-20371189)
chr6 (252-364)||(31384927-31385048)
chr6 (218-296)||(2117050-2117128)
chr6 (225-295)||(10888982-10889053)
chr6 (218-296)||(30866151-30866230)
chr6 (218-295)||(4118341-4118419)
chr6 (218-295)||(17435172-17435250)
chr6 (336-365)||(7490124-7490153)
chr6 (239-287)||(24614404-24614453)
chr6 (194-306)||(25038068-25038181)
chr6 (218-296)||(3209355-3209434)
chr6 (316-368)||(7938170-7938222)
chr6 (317-365)||(13360313-13360361)
chr6 (211-365)||(17327590-17327748)
chr6 (219-290)||(34073360-34073432)
chr6 (333-365)||(34446658-34446690)
[»] chr3 (51 HSPs)
chr3 (218-368)||(55401048-55401197)
chr3 (218-363)||(28917974-28918120)
chr3 (194-296)||(8383206-8383309)
chr3 (204-368)||(15796220-15796394)
chr3 (225-295)||(25948895-25948966)
chr3 (218-289)||(25064882-25064954)
chr3 (220-306)||(14216867-14216954)
chr3 (220-306)||(14222996-14223083)
chr3 (223-296)||(10268493-10268567)
chr3 (218-271)||(3164058-3164111)
chr3 (218-271)||(26492238-26492291)
chr3 (227-306)||(14832081-14832161)
chr3 (218-296)||(8587028-8587107)
chr3 (218-296)||(10335293-10335372)
chr3 (228-271)||(23870592-23870635)
chr3 (218-296)||(24205048-24205127)
chr3 (218-296)||(38731191-38731270)
chr3 (251-366)||(27505252-27505371)
chr3 (228-296)||(49505161-49505230)
chr3 (232-295)||(4987299-4987363)
chr3 (218-289)||(5441045-5441117)
chr3 (219-306)||(9800014-9800102)
chr3 (225-296)||(29508424-29508496)
chr3 (222-297)||(32804546-32804622)
chr3 (225-268)||(3865592-3865635)
chr3 (225-296)||(10318042-10318113)
chr3 (224-290)||(11493374-11493441)
chr3 (228-365)||(18426932-18427068)
chr3 (218-296)||(26508083-26508162)
chr3 (251-296)||(1509545-1509591)
chr3 (231-296)||(1514603-1514669)
chr3 (193-271)||(4466633-4466711)
chr3 (225-271)||(6525713-6525759)
chr3 (218-287)||(14979154-14979224)
chr3 (311-365)||(34185052-34185106)
chr3 (218-271)||(2620086-2620139)
chr3 (248-296)||(7928453-7928502)
chr3 (218-306)||(11665917-11666006)
chr3 (231-306)||(14747547-14747624)
chr3 (218-267)||(14829663-14829712)
chr3 (231-365)||(40993275-40993409)
chr3 (221-296)||(4990974-4991050)
chr3 (225-296)||(10954932-10955004)
chr3 (220-272)||(12674533-12674585)
chr3 (309-365)||(14209187-14209243)
chr3 (231-271)||(15544679-15544719)
chr3 (336-364)||(15864922-15864950)
chr3 (311-367)||(17276792-17276848)
chr3 (231-271)||(21479104-21479144)
chr3 (231-271)||(40052318-40052358)
chr3 (251-306)||(49651783-49651839)
[»] scaffold0053 (1 HSPs)
scaffold0053 (218-365)||(8771-8917)
[»] chr8 (42 HSPs)
chr8 (218-367)||(22651949-22652108)
chr8 (219-306)||(2572053-2572141)
chr8 (195-365)||(8342930-8343086)
chr8 (228-306)||(15816126-15816205)
chr8 (218-296)||(20873042-20873121)
chr8 (221-295)||(36934646-36934721)
chr8 (218-271)||(29510337-29510390)
chr8 (218-296)||(4298893-4298972)
chr8 (216-365)||(8343287-8343446)
chr8 (211-296)||(25192354-25192440)
chr8 (194-271)||(13436997-13437074)
chr8 (228-296)||(34897068-34897137)
chr8 (211-271)||(4673458-4673518)
chr8 (218-296)||(22197749-22197828)
chr8 (220-271)||(41838156-41838207)
chr8 (225-368)||(36450691-36450833)
chr8 (211-290)||(3677752-3677832)
chr8 (248-299)||(20785469-20785521)
chr8 (195-267)||(28642358-28642430)
chr8 (218-296)||(29357949-29358029)
chr8 (231-290)||(39954292-39954352)
chr8 (283-361)||(4498342-4498418)
chr8 (220-286)||(13018256-13018323)
chr8 (218-296)||(24362209-24362288)
chr8 (190-296)||(24669379-24669485)
chr8 (230-296)||(27101500-27101566)
chr8 (218-296)||(27213520-27213599)
chr8 (225-272)||(31109550-31109597)
chr8 (211-269)||(11093598-11093656)
chr8 (211-288)||(18170497-18170575)
chr8 (211-288)||(18634065-18634143)
chr8 (231-296)||(20679402-20679468)
chr8 (333-367)||(34127170-34127204)
chr8 (217-285)||(28745470-28745539)
chr8 (316-365)||(29510233-29510282)
chr8 (222-271)||(29776013-29776062)
chr8 (218-270)||(926822-926874)
chr8 (309-365)||(11944739-11944795)
chr8 (317-365)||(13397622-13397670)
chr8 (251-306)||(25566847-25566903)
chr8 (231-286)||(29519181-29519237)
chr8 (237-296)||(31236584-31236644)
[»] chr2 (44 HSPs)
chr2 (219-305)||(20539672-20539759)
chr2 (225-365)||(37558957-37559096)
chr2 (218-365)||(18840953-18841099)
chr2 (223-365)||(15972851-15972992)
chr2 (220-295)||(21616737-21616813)
chr2 (218-296)||(30404857-30404936)
chr2 (216-306)||(36756341-36756432)
chr2 (216-296)||(4882703-4882784)
chr2 (220-288)||(12940950-12941019)
chr2 (223-361)||(6940233-6940370)
chr2 (225-296)||(39323244-39323316)
chr2 (225-268)||(4763447-4763490)
chr2 (221-291)||(15349816-15349887)
chr2 (218-296)||(23717999-23718078)
chr2 (218-296)||(24105671-24105750)
chr2 (220-296)||(14996230-14996308)
chr2 (220-289)||(28412325-28412395)
chr2 (220-289)||(36409641-36409711)
chr2 (225-289)||(16069268-16069333)
chr2 (224-367)||(30717457-30717610)
chr2 (194-296)||(19536404-19536508)
chr2 (225-296)||(21374706-21374778)
chr2 (219-289)||(21782832-21782903)
chr2 (206-288)||(30335378-30335461)
chr2 (218-296)||(31018563-31018642)
chr2 (251-363)||(2438661-2438772)
chr2 (244-357)||(5040731-5040845)
chr2 (223-261)||(10547973-10548011)
chr2 (226-295)||(24894370-24894440)
chr2 (225-290)||(28677889-28677955)
chr2 (219-269)||(29663983-29664033)
chr2 (309-367)||(35056942-35057000)
chr2 (220-269)||(6290132-6290181)
chr2 (218-306)||(15657837-15657926)
chr2 (216-296)||(18421934-18422015)
chr2 (220-296)||(27286299-27286376)
chr2 (316-365)||(34006930-34006979)
chr2 (231-271)||(11670741-11670781)
chr2 (307-367)||(18054714-18054774)
chr2 (253-296)||(18255987-18256031)
chr2 (316-368)||(19580222-19580274)
chr2 (220-291)||(23921228-23921300)
chr2 (206-281)||(34337198-34337274)
chr2 (231-271)||(38117192-38117232)
[»] chr7 (46 HSPs)
chr7 (204-360)||(13770650-13770810)
chr7 (218-365)||(5409771-5409922)
chr7 (219-366)||(43027403-43027554)
chr7 (221-296)||(14077441-14077517)
chr7 (221-296)||(14387469-14387545)
chr7 (192-269)||(24105626-24105702)
chr7 (220-366)||(598183-598328)
chr7 (211-365)||(25481868-25482021)
chr7 (195-306)||(27944991-27945103)
chr7 (221-366)||(1433430-1433579)
chr7 (206-296)||(11061083-11061174)
chr7 (220-271)||(26733279-26733330)
chr7 (225-365)||(15680789-15680928)
chr7 (231-296)||(42720897-42720963)
chr7 (218-306)||(24339615-24339704)
chr7 (217-269)||(4793835-4793887)
chr7 (219-290)||(5235960-5236032)
chr7 (220-295)||(5956248-5956324)
chr7 (195-306)||(7328688-7328800)
chr7 (211-271)||(11722131-11722191)
chr7 (218-299)||(17851404-17851486)
chr7 (206-306)||(6028586-6028687)
chr7 (223-307)||(10042915-10043000)
chr7 (255-365)||(9778510-9778624)
chr7 (218-296)||(15902795-15902874)
chr7 (211-296)||(19206016-19206102)
chr7 (218-302)||(22868015-22868100)
chr7 (230-306)||(32308105-32308182)
chr7 (252-304)||(35861971-35862024)
chr7 (216-296)||(21864777-21864860)
chr7 (227-293)||(1401007-1401074)
chr7 (253-295)||(38143231-38143274)
chr7 (218-296)||(43249966-43250045)
chr7 (219-306)||(49107795-49107882)
chr7 (195-284)||(2034392-2034481)
chr7 (219-296)||(4017801-4017879)
chr7 (211-296)||(7438672-7438758)
chr7 (311-365)||(17852065-17852119)
chr7 (204-241)||(1656643-1656680)
chr7 (311-364)||(32287404-32287457)
chr7 (333-365)||(1042376-1042408)
chr7 (221-296)||(3721070-3721145)
chr7 (253-296)||(9408341-9408385)
chr7 (221-296)||(21140989-21141065)
chr7 (251-306)||(26033458-26033514)
chr7 (226-289)||(29787383-29787447)
[»] chr4 (41 HSPs)
chr4 (218-365)||(23292926-23293072)
chr4 (216-296)||(44081584-44081665)
chr4 (218-362)||(28084494-28084640)
chr4 (220-296)||(20633460-20633534)
chr4 (218-364)||(3947702-3947852)
chr4 (220-306)||(30838185-30838272)
chr4 (218-365)||(35157925-35158071)
chr4 (220-271)||(20521882-20521933)
chr4 (221-365)||(2361915-2362058)
chr4 (225-366)||(12895054-12895194)
chr4 (218-366)||(12895213-12895360)
chr4 (218-364)||(30982808-30982961)
chr4 (220-295)||(27706185-27706261)
chr4 (309-365)||(35161099-35161155)
chr4 (218-269)||(847924-847975)
chr4 (220-271)||(11651167-11651218)
chr4 (219-304)||(31800477-31800563)
chr4 (218-295)||(36635297-36635375)
chr4 (218-295)||(40481610-40481687)
chr4 (219-306)||(16303263-16303351)
chr4 (218-296)||(35723391-35723470)
chr4 (218-296)||(49430998-49431078)
chr4 (228-267)||(4383351-4383390)
chr4 (230-269)||(5096131-5096170)
chr4 (218-296)||(21945476-21945555)
chr4 (220-290)||(22440613-22440684)
chr4 (225-268)||(30298926-30298969)
chr4 (225-268)||(30327794-30327837)
chr4 (226-296)||(33950117-33950188)
chr4 (219-296)||(14126118-14126196)
chr4 (225-290)||(40179649-40179715)
chr4 (218-365)||(752871-753020)
chr4 (225-285)||(12077808-12077869)
chr4 (194-271)||(12628618-12628694)
chr4 (218-267)||(28720849-28720898)
chr4 (251-299)||(28964252-28964301)
chr4 (231-268)||(36509131-36509168)
chr4 (252-296)||(54580030-54580075)
chr4 (251-365)||(715545-715661)
chr4 (253-296)||(6485618-6485662)
chr4 (220-295)||(19482643-19482719)
[»] scaffold0003 (1 HSPs)
scaffold0003 (218-306)||(241567-241656)
[»] chr5 (40 HSPs)
chr5 (218-363)||(21190998-21191142)
chr5 (194-291)||(22013363-22013461)
chr5 (225-296)||(14674249-14674321)
chr5 (218-367)||(21522723-21522882)
chr5 (218-367)||(21533289-21533448)
chr5 (228-365)||(39698524-39698671)
chr5 (218-306)||(13287396-13287485)
chr5 (195-296)||(19820403-19820503)
chr5 (231-365)||(31084309-31084447)
chr5 (206-296)||(6326304-6326395)
chr5 (225-299)||(27144443-27144518)
chr5 (255-365)||(43564891-43565000)
chr5 (218-296)||(6247595-6247674)
chr5 (229-303)||(30098310-30098385)
chr5 (218-296)||(36642769-36642848)
chr5 (225-295)||(43001780-43001851)
chr5 (231-296)||(5467985-5468051)
chr5 (218-268)||(15382450-15382500)
chr5 (221-271)||(19552576-19552626)
chr5 (218-303)||(24906301-24906387)
chr5 (218-293)||(14422877-14422951)
chr5 (220-261)||(15410491-15410532)
chr5 (226-306)||(19579682-19579763)
chr5 (219-296)||(15405062-15405138)
chr5 (225-366)||(21576684-21576824)
chr5 (225-271)||(7175052-7175098)
chr5 (237-302)||(16881128-16881194)
chr5 (251-296)||(23012415-23012461)
chr5 (223-288)||(41995449-41995515)
chr5 (230-306)||(3966488-3966565)
chr5 (206-271)||(17123009-17123074)
chr5 (231-366)||(39205866-39206005)
chr5 (231-271)||(2436908-2436948)
chr5 (229-296)||(8420011-8420079)
chr5 (225-296)||(16203802-16203874)
chr5 (194-365)||(32630675-32630841)
chr5 (195-271)||(37328877-37328953)
chr5 (232-295)||(38749571-38749635)
chr5 (223-271)||(40000568-40000616)
chr5 (221-288)||(42488068-42488136)
[»] scaffold0652 (1 HSPs)
scaffold0652 (221-364)||(403-545)
[»] scaffold0223 (1 HSPs)
scaffold0223 (218-306)||(20145-20234)
[»] scaffold0018 (2 HSPs)
scaffold0018 (218-296)||(178825-178905)
scaffold0018 (220-299)||(192253-192333)
[»] scaffold0103 (1 HSPs)
scaffold0103 (225-295)||(51791-51862)
[»] scaffold0027 (1 HSPs)
scaffold0027 (206-288)||(46643-46726)
[»] scaffold0007 (1 HSPs)
scaffold0007 (218-296)||(225275-225354)
[»] scaffold0008 (1 HSPs)
scaffold0008 (223-306)||(263369-263453)
[»] scaffold0246 (1 HSPs)
scaffold0246 (218-295)||(19549-19626)
[»] scaffold0044 (1 HSPs)
scaffold0044 (235-296)||(53170-53232)
[»] scaffold0171 (1 HSPs)
scaffold0171 (218-306)||(23393-23482)
[»] scaffold0004 (1 HSPs)
scaffold0004 (228-296)||(92790-92859)
[»] scaffold0722 (1 HSPs)
scaffold0722 (228-295)||(7040-7108)
[»] scaffold0380 (1 HSPs)
scaffold0380 (309-365)||(8664-8720)
[»] scaffold0024 (1 HSPs)
scaffold0024 (312-364)||(68172-68224)
[»] scaffold0021 (1 HSPs)
scaffold0021 (218-296)||(130455-130534)
[»] scaffold0793 (1 HSPs)
scaffold0793 (218-365)||(4821-4970)
[»] scaffold0361 (1 HSPs)
scaffold0361 (252-365)||(14537-14646)
[»] scaffold0122 (1 HSPs)
scaffold0122 (218-306)||(8639-8728)
[»] scaffold0011 (1 HSPs)
scaffold0011 (252-296)||(17756-17801)
[»] scaffold0598 (1 HSPs)
scaffold0598 (225-269)||(8088-8132)
[»] scaffold0306 (1 HSPs)
scaffold0306 (195-271)||(13350-13426)
[»] scaffold0227 (1 HSPs)
scaffold0227 (252-295)||(7319-7363)
[»] scaffold0152 (1 HSPs)
scaffold0152 (195-271)||(21901-21977)
[»] scaffold0085 (1 HSPs)
scaffold0085 (225-296)||(26373-26445)
[»] scaffold0083 (1 HSPs)
scaffold0083 (214-246)||(45589-45621)
[»] scaffold0049 (1 HSPs)
scaffold0049 (210-269)||(63737-63797)


Alignment Details
Target: chr1 (Bit Score: 150; Significance: 3e-79; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 129 - 380
Target Start/End: Original strand, 15323047 - 15323302
Alignment:
Q  129 aagctttcattggtcacagttacccatgttgccatgtcttctttcgctcttattattagtagaattctatgaagcatggacccggatatcggacacgaca 228  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | | ||||||| |||||||||| |||| | |||||||||||    
T  15323047 aagctttcattggtcacagttacccatcttgccatgtcttctttcgctcttattattactggtattctataaagcatggacacggacaccggacacgaca 15323146  T
Q  229 cggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt---atacgacatgtgtccgac 324  Q
     ||||||||||| |||||||| | ||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||   ||| |||| |||||||||    
T  15323147 tggacactgacatgtcgatacagttaataatttgaaaaaatcacataatttagtgtaattgtaagtgtctgtatcgtgttggatatgacacgtgtccgac 15323246  T
Q  325 accgaaatacacctaatccaaagagtgtccgtgcttcatagctagtattcctattt 380  Q
    ||||||| ||||||||||| | ||||||| ||| ||||||||||||||||||||||    
T  15323247 accgaaacacacctaatccgaggagtgtcagtgtttcatagctagtattcctattt 15323302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 17 - 127
Target Start/End: Original strand, 15322901 - 15323011
Alignment:
Q  17 gaacaagaaaaaattatcaaaggaacagttgcatcctatttaacattaaaagaataatagcaatcaagctgcatgccttcatctaaagttcatggaattt 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  15322901 gaacaagaaaaaattatcaaaggaacagttgcatcctatttaacattaaaagcataatagcaatcaagctgcatgccttgatctaaagttcatggaattt 15323000  T
Q  117 gatgcagcata 127  Q
    |||| ||||||    
T  15323001 gatgaagcata 15323011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 206 - 363
Target Start/End: Complemental strand, 1486807 - 1486646
Alignment:
Q  206 ggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgt 304  Q
    |||| |||||| |||| |||||||||| |||||||||  || || ||||||||||||||||||||| |||||| | |||||||||||||||| || ||||    
T  1486807 ggacacggataccggatacgacacggatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgt 1486708  T
Q  305 gt---atacgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcat 363  Q
    ||   | |||||| |||||||||||||  | || |||||||| | ||||||| |||||||||    
T  1486707 gtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 225 - 365
Target Start/End: Complemental strand, 46348462 - 46348323
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgtccga 323  Q
    |||||||||||||||||| ||| || ||||||||||||||||||||| |||||||| |||||||| ||||||| || ||  | | |||||| ||||||||    
T  46348462 gacacggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtc--ggacacgacacgtgtccga 46348365  T
Q  324 caccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    |||||| | || ||| |||| | | |||||||||||||||||    
T  46348364 caccgagacacgcctgatccgaggtgtgtccgtgcttcatag 46348323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 398851 - 398772
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||| | |||||||||| |||||    
T  398851 cggacacgacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattataggtgtc 398772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 218 - 364
Target Start/End: Complemental strand, 5927426 - 5927281
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatg 316  Q
    |||||||||||||||||||||||||   | || ||||||||||||||||||||| ||||||||||||||||| ||||||| || ||  | | | ||||      
T  5927426 cggacacgacacggacactgacacgctaacactgctaataatttgaaaaaatcatataatttaatgtaattacaagtgtcagtgtc--ggacatgacaaa 5927329  T
Q  317 tgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcata 364  Q
    ||||||||| ||||| |  |||||||  | ||||||||||||||||||    
T  5927328 tgtccgacatcgaaacatgcctaatctgaggagtgtccgtgcttcata 5927281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 365
Target Start/End: Original strand, 18471257 - 18471414
Alignment:
Q  204 atggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttg--aaaaaatca-ataatttaatgtaattataagtgtctgta 300  Q
    |||||| ||||||||||| |||||||||||| |||| |||||| || ||||||||||||  ||||||||| |||||| | | |||||| |||||||        
T  18471257 atggacacggatatcggatacgacacggacaatgacccgtcgacacagctaataatttgaaaaaaaatcacataattcagtataattacaagtgtc---- 18471352  T
Q  301 tcgtgtatacgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
        ||| |||||| |||||||||||||||| ||||||||| | | |||||||||| ||||||||    
T  18471353 ---ggtacacgacacgtgtccgacaccgaaacacacctaattcgaggagtgtccgtacttcatag 18471414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 22515964 - 22515827
Alignment:
Q  227 cacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgtccgaca 325  Q
    ||||||||| ||||||  || || ||||||||||||||||||||| |||||||| |||||||| ||||||| || ||  | | ||||||  | |||||||    
T  22515964 cacggacacggacacgcagacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc--ggacacgacacatatccgaca 22515867  T
Q  326 ccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    |||| | || |||||||| | |||||||||||||||||||    
T  22515866 ccgagacacgcctaatccgaggagtgtccgtgcttcatag 22515827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 225 - 296
Target Start/End: Complemental strand, 38078740 - 38078668
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||| ||||||||||||||| || ||||||||||||||||||||| |||||| |||||||||| |||||||    
T  38078740 gacacgaacactgacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtc 38078668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 48450673 - 48450594
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||||||||||||||||||||||| | | || ||||||||||||||||||| | |||||||| |||||||| |||||||    
T  48450673 cggacacgacacggacactgacacgccaacacagctaataatttgaaaaaataacataatttagtgtaattacaagtgtc 48450594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 295
Target Start/End: Original strand, 6427323 - 6427401
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgt 295  Q
    |||||||| |||||||||||||||| | | |||||||||||||||| ||||||| |||||| |||||||||||| ||||    
T  6427323 cggacacggcacggacactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgt 6427401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 6612257 - 6612168
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    ||||||||||||||||| ||||||| |||||| | ||||||||||||||||| | |||||| | |||||||| ||||||| || ||||||    
T  6612257 cggacacgacacggacaatgacacgccgatacagttaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcgtgt 6612168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 18556535 - 18556466
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagt 293  Q
    |||||||||||||||||| ||| || |||||||||||||||| |||| ||||||||||||||||| ||||    
T  18556535 gacacggacactgacacgccgacacagctaataatttgaaaatatcacataatttaatgtaattacaagt 18556466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 37598816 - 37598950
Alignment:
Q  229 cggacactgacacgtcgataccgctaataatttgaaaaaatcaataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgtccgacaccg 328  Q
    |||||||||||||| ||| ||  ||||||||||||||||||||  |||| | |||||||||||||||| || ||  | | |||||| ||||||||||  |    
T  37598816 cggacactgacacgccgacacaactaataatttgaaaaaatcacaaattcagtgtaattataagtgtcggtgtc--ggacacgacacgtgtccgacaatg 37598913  T
Q  329 aaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
      | || |||||||| | |||||||||||||||||||    
T  37598914 ggacacgcctaatccgaggagtgtccgtgcttcatag 37598950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 15312946 - 15313005
Alignment:
Q  17 gaacaagaaaaaattatcaaaggaacagttgcatcctatttaaca-ttaaaagaataata 75  Q
    ||||||||||||| ||| |||| |||||||||||||||||||||| ||||||||||||||    
T  15312946 gaacaagaaaaaagtattaaagaaacagttgcatcctatttaacatttaaaagaataata 15313005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 306
Target Start/End: Complemental strand, 37055944 - 37055853
Alignment:
Q  216 atcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    |||||||| ||||| |||||||| || ||||||| ||||||||||||| ||||| | |||||||| |||||||| |||| || |||||||||    
T  37055944 atcggacatgacacagacactgatacatcgatactgctaataatttgagaaaattacataatttagtgtaattacaagtatcagtatcgtgt 37055853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 216 - 306
Target Start/End: Original strand, 5944252 - 5944345
Alignment:
Q  216 atcggacacgacacggacactgacacgtcgataccgctaataatttg--aaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    |||||||||||||| |||||||||||| ||  || ||||||||||||  ||||||||| |||||| | |||||||||||||||| || ||||||    
T  5944252 atcggacacgacacagacactgacacgccgccacagctaataatttgaaaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgt 5944345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 218 - 365
Target Start/End: Complemental strand, 20157436 - 20157284
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt---ata-cga 312  Q
    |||||||||||||| ||||||||| |||| |||||||||||| ||| ||||||| |||||| | |||||| ||| ||||| || ||||||   | | |||    
T  20157436 cggacacgacacgggcactgacacatcgacaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcgtgtccgacaccga 20157337  T
Q  313 catgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    |  |||||||||||||| | |||||||||   | |||| ||||||||||||||    
T  20157336 cgcgtgtccgacaccgagacacacctaatttgaggagtatccgtgcttcatag 20157284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 2896207 - 2896154
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    ||||||| ||||||||||||||||| ||| |||||||||||||||| |||||||    
T  2896207 cggacacaacacggacactgacacgccgacaccgctaataatttgagaaaatca 2896154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 5376586 - 5376497
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||| | ||||| | |||||| | |||||||| ||||||| || ||||||    
T  5376586 cggacacgacacggacactaacacgccgacaccgctaataatttaagaaaataacataattcagtgtaattaaaagtgtcggtgtcgtgt 5376497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 306
Target Start/End: Complemental strand, 9629982 - 9629897
Alignment:
Q  222 cacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    ||||||| |||||| ||||| |||| |||||||||||||||| ||||||| |||||| | ||| |||||||||||| || ||||||    
T  9629982 cacgacatggacaccgacacatcgacaccgctaataatttgataaaatcatataattcagtgtgattataagtgtcggtgtcgtgt 9629897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 291
Target Start/End: Complemental strand, 23531863 - 23531790
Alignment:
Q  219 ggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataa 291  Q
    |||||||| |||||||| ||||| || |||| |||||||||||||||| |||| |||||| |||||||||||||    
T  23531863 ggacacgatacggacaccgacacttcaatactgctaataatttgaaaatatcacataattcaatgtaattataa 23531790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 40917724 - 40917777
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    ||||||||||||||| ||||||||| ||| || |||||||||||||||||||||    
T  40917724 cggacacgacacggatactgacacgccgacacagctaataatttgaaaaaatca 40917777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 221 - 363
Target Start/End: Complemental strand, 42359532 - 42359391
Alignment:
Q  221 acacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgt 319  Q
    |||| |||||||||||||||||  || ||  |||||||||||||||||||| | |||| | |||||||| ||||||| || ||  | | | ||| |||||    
T  42359532 acacaacacggacactgacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtc--ggacaagacgtgtgt 42359435  T
Q  320 ccgacaccgaaatacacctaatccaaagagtgtccgtgcttcat 363  Q
    |||||||||  | || |||||||| | |||||||||||||||||    
T  42359434 ccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 14359607 - 14359529
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||||||| ||||| |||||| ||| || ||||||||||||| ||||||| |||||||| |||||||| |||||||    
T  14359607 cggacacgacacagacacggacacgccgacacagctaataatttga-aaaatcacataatttagtgtaattacaagtgtc 14359529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 288
Target Start/End: Original strand, 1262850 - 1262928
Alignment:
Q  211 cggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaatta 288  Q
    |||||| ||||||||||||| |||| |||||| ||| || ||||||||||||| ||||||| |||||| ||| ||||||    
T  1262850 cggataccggacacgacacgaacacggacacgccgacacagctaataatttgagaaaatcacataattcaatataatta 1262928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 365
Target Start/End: Complemental strand, 1705044 - 1704935
Alignment:
Q  252 ctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgtccgacaccgaaatacacctaatccaaagagt 350  Q
    |||||||||||||||||||| |||||| |  ||||||| ||||||| || ||||||  |||     ||||||||||||| | || |||||||||| ||||    
T  1705044 ctaataatttgaaaaaatcacataattcagggtaattacaagtgtcggtgtcgtgtcaacg-----tgtccgacaccgagacacgcctaatccaaggagt 1704950  T
Q  351 gtccgtgcttcatag 365  Q
    |||| ||||||||||    
T  1704949 gtccatgcttcatag 1704935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 290
Target Start/End: Complemental strand, 8842805 - 8842727
Alignment:
Q  213 gatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattata 290  Q
    ||||||||||| ||||| |||||||||||| ||  ||| ||| |||||||| |||| || |||||||||||||||||||    
T  8842805 gatatcggacatgacacagacactgacacgccggcaccactagtaatttgagaaaaacatataatttaatgtaattata 8842727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 16927268 - 16927198
Alignment:
Q  221 acacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattata 290  Q
    ||||||||| |||||||||||||||  |  ||||||||||||||||||||| |||||| | ||||||||||    
T  16927268 acacgacacagacactgacacgtcggcatagctaataatttgaaaaaatcatataattcagtgtaattata 16927198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 296
Target Start/End: Complemental strand, 22881689 - 22881623
Alignment:
Q  231 gacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||||||| ||| ||  |||||||||||||||||||| |||||||| |||||||| |||||||    
T  22881689 gacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtc 22881623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 296
Target Start/End: Original strand, 36878447 - 36878513
Alignment:
Q  231 gacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||||||| ||| |||||||||||||||| ||||||| |||||| | |||||||||| |||||    
T  36878447 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtc 36878513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 290
Target Start/End: Complemental strand, 5898352 - 5898279
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattata 290  Q
    |||||| ||||| |||||||| ||| ||| |||||||||||| ||||||||||| |||||| | ||||||||||    
T  5898352 cggacatgacacagacactgagacgccgacaccgctaataatctgaaaaaatcacataattcagtgtaattata 5898279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 296
Target Start/End: Original strand, 9709795 - 9709872
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||||||||||||||||||| | | | |||||||||||||||| ||||||| ||||||   |||||||||| |||||    
T  9709795 gacacgacacggacactgacatgcctacaccgctaataatttgagaaaatcacataattcgttgtaattatatgtgtc 9709872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 365
Target Start/End: Complemental strand, 29144369 - 29144320
Alignment:
Q  316 gtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    ||||||||||||| || || |||||||| |||||||||||||||||||||    
T  29144369 gtgtccgacaccggaacacgcctaatccgaagagtgtccgtgcttcatag 29144320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 41877554 - 41877477
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||||| |||||||  ||| ||| |||||||||||||||| ||||| | |||||||| |||||||| |||||||    
T  41877554 gacacgacacagacactggtacgccgacaccgctaataatttgagaaaattacataatttagtgtaattacaagtgtc 41877477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 267
Target Start/End: Complemental strand, 48040548 - 48040499
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaa 267  Q
    ||||||||||||||||||||||||| ||| || | |||||||||||||||    
T  48040548 cggacacgacacggacactgacacgccgacacagataataatttgaaaaa 48040499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 16164366 - 16164322
Alignment:
Q  253 taataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||    
T  16164366 taataatttgaaaaaatcacataatttaatgtaattatatgtgtc 16164322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 365
Target Start/End: Original strand, 17408765 - 17408821
Alignment:
Q  309 acgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    |||||| |||||||||||| | ||||||||||||  ||||||||| |||||||||||    
T  17408765 acgacacgtgtccgacaccaagatacacctaatctgaagagtgtctgtgcttcatag 17408821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 295
Target Start/End: Complemental strand, 32461515 - 32461471
Alignment:
Q  252 ctaataatttgaaaaaatca-ataatttaatgtaattataagtgt 295  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||    
T  32461515 ctaataatttgaaaaaatcacataatttaatgtaattacaagtgt 32461471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 296
Target Start/End: Original strand, 52903229 - 52903301
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||||||| ||||| |||||||| ||||||||| | ||||||| |||||| | |||||||||| |||||    
T  52903229 gacacggacactaacacgccgataccgttaataatttaataaaatcatataattcagtgtaattatatgtgtc 52903301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 271
Target Start/End: Complemental strand, 16297371 - 16297316
Alignment:
Q  216 atcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    ||||||||||| ||||| ||||||||||||| || || |||||| |||||||||||    
T  16297371 atcggacacgatacggatactgacacgtcgacacagcaaataatatgaaaaaatca 16297316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 309 - 364
Target Start/End: Original strand, 21032280 - 21032335
Alignment:
Q  309 acgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcata 364  Q
    ||||||||||||||||| ||| | || |||||||||| ||||||| ||||||||||    
T  21032280 acgacatgtgtccgacatcgagagacgcctaatccaaggagtgtctgtgcttcata 21032335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 290
Target Start/End: Complemental strand, 34257998 - 34257923
Alignment:
Q  216 atcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattata 290  Q
    |||||||| || ||||| | ||||||||||| |||| ||||||||| | ||||||| |||||||| ||||||||||    
T  34257998 atcggacatgatacggatattgacacgtcgacaccgttaataatttaataaaatcacataatttagtgtaattata 34257923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 220 - 290
Target Start/End: Original strand, 34298411 - 34298482
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattata 290  Q
    ||||||||||||| ||||||||  ||| ||| |||||||||||| ||||||| |||||| | ||||||||||    
T  34298411 gacacgacacggaaactgacacaccgacaccactaataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 366
Target Start/End: Original strand, 25361966 - 25362013
Alignment:
Q  317 tgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatagc 366  Q
    |||||||||||| ||  |||||||||| ||||||||||||||||||||||    
T  25361966 tgtccgacaccggaa--cacctaatccgaagagtgtccgtgcttcatagc 25362013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 296
Target Start/End: Original strand, 31014993 - 31015095
Alignment:
Q  195 ctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagt 293  Q
    |||||||||| |||| | || | ||| |||||||||| ||||||| || | | || ||||||||||||| ||||||| |||||| | |||||||| ||||    
T  31014993 ctatgaagcacggacacagacaccgggcacgacacgggcactgacgcgcctacacagctaataatttgagaaaatcacataattcagtgtaattacaagt 31015092  T
Q  294 gtc 296  Q
    |||    
T  31015093 gtc 31015095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 38503294 - 38503372
Alignment:
Q  219 ggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||| |||||||||||| ||||  ||| |||||||||||||||| ||||||| ||| || | |||||||||| |||||    
T  38503294 ggacatgacacggacactaacacaccgacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtgtc 38503372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 295
Target Start/End: Original strand, 113289 - 113350
Alignment:
Q  235 ctgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgt 295  Q
    |||||||| ||| || ||||||||||||||||||||| |||||| | |||||||| ||||||    
T  113289 ctgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 113350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 7918297 - 7918208
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    |||||||||||| |||| |||||||  || | | |||||||||||| ||||||| |||||| | |||||||||| ||||| || ||||||    
T  7918297 cggacacgacacagacaatgacacgctgacatcactaataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgt 7918208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 268
Target Start/End: Complemental strand, 9033085 - 9033044
Alignment:
Q  227 cacggacactgacacgtcgataccgctaataatttgaaaaaa 268  Q
    |||||||||||||||||| | ||| |||||||||||||||||    
T  9033085 cacggacactgacacgtcaacaccactaataatttgaaaaaa 9033044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 10572675 - 10572622
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    ||||||||||| | ||||||||||| ||| ||| |||||||||||| |||||||    
T  10572675 cggacacgacatgaacactgacacgccgacaccactaataatttgagaaaatca 10572622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 372
Target Start/End: Complemental strand, 21366038 - 21365985
Alignment:
Q  319 tccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatagctagtat 372  Q
    ||||||||||| | || |||||||| | ||||||||||||||||||| ||||||    
T  21366038 tccgacaccgagacacgcctaatccgaggagtgtccgtgcttcataggtagtat 21365985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 279
Target Start/End: Original strand, 9103615 - 9103675
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataattta 279  Q
    |||| ||| |||||||||||||| ||| || | ||||||||||||||||||| ||||||||    
T  9103615 gacaggactcggacactgacacgccgacacagttaataatttgaaaaaatcacataattta 9103675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 364
Target Start/End: Original strand, 9103693 - 9103741
Alignment:
Q  316 gtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcata 364  Q
    ||||| |||||||||| || |||||||  ||||||||||||||||||||    
T  9103693 gtgtcggacaccgaaaaacgcctaatcttaagagtgtccgtgcttcata 9103741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 295
Target Start/End: Complemental strand, 13011299 - 13011223
Alignment:
Q  221 acacgacacggacactgacacgtcgataccgctaataatttgaa-aaaatca-ataatttaatgtaattataagtgt 295  Q
    |||||||||| ||||||||| | ||| || |||||||||||||| ||||||| |||||| | |||||||| ||||||    
T  13011299 acacgacacgaacactgacatgccgacacagctaataatttgaaaaaaatcacataattaagtgtaattacaagtgt 13011223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 15641123 - 15641063
Alignment:
Q  211 cggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    |||| |||||||| |||||||||||||||| | ||| || ||||||||||| | |||||||    
T  15641123 cggacatcggacatgacacggacactgacatgccgacactgctaataatttaagaaaatca 15641063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 17831604 - 17831564
Alignment:
Q  231 gacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    |||||||||||| ||| |||||||||||||||| |||||||    
T  17831604 gacactgacacgccgacaccgctaataatttgagaaaatca 17831564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 306
Target Start/End: Original strand, 47989464 - 47989559
Alignment:
Q  211 cggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    |||||| | |||||||||| |||||||||||| ||| | |  ||||||||| ||||||||| |||||| | |||||||| ||||||| || ||||||    
T  47989464 cggataccagacacgacacagacactgacacgccgaca-caataataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 47989559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 365
Target Start/End: Original strand, 51410031 - 51410144
Alignment:
Q  252 ctaataatttgaaaaaa-tca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgtccgacaccgaaatacacctaatccaaagag 349  Q
    ||||||||||||||||| ||| |||||| | |||||||| ||||||| || |||   | |||||| || ||||||||||| | || |||||||||| |||    
T  51410031 ctaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgg--acacgacacgtatccgacaccgagacacgcctaatccaaggag 51410128  T
Q  350 tgtccgtgcttcatag 365  Q
    | | ||||||||||||    
T  51410129 tattcgtgcttcatag 51410144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 1e-26; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 218 - 365
Target Start/End: Complemental strand, 33001375 - 33001229
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatg 316  Q
    ||||||| |||||| || ||||||| ||| || ||||||||||||||||||||| |||||| |||||||||||| ||||| || |||   | |||||| |    
T  33001375 cggacacaacacggtcaatgacacgccgacactgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtcgg--acacgacacg 33001278  T
Q  317 tgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    |||| ||||||||||||| |||||||||||||||||  |||||||||||    
T  33001277 tgtctgacaccgaaatacgcctaatccaaagagtgtttgtgcttcatag 33001229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 225 - 364
Target Start/End: Complemental strand, 17841668 - 17841530
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgtccga 323  Q
    |||||||||||||||||| ||| || ||||||||||||||||||||| |||||||| |||||||| ||||| | || ||  | | |||||||||||||||    
T  17841668 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgacggtgtc--ggacacgacatgtgtccga 17841571  T
Q  324 caccgaaatacacctaatccaaagagtgtccgtgcttcata 364  Q
    ||| || | || |||||||| | ||||||||||||||||||    
T  17841570 cactgagacacgcctaatccgaggagtgtccgtgcttcata 17841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 218 - 363
Target Start/End: Original strand, 12696297 - 12696446
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt---atacgac 313  Q
    ||||||||||||||||||||||||| ||| || ||||||||||||||||||| | |||||| | |||||||| ||||||| || ||||||   | |||||    
T  12696297 cggacacgacacggacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcagtgtcgtgtcggacacgac 12696396  T
Q  314 atgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcat 363  Q
    | ||||| |||||||  | |||||| |||||| ||||||| |||||||||    
T  12696397 acgtgtctgacaccgggacacaccttatccaaggagtgtctgtgcttcat 12696446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 218 - 365
Target Start/End: Original strand, 34595107 - 34595253
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatg 316  Q
    ||||||||||||||||| ||||||| ||| ||  |||||||||||||||||||| |||||| | |||||||| ||||||| || ||  | | |||||| |    
T  34595107 cggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc--ggacacgacacg 34595204  T
Q  317 tgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    |||| |||||||  | ||||||||||| | |||||||||||||||||||    
T  34595205 tgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 34595253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 7938089 - 7938168
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||||||||| ||||||||||||| ||| || ||||||||||||||||||||| |||||||| ||||||||||||||||    
T  7938089 cggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtc 7938168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 211 - 296
Target Start/End: Complemental strand, 426607 - 426521
Alignment:
Q  211 cggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||| ||||||||||||||||||||||||| ||| || | ||||||||||||||||||| |||||| |||||||||| |||||||    
T  426607 cggataccggacacgacacggacactgacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaattacaagtgtc 426521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 218 - 365
Target Start/End: Complemental strand, 8777059 - 8776908
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcg---tgtatacgac 313  Q
    ||||||||||||||||||||||||| ||| ||  |||||||||||||||||||| | |||| | |||||||| ||||||  || |||      | |||||    
T  8777059 cggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaattacaagtgttggtgtcggacacgacacgac 8776960  T
Q  314 atgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    | |||||||||||||| | ||||||||||| | |||||||||||||||||||    
T  8776959 acgtgtccgacaccgagacacacctaatccgaggagtgtccgtgcttcatag 8776908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 195 - 306
Target Start/End: Original strand, 3398569 - 3398680
Alignment:
Q  195 ctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagt 293  Q
    ||||||||||||||  |||| |||| |||||||||||||||||||||| ||| || |||||||||||| |||||||| |||||| | |||||||||||||    
T  3398569 ctatgaagcatggatacggacatcgaacacgacacggacactgacacgccgacacagctaataatttg-aaaaatcatataattcagtgtaattataagt 3398667  T
Q  294 gtctgtatcgtgt 306  Q
     || || ||||||    
T  3398668 atcggtgtcgtgt 3398680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 219 - 367
Target Start/End: Complemental strand, 7977915 - 7977768
Alignment:
Q  219 ggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgt 317  Q
    |||||||||| ||| ||||||||| ||| || ||||||||||||||||||| | |||||| | |||||||| ||||||| || ||  | | || |||| |    
T  7977915 ggacacgacatggatactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtc--ggacacaacatat 7977818  T
Q  318 gtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatagct 367  Q
    |||||||| ||||| || ||||||| || |||||| ||||||||||||||    
T  7977817 gtccgacaacgaaacacgcctaatctaaggagtgttcgtgcttcatagct 7977768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 366
Target Start/End: Original strand, 16766670 - 16766828
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt---------a 307  Q
    ||||||||||| ||||||||||||| ||| || ||||||||||||||||||||| |||||| | |||||||| ||||||| || ||||||         |    
T  16766670 cggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcgga 16766769  T
Q  308 tacgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatagc 366  Q
     || ||| |||||||||||||  | || |||||||| |||| |||||||||||||||||    
T  16766770 cacaacacgtgtccgacaccgggacacgcctaatccgaagaatgtccgtgcttcatagc 16766828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 220 - 364
Target Start/End: Original strand, 9658854 - 9658998
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtg 318  Q
    ||||||||||||||||||||||| ||| |||||||||||||| | ||||||| |||||| | ||||||||||  |||| || |  |  | |||||| |||    
T  9658854 gacacgacacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcggtgt--tagacacgacacgtg 9658951  T
Q  319 tccgacaccgaaatacacctaa-tccaaagagtgtccgtgcttcata 364  Q
    || ||||||| || || ||||| ||||| ||||||||||||||||||    
T  9658952 tctgacaccggaacacgcctaattccaaggagtgtccgtgcttcata 9658998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 353
Target Start/End: Complemental strand, 853945 - 853811
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatg 316  Q
    |||||||||||||||  |||||||| ||| ||  |||||||||||||||||||| |||||| | || ||||| ||||||| || ||  | ||||||||||    
T  853945 cggacacgacacggatgctgacacgccgacacaactaataatttgaaaaaatcacataattaagtgcaattacaagtgtcggtgtc--ggatacgacatg 853848  T
Q  317 tgtccgacaccgaaatacacctaatccaaagagtgtc 353  Q
    |||||||||  || | || |||||||||| |||||||    
T  853847 tgtccgacatagagacacgcctaatccaatgagtgtc 853811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 9027151 - 9027240
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||| | ||||| ||||||   |||||||||| ||||| || ||||||    
T  9027151 cggacacgacacggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtcgtgt 9027240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 9107456 - 9107367
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    ||||||||||||||||||| ||||| ||| || ||||||||||||||||||||| | |||| | |||||||| ||||||| || ||||||    
T  9107456 cggacacgacacggacactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcgtgt 9107367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 13851712 - 13851760
Alignment:
Q  221 acacgacacggacactgacacgtcgataccgctaataatttgaaaaaat 269  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||    
T  13851712 acacgacacggacactgacacgtcgacaccgctaataatttgagaaaat 13851760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 296
Target Start/End: Complemental strand, 17341746 - 17341671
Alignment:
Q  222 cacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||||| |||||||||| ||| |||| ||||||||||| ||||||| |||||| | ||||||||||||||||    
T  17341746 cacgacacgggcactgacacgccgacaccgttaataatttgataaaatcacataattcagtgtaattataagtgtc 17341671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 5732595 - 5732517
Alignment:
Q  219 ggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||||| ||||||||||||| ||| |||| ||||||||||| ||||||| ||| |||| |||||||||| |||||    
T  5732595 ggacacgacatggacactgacacgccgacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtgtc 5732517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 9629357 - 9629435
Alignment:
Q  219 ggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||||||||| | ||||||| ||| ||||| |||||||||| ||||||| |||||| |||||||||||| |||||    
T  9629357 ggacacgacacggatattgacacgccgacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtgtc 9629435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 296
Target Start/End: Original strand, 7086770 - 7086847
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||||| ||||| |||||||||  || ||||||||||||| ||||||| |||||||| |||||||||| |||||    
T  7086770 gacacgacacagacaccgacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaattatatgtgtc 7086847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 10294080 - 10294169
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatc-aataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    ||||||||||||||| ||||||| | |||||||||||||||||||| | ||||  ||| || |||||||||||| ||||| || ||||||    
T  10294080 cggacacgacacggatactgacatgccgataccgctaataatttgagataatcgcatatttcaatgtaattatatgtgtcggtgtcgtgt 10294169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 10770760 - 10770671
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    ||||||||||| ||||||||||||| | | ||  |||||||||||||||||||| |||||| | |||||||| ||||||| || ||||||    
T  10770760 cggacacgacatggacactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 10770671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 364
Target Start/End: Original strand, 31959132 - 31959268
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatg 316  Q
    |||||| |||||| ||||||||||| ||  || ||||||||||||||||||||| |||||  | |||||||| ||||||| |           |||||||    
T  31959132 cggacatgacacgaacactgacacgccgtcacagctaataatttgaaaaaatcacataatgcagtgtaattacaagtgtcgg-----------cgacatg 31959220  T
Q  317 tgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcata 364  Q
    ||||||||||||  | ||||||||||| | ||||||||||||||||||    
T  31959221 tgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 31959268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 195 - 306
Target Start/End: Complemental strand, 8365628 - 8365516
Alignment:
Q  195 ctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagt 293  Q
    |||||||||| |||  |||| | | ||||||||||||||||||||||| ||| ||  ||||||||||||||| |||| ||||||   |||||||| ||||    
T  8365628 ctatgaagcacggatacggacaccagacacgacacggacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagt 8365529  T
Q  294 gtctgtatcgtgt 306  Q
    ||| || ||||||    
T  8365528 gtcggtgtcgtgt 8365516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 16388311 - 16388245
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataa 291  Q
    ||||||||||||||||||||||||  || |||||||||||||||||| |||||| | |||||||||||    
T  16388311 gacacggacactgacacgtcgata-agcaaataatttgaaaaaatcacataattcagtgtaattataa 16388245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 16833281 - 16833360
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||||||| |||||||||||| ||| ||  |||||||||||||||||||| ||| || | |||||||| |||||||    
T  16833281 cggacacgacacagacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaattacaagtgtc 16833360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 296
Target Start/End: Original strand, 6389693 - 6389795
Alignment:
Q  195 ctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagt 293  Q
    |||||||||| |||| | || | ||||||||||||||||||| ||||| ||| || | ||||||||||| ||||| | |||||||| |||||| ||| ||    
T  6389693 ctatgaagcacggacacagacaccggacacgacacggacactcacacgccgacacggataataatttgagaaaatgatataatttagtgtaatcataggt 6389792  T
Q  294 gtc 296  Q
    |||    
T  6389793 gtc 6389795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 8805656 - 8805586
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattat 289  Q
    |||||||||| ||||| |||||||||  || ||||||||||||| ||||||| |||||||| |||||||||    
T  8805656 gacacgacacagacaccgacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaattat 8805586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 296
Target Start/End: Original strand, 10842518 - 10842584
Alignment:
Q  231 gacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||| |||||| ||| |||||||||||||||||||||||| |||||||| |||||| ||| |||||    
T  10842518 gacacggacacgccgacaccgctaataatttgaaaaaatcacataatttagtgtaatcatatgtgtc 10842584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 19040341 - 19040407
Alignment:
Q  234 actgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgt 299  Q
    ||||||||| ||| |||||||||||||||| ||||||| |||||| | |||||||||| ||||||||    
T  19040341 actgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtctgt 19040407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 365
Target Start/End: Original strand, 28152079 - 28152217
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgtccga 323  Q
    |||||||||||||||||| ||| |  |||||||||||| |||||||| |||||| | |||||||| ||||||| || ||  | | |||||| ||||||||    
T  28152079 gacacggacactgacacgccgacaaagctaataatttg-aaaaatcacataattcagtgtaattacaagtgtcggtgtc--ggacacgacacgtgtccga 28152175  T
Q  324 caccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    |||||  | |  |||||||| | |||||| ||||||||||||    
T  28152176 caccgggacaggcctaatccgaggagtgttcgtgcttcatag 28152217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 5000712 - 5000659
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    |||||| |||||||| ||||||||||||| ||||||||||||| || |||||||    
T  5000712 cggacatgacacggatactgacacgtcgacaccgctaataattcgagaaaatca 5000659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 15489816 - 15489739
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||| ||||||||||| ||||||||| ||  |||||||||||||||||| | | |||| |||||||||| |||||||    
T  15489816 gacacaacacggacactaacacgtcgacacaactaataatttgaaaaaattacacaattcaatgtaattacaagtgtc 15489739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 306
Target Start/End: Complemental strand, 21395386 - 21395305
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatcaataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    |||| |||||| |||||| | | |||||||||||||||| |||||  |||||||| |||||||| ||||||| || ||||||    
T  21395386 gacatggacaccgacacgccaacaccgctaataatttgagaaaatacataatttagtgtaattacaagtgtcggtgtcgtgt 21395305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 296
Target Start/End: Complemental strand, 7265668 - 7265600
Alignment:
Q  229 cggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||||||||| | | |||||||||||||||| ||||||| |||||| | |||||||||| |||||    
T  7265668 cggacactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtc 7265600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 290
Target Start/End: Original strand, 7625088 - 7625168
Alignment:
Q  211 cggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattata 290  Q
    |||| |||||||||||||| ||||| |||||||||| || | ||||||||||| ||||| | |||||||| | ||||||||    
T  7625088 cggacatcggacacgacacagacaccgacacgtcgacacggataataatttgagaaaatgatataatttagtataattata 7625168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 17302638 - 17302690
Alignment:
Q  316 gtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatagcta 368  Q
    |||||||||| || || |||||||||||||||| |||||||| ||||||||||    
T  17302638 gtgtccgacatcggaacacacctaatccaaagaatgtccgtgtttcatagcta 17302690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 296
Target Start/End: Complemental strand, 20371189 - 20371117
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||||| ||||||| ||| |||||||||||||||| ||||||| |||| | ||||| |||||| |||||    
T  20371189 gacacggacattgacacgccgacaccgctaataatttgagaaaatcacataactcaatgtgattatatgtgtc 20371117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 364
Target Start/End: Original strand, 31384927 - 31385048
Alignment:
Q  252 ctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt--------atacgacatgtgtccgacaccgaaatacacctaatc 342  Q
    |||||||||||||||||||| |||||| | |||||||| ||||||| || ||||||        | |||||| |||||| ||||||  | || |||||||    
T  31384927 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtagtgttggacacgacacgtgtcctacaccgggacacgcctaatc 31385026  T
Q  343 caaagagtgtccgtgcttcata 364  Q
    ||| ||||||||||||||||||    
T  31385027 caaggagtgtccgtgcttcata 31385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 2117050 - 2117128
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||||||||||| | || |||||  ||| ||| |||||||||||||||||||| |||||| |||| |||||||||||||    
T  2117050 cggacacgacacg-atacggacactccgacacctctaataatttgaaaaaatcacataattcaatgcaattataagtgtc 2117128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 225 - 295
Target Start/End: Complemental strand, 10889053 - 10888982
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgt 295  Q
    ||||||||||| ||||| | || |||||||||||||||| ||||||| |||||||| ||| |||||| ||||    
T  10889053 gacacggacaccgacacatagacaccgctaataatttgataaaatcacataatttagtgtgattatatgtgt 10888982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 30866230 - 30866151
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||| ||||| ||||| |||||  | | |||||||||||||||| ||||||| |||||| |||||||||||| |||||    
T  30866230 cggacatgacactgacaccgacacaccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgtc 30866151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 295
Target Start/End: Complemental strand, 4118419 - 4118341
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgt 295  Q
    ||||||||||||| | | | ||||| |||||  | ||||||||||||||||||| |||||| |||||||||| ||||||    
T  4118419 cggacacgacacgtatattaacacgacgatatagttaataatttgaaaaaatcacataattaaatgtaattacaagtgt 4118341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 295
Target Start/End: Original strand, 17435172 - 17435250
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgt 295  Q
    |||| |||||||||||||||| ||||||| |  ||||||||||| ||||||| | |||||| | |||||||| ||||||    
T  17435172 cggatacgacacggacactgatacgtcgacatagctaataattttaaaaaattacataattcagtgtaattacaagtgt 17435250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 365
Target Start/End: Original strand, 7490124 - 7490153
Alignment:
Q  336 cctaatccaaagagtgtccgtgcttcatag 365  Q
    ||||||||||||||||||||||||||||||    
T  7490124 cctaatccaaagagtgtccgtgcttcatag 7490153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 287
Target Start/End: Original strand, 24614404 - 24614453
Alignment:
Q  239 cacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaatt 287  Q
    ||||||||||||||||||||||| ||||||| | |||||||| |||||||    
T  24614404 cacgtcgataccgctaataatttaaaaaaattatataatttagtgtaatt 24614453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 306
Target Start/End: Complemental strand, 25038181 - 25038068
Alignment:
Q  194 tctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataag 292  Q
    ||||||||||| |||  |||| || | | ||||||| || |||||||||| || |||| ||||||||||| ||||| | |||||||| |||||||| ||     
T  25038181 tctatgaagcacggatacggacattgaatacgacacagatactgacacgttgacaccgttaataatttgagaaaattacataatttagtgtaattacaaa 25038082  T
Q  293 tgtctgtatcgtgt 306  Q
    |||| |||| ||||    
T  25038081 tgtcggtattgtgt 25038068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 3209355 - 3209434
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttg-aaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||||||||||| |||| |||||| ||| || |||||||||||| ||||||||| |||||||| ||| |||| |||||||    
T  3209355 cggacacgacacg-acacagacacgccgacacagctaataatttgaaaaaaatcacataatttagtgttattacaagtgtc 3209434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 7938170 - 7938222
Alignment:
Q  316 gtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatagcta 368  Q
    |||||||||||||| | || ||| |||| | ||||||||||||||||||||||    
T  7938170 gtgtccgacaccgagacacgcctgatccgaggagtgtccgtgcttcatagcta 7938222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 365
Target Start/End: Complemental strand, 13360361 - 13360313
Alignment:
Q  317 tgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    |||||||||| || | || |||||||| |||||||||||||||||||||    
T  13360361 tgtccgacactgagacacgcctaatccgaagagtgtccgtgcttcatag 13360313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 365
Target Start/End: Complemental strand, 17327748 - 17327590
Alignment:
Q  211 cggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt--- 306  Q
    |||||| |||||||||||  |||| ||| ||| ||| ||  |||| | ||||| ||||||| |||||||| ||||| |||| ||||| || ||||||       
T  17327748 cggataccggacacgacatagacagtgatacgccgacacaactaagattttgagaaaatcacataatttagtgtaactatatgtgtcagtgtcgtgtcgg 17327649  T
Q  307 atacgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    | |||||| ||||| ||||| |  | || |||||||| | |||||||||||||||||||    
T  17327648 acacgacacgtgtctgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 17327590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 290
Target Start/End: Complemental strand, 34073432 - 34073360
Alignment:
Q  219 ggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatc-aataatttaatgtaattata 290  Q
    |||||||||||||||||||||| | | | | |||||||||||||| ||||||  |||||| | ||||||||||    
T  34073432 ggacacgacacggacactgacatgccaacatcgctaataatttgagaaaatctcataattcagtgtaattata 34073360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 333 - 365
Target Start/End: Original strand, 34446658 - 34446690
Alignment:
Q  333 acacctaatccaaagagtgtccgtgcttcatag 365  Q
    ||||||||||||| |||||||||||||||||||    
T  34446658 acacctaatccaaggagtgtccgtgcttcatag 34446690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 4e-26; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 218 - 368
Target Start/End: Original strand, 55401048 - 55401197
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatg 316  Q
    |||| |||||||||||||||| ||| ||| ||  |||||||||||||||||||| |||||||| |||||||| ||||||| || |||   | |||||| |    
T  55401048 cggatacgacacggacactgatacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgg--acacgacacg 55401145  T
Q  317 tgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatagcta 368  Q
    ||||||||||||| | || |||||||| | ||||||||||||||||||||||    
T  55401146 tgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatagcta 55401197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 218 - 363
Target Start/End: Original strand, 28917974 - 28918120
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatg 316  Q
    ||||||||||||||| ||||||||| ||| |  ||||||||||||||||||||| |||||| | |||||||| ||||||| || ||||| | |||||| |    
T  28917974 cggacacgacacggaaactgacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtggacacgacacg 28918073  T
Q  317 tgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcat 363  Q
    |||||||||| |  | || |||||||||| |||||||| ||||||||    
T  28918074 tgtccgacactgggacacgcctaatccaaggagtgtccctgcttcat 28918120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 296
Target Start/End: Original strand, 8383206 - 8383309
Alignment:
Q  194 tctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataag 292  Q
    |||||| |||| |||| |||| |  |||||||||||||||| ||||||| ||| |||||||||||||||| ||||||| |||||| | ||||||||||||    
T  8383206 tctatgtagcacggacacggacactggacacgacacggacattgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataag 8383305  T
Q  293 tgtc 296  Q
    ||||    
T  8383306 tgtc 8383309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 368
Target Start/End: Complemental strand, 15796394 - 15796220
Alignment:
Q  204 atggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatc 302  Q
    |||||| |||| | ||||||||||||||||| ||||||| ||| || | ||||||||||||||||||| |||||| | |||||||| || |||| || ||    
T  15796394 atggacacggacaccggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtc 15796295  T
Q  303 gtgt---------atacgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatagcta 368  Q
    ||||         | || ||| |||||| |||||| || || ||||||||||||||||| |||||||||||||||    
T  15796294 gtgtaggtgtcggacacaacacgtgtccaacaccggaacacgcctaatccaaagagtgttcgtgcttcatagcta 15796220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 225 - 295
Target Start/End: Complemental strand, 25948966 - 25948895
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgt 295  Q
    |||||||||||||||| | |||||| ||||||||||||||||||||| |||||| | |||||||||||||||    
T  25948966 gacacggacactgacatgccgatacggctaataatttgaaaaaatcacataattcagtgtaattataagtgt 25948895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 25064882 - 25064954
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattat 289  Q
    |||||||||||| |||| ||||||| ||| ||||||||| |||||||||||||| |||||||| |||||||||    
T  25064882 cggacacgacacagacattgacacgccgacaccgctaatgatttgaaaaaatcacataatttagtgtaattat 25064954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 306
Target Start/End: Original strand, 14216867 - 14216954
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    ||||||||||||||||||||||||||| ||  |||||||||| |||| |||| |||||| | |||||||| ||||||| || ||||||    
T  14216867 gacacgacacggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgt 14216954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 306
Target Start/End: Original strand, 14222996 - 14223083
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    ||||||||||||||||||||||||||| ||  |||||||||| |||| |||| |||||| | |||||||| ||||||| || ||||||    
T  14222996 gacacgacacggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgt 14223083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 223 - 296
Target Start/End: Complemental strand, 10268567 - 10268493
Alignment:
Q  223 acgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||| ||||||||||||| ||| || | ||||||||||||||||||| |||||||| |||||||| |||||||    
T  10268567 acgacatggacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtgtaattacaagtgtc 10268493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 3164111 - 3164058
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    ||||||||||||||||| || |||||||| || |||||||||||||||||||||    
T  3164111 cggacacgacacggacaatggcacgtcgacacagctaataatttgaaaaaatca 3164058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 26492291 - 26492238
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    ||||||||||||||||||||||||| ||| |  |||||||||||||||||||||    
T  26492291 cggacacgacacggacactgacacgccgacagagctaataatttgaaaaaatca 26492238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 227 - 306
Target Start/End: Original strand, 14832081 - 14832161
Alignment:
Q  227 cacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    |||||| || |||||| |||||| ||||||||||||||||||||| |||| | |||||||||| ||||||| || ||||||    
T  14832081 cacggatacggacacgccgatacagctaataatttgaaaaaatcacataactcaatgtaattacaagtgtcagtgtcgtgt 14832161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 8587107 - 8587028
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||| |||||||||||||||||| ||| ||  ||| |||||||||||||||| |||||| | |||||||| |||||||    
T  8587107 cggacatgacacggacactgacacgccgacacatctagtaatttgaaaaaatcacataattaagtgtaattacaagtgtc 8587028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 10335372 - 10335293
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||||||||||||||||||||||| ||| ||  |||||||||||||||| ||| ||| |||| ||||| || |||||||    
T  10335372 cggacacgacacggacactgacacgccgacacaactaataatttgaaaaagtcacatattttagtgtaaatacaagtgtc 10335293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 23870635 - 23870592
Alignment:
Q  228 acggacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  23870635 acggacacggacacgtcgacaccgctaataatttgaaaaaatca 23870592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 24205127 - 24205048
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||||||||||||||||||||||| ||| || | ||||||||||| ||||| | |||||  | ||||||||||||||||    
T  24205127 cggacacgacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtc 24205048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 38731191 - 38731270
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||||||||| | |||| |||| |||||||||||||||||||| ||||||||| |||||| | |||| ||||| |||||    
T  38731191 cggacacgacatgtacaccgacatgtcgataccgctaataattttaaaaaatcacataattcagtgtagttatatgtgtc 38731270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 251 - 366
Target Start/End: Original strand, 27505252 - 27505371
Alignment:
Q  251 gctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtat---acgacatgtgtccgacaccgaaatacacctaatccaaa 346  Q
    |||||||||||  |||||||| |||||| | |||||||| ||||||| || |||||| |   |||||| |||||||||||||  | |  |||||||| |     
T  27505252 gctaataatttttaaaaatcacataattaagtgtaattacaagtgtcggtgtcgtgtctgacacgacacgtgtccgacaccgggacatgcctaatccgag 27505351  T
Q  347 gagtgtccgtgcttcatagc 366  Q
    ||||||||||||||||||||    
T  27505352 gagtgtccgtgcttcatagc 27505371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 49505230 - 49505161
Alignment:
Q  228 acggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||| ||||||  || |||||||||||||||| ||||||| |||||||| |||||||||| |||||    
T  49505230 acggacaccgacacgcagagaccgctaataatttgagaaaatcacataatttagtgtaattatatgtgtc 49505161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 4987363 - 4987299
Alignment:
Q  232 acactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgt 295  Q
    ||||||||||| ||| || ||||||||||||||||||||| |||||| | |||||||| ||||||    
T  4987363 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 4987299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 5441117 - 5441045
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattat 289  Q
    |||||||||||| |||||||||||| ||  |||||||| ||||||| ||||||| |||||| |||| ||||||    
T  5441117 cggacacgacacagacactgacacgccgtcaccgctaaaaatttgagaaaatcacataattcaatggaattat 5441045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 306
Target Start/End: Original strand, 9800014 - 9800102
Alignment:
Q  219 ggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    |||||||||||| ||||||||||| ||| ||| |||||||||||| ||||| | ||||||   ||||||| |||||||| || ||||||    
T  9800014 ggacacgacacgtacactgacacgccgacacctctaataatttgagaaaattacataattccgtgtaattgtaagtgtcggtgtcgtgt 9800102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 296
Target Start/End: Original strand, 29508424 - 29508496
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||| ||||| ||||||  ||||||| |||||||||||||||||||| |||||| | |||||||||| |||||    
T  29508424 gacatggacattgacacaccgataccactaataatttgaaaaaatcatataattcagtgtaattatatgtgtc 29508496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 32804622 - 32804546
Alignment:
Q  222 cacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtct 297  Q
    |||||||||| || ||||| | ||| |||| ||||||||||| ||||||| |||||||| |||||||||| ||||||    
T  32804622 cacgacacgggcattgacatgccgacaccgttaataatttgagaaaatcacataatttagtgtaattatatgtgtct 32804546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 3865635 - 3865592
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaa 268  Q
    |||||||||||||||||| ||| || ||||||||||||||||||    
T  3865635 gacacggacactgacacgccgacacagctaataatttgaaaaaa 3865592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 225 - 296
Target Start/End: Complemental strand, 10318113 - 10318042
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatcaataatttaatgtaattataagtgtc 296  Q
    |||||||||||||||||| ||| || ||||||||||||||||| |||    |||| ||||| ||||||||||    
T  10318113 gacacggacactgacacgccgacacagctaataatttgaaaaagtcacatttttagtgtaaatataagtgtc 10318042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 224 - 290
Target Start/End: Complemental strand, 11493441 - 11493374
Alignment:
Q  224 cgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattata 290  Q
    ||||||||||| ||||||||||| ||| |||||||| ||| ||||||| |||||| | ||||||||||    
T  11493441 cgacacggacattgacacgtcgacaccactaataatgtgagaaaatcacataattcagtgtaattata 11493374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 365
Target Start/End: Original strand, 18426932 - 18427068
Alignment:
Q  228 acggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgtccgacac 326  Q
    |||||||| |||||| ||| ||| |||||||||| ||||||||| ||||||   ||||||||||  |||| || |||   |||||||| ||||||| |||    
T  18426932 acggacacggacacgccgacaccactaataatttcaaaaaatcacataattcggtgtaattatatatgtcggtgtcgg--atacgacacgtgtccggcac 18427029  T
Q  327 cgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    ||  | ||||||||||  | ||||||||||| |||||||    
T  18427030 cgggacacacctaatctgaggagtgtccgtgtttcatag 18427068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 26508083 - 26508162
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||||||| || || |||||||||  || || ||||||||||||||||||||| |||||| | |||||||| |||||||    
T  26508083 cggacacgatacagatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtc 26508162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 1509545 - 1509591
Alignment:
Q  251 gctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||||||||||||||||||| |||||||| |||||||| |||||||    
T  1509545 gctaataatttgaaaaaatcacataatttagtgtaattacaagtgtc 1509591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 296
Target Start/End: Original strand, 1514603 - 1514669
Alignment:
Q  231 gacactgacacgtcgataccgctaataatttgaaa-aaatcaataatttaatgtaattataagtgtc 296  Q
    ||||| |||||| ||| |||||||||||||||||| |||   |||||||| ||||||||||||||||    
T  1514603 gacacggacacgccgacaccgctaataatttgaaagaaacgcataatttagtgtaattataagtgtc 1514669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 4466711 - 4466633
Alignment:
Q  193 ttctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    ||||||||||||||||  |||| | |||||| |||||| ||||||||||  ||| |||| ||||||||| | |||||||    
T  4466711 ttctatgaagcatggatacggacaccggacatgacacgaacactgacactccgacaccggtaataatttaagaaaatca 4466633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 271
Target Start/End: Complemental strand, 6525759 - 6525713
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    |||||| ||||||||| ||||| |||||||||||||||| |||||||    
T  6525759 gacacgtacactgacatgtcgacaccgctaataatttgagaaaatca 6525713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 287
Target Start/End: Original strand, 14979154 - 14979224
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaatt 287  Q
    ||||||||||| ||||| || |||| ||| || ||||||||||||||||||||| |||||| | |||||||    
T  14979154 cggacacgacaaggacaatggcacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatt 14979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 365
Target Start/End: Complemental strand, 34185106 - 34185052
Alignment:
Q  311 gacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    ||||||||||||||||||  | || |||||||| | |||||||||||||||||||    
T  34185106 gacatgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 34185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 2620139 - 2620086
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    |||||||||| |||||||||||||| ||| ||| ||||| |||||| |||||||    
T  2620139 cggacacgactcggacactgacacgccgacaccactaatcatttgagaaaatca 2620086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 7928453 - 7928502
Alignment:
Q  248 accgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||||||||||||||||||| |||||| | |||||||||| |||||    
T  7928453 accgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtc 7928502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 11665917 - 11666006
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    ||||||||||||  ||||| ||||  ||| | |||||||||||||| ||||||| | |||||| |||||||||| ||||| || ||||||    
T  11665917 cggacacgacacacacactaacacaccgacaacgctaataatttgataaaatcacacaatttagtgtaattatatgtgtcggtgtcgtgt 11666006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 306
Target Start/End: Original strand, 14747547 - 14747624
Alignment:
Q  231 gacactgacacgtcgataccgctaataatttg-aaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    |||||||||||| ||| || |||||||||||| ||||||||| |||||||| |||||||| ||| ||| || ||||||    
T  14747547 gacactgacacgccgacacagctaataatttgaaaaaaatcacataatttagtgtaattacaagggtccgtgtcgtgt 14747624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 267
Target Start/End: Original strand, 14829663 - 14829712
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaa 267  Q
    |||||| ||||| |||||||||||| ||| || |||||||||||||||||    
T  14829663 cggacatgacacagacactgacacgccgacacagctaataatttgaaaaa 14829712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 365
Target Start/End: Complemental strand, 40993409 - 40993275
Alignment:
Q  231 gacactgacacgtcgataccgctaataattt-gaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgtccgacaccg 328  Q
    ||||| ||||| |||| ||||||||||||||  ||||||||| |||||| | |||||||||| ||||| || ||  | | ||||||  ||||||||||||    
T  40993409 gacacggacacctcgacaccgctaataatttaaaaaaaatcacataattcagtgtaattatatgtgtcggtgtc--ggacacgacacatgtccgacaccg 40993312  T
Q  329 aaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
      | || |||||||| | |||||||| ||||||||||    
T  40993311 ggacacgcctaatccgaggagtgtccatgcttcatag 40993275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 296
Target Start/End: Complemental strand, 4991050 - 4990974
Alignment:
Q  221 acacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||||||| ||||||||  ||| |||||||||| ||||| ||||| | |||||| | |||||||| |||||||    
T  4991050 acacgacacggagactgacactccgacaccgctaatagtttgagaaaattacataattcagtgtaattacaagtgtc 4990974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 296
Target Start/End: Original strand, 10954932 - 10955004
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||| ||||||||||| ||| ||  |||||||||||||||||||| |||||| | |||||| | |||||||    
T  10954932 gacacgaacactgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatcacaagtgtc 10955004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 12674585 - 12674533
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatcaa 272  Q
    ||||||||||||||| ||||||  ||| || ||||||||||||| ||||||||    
T  12674585 gacacgacacggacattgacacaccgacactgctaataatttgagaaaatcaa 12674533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 365
Target Start/End: Original strand, 14209187 - 14209243
Alignment:
Q  309 acgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    |||||| |||| ||||| ||  |||||||||||||||  ||||||||||||||||||    
T  14209187 acgacacgtgtacgacatcgggatacacctaatccaagaagtgtccgtgcttcatag 14209243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 15544679 - 15544719
Alignment:
Q  231 gacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    ||||||||||||| || |||||||||||||||| |||||||    
T  15544679 gacactgacacgttgacaccgctaataatttgataaaatca 15544719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 336 - 364
Target Start/End: Original strand, 15864922 - 15864950
Alignment:
Q  336 cctaatccaaagagtgtccgtgcttcata 364  Q
    |||||||||||||||||||||||||||||    
T  15864922 cctaatccaaagagtgtccgtgcttcata 15864950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 367
Target Start/End: Original strand, 17276792 - 17276848
Alignment:
Q  311 gacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatagct 367  Q
    |||| |||||||||||||| |  |||||||||| |  ||||||||||||||||||||    
T  17276792 gacacgtgtccgacaccgagacgcacctaatccgagaagtgtccgtgcttcatagct 17276848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 21479104 - 21479144
Alignment:
Q  231 gacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    |||||||||||| ||| || |||||||||||||||||||||    
T  21479104 gacactgacacgccgacacagctaataatttgaaaaaatca 21479144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 40052318 - 40052358
Alignment:
Q  231 gacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    |||||||||||| ||| || |||||||||||||||||||||    
T  40052318 gacactgacacgccgacacagctaataatttgaaaaaatca 40052358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 49651839 - 49651783
Alignment:
Q  251 gctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    ||||||||||||||||||||| |||||| | |||||||| ||||||| || ||||||    
T  49651839 gctaataatttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcgtgt 49651783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 218 - 365
Target Start/End: Original strand, 8771 - 8917
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatg 316  Q
    ||||||||||||||||||||||||| ||| || ||||||||||||||||||||| || ||||| |||||||| ||||||| || ||  | | |||||| |    
T  8771 cggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgtcggtgtc--ggacacgacacg 8868  T
Q  317 tgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    ||||||||||||| | || |||||||  | |||| ||||||||||||||    
T  8869 tgtccgacaccgagacacgcctaatctgaggagtctccgtgcttcatag 8917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 4e-23; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 218 - 367
Target Start/End: Original strand, 22651949 - 22652108
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt---------a 307  Q
    ||||||||||||||||||||||||| ||| || ||||||||||||||||||||| |||||| ||| |||||| ||||||| || ||||||         |    
T  22651949 cggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcgtgtcggtgtcgga 22652048  T
Q  308 tacgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatagct 367  Q
     ||||||||||||||||||||  | ||  ||||||| | |||||||||||||||||||||    
T  22652049 cacgacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatagct 22652108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 219 - 306
Target Start/End: Complemental strand, 2572141 - 2572053
Alignment:
Q  219 ggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    |||||||||||||| || |||||||||| ||  |||||||||||||||||||| |||||||| |||||||| ||||||| || ||||||    
T  2572141 ggacacgacacggataccgacacgtcgacacacctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgt 2572053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 195 - 365
Target Start/End: Original strand, 8342930 - 8343086
Alignment:
Q  195 ctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagt 293  Q
    |||||||||| |||| |||| |||||||||||||| ||||| ||||      ||  ||||||||||||||||||||| |||||||| |||||||| ||||    
T  8342930 ctatgaagcacggacacggacatcggacacgacactgacaccgaca------ta--gctaataatttgaaaaaatcacataatttagtgtaattacaagt 8343021  T
Q  294 gtctgtatcgtgtatacgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    ||| || ||||       |||||||||||||||||  | || |||||||| ||||||||| |||||||||||    
T  8343022 gtcggtgtcgt-------acatgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatag 8343086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 228 - 306
Target Start/End: Complemental strand, 15816205 - 15816126
Alignment:
Q  228 acggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    ||||||||||||||| ||| ||  |||||||||||||||||||| |||||||| |||||||||||||||| || ||||||    
T  15816205 acggacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgt 15816126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 20873042 - 20873121
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||||||||||||||||||||||| ||| |  | ||||||||||||||||||| |||||||| |||||||| |||||||    
T  20873042 cggacacgacacggacactgacacgccgacatagataataatttgaaaaaatcacataatttagtgtaattacaagtgtc 20873121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 221 - 295
Target Start/End: Original strand, 36934646 - 36934721
Alignment:
Q  221 acacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgt 295  Q
    |||||||||||||||| ||||||||| ||||||||||||| |||||||||| |||||| | |||||||||| ||||    
T  36934646 acacgacacggacactaacacgtcgacaccgctaataattcgaaaaaatcacataattcattgtaattatatgtgt 36934721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 29510390 - 29510337
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    ||||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  29510390 cggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatca 29510337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 4298972 - 4298893
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||||||| || ||| ||||| ||| || | ||||||||||||||||||| ||||||||||||||||| |||||||    
T  4298972 cggacacgacacagatactaacacgccgacacagttaataatttgaaaaaatcacataatttaatgtaattacaagtgtc 4298893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 216 - 365
Target Start/End: Original strand, 8343287 - 8343446
Alignment:
Q  216 atcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgt----gt---- 306  Q
    |||||||||||||| ||||| |||||  ||| |  ||||||||||||||||||||| |||||||| |||||||| ||||||| || ||||    ||        
T  8343287 atcggacacgacactgacaccgacacaccgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtcgtacacgtgtcc 8343386  T
Q  307 -atacgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
     | |||||| |||||||||||||  | || |||||||| ||||||||| |||||||||||    
T  8343387 gacacgacacgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatag 8343446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 211 - 296
Target Start/End: Complemental strand, 25192440 - 25192354
Alignment:
Q  211 cggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||||| | | |||||| | | ||||||||||||||    
T  25192440 cggacatcggacacgatacggacactgacacgccgacacagctaataatttgaaaaagtgacataattcagtataattataagtgtc 25192354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 13437074 - 13436997
Alignment:
Q  194 tctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    ||||||||||| ||||  ||| | |||||| |||| ||||||||||||| ||| || |||||||||||||||||||||    
T  13437074 tctatgaagcacggacatggacaccggacatgacatggacactgacacgccgacacagctaataatttgaaaaaatca 13436997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 34897068 - 34897137
Alignment:
Q  228 acggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||| |||||||||| |||||||||||||||| ||||||| |||||| | |||||||||| |||||    
T  34897068 acggacacagacacgtcgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtc 34897137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 4673518 - 4673458
Alignment:
Q  211 cggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    |||| |||||||||||||| |||||||||||| ||| || | |||||||||||||||||||    
T  4673518 cggacatcggacacgacacagacactgacacgccgacacagataataatttgaaaaaatca 4673458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 22197828 - 22197749
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||||||| |||||| ||||| | | || ||||||||||||||||| ||| |||||||| |||||||| |||||||    
T  22197828 cggacacgacacagacactaacacgccaacacagctaataatttgaaaaattcacataatttagtgtaattacaagtgtc 22197749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 41838207 - 41838156
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    ||||||| ||||||||||||||||||| || ||||||||||| |||||||||    
T  41838207 gacacgatacggacactgacacgtcgacacagctaataatttaaaaaaatca 41838156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 368
Target Start/End: Complemental strand, 36450833 - 36450691
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgtccga 323  Q
    |||||||||||||||||| ||| ||  |||||||||||||||||||| | |||| | |||||||| ||||||  || ||  | | |||||  ||||||||    
T  36450833 gacacggacactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaattacaagtgtaggtgtc--ggacacgacgcgtgtccga 36450736  T
Q  324 caccgaaatacacctaatccaaagagtgtccgtgcttcatagcta 368  Q
    ||||   | || |||||||| | ||||||| ||||||||||||||    
T  36450735 caccaggacacgcctaatccgaggagtgtctgtgcttcatagcta 36450691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 290
Target Start/End: Original strand, 3677752 - 3677832
Alignment:
Q  211 cggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattata 290  Q
    |||||||| ||||||||||||| |||||||| |||| ||   ||||||||| ||||||||| ||||||  |||||||||||    
T  3677752 cggatatcagacacgacacggatactgacacatcgacacaattaataattttaaaaaatcacataattctatgtaattata 3677832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 299
Target Start/End: Complemental strand, 20785521 - 20785469
Alignment:
Q  248 accgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgt 299  Q
    ||||||||||||||||  |||||| ||||||||||||||||||| ||||||||    
T  20785521 accgctaataatttgaggaaatcacataatttaatgtaattatatgtgtctgt 20785469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 28642358 - 28642430
Alignment:
Q  195 ctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaa 267  Q
    |||||||||| |||  |||| ||||||||||||||||||| |||||| | || || | |||||||||||||||    
T  28642358 ctatgaagcacggatacggacatcggacacgacacggacaatgacacattgacacggttaataatttgaaaaa 28642430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 29357949 - 29358029
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataa-tttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||||||  |||||||| |||||||||| | |||||| ||||||||| ||| ||||||||||||| ||||| |||||    
T  29357949 cggacacgacatagacactgatacgtcgatactgttaataattttgaaaaactcacataatttaatgtatttatatgtgtc 29358029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 290
Target Start/End: Complemental strand, 39954352 - 39954292
Alignment:
Q  231 gacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattata 290  Q
    ||||| |||||| ||| |||||||||||||||| ||||||| |||||||| ||||||||||    
T  39954352 gacaccgacacgccgacaccgctaataatttgagaaaatcacataatttagtgtaattata 39954292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 283 - 361
Target Start/End: Original strand, 4498342 - 4498418
Alignment:
Q  283 taattataagtgtctgtatcgtgtatacgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttc 361  Q
    |||||||||||||| || |||  ||||  |||||| ||||||||||||| ||||||||||  | |||||||||||||||    
T  4498342 taattataagtgtcggtgtcgaatata--acatgtatccgacaccgaaacacacctaatcagaggagtgtccgtgcttc 4498418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 220 - 286
Target Start/End: Original strand, 13018256 - 13018323
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaat 286  Q
    ||||| |||| |||||| ||||||| |||||| ||||||||||| ||||||| |||||||| ||||||    
T  13018256 gacacaacacagacactaacacgtcaataccgttaataatttgacaaaatcacataatttagtgtaat 13018323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 24362288 - 24362209
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||| ||||||| ||||| |||||| ||| |||||||||||||||| | ||||| |||||| | |||||||||| |||||    
T  24362288 cggatacgacacagacaccgacacgccgacaccgctaataatttgagagaatcacataattcagtgtaattatatgtgtc 24362209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 296
Target Start/End: Original strand, 24669379 - 24669485
Alignment:
Q  190 gaattctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaatta 288  Q
    ||||||||| |||||||||  |||| | |||||||||||| ||||||||||||  || |||| |||||||||||  |||| | |||||| | ||||||||    
T  24669379 gaattctataaagcatggatacggaca-cggacacgacacagacactgacacgctgacaccgttaataatttgaggaaattacataattcagtgtaatta 24669477  T
Q  289 taagtgtc 296  Q
     |||||||    
T  24669478 caagtgtc 24669485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 27101500 - 27101566
Alignment:
Q  230 ggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||| ||||||| ||| |||||||||||||||||||||||| |||||||| || ||||||| |||||    
T  27101500 ggacattgacacgccgacaccgctaataatttgaaaaaatcacataatttagtg-aattataggtgtc 27101566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 27213520 - 27213599
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||||||||||||| || |||||| ||| || ||||||||||| | ||||||| |||||| | |||||||||| |||||    
T  27213520 cggacacgacacggatacagacacgccgacactgctaataatttcagaaaatcacataattcactgtaattatatgtgtc 27213599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 225 - 272
Target Start/End: Complemental strand, 31109597 - 31109550
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatcaa 272  Q
    |||||||||||||||||| ||| |||| ||||||||||| ||||||||    
T  31109597 gacacggacactgacacgccgacaccgttaataatttgagaaaatcaa 31109550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 269
Target Start/End: Original strand, 11093598 - 11093656
Alignment:
Q  211 cggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaat 269  Q
    |||| ||| |||| |||||| |||||| ||||||||||| ||| |||||||||||||||    
T  11093598 cggacatcagacatgacacgaacactggcacgtcgatacagctgataatttgaaaaaat 11093656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 288
Target Start/End: Complemental strand, 18170575 - 18170497
Alignment:
Q  211 cggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaatta 288  Q
    |||||| ||| ||||||||||||||||||||| ||| ||   ||| ||||||||||||| | |||||| ||||||||||    
T  18170575 cggataccggtcacgacacggacactgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaatta 18170497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 288
Target Start/End: Complemental strand, 18634143 - 18634065
Alignment:
Q  211 cggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaatta 288  Q
    |||||| ||| ||||||||||||||||||||| ||| ||   ||| ||||||||||||| | |||||| ||||||||||    
T  18634143 cggataccggtcacgacacggacactgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaatta 18634065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 296
Target Start/End: Complemental strand, 20679468 - 20679402
Alignment:
Q  231 gacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||||| ||||| ||| |||||||||||| ||||||| ||| || | ||||||||||||||||    
T  20679468 gacactgacatgtcgacacccctaataatttgagaaaatcacatagttcagtgtaattataagtgtc 20679402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 333 - 367
Target Start/End: Complemental strand, 34127204 - 34127170
Alignment:
Q  333 acacctaatccaaagagtgtccgtgcttcatagct 367  Q
    ||||||||||||| |||||||||||||||||||||    
T  34127204 acacctaatccaaggagtgtccgtgcttcatagct 34127170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 285
Target Start/End: Original strand, 28745470 - 28745539
Alignment:
Q  217 tcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaa 285  Q
    |||||||||||||||| | ||| || |||| || ||||||||||||||||| ||| |||||| |||||||    
T  28745470 tcggacacgacacggataatgatacatcgacactgctaataatttgaaaaattcacataattcaatgtaa 28745539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 365
Target Start/End: Complemental strand, 29510282 - 29510233
Alignment:
Q  316 gtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    |||||||||||||  | ||||||||||| | |||||||||||||||||||    
T  29510282 gtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 29510233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 29776013 - 29776062
Alignment:
Q  222 cacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    ||||||||||||| ||||| ||||| || ||||||||||||| |||||||    
T  29776013 cacgacacggacattgacaagtcgacactgctaataatttgagaaaatca 29776062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 926874 - 926822
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatc 270  Q
    ||||||||||||||||||||||||| | | ||  |||||||||||| ||||||    
T  926874 cggacacgacacggacactgacacgccaacactcctaataatttgagaaaatc 926822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 365
Target Start/End: Original strand, 11944739 - 11944795
Alignment:
Q  309 acgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    ||||||||| ||||||||||| | || |||||||| | |||||| ||||||||||||    
T  11944739 acgacatgtatccgacaccgagacacgcctaatccgatgagtgttcgtgcttcatag 11944795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 365
Target Start/End: Original strand, 13397622 - 13397670
Alignment:
Q  317 tgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    ||||||||||||| | || |||||| ||| |||||||||||||||||||    
T  13397622 tgtccgacaccgagacacgcctaattcaaggagtgtccgtgcttcatag 13397670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 306
Target Start/End: Original strand, 25566847 - 25566903
Alignment:
Q  251 gctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    ||||||||||||||||||||| |||||| | |||||||| ||||||| || ||||||    
T  25566847 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 25566903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 286
Target Start/End: Original strand, 29519181 - 29519237
Alignment:
Q  231 gacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaat 286  Q
    |||||||||||||| | |||| ||||||||| ||||||||| |||||| ||||||||    
T  29519181 gacactgacacgtcaacaccgataataattttaaaaaatcatataattcaatgtaat 29519237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 296
Target Start/End: Complemental strand, 31236644 - 31236584
Alignment:
Q  237 gacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||| ||| || ||||||||||||| ||||||| |||||| |||||||||||| |||||    
T  31236644 gacacgccgacactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtc 31236584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 4e-23; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 219 - 305
Target Start/End: Complemental strand, 20539759 - 20539672
Alignment:
Q  219 ggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtg 305  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||| |||||||| ||||||| || |||||    
T  20539759 ggacacgacacggacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcgtg 20539672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 365
Target Start/End: Original strand, 37558957 - 37559096
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgtccga 323  Q
    |||||||||||||||||| ||| || |||||||||||| |||||||| |||||| |||||||||| ||||||| || ||  | |   |||| ||||||||    
T  37558957 gacacggacactgacacgccgacacagctaataatttgtaaaaatcacataattcaatgtaattacaagtgtcggtgtc--ggacttgacacgtgtccga 37559054  T
Q  324 caccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    |||||  | || | |||||| | |||||||||||||||||||    
T  37559055 caccggtacacgcttaatccgaggagtgtccgtgcttcatag 37559096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 365
Target Start/End: Complemental strand, 18841099 - 18840953
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatg 316  Q
    ||||||||||| |||||||||||||  || ||  |||||||||||||||||| | |||||| | |||||||| ||||||| || ||    | ||||||      
T  18841099 cggacacgacatggacactgacacgctgacacaactaataatttgaaaaaattacataattaagtgtaattacaagtgtcggtgtc--agacacgacaca 18841002  T
Q  317 tgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    ||||||||||||  | ||||||||||| | |||||||||||||||||||    
T  18841001 tgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 18840953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 223 - 365
Target Start/End: Original strand, 15972851 - 15972992
Alignment:
Q  223 acgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgtcc 321  Q
    |||||||||||||||||||| ||| ||   ||||||||||||||||| | | |||| | |||||||| ||||||| || |||   | |||||| ||||||    
T  15972851 acgacacggacactgacacgccgacacaattaataatttgaaaaaattacacaattcagtgtaattacaagtgtcggtgtcgg--acacgacacgtgtcc 15972948  T
Q  322 gacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    ||| |||  | ||||||||||| |||| ||||||||||||||||    
T  15972949 gacgccgggacacacctaatccgaagaatgtccgtgcttcatag 15972992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 220 - 295
Target Start/End: Original strand, 21616737 - 21616813
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgt 295  Q
    |||||||||||||||| |||||| ||| |||||||||||||||| ||||||| |||||| | |||||||||| ||||    
T  21616737 gacacgacacggacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 30404936 - 30404857
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||| |||||||||||||||||| ||| || | ||||||||||||||||||| |||||| | |||||||| |||||||    
T  30404936 cggacatgacacggacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaattacaagtgtc 30404857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 306
Target Start/End: Complemental strand, 36756432 - 36756341
Alignment:
Q  216 atcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    |||||| ||||||| |||||||||||||||| ||  ||||||||||||| |||| | |||||| | |||||||||||||||| || ||||||    
T  36756432 atcggatacgacacagacactgacacgtcgacacaactaataatttgaagaaataacataattcagtgtaattataagtgtcggtgtcgtgt 36756341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 4882784 - 4882703
Alignment:
Q  216 atcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||| ||| |||| || ||||||||||||||||||||||| |||||||||||| | |||||| | |||||||| |||||||    
T  4882784 atcgggcacaacacagatactgacacgtcgataccgctaattatttgaaaaaatgatataattcagtgtaattacaagtgtc 4882703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 12941019 - 12940950
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaatta 288  Q
    |||||||||||||||||||||||| || ||  |||||||||||||||||||| |||||| | ||||||||    
T  12941019 gacacgacacggacactgacacgttgacacaactaataatttgaaaaaatcatataattcagtgtaatta 12940950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 223 - 361
Target Start/End: Original strand, 6940233 - 6940370
Alignment:
Q  223 acgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgtcc 321  Q
    |||||||||||||||||||| ||| || ||||||||||| ||||| | | |||||| | |||||||| ||||||| |||||    | |||||| ||||||    
T  6940233 acgacacggacactgacacgccgacacagctaataattttaaaaagttacataattaagtgtaattacaagtgtcggtatc--cgacacgacacgtgtcc 6940330  T
Q  322 gacaccgaaatacacctaatccaaagagtgtccgtgcttc 361  Q
     ||||| | | |||||||||| || || ||||||||||||    
T  6940331 aacaccaagacacacctaatcaaatgattgtccgtgcttc 6940370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 225 - 296
Target Start/End: Original strand, 39323244 - 39323316
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||||||||| ||||||| |||||||||||||||| ||||| | |||||| | |||||||| |||||||    
T  39323244 gacacggacactgaaacgtcgacaccgctaataatttgacaaaattacataattcagtgtaattacaagtgtc 39323316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 4763447 - 4763490
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaa 268  Q
    ||||||||||||||||||||| || |||||||||||||||||||    
T  4763447 gacacggacactgacacgtcgttatcgctaataatttgaaaaaa 4763490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 221 - 291
Target Start/End: Original strand, 15349816 - 15349887
Alignment:
Q  221 acacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataa 291  Q
    ||||||||| |||| |||||||||||||| | || |||||| ||||||||| |||||||||| |||||||||    
T  15349816 acacgacacagacaatgacacgtcgatactgttagtaatttaaaaaaatcacataatttaatataattataa 15349887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 23717999 - 23718078
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||| |||||||||||||||||  ||| |||||||||||||||| ||| ||| |||||| | |||||||||| |||||    
T  23717999 cggacatgacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtc 23718078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 24105671 - 24105750
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||| |||||||||||||||||  ||| |||||||||||||||| ||| ||| |||||| | |||||||||| |||||    
T  24105671 cggacatgacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtc 24105750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 14996308 - 14996230
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaa-aaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||| |||||||||||||||| | ||| || |||||||||||||| ||||||| |||||||| |||||||| |||||||    
T  14996308 gacatgacacggacactgacaagccgacacagctaataatttgaaaaaaatcatataatttagtgtaattacaagtgtc 14996230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 28412325 - 28412395
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattat 289  Q
    ||||||||||||||||| ||||||| | |||| ||||||||||| ||||||| |||||| | |||||||||    
T  28412325 gacacgacacggacactaacacgtcaacaccgttaataatttgataaaatcacataattcagtgtaattat 28412395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 36409711 - 36409641
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattat 289  Q
    ||||||||||||| ||| ||| | ||| |||||| ||||||||||||||||| |||||||| |||||||||    
T  36409711 gacacgacacggatactcacatgccgacaccgctgataatttgaaaaaatcacataatttagtgtaattat 36409641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 16069333 - 16069268
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattat 289  Q
    |||||||||||||||||| ||| |||| ||||||||| ||||||||| |||||| | |||||||||    
T  16069333 gacacggacactgacacgccgacaccgttaataatttaaaaaaatcatataattcagtgtaattat 16069268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 224 - 367
Target Start/End: Complemental strand, 30717610 - 30717457
Alignment:
Q  224 cgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt---------atacgac 313  Q
    |||||||||||||||||   ||| |  ||||||||||||||||||||| |||||| | |||||||| |||||||  | ||||||         | |||||    
T  30717610 cgacacggacactgacaaaccgacaaagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgac 30717511  T
Q  314 atgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatagct 367  Q
    | |||| |||||| |  |||| |||||||||| |||||||||||||||||||||    
T  30717510 acgtgttcgacactgggatacgcctaatccaaggagtgtccgtgcttcatagct 30717457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 296
Target Start/End: Complemental strand, 19536508 - 19536404
Alignment:
Q  194 tctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttg-aaaaaatca-ataatttaatgtaattataa 291  Q
    |||||||||||  ||  |||| | ||||||||||||||||| ||||||| ||| ||  ||||||||||| ||||||||| |||||| | |||||||| ||    
T  19536508 tctatgaagcacagatacggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaaatcacataattcagtgtaattacaa 19536409  T
Q  292 gtgtc 296  Q
    |||||    
T  19536408 gtgtc 19536404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 296
Target Start/End: Complemental strand, 21374778 - 21374706
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||||||| ||||| ||| || ||||||||||||||||||| | |||||| | |||||||| |||||||    
T  21374778 gacacggacactaacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtc 21374706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 289
Target Start/End: Complemental strand, 21782903 - 21782832
Alignment:
Q  219 ggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattat 289  Q
    |||||||||||  ||||||||||| ||| || ||||||||||||| ||||||| |||||| | |||||||||    
T  21782903 ggacacgacacaaacactgacacgccgacactgctaataatttgagaaaatcacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 288
Target Start/End: Original strand, 30335378 - 30335461
Alignment:
Q  206 ggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaatta 288  Q
    |||| ||||| || |||||||||||||||||  |||| ||| ||  |||||||||||||||||| | |||||||| ||||||||    
T  30335378 ggacacggatctcagacacgacacggacactagcacgccgacacaactaataatttgaaaaaatgacataatttagtgtaatta 30335461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 31018563 - 31018642
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||| |||||| ||||||||||||| | | |||||||||||||| | ||||||| || ||||| |||||||||| |||||    
T  31018563 cggatacgacatggacactgacacgccaacaccgctaataatttcagaaaatcacatgatttagtgtaattataggtgtc 31018642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 363
Target Start/End: Complemental strand, 2438772 - 2438661
Alignment:
Q  251 gctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgtccgacaccgaaatacacctaatccaaagag 349  Q
    ||||||||||| ||||||||| |||||| | |||||||| ||||||| || |||   | ||||||  ||||||||||||  | || |||||||| | |||    
T  2438772 gctaataatttcaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgg--acacgacacatgtccgacaccgggacacgcctaatccgaggag 2438675  T
Q  350 tgtccgtgcttcat 363  Q
    ||||||||||||||    
T  2438674 tgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 357
Target Start/End: Original strand, 5040731 - 5040845
Alignment:
Q  244 cgataccgctaataatttg--aaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgtccgacaccgaaatacacctaa 340  Q
    |||||| ||||||||||||  ||||||||| |||||| |||||||||| ||||||| || ||  | | |||||||||||||||| |||  | || ||||     
T  5040731 cgatacagctaataatttgaaaaaaaatcacataattcaatgtaattacaagtgtcggtgtc--ggacacgacatgtgtccgacgccgggacacgcctag 5040828  T
Q  341 tccaaagagtgtccgtg 357  Q
    ||||| |||||||||||    
T  5040829 tccaaggagtgtccgtg 5040845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 261
Target Start/End: Complemental strand, 10548011 - 10547973
Alignment:
Q  223 acgacacggacactgacacgtcgataccgctaataattt 261  Q
    |||||||||||||||||||||||| |||| |||||||||    
T  10548011 acgacacggacactgacacgtcgacaccgttaataattt 10547973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 295
Target Start/End: Original strand, 24894370 - 24894440
Alignment:
Q  226 acacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgt 295  Q
    ||||||||||||||||| ||| || ||||||||||| ||||||||| |||||| | || ||||| ||||||    
T  24894370 acacggacactgacacgccgacacagctaataatttaaaaaaatcacataattcagtgcaattaaaagtgt 24894440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 28677889 - 28677955
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattata 290  Q
    ||||| |||||||  ||| ||| |||||||||||||||||||||||| |||||| | ||||||||||    
T  28677889 gacactgacactggaacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattata 28677955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 29663983 - 29664033
Alignment:
Q  219 ggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaat 269  Q
    ||||||||||| |||||||||| ||||| |  |||||||||||||||||||    
T  29663983 ggacacgacacagacactgacatgtcgacagtgctaataatttgaaaaaat 29664033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 367
Target Start/End: Original strand, 35056942 - 35057000
Alignment:
Q  309 acgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatagct 367  Q
    |||||| ||||||||||| |||| || |||||||  | |||||||||||||||||||||    
T  35056942 acgacacgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgcttcatagct 35057000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 6290132 - 6290181
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaaaaaat 269  Q
    ||||||||||| |||||| |||||||  |||||||||||||| |||||||    
T  6290132 gacacgacacgaacactggcacgtcggcaccgctaataatttaaaaaaat 6290181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 15657837 - 15657926
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    ||||||||||||||||||| ||||| |||  |  ||||||||||| |||||||| |||||| | |||||||| || |||| || ||||||    
T  15657837 cggacacgacacggacactaacacgccgactcaactaataatttgtaaaaatcacataattcagtgtaattacaaatgtcggtgtcgtgt 15657926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 18421934 - 18422015
Alignment:
Q  216 atcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||| |||||||||||||||||||| ||| ||   ||||||||| |||| |||| |||||| | |||||||| |||||||    
T  18421934 atcggatacgacacggacactgacacgccgacacaattaataatttaaaaatatcacataattcagtgtaattacaagtgtc 18422015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 27286376 - 27286299
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||||| ||||||||||| ||| ||| | |||||||||||||| || |||| |||||| | |||||||||| |||||    
T  27286376 gacacgatacggacactgatacgccgacaacgctaataatttgataagatcacataattaagtgtaattataggtgtc 27286299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 365
Target Start/End: Complemental strand, 34006979 - 34006930
Alignment:
Q  316 gtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    ||||| ||||||| || ||||||||| ||| |||||||||||||||||||    
T  34006979 gtgtctgacaccggaacacacctaattcaaggagtgtccgtgcttcatag 34006930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 11670741 - 11670781
Alignment:
Q  231 gacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    ||||||||||||||||  || ||||||||||||||||||||    
T  11670741 gacactgacacgtcgacgccactaataatttgaaaaaatca 11670781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 367
Target Start/End: Complemental strand, 18054774 - 18054714
Alignment:
Q  307 atacgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatagct 367  Q
    |||||||| ||||| ||||| |||| || ||| |||||| || ||||||||||||||||||    
T  18054774 atacgacacgtgtctgacacggaaacacgccttatccaaggaatgtccgtgcttcatagct 18054714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 18256031 - 18255987
Alignment:
Q  253 taataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||||||| ||||||||| ||||||||||||||||| |||||||    
T  18256031 taataatttaaaaaaatcacataatttaatgtaattagaagtgtc 18255987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 19580274 - 19580222
Alignment:
Q  316 gtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatagcta 368  Q
    |||||| ||||| ||| ||| ||||||| ||||||||| ||||||||||||||    
T  19580274 gtgtccaacaccaaaacacatctaatccgaagagtgtctgtgcttcatagcta 19580222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 291
Target Start/End: Original strand, 23921228 - 23921300
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataa 291  Q
    ||||||| || |||| ||||| |||||||||| ||||||||||| ||||| | |||||| | |||||||||||    
T  23921228 gacacgatacagacattgacaggtcgataccgttaataatttgagaaaattacataattcagtgtaattataa 23921300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 281
Target Start/End: Complemental strand, 34337274 - 34337198
Alignment:
Q  206 ggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaat 281  Q
    |||| |||||| || | |||||||||||| ||||||| ||| || | | ||||||||||||||||| ||||||||||    
T  34337274 ggacacggataccgtatacgacacggacattgacacgccgacacagttgataatttgaaaaaatcacataatttaat 34337198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 38117232 - 38117192
Alignment:
Q  231 gacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    |||||||||||| ||| || |||||||||||||||||||||    
T  38117232 gacactgacacgccgacacagctaataatttgaaaaaatca 38117192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 204 - 360
Target Start/End: Original strand, 13770650 - 13770810
Alignment:
Q  204 atggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatc 302  Q
    |||||| |||| ||||||||||||||||||||||| ||| ||| || ||||||||||| ||||||| | |||||| | |||||||| |||||||  | ||    
T  13770650 atggactcggacatcggacacgacacggacactgatacgccgacacagctaataatttaaaaaaattacataattcagtgtaattacaagtgtcgttgtc 13770749  T
Q  303 gtgt---atacgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgctt 360  Q
    ||||   | || ||| ||||||||||||| || || |||||||| ||||||||||||||||    
T  13770750 gtgtcggacacaacacgtgtccgacaccggaacacgcctaatccgaagagtgtccgtgctt 13770810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 218 - 365
Target Start/End: Complemental strand, 5409922 - 5409771
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt---atacgac 313  Q
    |||| |||||| |||||||||||||  ||||| ||||||||||||||||||||| |||||| | || ||||| ||||||| || ||||||   | |||||    
T  5409922 cggatacgacatggacactgacacgctgatacagctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcgtgtcggacacgac 5409823  T
Q  314 atgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    | |||||||||||||  | || |||||||| | |||||||||||||||||||    
T  5409822 acgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 5409771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 219 - 366
Target Start/End: Complemental strand, 43027554 - 43027403
Alignment:
Q  219 ggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt---atacgaca 314  Q
    |||||||||||||||||||||||| |||  | ||||||||||||||||||||| |||||  | ||||| || ||||||| || ||||||   | ||||||    
T  43027554 ggacacgacacggacactgacacggcgacccagctaataatttgaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcgtgtcagacacgaca 43027455  T
Q  315 tgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatagc 366  Q
     |||||||||||||  | || |||||||| | ||||||||||||||||||||    
T  43027454 cgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgcttcatagc 43027403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 221 - 296
Target Start/End: Complemental strand, 14077517 - 14077441
Alignment:
Q  221 acacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||||||||||| ||||||||||||| ||||| |||||||||||| | |||||||||| ||||||||||||||    
T  14077517 acacgacacggacacttacacgtcgatacccctaattatttgaaaaaataacataatttaatataattataagtgtc 14077441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 221 - 296
Target Start/End: Complemental strand, 14387545 - 14387469
Alignment:
Q  221 acacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||||||||||| ||||||||||||| ||||| |||||||||||| | |||||||||| ||||||||||||||    
T  14387545 acacgacacggacacttacacgtcgatacccctaattatttgaaaaaataacataatttaatataattataagtgtc 14387469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 192 - 269
Target Start/End: Original strand, 24105626 - 24105702
Alignment:
Q  192 attctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaat 269  Q
    ||||||||||||| |||  |||||| ||||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  24105626 attctatgaagcacggatacggata-cggacacgacacggacactgacacgccgacacagctaataatttgaaaaaat 24105702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 220 - 366
Target Start/End: Original strand, 598183 - 598328
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtg 318  Q
    |||| ||||||||||||||||| |||| |||||||||||||| | |||||||  ||||| ||||||||| |||||||| || ||    | |||||| |||    
T  598183 gacatgacacggacactgacacatcgacaccgctaataatttaagaaaatcacgtaattaaatgtaattgtaagtgtcggtgtc--agacacgacacgtg 598280  T
Q  319 tccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatagc 366  Q
    ||||||||||  | || |||||||| |  |||||||||||||||||||    
T  598281 tccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatagc 598328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 211 - 365
Target Start/End: Original strand, 25481868 - 25482021
Alignment:
Q  211 cggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtata 309  Q
    |||| ||||||||| ||| ||||| ||||||| ||| || ||||||||||||||||||||| |||||| | |||||||| ||||||  || ||  | | |    
T  25481868 cggacatcggacacaacatggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgtc--ggaca 25481965  T
Q  310 cgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    ||| ||||||||||||  |||| || | |||| |||||||| ||||||||||||||    
T  25481966 cgatatgtgtccgacattgaaacacgcttaattcaaagagtatccgtgcttcatag 25482021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 306
Target Start/End: Original strand, 27944991 - 27945103
Alignment:
Q  195 ctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagt 293  Q
    |||||||||| |||  |||| | ||||||||||||||||||||||||| ||| ||| |||||||||||| ||||| | |||||| | |||||||| ||||    
T  27944991 ctatgaagcacggatacggacaccggacacgacacggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaattacaagt 27945090  T
Q  294 gtctgtatcgtgt 306  Q
    ||| || ||||||    
T  27945091 gtcggtgtcgtgt 27945103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 221 - 366
Target Start/End: Original strand, 1433430 - 1433579
Alignment:
Q  221 acacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt---atacgacatg 316  Q
    |||||||||||||| ||||||| ||| |||| ||||||||||| ||||||| || ||||  |||||||||| ||||| || ||||||   | | ||||||    
T  1433430 acacgacacggacattgacacgccgacaccgttaataatttgagaaaatcacatcatttggtgtaattatatgtgtcggtgtcgtgtcggacaagacatg 1433529  T
Q  317 tgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatagc 366  Q
    |||||||||||   | ||  ||||||| | ||||||||||||||||||||    
T  1433530 tgtccgacaccaggacacgtctaatccgaggagtgtccgtgcttcatagc 1433579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 206 - 296
Target Start/End: Complemental strand, 11061174 - 11061083
Alignment:
Q  206 ggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||| |||| |||||| |||||||||||||||||||  ||| || ||||||||||||||||||||| |||||||| | |||||| |||||||    
T  11061174 ggacacggacatcggatacgacacggacactgacacaccgacacagctaataatttgaaaaaatcacataatttagtataattacaagtgtc 11061083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 26733279 - 26733330
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  26733279 gacacgacacggacactgacacgtcgacaccgctaataatttgacaaaatca 26733330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 365
Target Start/End: Original strand, 15680789 - 15680928
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgtccga 323  Q
    |||| ||||||||||||| ||| |  ||||||||||  ||||||||| |||||||| |||||||||||||||| || |||   | |||||| ||||||||    
T  15680789 gacatggacactgacacgccgacatagctaataattaaaaaaaatcacataatttagtgtaattataagtgtcggtgtcgg--acacgacacgtgtccga 15680886  T
Q  324 caccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    |||||| | ||  ||||| | | |||||||||||||||||||    
T  15680887 caccgagacacgtctaattcgaggagtgtccgtgcttcatag 15680928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 296
Target Start/End: Complemental strand, 42720963 - 42720897
Alignment:
Q  231 gacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||||||||||| || |||||||||||||||||||||||| |||||| |||||||||||| |||||    
T  42720963 gacactgacacgttgacaccgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtc 42720897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 24339615 - 24339704
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    ||||||||||| ||||| ||||||| ||| || ||||||||||||||||||||| |||||| | |||||||| ||||||| || ||||||    
T  24339615 cggacacgacatggacattgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 24339704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 4793835 - 4793887
Alignment:
Q  217 tcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaat 269  Q
    ||||||||||||| ||||||||||||||||||| |||||||| ||||||||||    
T  4793835 tcggacacgacacagacactgacacgtcgatacagctaataacttgaaaaaat 4793887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 219 - 290
Target Start/End: Original strand, 5235960 - 5236032
Alignment:
Q  219 ggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattata 290  Q
    ||||||||||| |||||||||||||||| |||||||||||||| | ||||| | |||||||| ||||||||||    
T  5235960 ggacacgacacagacactgacacgtcgacaccgctaataatttaagaaaattatataatttagtgtaattata 5236032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 220 - 295
Target Start/End: Original strand, 5956248 - 5956324
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatcaa-taatttaatgtaattataagtgt 295  Q
    ||||||||| ||| ||||||||| ||||||  |||||||||| |||||||||| |||||||||||||||||| ||||    
T  5956248 gacacgacatggatactgacacgccgatactcctaataatttaaaaaaatcaaataatttaatgtaattatatgtgt 5956324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 195 - 306
Target Start/End: Complemental strand, 7328800 - 7328688
Alignment:
Q  195 ctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagt 293  Q
    |||||||||| |||  |||| | || ||||||||| |||| | |||||||||||| ||||||||||||| ||||| | |||||||| |||||||||| ||    
T  7328800 ctatgaagcacggatacggacaccgaacacgacacagacattaacacgtcgatactgctaataatttgagaaaataacataatttagtgtaattatatgt 7328701  T
Q  294 gtctgtatcgtgt 306  Q
    ||| || ||||||    
T  7328700 gtcggtgtcgtgt 7328688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 11722191 - 11722131
Alignment:
Q  211 cggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    |||||| ||||||||||||||||||||||||| ||| |||||||| ||||||| |||||||    
T  11722191 cggataccggacacgacacggacactgacacgccgacaccgctaacaatttgagaaaatca 11722131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 17851404 - 17851486
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgt 299  Q
    ||||||||||| ||| || ||||| ||||||||||||||||||| | ||||||| |||||| | |||||||||| ||||||||    
T  17851404 cggacacgacatggataccgacacatcgataccgctaataattttagaaaatcacataattcagtgtaattatatgtgtctgt 17851486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 6028586 - 6028687
Alignment:
Q  206 ggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgt 304  Q
    |||| |||| ||| |||||||||| ||||||||||| ||||||  | |||||||||||||| || | ||||||||||||||||| || |||| || ||||    
T  6028586 ggacacggacatcagacacgacacagacactgacacatcgatatggttaataatttgaaaatataacataatttaatgtaattacaaatgtcggtgtcgt 6028685  T
Q  305 gt 306  Q
    ||    
T  6028686 gt 6028687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 307
Target Start/End: Original strand, 10042915 - 10043000
Alignment:
Q  223 acgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgta 307  Q
    |||||||||||||| ||||| ||| ||| |||||||||||| ||| ||| ||||||||  ||||||||||||||| || |||||||    
T  10042915 acgacacggacacttacacgccgacaccactaataatttgataaattcacataatttagcgtaattataagtgtcagtgtcgtgta 10043000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 255 - 365
Target Start/End: Original strand, 9778510 - 9778624
Alignment:
Q  255 ataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt---atacgacatgtgtccgacaccgaaatacacctaatccaaagagt 350  Q
    ||||||||||||||||| |||||| | | |||||| ||||||| || ||||||   | || ||| |||||||||||||  | || |||||||||| ||||    
T  9778510 ataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcgtgtcggacacaacacgtgtccgacaccgggacacgcctaatccaaggagt 9778609  T
Q  351 gtccgtgcttcatag 365  Q
    |||||||||||||||    
T  9778610 gtccgtgcttcatag 9778624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 15902795 - 15902874
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||||||| |||||||||| | ||| |||  ||||||||||| ||||||| |||||||| |||||||||| |||||    
T  15902795 cggacacgacacagacactgacatgccgacaccaataataatttgataaaatcacataatttagtgtaattatatgtgtc 15902874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 296
Target Start/End: Original strand, 19206016 - 19206102
Alignment:
Q  211 cggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||| | ||||||||||||||||  ||||| ||| |||||||||||||||| ||||||| |||||| | | |||||||| |||||    
T  19206016 cggataccagacacgacacggacaccaacacgccgacaccgctaataatttgagaaaatcacataattcattataattatatgtgtc 19206102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 302
Target Start/End: Original strand, 22868015 - 22868100
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatc 302  Q
    ||||||| |||| |||||||||||| ||| ||| |||||||| ||| ||||||| |||||| | |||||||||| ||||| |||||    
T  22868015 cggacacaacaccgacactgacacgccgacaccactaataatatgagaaaatcacataattcagtgtaattatatgtgtcagtatc 22868100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 230 - 306
Target Start/End: Original strand, 32308105 - 32308182
Alignment:
Q  230 ggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    ||||||||||||| ||| |||||||||||||||| ||||||| |||||| | ||||||| || ||||| || ||||||    
T  32308105 ggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgt 32308182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 304
Target Start/End: Original strand, 35861971 - 35862024
Alignment:
Q  252 ctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgt 304  Q
    |||||||||||||||||||| |||||| ||||||||| ||||||||||| ||||    
T  35861971 ctaataatttgaaaaaatcacataattcaatgtaattgtaagtgtctgtgtcgt 35862024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 21864777 - 21864860
Alignment:
Q  216 atcggacacgacacggacactgacacgtcgataccgctaataatttg--aaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||||||||||||||| |||||   || || ||||||||||||  ||||||||| |||||||| |||||||| |||||||    
T  21864777 atcggacacgacacggacacggacacacggacacagctaataatttgaaaaaaaatcatataatttagtgtaattacaagtgtc 21864860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 1401007 - 1401074
Alignment:
Q  227 cacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagt 293  Q
    ||||||||||||||||  |||| |||||||||||||| ||| ||| |||||| | |||||||||||||    
T  1401007 cacggacactgacacgctgatatcgctaataatttgagaaactcacataattcagtgtaattataagt 1401074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 253 - 295
Target Start/End: Original strand, 38143231 - 38143274
Alignment:
Q  253 taataatttgaaaaaatca-ataatttaatgtaattataagtgt 295  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||    
T  38143231 taataatttgaaaaaatcacataatttaatgtaattatatgtgt 38143274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 43249966 - 43250045
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||| |||||||||||||||||| ||| || | ||||||||||| ||||| | |||||  | ||||||||||||||||    
T  43249966 cggacaagacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtc 43250045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 306
Target Start/End: Original strand, 49107795 - 49107882
Alignment:
Q  219 ggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatcaataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    ||||||||||||||| |||||||  ||| |||||||||||||||| ||||   |||||| | ||| |||||| ||||| || ||||||    
T  49107795 ggacacgacacggactctgacacaccgacaccgctaataatttgagaaaacacataattgagtgtgattatatgtgtcggtgtcgtgt 49107882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 284
Target Start/End: Original strand, 2034392 - 2034481
Alignment:
Q  195 ctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgta 284  Q
    |||||||||| |||  |||||| | ||||||||||||| ||| ||||||||| ||| |||||||||||| || |||| |||||||| ||||    
T  2034392 ctatgaagcacggatacggata-ctgacacgacacggatacttacacgtcgacaccactaataatttgagaatatcatataatttagtgta 2034481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 4017879 - 4017801
Alignment:
Q  219 ggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||||||||||||||| |||||| ||| || | ||||||||||| ||||  | |||||||| |||||| |||||||||    
T  4017879 ggacacgacacggacaccgacacgccgacacggataataatttgagaaaacgatataatttagtgtaatcataagtgtc 4017801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 296
Target Start/End: Original strand, 7438672 - 7438758
Alignment:
Q  211 cggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||| |||||| ||||||   ||||||||| | ||| || | ||||||||||||||||||| |||||| |||||||||| |||||||    
T  7438672 cggacatcggatacgacataaacactgacatgccgacacagttaataatttgaaaaaatcacataattcaatgtaattacaagtgtc 7438758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 365
Target Start/End: Original strand, 17852065 - 17852119
Alignment:
Q  311 gacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    |||| |||||||||||||| | ||||||||| | | |||||||||||||||||||    
T  17852065 gacacgtgtccgacaccgagacacacctaattcgaggagtgtccgtgcttcatag 17852119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 241
Target Start/End: Original strand, 1656643 - 1656680
Alignment:
Q  204 atggacccggatatcggacacgacacggacactgacac 241  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  1656643 atggacacggatatcggacacgacacggacaccgacac 1656680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 32287457 - 32287404
Alignment:
Q  311 gacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcata 364  Q
    |||| |||||||||||||  | ||||||||||| | ||||||||||||||||||    
T  32287457 gacaagtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 333 - 365
Target Start/End: Complemental strand, 1042408 - 1042376
Alignment:
Q  333 acacctaatccaaagagtgtccgtgcttcatag 365  Q
    ||||||||||||||||||||||||| |||||||    
T  1042408 acacctaatccaaagagtgtccgtgtttcatag 1042376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 296
Target Start/End: Original strand, 3721070 - 3721145
Alignment:
Q  221 acacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||||||||||||||||||  |||| |  ||||||||||||| ||||||| |||||||| | |||||||| |||||    
T  3721070 acacgacacggacactgacatttcgaca-tgctaataatttgagaaaatcacataatttagtataattatatgtgtc 3721145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 9408385 - 9408341
Alignment:
Q  253 taataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||||||||||||||||| |||||||| |||||||| |||||||    
T  9408385 taataatttgaaaaaatcacataatttagtgtaattacaagtgtc 9408341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 296
Target Start/End: Complemental strand, 21141065 - 21140989
Alignment:
Q  221 acacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||||||||||| | |||||||||| ||| |||||||||| | ||||||| |||||| | ||| |||||| |||||    
T  21141065 acacgacacggacgccgacacgtcgacaccactaataatttaagaaaatcatataattcagtgtgattataggtgtc 21140989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 26033514 - 26033458
Alignment:
Q  251 gctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    ||||||||||||||||||||| |||||| | |||||||| ||||||| || ||||||    
T  26033514 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtctcgtgt 26033458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 289
Target Start/End: Complemental strand, 29787447 - 29787383
Alignment:
Q  226 acacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattat 289  Q
    ||||||||| | ||||| ||| |||||||||||||||| ||||||| |||||| | |||||||||    
T  29787447 acacggacattaacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattat 29787383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 7e-22; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 218 - 365
Target Start/End: Complemental strand, 23293072 - 23292926
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatg 316  Q
    ||||||||||||||||| ||||||| ||| || ||||||||||||||||||||| |||||| | | |||||| ||||||| || ||  | | |||||| |    
T  23293072 cggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtc--ggacacgacacg 23292975  T
Q  317 tgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    ||||||||||||  | || |||||||| | |||||||||||||||||||    
T  23292974 tgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 23292926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 44081665 - 44081584
Alignment:
Q  216 atcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||||||||||| ||||||||||||  ||||| || ||||||||||||||||||| ||||||||||||||||||| |||||    
T  44081665 atcggacacgacaaggacactgacacaccgatatcgttaataatttgaaaaaatcatataatttaatgtaattatatgtgtc 44081584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 362
Target Start/End: Original strand, 28084494 - 28084640
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttg-aaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacat 315  Q
    |||||||||||| ||| |||||||| ||| || ||||| |||||| ||||||||| |||||| |||||||||| |||||||||| ||||||    ||||     
T  28084494 cggacacgacacagacgctgacacgccgacacagctaagaatttgaaaaaaatcacataattcaatgtaattacaagtgtctgtgtcgtgtcggtgacac 28084593  T
Q  316 gtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttca 362  Q
    ||||||||||| |  | || |||||||| | ||||||||||||||||    
T  28084594 gtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 28084640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 220 - 296
Target Start/End: Original strand, 20633460 - 20633534
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatcaataatttaatgtaattataagtgtc 296  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||   |||||| |||||||||| |||||||    
T  20633460 gacacgatacggacactgacacgtcgacaccgctaataatttgaaaaaa--cataattcaatgtaattacaagtgtc 20633534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 218 - 364
Target Start/End: Complemental strand, 3947852 - 3947702
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt---atacgac 313  Q
    ||||||| |||| ||||| |||| | ||| || ||||||||||||||||||||  |||||| | |||||||| ||||||| || ||||||   | |||||    
T  3947852 cggacaccacacagacacggacatgccgacacagctaataatttgaaaaaatcgcataattcagtgtaattacaagtgtcagtgtcgtgtcggacacgac 3947753  T
Q  314 atgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcata 364  Q
    | ||||||||||||   | ||||||||||| | ||||||||||||||||||    
T  3947752 acgtgtccgacaccaggacacacctaatccgaggagtgtccgtgcttcata 3947702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 220 - 306
Target Start/End: Original strand, 30838185 - 30838272
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    |||||| |||||||||||| |||||||||| ||||||||||||| ||||| | |||||||| ||||||||||||| || || ||||||    
T  30838185 gacacggcacggacactgatacgtcgatactgctaataatttgataaaattatataatttagtgtaattataagtatcggtgtcgtgt 30838272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 218 - 365
Target Start/End: Complemental strand, 35158071 - 35157925
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatg 316  Q
    ||||||| ||||||||||||||||| |||  |  ||||||||||| |||||||| |||||||| |||||||||||||||| || || || | ||||||      
T  35158071 cggacacaacacggacactgacacgccgacgcaactaataatttggaaaaatcacataatttagtgtaattataagtgtcggtgtc-tg-acacgacaca 35157974  T
Q  317 tgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    ||||| |||||| || || | |||||| |  ||||||||||||||||||    
T  35157973 tgtccaacaccggaacacgcttaatccgagaagtgtccgtgcttcatag 35157925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 20521933 - 20521882
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    ||||||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  20521933 gacacgacacggacactgacacgccgataccgataataatttgataaaatca 20521882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 221 - 365
Target Start/End: Complemental strand, 2362058 - 2361915
Alignment:
Q  221 acacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgt 319  Q
    ||||||||  |||| ||||||  ||| || ||||||||||||||||||| | |||||||| |||||||| ||||||| || ||  | | |||||  ||||    
T  2362058 acacgacattgacattgacacaccgacacagctaataatttgaaaaaattacataatttagtgtaattaaaagtgtcggtgtc--ggacacgactcgtgt 2361961  T
Q  320 ccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    | |||||||| | ||||||||||  | |||||||||||||||||||    
T  2361960 ctgacaccgagacacacctaatctgacgagtgtccgtgcttcatag 2361915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 225 - 366
Target Start/End: Complemental strand, 12895194 - 12895054
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt---atacgacatgtgtc 320  Q
    ||||||||||| |||||| ||| || ||||||||||||||||||||| |||||| || ||||||| ||||||| || ||||||   | ||||||     |    
T  12895194 gacacggacac-gacacgccgaaacagctaataatttgaaaaaatcacataattcaaagtaattacaagtgtcggtgtcgtgtcggacacgaca----cc 12895100  T
Q  321 cgacaccgaaatacacctaatccaaagagtgtccgtgcttcatagc 366  Q
    ||||||||  |||| |||||| | ||||||||||||||||||||||    
T  12895099 cgacaccgggatacgcctaattcgaagagtgtccgtgcttcatagc 12895054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 218 - 366
Target Start/End: Complemental strand, 12895360 - 12895213
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatg 316  Q
    |||| |||||||| ||| ||||||| ||| ||   ||||||||||||||||||| |||||||  |||||||||||||||| || |||   | ||||||||    
T  12895360 cggatacgacacgaacaatgacacgccgacacaaataataatttgaaaaaatcacataattttgtgtaattataagtgtcggtgtcgg--acacgacatg 12895263  T
Q  317 tgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatagc 366  Q
    | ||||||| ||  | || |||||||| | |||||| |||||||||||||    
T  12895262 tatccgacatcgggacacgcctaatccgaggagtgttcgtgcttcatagc 12895213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 218 - 364
Target Start/End: Complemental strand, 30982961 - 30982808
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt---------a 307  Q
    |||| ||||||||||||| |||||| |   ||||||||| |||||| ||||||| ||| || | |||||||||||||||| || ||||||         |    
T  30982961 cggatacgacacggacacagacacgcc---accgctaatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgtgtcggtgtcaga 30982865  T
Q  308 tacgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcata 364  Q
     |||||| |||||||||||||  | || |||||||||||||||||||||||||||||    
T  30982864 cacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgcttcata 30982808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 220 - 295
Target Start/End: Complemental strand, 27706261 - 27706185
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgt 295  Q
    ||||||||| ||||||||||||||||| ||   ||||||||| ||||||||| |||||||| |||||||| ||||||    
T  27706261 gacacgacagggacactgacacgtcgacacaattaataatttaaaaaaatcacataatttagtgtaattacaagtgt 27706185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 309 - 365
Target Start/End: Original strand, 35161099 - 35161155
Alignment:
Q  309 acgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    |||||| ||||||||||||| || ||||||||||| || ||||||||||||||||||    
T  35161099 acgacacgtgtccgacaccggaacacacctaatccgaaaagtgtccgtgcttcatag 35161155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 847924 - 847975
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaat 269  Q
    |||||||||||| |||||||||||| |||| ||||||||||||||| |||||    
T  847924 cggacacgacacagacactgacacgccgatgccgctaataatttgagaaaat 847975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 11651218 - 11651167
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    ||||||| ||||||||||||||||||| || ||||||||||| |||||||||    
T  11651218 gacacgatacggacactgacacgtcgacacagctaataatttaaaaaaatca 11651167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 31800563 - 31800477
Alignment:
Q  219 ggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatcaa-taatttaatgtaattataagtgtctgtatcgt 304  Q
    ||||| |||||| |||| |||||  ||| || ||||||||||| ||||||| || |||||||||||||||| ||||||| |||||||    
T  31800563 ggacatgacacgaacaccgacacaccgacacagctaataattttaaaaaattaaataatttaatgtaattacaagtgtcggtatcgt 31800477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 295
Target Start/End: Original strand, 36635297 - 36635375
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgt 295  Q
    |||||||||| |||||||||||||| | | ||| |||||||||||| ||||||| |||||| | |||||||||| ||||    
T  36635297 cggacacgactcggacactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaattatatgtgt 36635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 295
Target Start/End: Original strand, 40481610 - 40481687
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgt 295  Q
    |||||||||||| |||||||||||| ||||||  ||||||||||| |||||||| |||||| | |||||||| ||||||    
T  40481610 cggacacgacactgacactgacacgccgatacaactaataatttg-aaaaatcacataattcagtgtaattacaagtgt 40481687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 306
Target Start/End: Complemental strand, 16303351 - 16303263
Alignment:
Q  219 ggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    |||||||| ||||||||||||||| ||| |  | ||||| ||||||||||| | |||||||| |||||||| ||||||| || ||||||    
T  16303351 ggacacgatacggacactgacacgccgacaaagataatattttgaaaaaatgatataatttagtgtaattacaagtgtcggtgtcgtgt 16303263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 35723470 - 35723391
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaat-ca-ataatttaatgtaattataagtgtc 296  Q
    ||||||||||| | ||||||||||| ||| |||||||||||||||| ||||| || |||||| |||||||||||| |||||    
T  35723470 cggacacgacatg-acactgacacgccgacaccgctaataatttgagaaaatacacataattcaatgtaattatatgtgtc 35723391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 49430998 - 49431078
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttg-aaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||||| |||||| ||||||| ||| || |||||||||||| ||||||||| |||||| | |||||||| |||||||    
T  49430998 cggacacgactcggacagtgacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtc 49431078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 267
Target Start/End: Original strand, 4383351 - 4383390
Alignment:
Q  228 acggacactgacacgtcgataccgctaataatttgaaaaa 267  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  4383351 acggacactgacacgtcgatacaactaataatttgaaaaa 4383390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 5096170 - 5096131
Alignment:
Q  230 ggacactgacacgtcgataccgctaataatttgaaaaaat 269  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  5096170 ggacattgacacgtcgacaccgctaataatttgaaaaaat 5096131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 21945476 - 21945555
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||| ||||| |||||||||| | ||| || ||||||||||||||||||| | |||||| | |||||||| |||||||    
T  21945476 cggacatgacacagacactgacatgccgacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgtc 21945555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 220 - 290
Target Start/End: Complemental strand, 22440684 - 22440613
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattata 290  Q
    ||||||||| ||||||||| || |||| |||| ||||||||||| ||||||| |||||| | ||||||||||    
T  22440684 gacacgacatggacactgatacatcgacaccgttaataatttgagaaaatcacataattcagtgtaattata 22440613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 30298926 - 30298969
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaa 268  Q
    |||||||||||||||||| ||| || ||||||||||||||||||    
T  30298926 gacacggacactgacacgccgacacagctaataatttgaaaaaa 30298969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 30327794 - 30327837
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaa 268  Q
    |||||||||||||||||| ||| || ||||||||||||||||||    
T  30327794 gacacggacactgacacgccgacacagctaataatttgaaaaaa 30327837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 296
Target Start/End: Original strand, 33950117 - 33950188
Alignment:
Q  226 acacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||| |||||||||| || |  ||||||||||||||| ||||||| ||||||||||||||| ||| |||||    
T  33950117 acacgaacactgacacttcaacgccgctaataatttgagaaaatcacataatttaatgtaatcatatgtgtc 33950188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 14126196 - 14126118
Alignment:
Q  219 ggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||||||||| |||||| ||||| ||| || | ||||||||||| ||| ||| |||||| | ||||||||||||||||    
T  14126196 ggacacgacacagacactaacacgccgacactgttaataatttgataaagtcacataattcagtgtaattataagtgtc 14126118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 40179715 - 40179649
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattata 290  Q
    ||||||||||||||||||| || |||  ||||| ||||||||||||| |||||| | ||||||||||    
T  40179715 gacacggacactgacacgttgacaccattaatagtttgaaaaaatcacataattcagtgtaattata 40179649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 365
Target Start/End: Complemental strand, 753020 - 752871
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaa-tca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacat 315  Q
    ||||||||||||  || || ||||  ||| || ||||||||||| |||||| ||| |||||| | |||||||| ||||||  || || |||| ||||||     
T  753020 cggacacgacacatactctaacacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgttggtgtcttgtacacgacac 752921  T
Q  316 gtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
     |||||||||| |  | || |||||||| | |||||||||||||||||||    
T  752920 atgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 752871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 12077808 - 12077869
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaa 285  Q
    |||||| ||||||||||||| |||| | ||||||||||| ||||||| |||||| |||||||    
T  12077808 gacacgaacactgacacgtcaatactgttaataatttgagaaaatcacataattcaatgtaa 12077869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 12628694 - 12628618
Alignment:
Q  194 tctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    ||||||||||| |||  |||||| |||||| ||||| |||||||||| | ||| || | |||||||||||||||||||    
T  12628694 tctatgaagcacggatacggata-cggacatgacactgacactgacatgccgacacagttaataatttgaaaaaatca 12628618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 267
Target Start/End: Original strand, 28720849 - 28720898
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaa 267  Q
    ||||||||||||| ||||||||| | ||| || |||||||||||||||||    
T  28720849 cggacacgacacgaacactgacatgccgacacagctaataatttgaaaaa 28720898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 28964301 - 28964252
Alignment:
Q  251 gctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgt 299  Q
    ||||||||||||||||||||| |||||| | |||||||| ||||||||||    
T  28964301 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtctgt 28964252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 268
Target Start/End: Complemental strand, 36509168 - 36509131
Alignment:
Q  231 gacactgacacgtcgataccgctaataatttgaaaaaa 268  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  36509168 gacactgacatgtcgataccgcaaataatttgaaaaaa 36509131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 54580075 - 54580030
Alignment:
Q  252 ctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||||||||||||||| |||||| | ||||||||||||||||    
T  54580075 ctaataatttgaaaaaatcacataattcagtgtaattataagtgtc 54580030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 365
Target Start/End: Complemental strand, 715661 - 715545
Alignment:
Q  251 gctaataatttgaaaaaa-tca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgtccgacaccgaaatacacctaatccaaaga 348  Q
    ||||||||||| |||||| ||| |||||| | |||||||| ||||||  || || |||| ||||||  |||||||||| |  | || |||||||| | ||    
T  715661 gctaataatttaaaaaaaatcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgagga 715562  T
Q  349 gtgtccgtgcttcatag 365  Q
    |||||||||||||||||    
T  715561 gtgtccgtgcttcatag 715545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 6485662 - 6485618
Alignment:
Q  253 taataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||||||||||||||||| |||||||| |||||||| |||||||    
T  6485662 taataatttgaaaaaatcacataatttagtgtaattacaagtgtc 6485618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 295
Target Start/End: Original strand, 19482643 - 19482719
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgt 295  Q
    |||||||||| |||||||||||| ||| ||  ||||||||||||||| |||| ||||||   |||||||| ||||||    
T  19482643 gacacgacacagacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgt 19482719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 241567 - 241656
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    ||||||||||||||||||||||||| ||| || |||||||||||| |||||||| |||||||| ||||||||| |||||| || ||||||    
T  241567 cggacacgacacggacactgacacgccgacacagctaataatttggaaaaatcacataatttagtgtaattatgagtgtcggtgtcgtgt 241656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 363
Target Start/End: Complemental strand, 21191142 - 21190998
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatg 316  Q
    ||||||||||||||||||||||| | ||| || ||||||||||||||||||||| |||||| | |||||||| ||||||| || ||  | | || ||| |    
T  21191142 cggacacgacacggacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc--ggacacaacacg 21191045  T
Q  317 tgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcat 363  Q
    |||||||| |||  | || |||||||| | |||||||||||||||||    
T  21191044 tgtccgactccgggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 194 - 291
Target Start/End: Original strand, 22013363 - 22013461
Alignment:
Q  194 tctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataa 291  Q
    ||||||||||| |||  |||| | ||||||||||||||||||||||||| ||| || |||||||||||| |||||| | |||||||| |||||||||||    
T  22013363 tctatgaagcacggatacggacaccggacacgacacggacactgacacgccgacacagctaataatttggaaaaattacataatttagtgtaattataa 22013461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 225 - 296
Target Start/End: Original strand, 14674249 - 14674321
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||||||||||||| ||| || ||||||||||||||||||||| |||||||| |||||||| |||||||    
T  14674249 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtc 14674321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 218 - 367
Target Start/End: Original strand, 21522723 - 21522882
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt---------a 307  Q
    ||||||||||||||||||||||||| ||| || ||||||||||| ||||||| | |||||| | |||||||| || |||| || ||||||         |    
T  21522723 cggacacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcgga 21522822  T
Q  308 tacgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatagct 367  Q
     |||||| ||||||| |||||  | || ||||||||||||||||||||||| ||||||||    
T  21522823 cacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcatagct 21522882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 218 - 367
Target Start/End: Original strand, 21533289 - 21533448
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt---------a 307  Q
    ||||||||||||||||||||||||| ||| || ||||||||||| ||||||| | |||||| | |||||||| || |||| || ||||||         |    
T  21533289 cggacacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcgga 21533388  T
Q  308 tacgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatagct 367  Q
     |||||| ||||||| |||||  | || ||||||||||||||||||||||| ||||||||    
T  21533389 cacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcatagct 21533448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 228 - 365
Target Start/End: Original strand, 39698524 - 39698671
Alignment:
Q  228 acggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt---------atacgacatgt 317  Q
    |||||||||||||||  || || ||||||||||||||||||||| |||||| | |||||||| ||||||| || ||||||         | |||||||||    
T  39698524 acggacactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacatgt 39698623  T
Q  318 gtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
     ||||||||||| | || |||||||| | |||||||||||||||||||    
T  39698624 atccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 39698671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 13287485 - 13287396
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    ||||||||||||||||||| ||||||||| || | ||||||||||||||||||| |||||| | ||||| || ||||||| || ||||||    
T  13287485 cggacacgacacggacactaacacgtcgacacagataataatttgaaaaaatcacataattcagtgtaactacaagtgtcggtgtcgtgt 13287396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 296
Target Start/End: Complemental strand, 19820503 - 19820403
Alignment:
Q  195 ctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatcaataatttaatgtaattataagtg 294  Q
    |||||||||| |||  |||| | ||||||||||||||||||||||||  ||| |||||||||||||||| |||||| |||||| | |  |||||||||||    
T  19820503 ctatgaagcacggatacggacaccggacacgacacggacactgacactccgacaccgctaataatttgagaaaatc-ataattaagtacaattataagtg 19820405  T
Q  295 tc 296  Q
    ||    
T  19820404 tc 19820403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 231 - 365
Target Start/End: Original strand, 31084309 - 31084447
Alignment:
Q  231 gacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt---atacgacatgtgtccgacac 326  Q
    |||||||||||| ||| || ||||||||||||||||||||| |||||| |||||||||| |||||||  | ||||||   | |||||| |||||||||||    
T  31084309 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcgtgtcggacacgacacgtgtccgacac 31084408  T
Q  327 cgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
     |  | |  |||||||| | ||||||||||| |||||||    
T  31084409 tgggacatgcctaatccgaggagtgtccgtggttcatag 31084447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 296
Target Start/End: Complemental strand, 6326395 - 6326304
Alignment:
Q  206 ggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||| |||||| ||||||||||||||||||||||||| ||| | ||||| |||||||| ||||| | |||||| | |||||||| |||||||    
T  6326395 ggacacggataccggacacgacacggacactgacacgccgacatcgctagtaatttgagaaaattacataattcagtgtaattacaagtgtc 6326304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 299
Target Start/End: Original strand, 27144443 - 27144518
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgt 299  Q
    ||||| |||||||||||| ||| ||||||||||||||||  |||||| |||||||| |||||||||| ||||||||    
T  27144443 gacacagacactgacacgccgacaccgctaataatttgaggaaatcacataatttagtgtaattatatgtgtctgt 27144518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 255 - 365
Target Start/End: Original strand, 43564891 - 43565000
Alignment:
Q  255 ataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgtccgacaccgaaatacacctaatccaaagagtgtc 353  Q
    |||||||| |||||||| |||||||| |||||||||||||||| || |||   | |||||||||||||||| |||  | || |||||||| |  ||||||    
T  43564891 ataatttggaaaaatcacataatttagtgtaattataagtgtcggtgtcgg--acacgacatgtgtccgacgccgggacacgcctaatccgagaagtgtc 43564988  T
Q  354 cgtgcttcatag 365  Q
    ||||||||||||    
T  43564989 cgtgcttcatag 43565000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 6247595 - 6247674
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||||||| ||| ||||||||||| ||| ||  |||||||||||||||||||| |||||| | |||||||| |||||||    
T  6247595 cggacacgatacgcacactgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaattacaagtgtc 6247674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 229 - 303
Target Start/End: Original strand, 30098310 - 30098385
Alignment:
Q  229 cggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcg 303  Q
    |||||||||||||| ||| |||| ||||||||||| ||||||| |||||| ||||||||||||  |||| ||||||    
T  30098310 cggacactgacacgacgaaaccgttaataatttgagaaaatcacataattcaatgtaattatagatgtcggtatcg 30098385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 36642848 - 36642769
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||||||||||||||||||||||| ||| || | ||||||||||||||| | | ||| |||| ||||| ||||||||||    
T  36642848 cggacacgacacggacactgacacgccgacacagttaataatttgaaaaagtgacatattttagtgtaaatataagtgtc 36642769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 225 - 295
Target Start/End: Original strand, 43001780 - 43001851
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgt 295  Q
    |||||||||||||||| ||||| || ||||||||||||||||||| | |||||| | |||||||| ||||||    
T  43001780 gacacggacactgacatgtcgacactgctaataatttgaaaaaattacataattcagtgtaattacaagtgt 43001851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 296
Target Start/End: Complemental strand, 5468051 - 5467985
Alignment:
Q  231 gacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||||||||| |||||| ||||||||||| ||||||| |||||| | |||||||||| |||||    
T  5468051 gacactgacacgtcaataccgataataatttgataaaatcacataattcagtgtaattataggtgtc 5467985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 15382450 - 15382500
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaa 268  Q
    ||||||||||||||||| ||||||| ||| || ||||||||||||||||||    
T  15382450 cggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaa 15382500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 271
Target Start/End: Complemental strand, 19552626 - 19552576
Alignment:
Q  221 acacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    |||||||||||||||||||||| ||| || | |||||||||||||||||||    
T  19552626 acacgacacggacactgacacgccgacacagttaataatttgaaaaaatca 19552576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 303
Target Start/End: Complemental strand, 24906387 - 24906301
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcg 303  Q
    ||||||||||||| ||||||||||| | | || | ||||||||||||||||| | |||||| | |||||||| ||||||| ||||||    
T  24906387 cggacacgacacgaacactgacacgccaacacagataataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtatcg 24906301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 293
Target Start/End: Original strand, 14422877 - 14422951
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagt 293  Q
    ||||||||||| ||||||||||||  |||||| |||||||||||  |||||||| |||||| | |||||||||||||    
T  14422877 cggacacgacaaggacactgacacaccgatacagctaataattt--aaaaatcacataattcagtgtaattataagt 14422951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 15410532 - 15410491
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataattt 261  Q
    ||||||||||||||||||||||| ||| ||||||||||||||    
T  15410532 gacacgacacggacactgacacgccgacaccgctaataattt 15410491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 226 - 306
Target Start/End: Original strand, 19579682 - 19579763
Alignment:
Q  226 acacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    ||||||||||||| ||| ||| || ||||||||||||| ||||||| |||||||| || ||||| ||||||| || ||||||    
T  19579682 acacggacactgatacgccgacacagctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtcgtgt 19579763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 15405138 - 15405062
Alignment:
Q  219 ggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||||||||||||| ||||   || ||  |||||||||||||||||||| |||||| |||||||||| |||||||    
T  15405138 ggacacgacacggacactaacact--gacacaactaataatttgaaaaaatcatataattcaatgtaattacaagtgtc 15405062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 225 - 366
Target Start/End: Complemental strand, 21576824 - 21576684
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgtccga 323  Q
    |||||| ||||||| ||| | | || ||||||||||||||||||||| |||||| | |||||||| |||||||  | ||  | | |||||| ||||| ||    
T  21576824 gacacgaacactgatacgccaacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtc--ggacacgacacgtgtctga 21576727  T
Q  324 caccgaaatacacctaatccaaagagtgtccgtgcttcatagc 366  Q
    ||| |  | || |||||||| | ||||||||||||||||||||    
T  21576726 cactgggacacgcctaatccgaggagtgtccgtgcttcatagc 21576684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 271
Target Start/End: Complemental strand, 7175098 - 7175052
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    ||||||||||||||||| |||| |||| ||||||||||| |||||||    
T  7175098 gacacggacactgacacatcgacaccgttaataatttgagaaaatca 7175052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 302
Target Start/End: Original strand, 16881128 - 16881194
Alignment:
Q  237 gacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatc 302  Q
    |||||||| |||||  ||||||||||||||||| | ||||||||||||||| ||| || ||||||||    
T  16881128 gacacgtcaatacccataataatttgaaaaaatgacataatttaatgtaatcatatgtatctgtatc 16881194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 23012461 - 23012415
Alignment:
Q  251 gctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||||||||||| ||||||| ||||||||||||||||||| |||||    
T  23012461 gctaataatttgagaaaatcatataatttaatgtaattatatgtgtc 23012415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 288
Target Start/End: Original strand, 41995449 - 41995515
Alignment:
Q  223 acgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaatta 288  Q
    ||||||| |||||||||||| ||| ||  ||||||||| |||||||||| |||||| ||||||||||    
T  41995449 acgacacagacactgacacgccgacacaactaataattcgaaaaaatcacataattcaatgtaatta 41995515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 306
Target Start/End: Original strand, 3966488 - 3966565
Alignment:
Q  230 ggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    ||||||||||| | ||| |||||||||||||||| ||||||| | |||| | |||||||||| ||||| || ||||||    
T  3966488 ggacactgacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgt 3966565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 271
Target Start/End: Original strand, 17123009 - 17123074
Alignment:
Q  206 ggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    |||| |||| ||||||||  ||| ||||||||||||| | | |||||||||||||||| |||||||    
T  17123009 ggacacggacatcggacataacatggacactgacacgccaacaccgctaataatttgagaaaatca 17123074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 366
Target Start/End: Original strand, 39205866 - 39206005
Alignment:
Q  231 gacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt---atacgacatgtgtccgacac 326  Q
    ||||| |||||||||| || ||||||||||||| ||||||| ||||||   |||||||||| ||||  || ||||||   | |||||| ||| |||||||    
T  39205866 gacacggacacgtcgacactgctaataatttgagaaaatcatataattaggtgtaattatatgtgttggtgtcgtgtccgacacgacacgtgcccgacac 39205965  T
Q  327 cgaaatacacctaatccaaagagtgtccgtgcttcatagc 366  Q
    ||  ||||   |||||||| |||||||  |||||||||||    
T  39205966 cgggatacgtttaatccaaggagtgtctatgcttcatagc 39206005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 2436908 - 2436948
Alignment:
Q  231 gacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    |||||||||||| ||| ||||||||||||||| ||||||||    
T  2436908 gacactgacacgccgacaccgctaataatttgcaaaaatca 2436948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 296
Target Start/End: Original strand, 8420011 - 8420079
Alignment:
Q  229 cggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||| ||||||| ||| |  ||||||||||||||||||| | |||||| |||||||||| |||||||    
T  8420011 cggacaatgacacgccgacatagctaataatttgaaaaaataacataattcaatgtaattacaagtgtc 8420079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 296
Target Start/End: Complemental strand, 16203874 - 16203802
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatc-aataatttaatgtaattataagtgtc 296  Q
    |||||||||||| ||| | ||| || ||||||||||||| ||||||  |||||||| |||||||||| |||||    
T  16203874 gacacggacactaacatgccgacactgctaataatttgagaaaatctcataatttagtgtaattatatgtgtc 16203802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 365
Target Start/End: Complemental strand, 32630841 - 32630675
Alignment:
Q  194 tctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataag 292  Q
    ||||||||||| |||  |||||| |||| |||||||    | |||||||  || |||| ||||||||||| ||||| | |||||| |||||||||||| |    
T  32630841 tctatgaagcacggatacggataccggatacgacac----attgacacgctgacaccgataataatttgagaaaattatataattcaatgtaattatatg 32630746  T
Q  293 tgtctgtatcgtgtatacgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    |||| || ||  | |||||||| ||||||||||  || | ||||||||| | | |||||||  ||||||||||    
T  32630745 tgtcagtgtc--ggatacgacacgtgtccgacattgagacacacctaattcgaggagtgtctatgcttcatag 32630675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 271
Target Start/End: Complemental strand, 37328953 - 37328877
Alignment:
Q  195 ctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    |||||||||| |||| |||| | || |||||||||||||||||| ||  ||| || || ||||||||| ||||||||    
T  37328953 ctatgaagcacggacacggacaccgaacacgacacggacactgatacaccgacacagcaaataatttgtaaaaatca 37328877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 38749635 - 38749571
Alignment:
Q  232 acactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgt 295  Q
    |||| |||| ||||| |||| ||||||||||||||||| | |||||| |||||||||||| ||||    
T  38749635 acacggacatgtcgacaccgataataatttgaaaaaatgacataattcaatgtaattatatgtgt 38749571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 40000616 - 40000568
Alignment:
Q  223 acgacacggacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    |||||||||||||||||| ||||| ||   |||||||||||||||||||    
T  40000616 acgacacggacactgacatgtcgacactcttaataatttgaaaaaatca 40000568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 288
Target Start/End: Complemental strand, 42488136 - 42488068
Alignment:
Q  221 acacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaatta 288  Q
    ||||||||| |||||||||||||||| |||| | ||||||| | ||||| | |||||| ||||||||||    
T  42488136 acacgacacagacactgacacgtcgacaccgttgataatttaataaaattatataattcaatgtaatta 42488068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 221 - 364
Target Start/End: Complemental strand, 545 - 403
Alignment:
Q  221 acacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgt 319  Q
    ||||| |||||||||||| ||| ||| || ||||||||||||||||||||| | |||| | |||||||| ||||||| || ||  | | |||||  ||||    
T  545 acacgccacggacactgatacgccgacactgctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtc--ggacacgacgcgtgt 448  T
Q  320 ccgacaccgaaatacacctaatccaaagagtgtccgtgcttcata 364  Q
    |||||||||  | ||||||||||| | ||||||||||||||||||    
T  447 ccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 20145 - 20234
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    ||||||||||||||||| ||||||| ||| || ||||||||||||||||||||| |||||| | |||||||| ||||||| || ||||||    
T  20145 cggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgt 20234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 178905 - 178825
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca--ataatttaatgtaattataagtgtc 296  Q
    ||||||||||||||||||||||||| ||| ||  ||||||||||||||||||||  |||||| | |||||||| |||||||    
T  178905 cggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatcatcataattcagtgtaattacaagtgtc 178825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 299
Target Start/End: Complemental strand, 192333 - 192253
Alignment:
Q  220 gacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgt 299  Q
    ||||||| ||||||||||||||| ||| |||| ||||||||||| ||||| | ||||||   |||||||| ||||||||||    
T  192333 gacacgatacggacactgacacgccgacaccgttaataatttgagaaaattacataattcggtgtaattacaagtgtctgt 192253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 295
Target Start/End: Original strand, 51791 - 51862
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgt 295  Q
    |||||||||||||||||| ||| || ||||||||||||||||||||| |||||| | |||||||| ||||||    
T  51791 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 51862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 288
Target Start/End: Original strand, 46643 - 46726
Alignment:
Q  206 ggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaatta 288  Q
    |||| |||| ||||||||||||||||||| ||||||| ||| || | ||||||||||||||||||| |||||| | ||||||||    
T  46643 ggacacggacatcggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaatta 46726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 225354 - 225275
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||||||||||||||||||||||| ||| || | ||||||||||| ||||| | |||||  ||||||||||||||||||    
T  225354 cggacacgacacggacactgacacgccgacacagataataatttgagaaaatgacataatacaatgtaattataagtgtc 225275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 263453 - 263369
Alignment:
Q  223 acgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    |||||||||||||||||| ||| | || ||||||||||||| |||| || |||||| | |||||||||||||||| || ||||||    
T  263453 acgacacggacactgacatgtcaacactgctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgt 263369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 295
Target Start/End: Original strand, 19549 - 19626
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgt 295  Q
    |||||||||||| |||||||||||| ||||||  ||||||||||| |||||||| |||||| | |||||||| ||||||    
T  19549 cggacacgacactgacactgacacgccgatacaactaataatttg-aaaaatcacataattcagtgtaattacaagtgt 19626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 53170 - 53232
Alignment:
Q  235 ctgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||| ||||||||| |||||||||| ||||||| |||||| | ||||||||||||||||    
T  53170 ctgacacgccgataccgccaataatttgagaaaatcacataattcagtgtaattataagtgtc 53232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 23393 - 23482
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    |||||||||||| |||||||||||| ||| || | |||||| |  ||||||||| |||||| | |||||||||||||||| || ||||||    
T  23393 cggacacgacacagacactgacacgccgacacagataataactcaaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgt 23482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 92790 - 92859
Alignment:
Q  228 acggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||||||||||||| ||| |||||||||||||||| ||||| | |||||| | |||||||| |||||||    
T  92790 acggacactgacacgccgacaccgctaataatttgagaaaattacataattcagtgtaattacaagtgtc 92859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 295
Target Start/End: Complemental strand, 7108 - 7040
Alignment:
Q  228 acggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgt 295  Q
    ||||||||||| ||||||| || ||||||||||||||||||| | |||||||| | |||||| ||||||    
T  7108 acggacactgatacgtcgacacagctaataatttgaaaaaattacataatttagtataattacaagtgt 7040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 365
Target Start/End: Original strand, 8664 - 8720
Alignment:
Q  309 acgacatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
    |||||| ||||||||||| |  |||| |||||||||| |||||||||||||||||||    
T  8664 acgacacgtgtccgacactgggatacgcctaatccaaggagtgtccgtgcttcatag 8720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 68224 - 68172
Alignment:
Q  312 acatgtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcata 364  Q
    |||| ||| |||||| ||||||||||||||||||||| ||||||| |||||||    
T  68224 acatatgttcgacactgaaatacacctaatccaaagaatgtccgtacttcata 68172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 130455 - 130534
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||||||||||||||| ||||| | ||| || | ||||| ||||||||||||| |||||| | |||||||| |||||||    
T  130455 cggacacgacacggacaatgacaagccgacacagttaatagtttgaaaaaatcacataattcagtgtaattacaagtgtc 130534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 365
Target Start/End: Complemental strand, 4970 - 4821
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaa-tca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacat 315  Q
    ||||||||||||  || || ||||  ||| || ||||||||||| |||||| ||| |||||| | |||||||| ||||||  || || |||| ||||||     
T  4970 cggacacgacacatactctaacacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgttggtgtcttgtacacgacac 4871  T
Q  316 gtgtccgacaccgaaatacacctaatccaaagagtgtccgtgcttcatag 365  Q
     |||||||||| |  | || |||||||| | |||||||||||||||||||    
T  4870 atgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 4821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 365
Target Start/End: Original strand, 14537 - 14646
Alignment:
Q  252 ctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgtatacgacatgtgtccgacaccgaaatacacctaatccaaagagt 350  Q
    |||||||||||||||||||| |||||| | |||||||| |||||   || |||   | |||||| |||||||||||||| | || ||||||| || ||||    
T  14537 ctaataatttgaaaaaatcacataattcagtgtaattacaagtg---gtgtcgg--acacgacacgtgtccgacaccgagacacgcctaatcgaaggagt 14631  T
Q  351 gtccgtgcttcatag 365  Q
    || ||||||||||||    
T  14632 gtacgtgcttcatag 14646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 8639 - 8728
Alignment:
Q  218 cggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtctgtatcgtgt 306  Q
    ||||||||||| ||||||||||||||||| ||  ||||||||||   ||||||| ||| || | | |||||||||||||| || ||||||    
T  8639 cggacacgacatggacactgacacgtcgacacttctaataatttaggaaaatcacatagttcagtataattataagtgtcggtgtcgtgt 8728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 17801 - 17756
Alignment:
Q  252 ctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    |||||||||||||||||||| |||||||| |||||||| |||||||    
T  17801 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtc 17756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 8132 - 8088
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaat 269  Q
    ||||||||||| ||||||||||||| | ||||||||||| |||||    
T  8132 gacacggacaccgacacgtcgatacggataataatttgagaaaat 8088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 271
Target Start/End: Original strand, 13350 - 13426
Alignment:
Q  195 ctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    |||||||||| |||  |||| | |||| | |||||||||||||||||| ||| ||  |||||||||||| |||||||    
T  13350 ctatgaagcacggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatca 13426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 295
Target Start/End: Complemental strand, 7363 - 7319
Alignment:
Q  252 ctaataatttgaaaaaatca-ataatttaatgtaattataagtgt 295  Q
    ||||||||||| |||||||| |||||||| |||||||||||||||    
T  7363 ctaataatttggaaaaatcacataatttagtgtaattataagtgt 7319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 271
Target Start/End: Complemental strand, 21977 - 21901
Alignment:
Q  195 ctatgaagcatggacccggatatcggacacgacacggacactgacacgtcgataccgctaataatttgaaaaaatca 271  Q
    |||||||||| |||  |||| | |||| | |||||||||||||||||| ||| ||  |||||||||||| |||||||    
T  21977 ctatgaagcacggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatca 21901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 296
Target Start/End: Original strand, 26373 - 26445
Alignment:
Q  225 gacacggacactgacacgtcgataccgctaataatttgaaaaaatca-ataatttaatgtaattataagtgtc 296  Q
    ||||| |||| ||||||||||| ||| |||||||||||| ||||||| |||||| |||||  ||||| |||||    
T  26373 gacacagacagtgacacgtcgacaccactaataatttgagaaaatcacataattcaatgtcgttatatgtgtc 26445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 246
Target Start/End: Complemental strand, 45621 - 45589
Alignment:
Q  214 atatcggacacgacacggacactgacacgtcga 246  Q
    ||||||||||| |||||||||||||||||||||    
T  45621 atatcggacacaacacggacactgacacgtcga 45589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 269
Target Start/End: Original strand, 63737 - 63797
Alignment:
Q  210 ccggatatcggacacgacacggacactgacacgtc-gataccgctaataatttgaaaaaat 269  Q
    ||||||| |||| |||||||||||| |||||||||  | |||||||||||||||| |||||    
T  63737 ccggataccggatacgacacggacaatgacacgtctaacaccgctaataatttgagaaaat 63797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University