View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11859_high_3 (Length: 492)
Name: NF11859_high_3
Description: NF11859
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11859_high_3 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 390; Significance: 0; HSPs: 10)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 390; E-Value: 0
Query Start/End: Original strand, 22 - 479
Target Start/End: Original strand, 2437003 - 2437454
Alignment:
| Q |
22 |
gtgccactaatcacgtggcctctttttgccgagcagagaatgaattcggttttgttgagtgagggactaaaagtgggactgaggccaagagttgatgaaa |
121 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
2437003 |
gtgccactaatcacatggcctctttttgccgagcagagaacgaattcggttttgttgagtgagggactaaaagtgggactgaggccaagagttcatgaaa |
2437102 |
T |
|
| Q |
122 |
atggcattgtggaaagggtagaggttgctaaggtgatcaagtgtctcatggaaggagaagaaggcgaaaaattgcggagtaatatgaaagaactaaaaga |
221 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| | ||||||||||||||||||||||||| |
|
|
| T |
2437103 |
atggcattgtggaaagggtagaggttgctaaggtgatcaagtgtctcatggaaggagaagaa--ctaaa----gtggagtaatatgaaagaactaaaaga |
2437196 |
T |
|
| Q |
222 |
agctgcttctaatgcactcaaagaagatggttcttctacaaagactatttctcaattaacactcaagtggagaaatttggtgcaggagaacaagttttaa |
321 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
2437197 |
agctgcttctaatgcactcaaagaagatggttcttcgacaaagactatttctcaattaacactcaagtggagaagcttggtgcaggaaaacaagttttaa |
2437296 |
T |
|
| Q |
322 |
ggaatgattttgataagatttttgctttataaccattctagtttttctgtttcttcattggaataagataatcgttataatttgccgtattaagctcata |
421 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
2437297 |
ggaatgattttgataagatttttgctttataaccattctagtttttctgtttcttcattggaataagataatcgttataattttccgtattaagctcata |
2437396 |
T |
|
| Q |
422 |
ttatgaagcatgcttataagactttctatttgacagttgagttgagttcttgtgatct |
479 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2437397 |
ttatgaagcatgcttataagactttctatttgacagttgagttgagttcttgtgatct |
2437454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 22 - 387
Target Start/End: Complemental strand, 2011433 - 2011069
Alignment:
| Q |
22 |
gtgccactaatcacgtggcctctttttgccgagcagagaatgaattcggttttgttgagtgagggactaaaagtgggactgaggccaagagttgatgaaa |
121 |
Q |
| |
|
|||||||||||||| |||||| | ||||| || ||| |||||||| | |||||| ||| |||||| || |||||||||||||||||||||||| | |||| |
|
|
| T |
2011433 |
gtgccactaatcacatggcctatgtttgctgaacagggaatgaatgcagttttggtgactgagggccttaaagtgggactgaggccaagagttaacgaaa |
2011334 |
T |
|
| Q |
122 |
atggcattgtggaaagggtagaggttgctaaggtgatcaagtgtctcatggaaggagaagaaggcgaaaaattgcggagtaatatgaaagaactaaaaga |
221 |
Q |
| |
|
|||| ||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||| | || ||||||| | ||||||||| ||| ||||||| |
|
|
| T |
2011333 |
atggtattgtcgaaagggtggaggttgctaaggtgatcaagcgtctcatggaaggagaagagtgtgagaaattgcacaataatatgaaggaattaaaaga |
2011234 |
T |
|
| Q |
222 |
agctgcttctaatgcactcaaagaagatggttcttctacaaagactatttctcaattaacactcaagtggagaaatttggtgcaggagaacaagttttaa |
321 |
Q |
| |
|
|| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| || ||||| |
|
|
| T |
2011233 |
agttgcttctaatgcactcaaagaagatggatcttctacaaagactatttctcaattaacactcaagtggagaaatttggtgcagaaaaaccagatttaa |
2011134 |
T |
|
| Q |
322 |
ggaatgattttgataagatttttgctttataaccattctagtttttctgtttcttcattggaataa |
387 |
Q |
| |
|
||||| ||||| ||| |||||| ||| |||||||| |||| |||||||| ||||||||||||| |
|
|
| T |
2011133 |
ggaattcttttgctaatatttttcttttttaaccattatagtcattctgttt-ttcattggaataa |
2011069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 22 - 308
Target Start/End: Complemental strand, 2004438 - 2004152
Alignment:
| Q |
22 |
gtgccactaatcacgtggcctctttttgccgagcagagaatgaattcggttttgttgagtgagggactaaaagtgggactgaggccaagagttgatgaaa |
121 |
Q |
| |
|
||||||||||| || |||||||| ||||| ||||||| ||||||| |||||||||||||||| ||||||||||||||| ||||| |||| ||| |||||| |
|
|
| T |
2004438 |
gtgccactaataacatggcctctatttgctgagcagaaaatgaatgcggttttgttgagtgaaggactaaaagtgggattgagggcaagtgttaatgaaa |
2004339 |
T |
|
| Q |
122 |
atggcattgtggaaagggtagaggttgctaaggtgatcaagtgtctcatggaaggagaagaaggcgaaaaattgcggagtaatatgaaagaactaaaaga |
221 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||| | ||| ||||| ||| ||||||| |
|
|
| T |
2004338 |
atggcatagtggaaagggtagaggttgctaaggtgatcaagtgtctcatggaaggggaagaaggtgagaaattgcgcaataacatgaaggaattaaaaga |
2004239 |
T |
|
| Q |
222 |
agctgcttctaatgcactcaaagaagatggttcttctacaaagactatttctcaattaacactcaagtggagaaatttggtgcagga |
308 |
Q |
| |
|
| ||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||| |||| |
|
|
| T |
2004238 |
atctgcttcgaatgctgtcaaagaagatggttcttctacaaacactatttctcaattagcactcaagtggagaaatttagtgtagga |
2004152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 21 - 387
Target Start/End: Original strand, 1965260 - 1965626
Alignment:
| Q |
21 |
agtgccactaatcacgtggcctctttttgccgagcagagaatgaattcggttttgttgagtgagggactaaaagtgggactgaggccaagagttgatgaa |
120 |
Q |
| |
|
||||||||||||||| |||||| | ||||| || ||| |||||||| | |||||| ||| || ||| || |||||||||||||| ||||||||| | ||| |
|
|
| T |
1965260 |
agtgccactaatcacatggcctatgtttgctgaacagggaatgaatgcagttttggtgactgggggccttaaagtgggactgagaccaagagttaacgaa |
1965359 |
T |
|
| Q |
121 |
aatggcattgtggaaagggtagaggttgctaaggtgatcaagtgtctcatggaaggagaagaaggcgaaaaattgcggagtaatatgaaagaactaaaag |
220 |
Q |
| |
|
|| || ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| | || ||||||| | ||||||||| || |||||| |
|
|
| T |
1965360 |
aacggtattgtcgaaagggtggaggttgctaaggtgatcaagtgtctcatggaaggagaagagtgtgagaaattgcacaataatatgaaggagttaaaag |
1965459 |
T |
|
| Q |
221 |
aagctgcttctaatgcactcaaagaagatggttcttctacaaagactatttctcaattaacactcaagtggagaaatttggtgcaggagaacaagtttta |
320 |
Q |
| |
|
|| |||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| || |||| |
|
|
| T |
1965460 |
gagttgcttccaatgcactcaaagaagatggatcttctacaaagactatatctcaattaacactcaagtggagaaatttggtgcaggaaaactagattta |
1965559 |
T |
|
| Q |
321 |
aggaatgattttgataagatttttgctttataaccattctagtttttctgtttcttcattggaataa |
387 |
Q |
| |
|
| ||||| ||||| ||| |||||| ||| |||||||| |||| |||||||| ||||||||||||| |
|
|
| T |
1965560 |
acgaatgcttttgctaatatttttcttttttaaccattatagtcattctgttttttcattggaataa |
1965626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 29 - 303
Target Start/End: Complemental strand, 2007811 - 2007537
Alignment:
| Q |
29 |
taatcacgtggcctctttttgccgagcagagaatgaattcggttttgttgagtgagggactaaaagtgggactgaggccaagagttgatgaaaatggcat |
128 |
Q |
| |
|
|||||||||||||||| ||||| ||||||| ||||||| |||||||||||||||| ||||||||||||||||||||| |||| ||| ||||||||||||| |
|
|
| T |
2007811 |
taatcacgtggcctctatttgctgagcagaaaatgaatgcggttttgttgagtgaaggactaaaagtgggactgagggcaagtgttaatgaaaatggcat |
2007712 |
T |
|
| Q |
129 |
tgtggaaagggtagaggttgctaaggtgatcaagtgtctcatggaaggagaagaaggcgaaaaattgcggagtaatatgaaagaactaaaagaagctgct |
228 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||| || || || ||||| || | ||| ||||| ||| |||||||||||||| |
|
|
| T |
2007711 |
agtggaaagggtagaggttgctaaggtgatcaagtatctcatggaaggagacgagggtgagaaattacgcaataacatgaaggaattaaaagaagctgct |
2007612 |
T |
|
| Q |
229 |
tctaatgcactcaaagaagatggttcttctacaaagactatttctcaattaacactcaagtggagaaatttggtg |
303 |
Q |
| |
|
|| |||||| ||||||||||||||||||||||||| |||||||||||| || |||| |||||||||||||||||| |
|
|
| T |
2007611 |
tcaaatgcagtcaaagaagatggttcttctacaaaaactatttctcaaatagcacttaagtggagaaatttggtg |
2007537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 22 - 308
Target Start/End: Original strand, 1969203 - 1969489
Alignment:
| Q |
22 |
gtgccactaatcacgtggcctctttttgccgagcagagaatgaattcggttttgttgagtgagggactaaaagtgggactgaggccaagagttgatgaaa |
121 |
Q |
| |
|
|||||||||||||| |||||| | ||||| ||||||| ||||||| | |||||| ||||||| || ||||||||||||||||||||||||||| |||||| |
|
|
| T |
1969203 |
gtgccactaatcacatggcctttgtttgctgagcagaaaatgaatgccgttttgctgagtgaaggcctaaaagtgggactgaggccaagagttaatgaaa |
1969302 |
T |
|
| Q |
122 |
atggcattgtggaaagggtagaggttgctaaggtgatcaagtgtctcatggaaggagaagaaggcgaaaaattgcggagtaatatgaaagaactaaaaga |
221 |
Q |
| |
|
| |||||||||||||| | |||||||| ||||||||||||| |||||||||||||||||||||| || || ||||| | ||| ||||| ||| ||||||| |
|
|
| T |
1969303 |
acggcattgtggaaagagaagaggttgttaaggtgatcaagcgtctcatggaaggagaagaaggtgagaagttgcgcaataacatgaaggaattaaaaga |
1969402 |
T |
|
| Q |
222 |
agctgcttctaatgcactcaaagaagatggttcttctacaaagactatttctcaattaacactcaagtggagaaatttggtgcagga |
308 |
Q |
| |
|
||||||||| |||||| ||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||| |||| |
|
|
| T |
1969403 |
agctgcttcaaatgcaatcaaagaagatggttcttctacaaaaactatttctcaaatagcactcaagtggagaaatttggtgtagga |
1969489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 22 - 302
Target Start/End: Complemental strand, 2018221 - 2017941
Alignment:
| Q |
22 |
gtgccactaatcacgtggcctctttttgccgagcagagaatgaattcggttttgttgagtgagggactaaaagtgggactgaggccaagagttgatgaaa |
121 |
Q |
| |
|
|||||||||||||| |||||||| ||||| |||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||| | || || | | |
|
|
| T |
2018221 |
gtgccactaatcacatggcctctatttgctgagcagagaacgaatgcggttttgttgagtgaaggactaaaagtgggactgaggccaaaaattaatcaga |
2018122 |
T |
|
| Q |
122 |
atggcattgtggaaagggtagaggttgctaaggtgatcaagtgtctcatggaaggagaagaaggcgaaaaattgcggagtaatatgaaagaactaaaaga |
221 |
Q |
| |
|
||||||||||||||| |||| | |||| || | |||||||||||||||||||| |||||||| | ||| |||| | |||||||| ||| ||||||| |
|
|
| T |
2018121 |
atggcattgtggaaaaggtacaaattgcagagttaatcaagtgtctcatggaaggggaagaaggtgggaaactgcgcaaaaatatgaaggaattaaaaga |
2018022 |
T |
|
| Q |
222 |
agctgcttctaatgcactcaaagaagatggttcttctacaaagactatttctcaattaacactcaagtggagaaatttggt |
302 |
Q |
| |
|
| ||||| || ||||| ||||| ||||| |||| ||||||||| ||||||||||| |||||||||||||||||||||| |
|
|
| T |
2018021 |
atctgctaatagtgcacataaagatgatggatcttttacaaagacactttctcaattagcactcaagtggagaaatttggt |
2017941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 22 - 293
Target Start/End: Original strand, 1963591 - 1963862
Alignment:
| Q |
22 |
gtgccactaatcacgtggcctctttttgccgagcagagaatgaattcggttttgttgagtgagggactaaaagtgggactgaggccaagagttgatgaaa |
121 |
Q |
| |
|
|||||||||||||| |||||||| | ||| |||||||||| ||| | |||||| | |||| || ||||||||||||||||||||||||||| | || | |
|
|
| T |
1963591 |
gtgccactaatcacttggcctctgtatgctgagcagagaacaaatgcagttttgctctgtgaaggcctaaaagtgggactgaggccaagagttaacgaga |
1963690 |
T |
|
| Q |
122 |
atggcattgtggaaagggtagaggttgctaaggtgatcaagtgtctcatggaaggagaagaaggcgaaaaattgcggagtaatatgaaagaactaaaaga |
221 |
Q |
| |
|
|||||||||||||||||||||| ||||| || |||||||||||||||||||||| |||||||| | ||| |||| | ||||||||| ||| | ||||| |
|
|
| T |
1963691 |
atggcattgtggaaagggtagaaattgctgagttgatcaagtgtctcatggaaggggaagaaggtgggaaactgcgtaataatatgaaggaatttaaaga |
1963790 |
T |
|
| Q |
222 |
agctgcttctaatgcactcaaagaagatggttcttctacaaagactatttctcaattaacactcaagtggag |
293 |
Q |
| |
|
||||||| || || || ||||||||||||||| ||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
1963791 |
agctgctagtagtgtacataaagaagatggttctactacaaagactctttctcaattagcactcaagtggag |
1963862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 22 - 296
Target Start/End: Complemental strand, 2014838 - 2014564
Alignment:
| Q |
22 |
gtgccactaatcacgtggcctctttttgccgagcagagaatgaattcggttttgttgagtgagggactaaaagtgggactgaggccaagagttgatgaaa |
121 |
Q |
| |
|
|||||||||||||| |||||||| ||||| |||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||| | || || | | |
|
|
| T |
2014838 |
gtgccactaatcacatggcctctatttgctgagcagagaacgaatgcggttttgttgagtgaaggactaaaagtgggactgaggccaaaaattaatcaga |
2014739 |
T |
|
| Q |
122 |
atggcattgtggaaagggtagaggttgctaaggtgatcaagtgtctcatggaaggagaagaaggcgaaaaattgcggagtaatatgaaagaactaaaaga |
221 |
Q |
| |
|
||||||||||||||| |||| | |||| || | |||||||||||||||||||| |||||||| | ||| |||| | |||||||| ||| ||||||| |
|
|
| T |
2014738 |
atggcattgtggaaaaggtacaaattgcagagttaatcaagtgtctcatggaaggggaagaaggtgggaaactgcgcaaaaatatgaaggaattaaaaga |
2014639 |
T |
|
| Q |
222 |
agctgcttctaatgcactcaaagaagatggttcttctacaaagactatttctcaattaacactcaagtggagaaa |
296 |
Q |
| |
|
| ||||| || ||||| ||||| || || ||| ||||||||||| ||||||||||| || ||||||||||| |
|
|
| T |
2014638 |
atctgctaatagtgcacataaagatgacgggtctgctacaaagactctttctcaattagttcttaagtggagaaa |
2014564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 226 - 263
Target Start/End: Original strand, 23269096 - 23269133
Alignment:
| Q |
226 |
gcttctaatgcactcaaagaagatggttcttctacaaa |
263 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23269096 |
gcttctaatgcactcaaagaagatggttcttctacaaa |
23269133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 165; Significance: 5e-88; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 22 - 338
Target Start/End: Original strand, 5906251 - 5906567
Alignment:
| Q |
22 |
gtgccactaatcacgtggcctctttttgccgagcagagaatgaattcggttttgttgagtgagggactaaaagtgggactgaggccaagagttgatgaaa |
121 |
Q |
| |
|
|||||||||||||| |||||||| ||||| ||||||||||||||| | || || |||||||||| ||||| |||||| |||||||||||||| |||||| |
|
|
| T |
5906251 |
gtgccactaatcacatggcctctgtttgctgagcagagaatgaatgcatttgtgctgagtgagggcctaaaggtgggagtgaggccaagagttaatgaaa |
5906350 |
T |
|
| Q |
122 |
atggcattgtggaaagggtagaggttgctaaggtgatcaagtgtctcatggaaggagaagaaggcgaaaaattgcggagtaatatgaaagaactaaaaga |
221 |
Q |
| |
|
||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||| | || |||||||| | ||||||||| ||| | ||||| |
|
|
| T |
5906351 |
atggcattgtggaaaggatagaggtttctaaggtgatcaagtgtctcatggaaggggaagaatgtgagaaattgcgcaataatatgaaggaattgaaaga |
5906450 |
T |
|
| Q |
222 |
agctgcttctaatgcactcaaagaagatggttcttctacaaagactatttctcaattaacactcaagtggagaaatttggtgcaggagaacaagttttaa |
321 |
Q |
| |
|
||| ||| |||||||||| |||||||||| ||||||| ||||||| ||||||||||| ||| |||||||| |||||||||||| || ||| || ||||| |
|
|
| T |
5906451 |
agcagctactaatgcacttcaagaagatgggtcttctagaaagactgtttctcaattagcacacaagtggaaaaatttggtgcatgaaaactagctttaa |
5906550 |
T |
|
| Q |
322 |
ggaatgattttgataag |
338 |
Q |
| |
|
|||||||||||| |||| |
|
|
| T |
5906551 |
ggaatgattttgttaag |
5906567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 22 - 333
Target Start/End: Original strand, 5902767 - 5903078
Alignment:
| Q |
22 |
gtgccactaatcacgtggcctctttttgccgagcagagaatgaattcggttttgttgagtgagggactaaaagtgggactgaggccaagagttgatgaaa |
121 |
Q |
| |
|
|||||||||||||| |||||| | |||| ||||| ||||||||| | ||| || |||||||||| || |||||||||||||||||||| ||| |||| | |
|
|
| T |
5902767 |
gtgccactaatcacatggcctttgtttggtgagcaaagaatgaatgcagttgtgctgagtgagggccttaaagtgggactgaggccaagggttaatgata |
5902866 |
T |
|
| Q |
122 |
atggcattgtggaaagggtagaggttgctaaggtgatcaagtgtctcatggaaggagaagaaggcgaaaaattgcggagtaatatgaaagaactaaaaga |
221 |
Q |
| |
|
|||||||||| ||||||| || || |||| |||||||| |||||||||||||||||||| | || || ||||| | ||||||||| ||| ||||||| |
|
|
| T |
5902867 |
atggcattgttgaaagggaggaaatttctaaattgatcaagggtctcatggaaggagaagaatgtgagaatttgcgcaataatatgaaggaattaaaaga |
5902966 |
T |
|
| Q |
222 |
agctgcttctaatgcactcaaagaagatggttcttctacaaagactatttctcaattaacactcaagtggagaaatttggtgcaggagaacaagttttaa |
321 |
Q |
| |
|
|||| || ||||||| ||||||||||| || ||||||| |||||| |||||||||||| ||||||||||||||||||||||||| || ||| || ||||| |
|
|
| T |
5902967 |
agcttctactaatgcgctcaaagaagacgggtcttctagaaagaccatttctcaattagcactcaagtggagaaatttggtgcatgaaaactagctttaa |
5903066 |
T |
|
| Q |
322 |
ggaatgattttg |
333 |
Q |
| |
|
|||||||||||| |
|
|
| T |
5903067 |
ggaatgattttg |
5903078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 465
Target Start/End: Original strand, 5903090 - 5903130
Alignment:
| Q |
425 |
tgaagcatgcttataagactttctatttgacagttgagttg |
465 |
Q |
| |
|
||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
5903090 |
tgaagcatgcttataagacattctatttcacagttgagttg |
5903130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 226 - 297
Target Start/End: Complemental strand, 5890674 - 5890603
Alignment:
| Q |
226 |
gcttctaatgcactcaaagaagatggttcttctacaaagactatttctcaattaacactcaagtggagaaat |
297 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| | | ||||||||||| ||||||||||||||||| |
|
|
| T |
5890674 |
gcttctaatgcactcaaagaagatggttcttctacaaacattttttctcaattagcactcaagtggagaaat |
5890603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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