View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1185_high_24 (Length: 265)

Name: NF1185_high_24
Description: NF1185
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1185_high_24
NF1185_high_24
[»] scaffold0124 (2 HSPs)
scaffold0124 (1-251)||(35399-35649)
scaffold0124 (110-211)||(34276-34377)
[»] chr4 (38 HSPs)
chr4 (1-251)||(14911927-14912177)
chr4 (1-211)||(8834741-8834951)
chr4 (1-211)||(15245060-15245271)
chr4 (1-211)||(15307965-15308176)
chr4 (1-211)||(13888488-13888697)
chr4 (110-215)||(15408093-15408198)
chr4 (162-248)||(14035744-14035831)
chr4 (181-248)||(16370686-16370753)
chr4 (6-211)||(18213618-18213823)
chr4 (180-248)||(21188927-21188994)
chr4 (181-248)||(15415844-15415911)
chr4 (191-248)||(15712659-15712715)
chr4 (180-248)||(18230760-18230829)
chr4 (191-248)||(28386275-28386331)
chr4 (162-250)||(14049605-14049696)
chr4 (145-248)||(15991248-15991353)
chr4 (184-248)||(20898714-20898778)
chr4 (180-236)||(56114737-56114793)
chr4 (184-233)||(15447354-15447403)
chr4 (197-248)||(12729809-12729860)
chr4 (180-246)||(16277246-16277312)
chr4 (183-236)||(33661568-33661621)
chr4 (184-248)||(13878804-13878867)
chr4 (184-248)||(13882409-13882472)
chr4 (184-248)||(15076384-15076448)
chr4 (193-233)||(15239794-15239834)
chr4 (162-250)||(30147942-30148033)
chr4 (180-242)||(4171907-4171969)
chr4 (180-242)||(31116226-31116288)
chr4 (184-230)||(32490766-32490812)
chr4 (155-212)||(11848112-11848169)
chr4 (166-212)||(15747556-15747604)
chr4 (184-248)||(9333501-9333564)
chr4 (184-248)||(9387284-9387347)
chr4 (157-209)||(14486661-14486713)
chr4 (184-236)||(15069784-15069836)
chr4 (166-211)||(17143243-17143290)
chr4 (180-235)||(38979930-38979986)
[»] chr3 (32 HSPs)
chr3 (1-209)||(16800873-16801081)
chr3 (162-233)||(2247628-2247701)
chr3 (184-248)||(52212396-52212459)
chr3 (191-248)||(42559-42615)
chr3 (180-233)||(13837159-13837212)
chr3 (191-248)||(16324505-16324561)
chr3 (184-248)||(23392782-23392847)
chr3 (180-233)||(51602503-51602556)
chr3 (180-231)||(11913816-11913867)
chr3 (181-248)||(55291567-55291634)
chr3 (146-248)||(178444-178548)
chr3 (132-211)||(17240513-17240591)
chr3 (186-233)||(17513854-17513901)
chr3 (191-233)||(13437270-13437312)
chr3 (191-248)||(10551354-10551411)
chr3 (183-236)||(11325023-11325076)
chr3 (180-233)||(30123352-30123405)
chr3 (184-248)||(13025534-13025598)
chr3 (181-230)||(15239079-15239128)
chr3 (191-248)||(17547435-17547492)
chr3 (154-211)||(18929243-18929300)
chr3 (155-211)||(9534326-9534382)
chr3 (184-248)||(13029126-13029190)
chr3 (193-233)||(16828259-16828299)
chr3 (155-209)||(20247791-20247845)
chr3 (155-213)||(23370504-23370562)
chr3 (155-209)||(24192955-24193009)
chr3 (155-212)||(16801467-16801523)
chr3 (160-213)||(24933827-24933880)
chr3 (155-211)||(14762758-14762814)
chr3 (184-248)||(30205576-30205639)
chr3 (160-212)||(41455097-41455149)
[»] chr6 (41 HSPs)
chr6 (1-209)||(2286769-2286977)
chr6 (1-211)||(19471335-19471544)
chr6 (1-211)||(25397020-25397228)
chr6 (94-214)||(24512841-24512959)
chr6 (108-209)||(25598596-25598697)
chr6 (180-250)||(1639979-1640049)
chr6 (184-248)||(16132388-16132452)
chr6 (180-233)||(1254852-1254905)
chr6 (191-248)||(31021685-31021741)
chr6 (145-248)||(19443000-19443104)
chr6 (180-225)||(1588763-1588808)
chr6 (191-248)||(13765378-13765434)
chr6 (191-248)||(23225822-23225878)
chr6 (181-237)||(1589755-1589811)
chr6 (180-229)||(34296175-34296224)
chr6 (193-233)||(9621528-9621568)
chr6 (155-213)||(34639985-34640043)
chr6 (155-213)||(34646659-34646717)
chr6 (162-212)||(15816660-15816712)
chr6 (196-233)||(16884590-16884627)
chr6 (191-248)||(21119769-21119826)
chr6 (155-212)||(29614146-29614203)
chr6 (155-211)||(4477856-4477912)
chr6 (155-211)||(23839197-23839253)
chr6 (200-248)||(23956903-23956950)
chr6 (193-233)||(25739355-25739395)
chr6 (157-213)||(31252423-31252479)
chr6 (181-239)||(9184970-9185028)
chr6 (159-213)||(15458492-15458546)
chr6 (159-213)||(15465087-15465141)
chr6 (155-212)||(930095-930152)
chr6 (155-212)||(18800436-18800493)
chr6 (154-211)||(25348485-25348542)
chr6 (184-247)||(5109678-5109742)
chr6 (159-211)||(9187498-9187550)
chr6 (160-212)||(12168366-12168418)
chr6 (160-212)||(19287275-19287327)
chr6 (160-212)||(19785869-19785921)
chr6 (160-212)||(19878459-19878511)
chr6 (184-244)||(23620194-23620253)
chr6 (181-213)||(28288508-28288540)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-236)||(222180-222415)
[»] scaffold0138 (1 HSPs)
scaffold0138 (1-211)||(12142-12352)
[»] chr7 (43 HSPs)
chr7 (1-211)||(46625807-46626017)
chr7 (110-214)||(21230957-21231060)
chr7 (181-248)||(7530152-7530219)
chr7 (184-248)||(48744553-48744617)
chr7 (180-248)||(13256712-13256781)
chr7 (183-248)||(16574266-16574330)
chr7 (183-248)||(16591332-16591396)
chr7 (135-211)||(11382871-11382947)
chr7 (184-248)||(13898495-13898559)
chr7 (180-248)||(15214573-15214641)
chr7 (193-248)||(41285064-41285118)
chr7 (145-248)||(23556330-23556433)
chr7 (145-248)||(23557519-23557622)
chr7 (6-213)||(14567055-14567260)
chr7 (180-225)||(15727353-15727398)
chr7 (95-212)||(148558-148675)
chr7 (184-248)||(8249213-8249277)
chr7 (135-211)||(11389348-11389424)
chr7 (181-237)||(15726350-15726406)
chr7 (135-214)||(20311049-20311128)
chr7 (180-247)||(42042186-42042252)
chr7 (190-232)||(16250201-16250243)
chr7 (181-248)||(39994818-39994886)
chr7 (191-246)||(14188260-14188314)
chr7 (191-246)||(14190858-14190912)
chr7 (186-233)||(29005095-29005142)
chr7 (162-213)||(37726839-37726892)
chr7 (181-230)||(12207673-12207722)
chr7 (155-212)||(14422983-14423040)
chr7 (162-212)||(34958562-34958614)
chr7 (147-212)||(831633-831699)
chr7 (147-212)||(1196813-1196879)
chr7 (155-211)||(16009575-16009631)
chr7 (191-250)||(16107819-16107879)
chr7 (183-230)||(12201068-12201115)
chr7 (159-213)||(31155396-31155450)
chr7 (154-211)||(13679491-13679548)
chr7 (190-242)||(8777243-8777295)
chr7 (160-212)||(12590643-12590695)
chr7 (160-212)||(13007435-13007487)
chr7 (193-233)||(13893480-13893520)
chr7 (157-213)||(14319628-14319684)
chr7 (155-211)||(15168174-15168230)
[»] chr2 (23 HSPs)
chr2 (1-211)||(24661423-24661632)
chr2 (180-248)||(10039024-10039092)
chr2 (181-248)||(24161299-24161366)
chr2 (184-250)||(24272995-24273061)
chr2 (184-248)||(21245705-21245769)
chr2 (182-233)||(23375940-23375991)
chr2 (193-248)||(37380539-37380593)
chr2 (55-212)||(6260171-6260329)
chr2 (162-250)||(19802354-19802445)
chr2 (33-211)||(9242837-9243016)
chr2 (132-211)||(23265119-23265197)
chr2 (132-211)||(23280187-23280265)
chr2 (191-248)||(6477200-6477257)
chr2 (181-248)||(25652244-25652312)
chr2 (184-248)||(26904425-26904489)
chr2 (154-211)||(21908357-21908414)
chr2 (180-233)||(23086421-23086474)
chr2 (155-211)||(6483716-6483772)
chr2 (155-211)||(6487183-6487239)
chr2 (180-247)||(23338358-23338424)
chr2 (184-248)||(22110559-22110622)
chr2 (160-212)||(26583830-26583882)
chr2 (157-213)||(27207718-27207774)
[»] scaffold0335 (2 HSPs)
scaffold0335 (3-247)||(2592-2834)
scaffold0335 (162-250)||(1791-1882)
[»] scaffold0031 (2 HSPs)
scaffold0031 (1-211)||(121748-121958)
scaffold0031 (1-211)||(132625-132834)
[»] scaffold0169 (1 HSPs)
scaffold0169 (6-235)||(6827-7055)
[»] chr8 (41 HSPs)
chr8 (3-247)||(21931546-21931788)
chr8 (1-211)||(19750397-19750605)
chr8 (110-214)||(14056561-14056664)
chr8 (110-214)||(25111931-25112034)
chr8 (162-250)||(21860494-21860585)
chr8 (191-248)||(8413713-8413769)
chr8 (191-248)||(11775745-11775801)
chr8 (191-248)||(18023441-18023497)
chr8 (184-248)||(20387509-20387572)
chr8 (180-248)||(22433579-22433646)
chr8 (180-232)||(42559434-42559486)
chr8 (162-237)||(15635069-15635146)
chr8 (180-246)||(20494315-20494381)
chr8 (3-120)||(21840250-21840366)
chr8 (181-248)||(22617655-22617722)
chr8 (132-211)||(23482053-23482131)
chr8 (191-248)||(19882979-19883035)
chr8 (186-250)||(22815558-22815622)
chr8 (193-233)||(34951458-34951498)
chr8 (133-211)||(18614250-18614327)
chr8 (190-248)||(25657478-25657535)
chr8 (155-213)||(44477621-44477679)
chr8 (155-213)||(44492779-44492837)
chr8 (110-212)||(27940851-27940953)
chr8 (184-248)||(15003066-15003129)
chr8 (193-233)||(22005055-22005095)
chr8 (184-247)||(24980136-24980200)
chr8 (204-248)||(36601395-36601438)
chr8 (162-211)||(38184696-38184747)
chr8 (193-233)||(44522157-44522197)
chr8 (180-242)||(9404867-9404929)
chr8 (199-233)||(11250761-11250795)
chr8 (180-209)||(364884-364913)
chr8 (181-214)||(21325764-21325797)
chr8 (180-247)||(28854836-28854902)
chr8 (154-211)||(39364918-39364975)
chr8 (193-233)||(21330858-21330898)
chr8 (193-233)||(21966679-21966719)
chr8 (193-233)||(21979445-21979485)
chr8 (193-233)||(21999416-21999456)
chr8 (190-242)||(45134078-45134130)
[»] scaffold0600 (1 HSPs)
scaffold0600 (3-247)||(582-824)
[»] scaffold0096 (1 HSPs)
scaffold0096 (1-210)||(39508-39717)
[»] scaffold0004 (3 HSPs)
scaffold0004 (1-101)||(128766-128866)
scaffold0004 (132-211)||(116873-116951)
scaffold0004 (184-248)||(60448-60511)
[»] scaffold0139 (1 HSPs)
scaffold0139 (108-211)||(14997-15099)
[»] scaffold0107 (1 HSPs)
scaffold0107 (110-214)||(40529-40633)
[»] scaffold0019 (2 HSPs)
scaffold0019 (110-214)||(135427-135531)
scaffold0019 (33-211)||(34316-34495)
[»] scaffold0053 (1 HSPs)
scaffold0053 (6-176)||(81246-81415)
[»] scaffold0028 (2 HSPs)
scaffold0028 (97-211)||(2002-2115)
scaffold0028 (107-211)||(69698-69801)
[»] chr1 (22 HSPs)
chr1 (129-211)||(20805294-20805376)
chr1 (180-248)||(21180244-21180311)
chr1 (184-251)||(18271345-18271412)
chr1 (134-211)||(11158070-11158148)
chr1 (184-251)||(18275999-18276066)
chr1 (110-211)||(19663517-19663618)
chr1 (162-250)||(13227890-13227981)
chr1 (55-211)||(16372852-16373009)
chr1 (184-248)||(20902157-20902221)
chr1 (193-248)||(634968-635022)
chr1 (186-233)||(7791537-7791584)
chr1 (183-248)||(8686049-8686114)
chr1 (183-236)||(28203731-28203784)
chr1 (131-211)||(18712775-18712854)
chr1 (184-236)||(21660394-21660446)
chr1 (181-248)||(21526747-21526814)
chr1 (132-211)||(32651549-32651627)
chr1 (191-248)||(13527678-13527735)
chr1 (155-211)||(20437024-20437080)
chr1 (180-247)||(297383-297449)
chr1 (184-236)||(24476353-24476405)
chr1 (160-212)||(41112038-41112090)
[»] scaffold0094 (1 HSPs)
scaffold0094 (6-211)||(52100-52304)
[»] scaffold0815 (1 HSPs)
scaffold0815 (134-211)||(1428-1504)
[»] scaffold1276 (1 HSPs)
scaffold1276 (180-248)||(1159-1226)
[»] scaffold0635 (1 HSPs)
scaffold0635 (180-248)||(7978-8046)
[»] scaffold0607 (1 HSPs)
scaffold0607 (162-250)||(3793-3884)
[»] scaffold0235 (1 HSPs)
scaffold0235 (110-210)||(22594-22693)
[»] chr5 (26 HSPs)
chr5 (95-211)||(22337461-22337578)
chr5 (135-214)||(22438745-22438824)
chr5 (162-247)||(17813483-17813571)
chr5 (191-248)||(33472528-33472584)
chr5 (180-233)||(36461064-36461117)
chr5 (132-211)||(18407944-18408022)
chr5 (95-211)||(22340999-22341116)
chr5 (180-233)||(21980045-21980098)
chr5 (184-233)||(22356882-22356931)
chr5 (132-211)||(23111200-23111278)
chr5 (184-246)||(21663109-21663170)
chr5 (183-248)||(26707396-26707462)
chr5 (183-248)||(26977130-26977196)
chr5 (183-248)||(21553354-21553418)
chr5 (180-247)||(24276462-24276530)
chr5 (180-247)||(24385683-24385751)
chr5 (155-212)||(38144536-38144593)
chr5 (33-212)||(42961444-42961622)
chr5 (181-248)||(7786200-7786268)
chr5 (155-211)||(19512385-19512441)
chr5 (155-211)||(28370055-28370111)
chr5 (180-211)||(6766779-6766810)
chr5 (180-242)||(43122047-43122109)
chr5 (180-242)||(43125580-43125642)
chr5 (184-247)||(17021877-17021941)
chr5 (160-212)||(23528634-23528686)
[»] scaffold0388 (2 HSPs)
scaffold0388 (180-250)||(14946-15015)
scaffold0388 (184-250)||(15067-15132)
[»] scaffold0034 (1 HSPs)
scaffold0034 (183-248)||(33893-33958)
[»] scaffold0001 (2 HSPs)
scaffold0001 (191-248)||(176824-176880)
scaffold0001 (193-233)||(152089-152129)
[»] scaffold0064 (1 HSPs)
scaffold0064 (162-250)||(68988-69079)
[»] scaffold0016 (2 HSPs)
scaffold0016 (181-248)||(182010-182078)
scaffold0016 (193-233)||(172087-172127)
[»] scaffold0599 (1 HSPs)
scaffold0599 (180-231)||(1092-1143)
[»] scaffold0481 (1 HSPs)
scaffold0481 (181-251)||(634-705)
[»] scaffold0037 (1 HSPs)
scaffold0037 (6-211)||(71343-71548)
[»] scaffold0232 (1 HSPs)
scaffold0232 (1-62)||(18578-18639)
[»] scaffold0008 (1 HSPs)
scaffold0008 (162-247)||(11372-11460)
[»] scaffold0447 (2 HSPs)
scaffold0447 (184-248)||(7873-7937)
scaffold0447 (184-248)||(12487-12551)
[»] scaffold0383 (1 HSPs)
scaffold0383 (184-248)||(10482-10546)
[»] scaffold0334 (1 HSPs)
scaffold0334 (182-246)||(2140-2203)
[»] scaffold0310 (1 HSPs)
scaffold0310 (138-214)||(17625-17701)
[»] scaffold0117 (2 HSPs)
scaffold0117 (162-250)||(21848-21939)
scaffold0117 (180-250)||(34521-34592)
[»] scaffold0672 (1 HSPs)
scaffold0672 (184-250)||(7430-7497)
[»] scaffold0461 (1 HSPs)
scaffold0461 (132-211)||(8-86)
[»] scaffold0337 (1 HSPs)
scaffold0337 (95-211)||(8770-8887)
[»] scaffold0222 (1 HSPs)
scaffold0222 (132-211)||(16797-16875)
[»] scaffold0146 (1 HSPs)
scaffold0146 (132-211)||(13609-13687)
[»] scaffold0090 (2 HSPs)
scaffold0090 (181-248)||(31411-31478)
scaffold0090 (155-212)||(18168-18225)
[»] scaffold0071 (1 HSPs)
scaffold0071 (145-221)||(51985-52062)
[»] scaffold0962 (1 HSPs)
scaffold0962 (184-246)||(582-643)
[»] scaffold0413 (1 HSPs)
scaffold0413 (162-221)||(11659-11720)
[»] scaffold0181 (1 HSPs)
scaffold0181 (184-246)||(25487-25548)
[»] scaffold0132 (2 HSPs)
scaffold0132 (194-248)||(3641-3694)
scaffold0132 (194-246)||(11603-11654)
[»] scaffold0696 (1 HSPs)
scaffold0696 (183-248)||(3354-3419)
[»] scaffold0042 (2 HSPs)
scaffold0042 (184-248)||(52228-52292)
scaffold0042 (162-250)||(67704-67790)
[»] scaffold0080 (2 HSPs)
scaffold0080 (186-233)||(30007-30054)
scaffold0080 (186-233)||(35472-35519)
[»] scaffold0020 (1 HSPs)
scaffold0020 (132-211)||(101928-102006)
[»] scaffold0298 (1 HSPs)
scaffold0298 (162-236)||(602-678)
[»] scaffold0026 (2 HSPs)
scaffold0026 (155-213)||(111684-111742)
scaffold0026 (155-212)||(11850-11907)
[»] scaffold0924 (1 HSPs)
scaffold0924 (155-212)||(750-807)
[»] scaffold0247 (1 HSPs)
scaffold0247 (155-212)||(11340-11397)
[»] scaffold0175 (1 HSPs)
scaffold0175 (184-233)||(18873-18922)
[»] scaffold0154 (1 HSPs)
scaffold0154 (155-212)||(30856-30913)
[»] scaffold1555 (1 HSPs)
scaffold1555 (204-248)||(208-251)
[»] scaffold0609 (1 HSPs)
scaffold0609 (157-213)||(5856-5912)
[»] scaffold0500 (1 HSPs)
scaffold0500 (184-248)||(10675-10738)
[»] scaffold0480 (1 HSPs)
scaffold0480 (181-237)||(1490-1545)
[»] scaffold0457 (1 HSPs)
scaffold0457 (193-233)||(10876-10916)
[»] scaffold0338 (1 HSPs)
scaffold0338 (162-211)||(2845-2896)
[»] scaffold0301 (2 HSPs)
scaffold0301 (193-233)||(11300-11340)
scaffold0301 (193-233)||(15700-15740)
[»] scaffold0023 (1 HSPs)
scaffold0023 (180-212)||(106021-106053)
[»] scaffold0014 (1 HSPs)
scaffold0014 (181-236)||(189750-189805)
[»] scaffold0553 (1 HSPs)
scaffold0553 (155-213)||(10194-10252)
[»] scaffold0544 (1 HSPs)
scaffold0544 (155-213)||(1524-1582)
[»] scaffold0371 (1 HSPs)
scaffold0371 (180-214)||(8544-8578)
[»] scaffold0249 (1 HSPs)
scaffold0249 (159-213)||(13893-13947)
[»] scaffold0141 (1 HSPs)
scaffold0141 (180-242)||(34031-34093)
[»] scaffold0098 (2 HSPs)
scaffold0098 (199-233)||(25185-25219)
scaffold0098 (199-233)||(36055-36089)
[»] scaffold0049 (1 HSPs)
scaffold0049 (180-242)||(80719-80781)
[»] scaffold0025 (1 HSPs)
scaffold0025 (155-209)||(14398-14452)
[»] scaffold0485 (1 HSPs)
scaffold0485 (181-214)||(3768-3801)
[»] scaffold0456 (2 HSPs)
scaffold0456 (155-212)||(930-987)
scaffold0456 (155-212)||(8075-8132)
[»] scaffold0317 (1 HSPs)
scaffold0317 (154-211)||(1384-1441)
[»] scaffold0029 (1 HSPs)
scaffold0029 (159-212)||(111885-111938)
[»] scaffold0720 (1 HSPs)
scaffold0720 (157-213)||(3401-3457)
[»] scaffold0180 (1 HSPs)
scaffold0180 (162-211)||(11630-11681)
[»] scaffold0015 (1 HSPs)
scaffold0015 (193-233)||(209894-209934)
[»] scaffold0011 (1 HSPs)
scaffold0011 (181-233)||(20779-20831)


Alignment Details
Target: scaffold0124 (Bit Score: 239; Significance: 1e-132; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 35649 - 35399
Alignment:
Q  1 ttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgtctcctaaacttttcaactcaaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  35649 ttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgtctcctacacttttcaactcaaaat 35550  T
Q  101 cagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  35549 cagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatacattacaatcattgagagttagtctta 35450  T
Q  201 cccttaccttagatcgatgaacaaagctctacaaaaatctgattctcctcc 251  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35449 cccttaccttagatcgatgaacaaagctctacaaaaatctgattctcctcc 35399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 110 - 211
Target Start/End: Complemental strand, 34377 - 34276
Alignment:
Q  110 aaccctaattccccaattcctatt-tcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacc 208  Q
    ||||||||||||| ||||  |||| ||||||||||||||||||||| |||||||||||| ||||||| ||  || || ||||| ||||||||||||||||    
T  34377 aaccctaattccc-aatttttattctcaagaacaattcatgttaaaacaattttcagaaattatatactatgattatcgagagatagtctcacccttacc 34279  T
Q  209 tta 211  Q
    |||    
T  34278 tta 34276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 14911927 - 14912177
Alignment:
Q  1 ttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgtctcctaaacttttcaactcaaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  14911927 ttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgtcacctacacttttcaactcaaaat 14912026  T
Q  101 cagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctca 200  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  14912027 ctgtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctaa 14912126  T
Q  201 cccttaccttagatcgatgaacaaagctctacaaaaatctgattctcctcc 251  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14912127 cccttaccttagatcgatgaacaaagctctacaaaaatctgattctcctcc 14912177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 8834741 - 8834951
Alignment:
Q  1 ttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgtctcctaaacttttcaact-caaaa 99  Q
    |||||||||| ||||||| ||||||||| | ||||| ||| ||||||||||||||||||||||||||||||||||  ||||| ||||||   || ||| |    
T  8834741 ttcccaattccgattacatcaatgttacaacatcctaaaatcgatctgaacatgattctaagcataattaacatgattcctacactttttcccttcaata 8834840  T
Q  100 tcagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctc 199  Q
     ||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||| |||    
T  8834841 acagtaatagaaccctaattctc-aattcctatttcaagaacaattcatgttaaatcaattttcagaaattatatattatgatcattgagagttagcctc 8834939  T
Q  200 acccttacctta 211  Q
    ||||||||||||    
T  8834940 acccttacctta 8834951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 15245060 - 15245271
Alignment:
Q  1 ttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgtctcctaaacttttcaact--caaa 98  Q
    ||||||||||||||||||||||||||||   ||||| ||| ||||||||| | | ||||||||||||| ||||||  ||||| ||||||   ||  ||||    
T  15245060 ttcccaattctgattacaacaatgttacagcatcctaaaatcgatctgaagaggtttctaagcataatcaacatgattcctacactttttcccttccaaa 15245159  T
Q  99 atcagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtct 198  Q
    ||||||| ||||||||||||||   ||||||| | |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||    
T  15245160 atcagtaatagaaccctaattcat-aattcctttctcaagaacaattcatgttaaatcaattttcagaaattatatattacgatcattgagagttagcct 15245258  T
Q  199 cacccttacctta 211  Q
    |||||||||||||    
T  15245259 cacccttacctta 15245271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 15307965 - 15308176
Alignment:
Q  1 ttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgtctcctaaacttttcaact--caaa 98  Q
    ||||||||||||||||||||||||||||   ||||| ||| ||||||||||| | ||||||||||||| ||||||  ||||| ||||||   ||  ||||    
T  15307965 ttcccaattctgattacaacaatgttacagcatcctaaaatcgatctgaacaggtttctaagcataatcaacatgattcctacactttttcccttccaaa 15308064  T
Q  99 atcagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtct 198  Q
    ||||||| ||||||||||||||   ||||||| | |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||    
T  15308065 atcagtaatagaaccctaattcat-aattcctttctcaagaacaattcatgttaaatcaattttcagaaattatatattacgatcattgagagttagcct 15308163  T
Q  199 cacccttacctta 211  Q
    |||||||| ||||    
T  15308164 cacccttaactta 15308176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 13888488 - 13888697
Alignment:
Q  1 ttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgtctcctaaacttttcaact-caaaa 99  Q
    ||||||||||||||||||||||||||||   ||||| ||| ||||| ||||| | |||| || ||||||||||||  ||||| ||||||   || |||||    
T  13888488 ttcccaattctgattacaacaatgttacagcatcctaaaatcgatcagaacaggtttctgagtataattaacatgattcctacactttttcccttcaaaa 13888587  T
Q  100 tcagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctc 199  Q
    ||||||  ||||||||||||| | ||||||||| |||| | ||||||||||||||||||||||||||| ||||| ||||  ||||||||||||||| |||    
T  13888588 tcagtaacagaaccctaattcac-aattcctatctcaa-agcaattcatgttaaatcaattttcagaaattatacattatgatcattgagagttagcctc 13888685  T
Q  200 acccttacctta 211  Q
    ||||||||||||    
T  13888686 acccttacctta 13888697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 15408093 - 15408198
Alignment:
Q  110 aaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 209  Q
    |||||||||| |||||||   |||||||||||||||||||||||| |||||||||||| ||||||| ||  || |||||||| |||||||||||||||||    
T  15408093 aaccctaatttcccaattttcatttcaagaacaattcatgttaaaacaattttcagaaattatatactatgattattgagagatagtctcacccttacct 15408192  T
Q  210 tagatc 215  Q
    ||||||    
T  15408193 tagatc 15408198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 14035744 - 14035831
Alignment:
Q  162 tcagaagttatatatt--acaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||||| |  | ||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||    
T  14035744 tcagaagttatataatctataatcattgagagttagtctcacccttaccttagatcgatgaacaaagttctac-agaatctgattctcc 14035831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 16370753 - 16370686
Alignment:
Q  181 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    ||||||||||||||||||||||||||||||  || |||||||||||||||||||||||| ||||||||    
T  16370753 atcattgagagttagtctcacccttaccttgaattgatgaacaaagctctacaaaaatcagattctcc 16370686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 211
Target Start/End: Original strand, 18213618 - 18213823
Alignment:
Q  6 aattctgattacaacaatgttactaaatcctgaaaacgatctgaacatga-ttctaagcataattaacatgtctcctaaa-cttttcaactcaaaatcag 103  Q
    ||||| |||||||||||  ||| ||| |||| ||| ||||||||| |||| ||||||||||||||||||||  |||| |  ||||||  | |||||||||    
T  18213618 aattcggattacaacaacatta-taattcctaaaatcgatctgaatatgaattctaagcataattaacatgaatccttactcttttcttc-caaaatcag 18213715  T
Q  104 tattagaaccctaattccccaattcctattt--caagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcac 201  Q
    ||| ||||||||||||||| ||||| |||||  ||||||||||||   | ||| |||||||||||| | |||||||| |||||||||  ||||| |||||    
T  18213716 tat-agaaccctaattccc-aattcttatttttcaagaacaattctaatcaaaacaattttcagaaatcatatattataatcattgaaggttagcctcac 18213813  T
Q  202 ccttacctta 211  Q
    ||||||||||    
T  18213814 ccttacctta 18213823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 180 - 248
Target Start/End: Complemental strand, 21188994 - 21188927
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21188994 aatcattgaaagttaacctcacccttaccttagatcgatgaacaaagctctac-aaaatctgattctcc 21188927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 15415911 - 15415844
Alignment:
Q  181 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    ||||||||||||||||||||||||||||||  || ||||||||||||||| |||||||| ||||||||    
T  15415911 atcattgagagttagtctcacccttaccttgaattgatgaacaaagctctccaaaaatcagattctcc 15415844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 15712715 - 15712659
Alignment:
Q  191 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  15712715 gttagtctcacccttaccttagatcgatgaacaaagctctac-agaatctgattctcc 15712659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 248
Target Start/End: Original strand, 18230760 - 18230829
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctcta-caaaaatctgattctcc 248  Q
    |||||||||||||||| |||||||||||||||||| |||||| ||| ||||| |||||||||||||||||    
T  18230760 aatcattgagagttagcctcacccttaccttagattgatgaataaaactctaccaaaaatctgattctcc 18230829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 28386275 - 28386331
Alignment:
Q  191 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  28386275 gttagtctcacccttaccttagatcgatgaacaaagctctac-agaatctgattctcc 28386331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 250
Target Start/End: Original strand, 14049605 - 14049696
Alignment:
Q  162 tcagaagttatatatt--acaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctcctc 250  Q
    |||||||||||||| |  | ||| |||||||||| |||||||||||||||| ||| || ||||||| ||||||| |||||||||||||||||    
T  14049605 tcagaagttatataatctataattattgagagttggtctcacccttacctttgattgaagaacaaaactctacagaaaatctgattctcctc 14049696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 248
Target Start/End: Original strand, 15991248 - 15991353
Alignment:
Q  145 tcatgttaaatcaattttcagaagttatata---ttacaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctg 241  Q
    ||||||||||||||||| ||||| ||| |||   ||| ||| ||||| |||||| |||||||||||| |  || |||||||||||||||||||||||| |    
T  15991248 tcatgttaaatcaattt-cagaatttacatacacttataattattgaaagttagcctcacccttaccatgaattgatgaacaaagctctacaaaaatcag 15991346  T
Q  242 attctcc 248  Q
    |||||||    
T  15991347 attctcc 15991353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 20898778 - 20898714
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||| ||||||||||||||  || |||||||||| ||||||||||||| ||||||||    
T  20898778 attgagagttagcctcacccttaccttgaattgatgaacaaatctctacaaaaatcagattctcc 20898714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 56114793 - 56114737
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaa 236  Q
    |||||||||||||||| |||||||||||||||||| ||||||||| ||| |||||||    
T  56114793 aatcattgagagttagcctcacccttaccttagattgatgaacaacgctttacaaaa 56114737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 15447403 - 15447354
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    ||||| |||||| ||||| |||||||||||||||||||||||||||||||    
T  15447403 attgaaagttagcctcactcttaccttagatcgatgaacaaagctctaca 15447354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 248
Target Start/End: Complemental strand, 12729860 - 12729809
Alignment:
Q  197 ctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    ||||||||||||||  || |||||||||||||||||||||||| ||||||||    
T  12729860 ctcacccttaccttgaattgatgaacaaagctctacaaaaatcagattctcc 12729809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 16277312 - 16277246
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattct 246  Q
    ||||||||  |||||| ||||||||||||||  || |||||||||| ||||||||||||| ||||||    
T  16277312 aatcattgcaagttagcctcacccttaccttgaattgatgaacaaatctctacaaaaatcagattct 16277246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 33661621 - 33661568
Alignment:
Q  183 cattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaa 236  Q
    ||||||||||||| ||||||||||||||  || ||||||||||||| |||||||    
T  33661621 cattgagagttagcctcacccttaccttgaattgatgaacaaagctgtacaaaa 33661568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 13878804 - 13878867
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||| ||||||||||||||  || ||||||| ||||||||| |||||| ||||||||    
T  13878804 attgagagttagcctcacccttaccttgaattgatgaac-aagctctacgaaaatcagattctcc 13878867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 13882409 - 13882472
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||| ||||||||||||||  || ||||||| ||||||||| |||||| ||||||||    
T  13882409 attgagagttagcctcacccttaccttgaattgatgaac-aagctctacgaaaatcagattctcc 13882472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 15076384 - 15076448
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||| |||||||||||||||||||  | |||||||||| |||| |||||||| || |||||    
T  15076384 attgagagatagtctcacccttaccttaatttgatgaacaaaactctccaaaaatcagaatctcc 15076448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 15239834 - 15239794
Alignment:
Q  193 tagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    |||||||||||||||||||||| || |||||||||||||||    
T  15239834 tagtctcacccttaccttagattgaagaacaaagctctaca 15239794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 250
Target Start/End: Original strand, 30147942 - 30148033
Alignment:
Q  162 tcagaagttatatatt--acaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctcctc 250  Q
    |||||||||||||| |  | ||| |||||||||||||||||||||||| || ||| || ||| ||| |||| || |||||||||||||||||    
T  30147942 tcagaagttatataatctataattattgagagttagtctcacccttacttttgattgaagaataaaactcttcagaaaatctgattctcctc 30148033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 4171907 - 4171969
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctga 242  Q
    ||||||||  |||||| |||||||||||||||||| |||||| || |||  ||||||||||||    
T  4171907 aatcattgcaagttagcctcacccttaccttagattgatgaataatgcttaacaaaaatctga 4171969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 31116288 - 31116226
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctga 242  Q
    ||||||||  |||||| |||||||||||||||||| |||||| || |||  ||||||||||||    
T  31116288 aatcattgcaagttagcctcacccttaccttagattgatgaataatgcttaacaaaaatctga 31116226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 32490766 - 32490812
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctct 230  Q
    |||||||||||||||||||||||||||   | |||||||||||||||    
T  32490766 attgagagttagtctcacccttaccttgatttgatgaacaaagctct 32490812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 11848112 - 11848169
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 212  Q
    ||||||||||| | ||||| ||||  || |||||||| ||||||||||||||||||||    
T  11848112 tcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 11848169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 15747604 - 15747556
Alignment:
Q  166 aagttatata--ttacaatcattgagagttagtctcacccttaccttag 212  Q
    ||||||||||  ||| ||| |||||||||||||||||||||||||||||    
T  15747604 aagttatataatttataattattgagagttagtctcacccttaccttag 15747556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 9333564 - 9333501
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||| ||||||||||||||  || || |||| ||||||||| |||||| ||||||||    
T  9333564 attgagagttagcctcacccttaccttgaattgacgaac-aagctctacgaaaatcagattctcc 9333501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 9387347 - 9387284
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||| ||||||||||||||  || || |||| ||||||||| |||||| ||||||||    
T  9387347 attgagagttagcctcacccttaccttgaattgacgaac-aagctctacgaaaatcagattctcc 9387284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 209
Target Start/End: Original strand, 14486661 - 14486713
Alignment:
Q  157 aattttcagaagttatatattacaatcattgagagttagtctcacccttacct 209  Q
    ||||||||||| ||||||||||  ||||||||  | |||||||||||||||||    
T  14486661 aattttcagaaattatatattatgatcattgaaggatagtctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 15069784 - 15069836
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaa 236  Q
    |||||||| |||||||||||||||||||  | |||||||||| |||| |||||    
T  15069784 attgagagatagtctcacccttaccttaatttgatgaacaaaactctccaaaa 15069836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 17143243 - 17143290
Alignment:
Q  166 aagttatata--ttacaatcattgagagttagtctcacccttacctta 211  Q
    ||||||||||  ||| ||| ||||||||||||||||||||||||||||    
T  17143243 aagttatataatttataattattgagagttagtctcacccttacctta 17143290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 38979986 - 38979930
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatc-gatgaacaaagctctacaaa 235  Q
    ||||||||  |||||| |||||||||||||||  || ||||||||||||||||||||    
T  38979986 aatcattgcaagttagcctcacccttaccttaattcagatgaacaaagctctacaaa 38979930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 205; Significance: 1e-112; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 16800873 - 16801081
Alignment:
Q  1 ttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgtctcctaaacttttcaactcaaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16800873 ttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgtctcctacacttttcaactcaaaat 16800972  T
Q  101 cagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16800973 cagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctca 16801072  T
Q  201 cccttacct 209  Q
    |||||||||    
T  16801073 cccttacct 16801081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 233
Target Start/End: Complemental strand, 2247701 - 2247628
Alignment:
Q  162 tcagaagttatata--ttacaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    ||||||||||||||  ||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2247701 tcagaagttatataatttataattattgagagttagtctcacccttaccttagattgatgaacaaagctctaca 2247628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 52212459 - 52212396
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  52212459 attgagagttagcctcacccttaccttagattgatgaacaaagctctac-aaaatctgattctcc 52212396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 42559 - 42615
Alignment:
Q  191 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  42559 gttagtctcacccttaccttagatcgatgaacaaagctctac-agaatctgattctcc 42615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 13837159 - 13837212
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  13837159 aatcattgagagttagtctcacccttaccttagattgatgaacaaaactctaca 13837212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 16324561 - 16324505
Alignment:
Q  191 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  16324561 gttagtctcacccttaccttagatcgatgaacaaagctctac-agaatctgattctcc 16324505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 23392847 - 23392782
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctcta-caaaaatctgattctcc 248  Q
    ||||||||||||||||||||||||||||||| |||||| ||| ||||| |||||||||||||||||    
T  23392847 attgagagttagtctcacccttaccttagattgatgaataaaactctaccaaaaatctgattctcc 23392782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 51602556 - 51602503
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  51602556 aatcattgagagttagcctcacccttaccttagattgatgaacaaagctctaca 51602503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 11913816 - 11913867
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctcta 231  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  11913816 aatcattgagagttagcctcacccttaccttagattgatgaacaaagctcta 11913867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 55291634 - 55291567
Alignment:
Q  181 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    ||||||||||| ||||||||||||||||||  || |||||||||| ||||||||||||| ||||||||    
T  55291634 atcattgagagatagtctcacccttaccttgaattgatgaacaaatctctacaaaaatcagattctcc 55291567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 248
Target Start/End: Complemental strand, 178548 - 178444
Alignment:
Q  146 catgttaaatcaattttcagaagttatata---ttacaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctga 242  Q
    |||||||||||||||| ||||| ||| |||   ||| ||| ||||| |||||| ||||||||||||||  |  |||||||||||||||||||||||| ||    
T  178548 catgttaaatcaattt-cagaatttacatacacttataattattgaaagttagcctcacccttaccttgaactgatgaacaaagctctacaaaaatcaga 178450  T
Q  243 ttctcc 248  Q
    ||||||    
T  178449 ttctcc 178444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 17240591 - 17240513
Alignment:
Q  132 tttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    ||||||||||||||||  ||| |||||||||||||| |||| |||||  || |||||||| |||||||||||||||||||    
T  17240591 tttcaagaacaattcaa-ttagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 17513854 - 17513901
Alignment:
Q  186 tgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  17513854 tgagtgttagtctcacccttaccttagattgatgaacaaagctctaca 17513901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 13437270 - 13437312
Alignment:
Q  191 gttagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  13437270 gttagtctcacccttaccttagattgatgaacaaagctctaca 13437312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 10551354 - 10551411
Alignment:
Q  191 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||| |||||||||||||||  || |||||||||||||||||||||||| ||||||||    
T  10551354 gttaatctcacccttaccttgaattgatgaacaaagctctacaaaaatcagattctcc 10551411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 11325076 - 11325023
Alignment:
Q  183 cattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaa 236  Q
    ||||||||||||||||||||||||||||   | |||||||||||||||||||||    
T  11325076 cattgagagttagtctcacccttaccttgatttgatgaacaaagctctacaaaa 11325023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 30123405 - 30123352
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    |||||||||||||||| |||| ||||||||||||| |||||||||| |||||||    
T  30123405 aatcattgagagttagcctcaaccttaccttagattgatgaacaaaactctaca 30123352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 13025598 - 13025534
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    ||||| |||||| ||||||||||| ||  || |||||||||||||||||||||||| ||||||||    
T  13025598 attgaaagttagcctcacccttactttgaattgatgaacaaagctctacaaaaatcagattctcc 13025534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 15239079 - 15239128
Alignment:
Q  181 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctct 230  Q
    ||||||||||||||||||||||||||||||   | |||||||||||||||    
T  15239079 atcattgagagttagtctcacccttaccttgatttgatgaacaaagctct 15239128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 17547492 - 17547435
Alignment:
Q  191 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    ||||| |||||||| |||||  || |||||||||||||||||||||||| ||||||||    
T  17547492 gttagcctcaccctaaccttgaattgatgaacaaagctctacaaaaatcagattctcc 17547435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 18929243 - 18929300
Alignment:
Q  154 atcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    |||||||||||||| |||||||| |  || |||||||| |||||||||||||||||||    
T  18929243 atcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 9534326 - 9534382
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||||    
T  9534326 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 13029190 - 13029126
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    ||||| |||||| ||||||||||| ||  || ||||||||| |||||||||||||| ||||||||    
T  13029190 attgaaagttagcctcacccttactttgaattgatgaacaacgctctacaaaaatcagattctcc 13029126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 16828299 - 16828259
Alignment:
Q  193 tagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  16828299 tagtcccacccttaccttagattgatgaacaaagctctaca 16828259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 20247845 - 20247791
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 209  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||    
T  20247845 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 23370562 - 23370504
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 213  Q
    ||||||||||||| ||||| ||||  || |||||||| ||||| |||||||||||||||    
T  23370562 tcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttaga 23370504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 209
Target Start/End: Original strand, 24192955 - 24193009
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 209  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||    
T  24192955 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 16801523 - 16801467
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 212  Q
    ||||||||||||| |||||||| |  || |||||||| ||||||||||||||||||||    
T  16801523 tcaattttcagaaattatatat-atgattattgagagatagtctcacccttaccttag 16801467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 24933880 - 24933827
Alignment:
Q  160 tttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 213  Q
    |||||||| ||||| ||||  || |||||||| |||||||||||||||||||||    
T  24933880 tttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 24933827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 14762814 - 14762758
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    ||||||||||||| ||||| ||||  || || ||||| |||||||||||||||||||    
T  14762814 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 14762758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 30205639 - 30205576
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||||||||||||||||||  || || |||| ||||||||| |||||| | ||||||    
T  30205639 attgagagttagtctcacccttaccttgaattgacgaac-aagctctacgaaaatcagtttctcc 30205576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 41455149 - 41455097
Alignment:
Q  160 tttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 212  Q
    |||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  41455149 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 41455097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 197; Significance: 1e-107; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 2286977 - 2286769
Alignment:
Q  1 ttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgtctcctaaacttttcaactcaaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2286977 ttcccaattctgattacaacaatgttactaaatcctgaaaatgatctaaacatgattctaagcataattaacatgtctcctacacttttcaactcaaaat 2286878  T
Q  101 cagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2286877 cagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctca 2286778  T
Q  201 cccttacct 209  Q
    |||||||||    
T  2286777 cccttacct 2286769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 19471544 - 19471335
Alignment:
Q  1 ttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgtctcctaaacttttcaactcaaaat 100  Q
    |||||||||||||||||| |||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  19471544 ttcccaattctgattacagcaatgttacagaatcctaaaaacgatctgaacatgattctaagcataattaacatgtctcctacacttttcaactcaaaat 19471445  T
Q  101 cagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctca 200  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||| ||||||||||  ||||| ||||| ||| ||||    
T  19471444 cagtattagaaccctaattccccaattcttatttcaagaac-attcatgttaaatcaatttccagaaattatatattatgatcatcgagaggtagcctca 19471346  T
Q  201 cccttacctta 211  Q
    |||||||||||    
T  19471345 cccttacctta 19471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 25397020 - 25397228
Alignment:
Q  1 ttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgtctcctaaacttttcaactcaaaat 100  Q
    ||||||||| ||||||||||||||||||  |||||| ||||||| |||||||| |||||||||||||||||| ||||||||| |||||||   |||||||    
T  25397020 ttcccaattatgattacaacaatgttacagaatcctaaaaacgacctgaacattattctaagcataattaacttgtctcctacacttttcctttcaaaat 25397119  T
Q  101 cagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctca 200  Q
    ||||| ||||||||||||| | |||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||  ||||| ||||||||| ||||    
T  25397120 cagtaatagaaccctaatt-cacaattcctatctcaagaacaatt-atgttaaatcaattttcagaaattatatattatgatcatcgagagttagcctca 25397217  T
Q  201 cccttacctta 211  Q
    |||||||||||    
T  25397218 cccttacctta 25397228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 94 - 214
Target Start/End: Complemental strand, 24512959 - 24512841
Alignment:
Q  94 tcaaaatcagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagtt 193  Q
    ||||||||||||| ||||||||||||||| ||||  ||| ||||||||||||||||||||| |||||||||||| ||||||| ||  || |||||||| |    
T  24512959 tcaaaatcagtat-agaaccctaattccc-aatttttatctcaagaacaattcatgttaaaacaattttcagaaattatatactatgattattgagagat 24512862  T
Q  194 agtctcacccttaccttagat 214  Q
    ||||||||||| |||||||||    
T  24512861 agtctcaccctcaccttagat 24512841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 108 - 209
Target Start/End: Original strand, 25598596 - 25598697
Alignment:
Q  108 agaaccctaattccccaattcctattt-caagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcaccctta 206  Q
    ||||||||||||||| |||  |||||| ||||||||| |||||||||||||||||||||||  |||||||||  ||||||||||||||||||||||||||    
T  25598596 agaaccctaattccc-aatctctattttcaagaacaactcatgttaaatcaattttcagaaaatatatattatgatcattgagagttagtctcaccctta 25598694  T
Q  207 cct 209  Q
    |||    
T  25598695 cct 25598697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 180 - 250
Target Start/End: Original strand, 1639979 - 1640049
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcctc 250  Q
    |||||||||||||||| |||||||||||||||||||||||||  || |||||| |||||||||||||||||    
T  1639979 aatcattgagagttagcctcacccttaccttagatcgatgaatcaaactctaccaaaatctgattctcctc 1640049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 16132452 - 16132388
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||| ||||||||||||||| || |||||||||||||||||||||||| ||||||||    
T  16132452 attgagagttagcctcacccttaccttaaattgatgaacaaagctctacaaaaatcagattctcc 16132388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 1254852 - 1254905
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  1254852 aatcattgagagttagcctcacccttaccttagattgatgaacaaagctctaca 1254905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 31021741 - 31021685
Alignment:
Q  191 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  31021741 gttagtctcacccttaccttagatcgatgaacaaagctctac-agaatctgattctcc 31021685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 248
Target Start/End: Complemental strand, 19443104 - 19443000
Alignment:
Q  145 tcatgttaaatcaattttcagaagttatatat--tacaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctga 242  Q
    ||||||||||||||||| ||||| ||| |||   || ||| ||||| |||||||||||||||||||||  || |||||| ||||||||||||||||| ||    
T  19443104 tcatgttaaatcaattt-cagaatttacatacactataattattgaaagttagtctcacccttaccttgaattgatgaaaaaagctctacaaaaatcaga 19443006  T
Q  243 ttctcc 248  Q
    ||||||    
T  19443005 ttctcc 19443000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 180 - 225
Target Start/End: Original strand, 1588763 - 1588808
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaa 225  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  1588763 aatcattgagagttagtctcacccttaccttagattgatgaacaaa 1588808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 13765378 - 13765434
Alignment:
Q  191 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    ||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||    
T  13765378 gttagtctcactcttaccttagatcgatgaacaaagctctac-ataatctgattctcc 13765434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 23225878 - 23225822
Alignment:
Q  191 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    ||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||    
T  23225878 gttagtctcacccttaccttagatcgatgaacaaaactctac-agaatctgattctcc 23225822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 1589811 - 1589755
Alignment:
Q  181 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaa 237  Q
    ||||||||||||||| |||||||||||||||||| || ||||||| |||||||||||    
T  1589811 atcattgagagttagcctcacccttaccttagattgaagaacaaaactctacaaaaa 1589755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 34296224 - 34296175
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctc 229  Q
    |||||||||||||||  |||||||||||||||||| ||||||||||||||    
T  34296224 aatcattgagagttaacctcacccttaccttagattgatgaacaaagctc 34296175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 9621568 - 9621528
Alignment:
Q  193 tagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  9621568 tagtctcacccttaccttagattgatgaacaaagctctaca 9621528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 34640043 - 34639985
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 213  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||||||    
T  34640043 tcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttaga 34639985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 34646717 - 34646659
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 213  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||||||    
T  34646717 tcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttaga 34646659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 212
Target Start/End: Complemental strand, 15816712 - 15816660
Alignment:
Q  162 tcagaagttatatatt--acaatcattgagagttagtctcacccttaccttag 212  Q
    |||||||||||||| |  | |||||||||||||||||||||||||||||||||    
T  15816712 tcagaagttatataatcgaaaatcattgagagttagtctcacccttaccttag 15816660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 16884627 - 16884590
Alignment:
Q  196 tctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  16884627 tctcacccttaccttagattgatgaacaaagctctaca 16884590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 21119826 - 21119769
Alignment:
Q  191 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    ||||||||||||||||||||  || ||||||||||||| ||||||||||  |||||||    
T  21119826 gttagtctcacccttaccttgaattgatgaacaaagctttacaaaaatcaaattctcc 21119769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 29614203 - 29614146
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 212  Q
    ||||||||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  29614203 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 29614146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 4477856 - 4477912
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||||    
T  4477856 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 23839197 - 23839253
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||||    
T  23839197 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 23956903 - 23956950
Alignment:
Q  200 acccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||| |||||||||||||||||||||||||||| | |||||||||||||    
T  23956903 acccctaccttagatcgatgaacaaagctctac-agaatctgattctcc 23956950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 25739355 - 25739395
Alignment:
Q  193 tagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  25739355 tagtcccacccttaccttagattgatgaacaaagctctaca 25739395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 31252423 - 31252479
Alignment:
Q  157 aattttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 213  Q
    ||||||||||| |||||||||| ||||||| | || || ||||||||||||||||||    
T  31252423 aattttcagaaattatatattataatcattaaaagataatctcacccttaccttaga 31252479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 9185028 - 9184970
Alignment:
Q  181 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatc 239  Q
    ||||||||||| ||||||||||||||||||   | |||||||||| |||| ||||||||    
T  9185028 atcattgagagatagtctcacccttaccttgatttgatgaacaaaactctccaaaaatc 9184970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 15458492 - 15458546
Alignment:
Q  159 ttttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 213  Q
    ||||||||| |||||||||| ||||||||| || || || |||||||||||||||    
T  15458492 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttaga 15458546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 15465087 - 15465141
Alignment:
Q  159 ttttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 213  Q
    ||||||||| |||||||||| ||||||||| || || || |||||||||||||||    
T  15465087 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttaga 15465141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 930152 - 930095
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 212  Q
    |||||||||||||  |||| ||||  || |||||||| ||||||||||||||||||||    
T  930152 tcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 930095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 18800436 - 18800493
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 212  Q
    ||||||||||||| ||||| ||||  || |||||||| ||||||||||||||| ||||    
T  18800436 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacattag 18800493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 25348485 - 25348542
Alignment:
Q  154 atcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    |||||||||||||| || |||| ||  || |||||||| |||||||||||||||||||    
T  25348485 atcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 25348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 5109742 - 5109678
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctc 247  Q
    |||||||||||| ||||||||||||||  || || ||||||| ||||||| |||||||| |||||    
T  5109742 attgagagttagcctcacccttaccttgaattgaagaacaaaactctacagaaaatctggttctc 5109678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 9187498 - 9187550
Alignment:
Q  159 ttttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    ||||||||| |||| |||||  || |||||||| |||||||||||||||||||    
T  9187498 ttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 12168366 - 12168418
Alignment:
Q  160 tttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 212  Q
    |||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  12168366 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 12168418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 19287275 - 19287327
Alignment:
Q  160 tttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 212  Q
    |||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  19287275 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19287327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 19785921 - 19785869
Alignment:
Q  160 tttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 212  Q
    |||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  19785921 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19785869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 19878459 - 19878511
Alignment:
Q  160 tttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 212  Q
    |||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  19878459 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19878511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 23620253 - 23620194
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgatt 244  Q
    |||||||||||| ||||||||||||||  || ||||||| ||||||||| |||||| ||||    
T  23620253 attgagagttagcctcacccttaccttgaattgatgaac-aagctctacgaaaatcagatt 23620194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 28288540 - 28288508
Alignment:
Q  181 atcattgagagttagtctcacccttaccttaga 213  Q
    ||||||||||| |||||||||||||||||||||    
T  28288540 atcattgagagatagtctcacccttaccttaga 28288508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 222415 - 222180
Alignment:
Q  1 ttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgtctcctaaacttttcaactcaaaat 100  Q
    ||||||||||| ||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  222415 ttcccaattcttattacattaatgttactaaatccttaaaacgatctgaacatgattctaagcataattaacatgtctcctacacttttcaactcaaaat 222316  T
Q  101 cagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctca 200  Q
    ||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  222315 cagtattagaaccctaattccgcaattcttatttcaagagcaattcatgttaaatcaattttcagaagttatatattacaatcattgaaagttagcctca 222216  T
Q  201 cccttaccttagatcgatgaa-caaagctctacaaaa 236  Q
    ||||||||||| ||  ||||| |||||||||||||||    
T  222215 cccttacctta-atttatgaatcaaagctctacaaaa 222180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 163; Significance: 4e-87; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 12142 - 12352
Alignment:
Q  1 ttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgtctcctaaacttttcaactcaaaat 100  Q
    |||||||||||||||||| ||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12142 ttcccaattctgattacagcaatgttaccaaatcctaaaaacaatctgaacatgattctaagcataattaacatgtctcctacacttttcaactcaaaat 12241  T
Q  101 cagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctca 200  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||||  ||||||||||||||| ||||    
T  12242 cagtattagaaccctaattccccaattcgtatttcaagaacaattcatgtggaatcaattttcagaaattatatattatgatcattgagagttagcctca 12341  T
Q  201 cccttacctta 211  Q
    |||||||||||    
T  12342 cccttacctta 12352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 163; Significance: 4e-87; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 46625807 - 46626017
Alignment:
Q  1 ttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgtctcctaaacttttcaactcaaaat 100  Q
    |||||||||||||||||| ||||||||| ||||||| |||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  46625807 ttcccaattctgattacagcaatgttacaaaatcctaaaaacgatatgatcatgattctaagcataattaacatgtctcctacacttttcaactcaaaat 46625906  T
Q  101 cagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctca 200  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  46625907 cagtattagaaccctaatcccccaattcctattccaagaacaattcatgttaaatcaattttccgaaattatatattataatcattgagagttagtctca 46626006  T
Q  201 cccttacctta 211  Q
    |||||| ||||    
T  46626007 cccttatctta 46626017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 21231060 - 21230957
Alignment:
Q  110 aaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 209  Q
    ||||||||||||| ||||  ||| ||||||||||||||||||||| |||||||||||| ||||||| ||  || |||||||| |||||||||||||||||    
T  21231060 aaccctaattccc-aatttttatctcaagaacaattcatgttaaaacaattttcagaaattatatactatgattattgagagatagtctcacccttacct 21230962  T
Q  210 tagat 214  Q
    |||||    
T  21230961 tagat 21230957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 7530152 - 7530219
Alignment:
Q  181 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    ||||||||||||||||||||||||||||||  || |||||||||||||||||||||||| ||||||||    
T  7530152 atcattgagagttagtctcacccttaccttgaattgatgaacaaagctctacaaaaatcagattctcc 7530219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 48744553 - 48744617
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||| ||||||||||||||  ||||||||||||||||||||||||||| ||||||||    
T  48744553 attgagagttagcctcacccttaccttgaatcgatgaacaaagctctacaaaaatcagattctcc 48744617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 248
Target Start/End: Original strand, 13256712 - 13256781
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctcta-caaaaatctgattctcc 248  Q
    |||||||||||||||| |||||||||||||||||| |||||| ||| ||||| |||||||||||||||||    
T  13256712 aatcattgagagttagcctcacccttaccttagattgatgaataaaactctaccaaaaatctgattctcc 13256781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 16574266 - 16574330
Alignment:
Q  183 cattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||| | |||||||||||||    
T  16574266 cattgagagttagcctcacccttaccttagattgatgaacaaagctctac-agaatctgattctcc 16574330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 16591396 - 16591332
Alignment:
Q  183 cattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||| | |||||||||||||    
T  16591396 cattgagagttagcctcacccttaccttagattgatgaacaaagctctac-agaatctgattctcc 16591332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 11382947 - 11382871
Alignment:
Q  135 caagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    |||||||||||||| ||||  |||||||||||| ||||||||||  || |||||||| |||||||||||||||||||    
T  11382947 caagaacaattcatattaagacaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 13898495 - 13898559
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    ||||| |||||| ||||||||||||||| || |||||||||||||||||||||||| ||||||||    
T  13898495 attgaaagttagcctcacccttaccttaaattgatgaacaaagctctacaaaaatcagattctcc 13898559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 248
Target Start/End: Original strand, 15214573 - 15214641
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||||||| ||||||||||||||  || |||||||| ||||||||||||||| ||||||||    
T  15214573 aatcattgagagttagcctcacccttaccttgaattgatgaacacagctctacaaaaatcagattctcc 15214641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 41285064 - 41285118
Alignment:
Q  193 tagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  41285064 tagtctcacccttaccttagatcgatgaacaaagctctac-agaatctgattctcc 41285118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 248
Target Start/End: Original strand, 23556330 - 23556433
Alignment:
Q  145 tcatgttaaatcaattttcagaagttatatat--tacaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctga 242  Q
    ||||||||||||||||| ||||| ||| |||   || ||| ||||| |||||| |||||||||||||||||| ||||||||||||||||| | |||||||    
T  23556330 tcatgttaaatcaattt-cagaatttacatacactataattattgaaagttagcctcacccttaccttagattgatgaacaaagctctac-agaatctga 23556427  T
Q  243 ttctcc 248  Q
    ||||||    
T  23556428 ttctcc 23556433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 248
Target Start/End: Original strand, 23557519 - 23557622
Alignment:
Q  145 tcatgttaaatcaattttcagaagttatatat--tacaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctga 242  Q
    ||||||||||||||||| ||||| ||| |||   || ||| ||||| |||||| |||||||||||||||||| ||||||||||||||||| | |||||||    
T  23557519 tcatgttaaatcaattt-cagaatttaaatacactataattattgaaagttagcctcacccttaccttagattgatgaacaaagctctac-ataatctga 23557616  T
Q  243 ttctcc 248  Q
    ||||||    
T  23557617 ttctcc 23557622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 213
Target Start/End: Original strand, 14567055 - 14567260
Alignment:
Q  6 aattctgattacaacaatgttactaaatcctgaaaacgatctgaacatga-ttctaagcataattaacatgtctcctaaa-cttttcaactcaaaatcag 103  Q
    ||||| |||||||||||  ||| ||| |||| ||| ||||||||| |||| ||||||||||||||||||||  |||| |  ||||||  |  ||||||||    
T  14567055 aattcggattacaacaacatta-taattcctaaaatcgatctgaatatgaattctaagcataattaacatgaatccttactcttttctcc--aaaatcag 14567151  T
Q  104 tattagaaccctaattccccaattcctattt--caagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcac 201  Q
    ||| ||||||||||||||| ||||| |||||  ||||||||||||   | ||| ||||||||||||   |||||||| |||||||||  ||||| |||||    
T  14567152 tat-agaaccctaattccc-aattcttatttttcaagaacaattctaatcaaa-caattttcagaaaccatatattataatcattgaaggttagcctcac 14567248  T
Q  202 ccttaccttaga 213  Q
    ||||||||||||    
T  14567249 ccttaccttaga 14567260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 180 - 225
Target Start/End: Complemental strand, 15727398 - 15727353
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaa 225  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  15727398 aatcattgagagttagtctcacccttaccttagattgatgaacaaa 15727353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 212
Target Start/End: Original strand, 148558 - 148675
Alignment:
Q  95 caaaatcagtattagaaccctaattccccaattcctattt--caagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagt 192  Q
    |||||||||||| ||||||||||||||| ||||| |||||  ||||||||||||   | ||| ||||||||||||   |||||||| |||||||||  ||    
T  148558 caaaatcagtat-agaaccctaattccc-aattcttatttttcaagaacaattctaatcaaaacaattttcagaaaccatatattataatcattgaaggt 148655  T
Q  193 tagtctcacccttaccttag 212  Q
    ||| ||||||||||||||||    
T  148656 tagcctcacccttaccttag 148675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 8249277 - 8249213
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||| ||||||||||||||  |  |||||||||||||||||||||||| ||||||||    
T  8249277 attgagagttagcctcacccttaccttgaactgatgaacaaagctctacaaaaatcagattctcc 8249213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 11389424 - 11389348
Alignment:
Q  135 caagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    |||||||||||| | ||||  |||||||||||| ||||||||||  || |||||||| |||||||||||||||||||    
T  11389424 caagaacaattcgtattaagacaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 15726350 - 15726406
Alignment:
Q  181 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaa 237  Q
    ||||||||||||||| |||||||||||||||||| || ||||||| |||||||||||    
T  15726350 atcattgagagttagcctcacccttaccttagattgaagaacaaaactctacaaaaa 15726406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 214
Target Start/End: Complemental strand, 20311128 - 20311049
Alignment:
Q  135 caagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttagat 214  Q
    ||||||||||||||||||   |||||||||||| |||||  |||  || |||||||| ||||||||||||||||||||||    
T  20311128 caagaacaattcatgttacgacaattttcagaaattatacgttatgattattgagagatagtctcacccttaccttagat 20311049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 247
Target Start/End: Original strand, 42042186 - 42042252
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctc 247  Q
    |||||||||||||||||||||||||||||||| || || ||||||||||||||| || |||| |||||    
T  42042186 aatcattgagagttagtctcacccttacctta-attgaagaacaaagctctacataattctggttctc 42042252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 16250243 - 16250201
Alignment:
Q  190 agttagtctcacccttaccttagatcgatgaacaaagctctac 232  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  16250243 agttagtcccacccttaccttagatcgatgaacaaagctctac 16250201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 39994886 - 39994818
Alignment:
Q  181 atcattgagagttagtctcacccttacctt-agatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||||||||||||| ||||||| |  | ||||||||||||||| |||||||| ||||||||    
T  39994886 atcattgagagttagtctcacctttaccttgattttgatgaacaaagctctccaaaaatcagattctcc 39994818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 14188314 - 14188260
Alignment:
Q  191 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattct 246  Q
    ||||| ||||||||||||||||||||||||||||| |||||| | |||||||||||    
T  14188314 gttagcctcacccttaccttagatcgatgaacaaaactctac-agaatctgattct 14188260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 14190912 - 14190858
Alignment:
Q  191 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattct 246  Q
    ||||| ||||||||||||||||||||||||||||| |||||| | |||||||||||    
T  14190912 gttagcctcacccttaccttagatcgatgaacaaaactctac-agaatctgattct 14190858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 29005095 - 29005142
Alignment:
Q  186 tgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    |||| |||||||||||||||||||||||| |||||||||| |||||||    
T  29005095 tgagtgttagtctcacccttaccttagattgatgaacaaatctctaca 29005142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 37726892 - 37726839
Alignment:
Q  162 tcagaagttatatatt--acaatcattgagagttagtctcacccttaccttaga 213  Q
    |||||||||||||| |  | ||||||||||||||||||||||||||||||||||    
T  37726892 tcagaagttatataatctaaaatcattgagagttagtctcacccttaccttaga 37726839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 230
Target Start/End: Complemental strand, 12207722 - 12207673
Alignment:
Q  181 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctct 230  Q
    ||||||||||||||||||||||||||||||   | |||||||||||||||    
T  12207722 atcattgagagttagtctcacccttaccttgatttgatgaacaaagctct 12207673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 14422983 - 14423040
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 212  Q
    ||||||||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  14422983 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 14423040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 34958562 - 34958614
Alignment:
Q  162 tcagaagttatata--ttacaatcattgagagttagtctcacccttaccttag 212  Q
    ||||||||||||||  ||| ||| |||||||||||||||||||||||||||||    
T  34958562 tcagaagttatataatttataattattgagagttagtctcacccttaccttag 34958614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 212
Target Start/End: Complemental strand, 831699 - 831633
Alignment:
Q  147 atgttaaatcaattttcagaagttatata--ttacaatcattgagagttagtctcacccttaccttag 212  Q
    ||||||||||||  || ||||||||||||  ||| ||| |||||||||||||||||||||||||||||    
T  831699 atgttaaatcaaaatt-agaagttatataatttataattattgagagttagtctcacccttaccttag 831633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 212
Target Start/End: Complemental strand, 1196879 - 1196813
Alignment:
Q  147 atgttaaatcaattttcagaagttatata--ttacaatcattgagagttagtctcacccttaccttag 212  Q
    ||||||||||||  || ||||||||||||  ||| ||| |||||||||||||||||||||||||||||    
T  1196879 atgttaaatcaaaatt-agaagttatataatttataattattgagagttagtctcacccttaccttag 1196813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 16009575 - 16009631
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||||    
T  16009575 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 250
Target Start/End: Complemental strand, 16107879 - 16107819
Alignment:
Q  191 gttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctcctc 250  Q
    |||||||||||||||||||| ||| || ||||||| ||||||| ||||||||||| |||||    
T  16107879 gttagtctcacccttacctttgattgaagaacaaaactctacagaaaatctgattatcctc 16107819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 230
Target Start/End: Complemental strand, 12201115 - 12201068
Alignment:
Q  183 cattgagagttagtctcacccttaccttagatcgatgaacaaagctct 230  Q
    ||||||||||||||||||||||||||||   | |||||||||||||||    
T  12201115 cattgagagttagtctcacccttaccttgatttgatgaacaaagctct 12201068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 31155396 - 31155450
Alignment:
Q  159 ttttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 213  Q
    ||||||||| |||||||||| ||||||||| || || || |||||||||||||||    
T  31155396 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttaga 31155450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 13679491 - 13679548
Alignment:
Q  154 atcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    ||||||||||| || |||||||| |  |||||||| || |||||||||||||||||||    
T  13679491 atcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 8777243 - 8777295
Alignment:
Q  190 agttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctga 242  Q
    |||||| |||||||||||||||||| |||||| || |||  ||||||||||||    
T  8777243 agttagcctcacccttaccttagattgatgaataatgcttaacaaaaatctga 8777295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 12590695 - 12590643
Alignment:
Q  160 tttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 212  Q
    |||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  12590695 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 12590643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 13007435 - 13007487
Alignment:
Q  160 tttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 212  Q
    |||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  13007435 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 13007487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 13893480 - 13893520
Alignment:
Q  193 tagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    ||||| |||||||||||||||| |||||||||| |||||||    
T  13893480 tagtcccacccttaccttagattgatgaacaaaactctaca 13893520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 14319684 - 14319628
Alignment:
Q  157 aattttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 213  Q
    ||||||||||| ||||| |||| ||||||||| || || || |||||||||||||||    
T  14319684 aattttcagaaattatacattaaaatcattgaaagataatcccacccttaccttaga 14319628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 15168174 - 15168230
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    ||||||||||||| ||||| ||||  || || ||||| |||||||||||||||||||    
T  15168174 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 15168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 155; Significance: 2e-82; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 24661423 - 24661632
Alignment:
Q  1 ttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgtctcctaaacttttcaactcaaaat 100  Q
    |||||||||||||||||| |||||||||  |||||| |||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  24661423 ttcccaattctgattacagcaatgttacagaatcctaaaaatgatctgaacatgattctaagcataattaacatgtctcctacacctttcaactcaaaat 24661522  T
Q  101 cagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctca 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||  ||||| ||||||||| ||||    
T  24661523 cagtattagaaccctaattccccaattcctatttcaagaac-attcatgttaaatcaattttcagaaattatatattatgatcatcgagagttagcctca 24661621  T
Q  201 cccttacctta 211  Q
    |||||||||||    
T  24661622 cccttacctta 24661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 180 - 248
Target Start/End: Complemental strand, 10039092 - 10039024
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||||||| ||||||||||||||  || |||||||||||||||||||||||| ||||||||    
T  10039092 aatcattgagagttagcctcacccttaccttgaattgatgaacaaagctctacaaaaatcagattctcc 10039024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 24161299 - 24161366
Alignment:
Q  181 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    ||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||  |||||||    
T  24161299 atcattgagagttagtctcacccttaccttgaattgatgaacaaagctctacaaaaatcaaattctcc 24161366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 184 - 250
Target Start/End: Complemental strand, 24273061 - 24272995
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcctc 250  Q
    |||||||||||| ||||||||||||||  || |||||||||||||||||||||||| ||||||||||    
T  24273061 attgagagttagcctcacccttaccttgaattgatgaacaaagctctacaaaaatcagattctcctc 24272995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 21245705 - 21245769
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||| ||||||||||||||  || |||||||||||||||||||||||| ||||||||    
T  21245705 attgagagttagcctcacccttaccttgaattgatgaacaaagctctacaaaaatcagattctcc 21245769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 23375940 - 23375991
Alignment:
Q  182 tcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  23375940 tcattgaaagttagcctcacccttaccttagatcgatgaacaaagctctaca 23375991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 37380539 - 37380593
Alignment:
Q  193 tagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  37380539 tagtctcacccttaccttagatcgatgaacaaagctctac-agaatctgattctcc 37380593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 212
Target Start/End: Complemental strand, 6260329 - 6260171
Alignment:
Q  55 attctaagcataattaacatgtctcctaaa-cttttcaactcaaaatcagtattagaaccctaattccccaattcctattt--caagaacaattcatgtt 151  Q
    |||||||||||||||||||||  |||| |  ||||||  | |||||||||||| ||||||||||||||| ||||| |||||  ||||||||||||   |     
T  6260329 attctaagcataattaacatgaatccttactcttttcttc-caaaatcagtat-agaaccctaattcccaaattcttatttttcaagaacaattctaatc 6260232  T
Q  152 aaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 212  Q
    ||| ||||||||||||   |||||||| |||| ||||  ||||| ||||||||||||||||    
T  6260231 aaaacaattttcagaaaccatatattataatcgttgaaggttagcctcacccttaccttag 6260171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 250
Target Start/End: Original strand, 19802354 - 19802445
Alignment:
Q  162 tcagaagttatata--ttacaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctcctc 250  Q
    ||||||||| ||||  ||| ||| ||||||||||||||||||||||||||| ||| || ||||||| ||||| | |||||||||||||||||    
T  19802354 tcagaagttctataatttataattattgagagttagtctcacccttacctttgattgaagaacaaaactctagagaaaatctgattctcctc 19802445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 211
Target Start/End: Original strand, 9242837 - 9243016
Alignment:
Q  33 tcctgaaaacgatctgaacatga-ttctaagcataattaacatgtctcctaaa-cttttcaactcaaaatcagtattagaaccctaattccccaattcct 130  Q
    |||| ||| ||||||||| |||| ||||||||||||||||||||  |||| |  ||||||  | |||||| ||||| ||||||||||||||| ||||| |    
T  9242837 tcctaaaatcgatctgaatatgaattctaagcataattaacatgaatccttactcttttcttc-caaaattagtat-agaaccctaattccc-aattctt 9242933  T
Q  131 attt--caagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    ||||  ||||||||||||   | ||| ||||||||||||   |||||||| |||||||||  ||||| |||||||||||||||    
T  9242934 atttttcaagaacaattctaatcaaaacaattttcagaaaccatatattataatcattgaaggttagcctcacccttacctta 9243016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 23265119 - 23265197
Alignment:
Q  132 tttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    ||||||||||||||||  ||| |||||||||||||| ||||||| ||  || |||||||| |||||||||||||||||||    
T  23265119 tttcaagaacaattcaa-ttagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 23280187 - 23280265
Alignment:
Q  132 tttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    ||||||||||||||||  ||| |||||||||||||| ||||||| ||  || |||||||| |||||||||||||||||||    
T  23280187 tttcaagaacaattcaa-ttagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 6477257 - 6477200
Alignment:
Q  191 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    ||||| ||||||||||||||  || |||||||||||||||||||||||| ||||||||    
T  6477257 gttagcctcacccttaccttgaattgatgaacaaagctctacaaaaatcagattctcc 6477200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 25652244 - 25652312
Alignment:
Q  181 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctcta-caaaaatctgattctcc 248  Q
    ||||||||||||||||| ||||||||||||   | |||||||||||||||| |||||||| ||||||||    
T  25652244 atcattgagagttagtcccacccttaccttgatttgatgaacaaagctctaccaaaaatcagattctcc 25652312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 26904425 - 26904489
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    ||||||||||||  |||||||||||||  ||  ||||||||||||||||||||||| ||||||||    
T  26904425 attgagagttagcatcacccttaccttgaatttatgaacaaagctctacaaaaatcagattctcc 26904489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 21908357 - 21908414
Alignment:
Q  154 atcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    |||||||||||||| |||||||| |  || |||||||| |||||||||||||||||||    
T  21908357 atcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 23086421 - 23086474
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    |||||||||||||||| ||||||||||||||||||  | ||||||| |||||||    
T  23086421 aatcattgagagttagcctcacccttaccttagattaaagaacaaaactctaca 23086474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 6483716 - 6483772
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||||    
T  6483716 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 6487183 - 6487239
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||||    
T  6487183 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 247
Target Start/End: Complemental strand, 23338424 - 23338358
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatc-gatgaacaaagctctacaaaaatctgattctc 247  Q
    ||||||||  |||||| |||||||||||||||  || |||||||||||||||||  |||||||||||||    
T  23338424 aatcattgcaagttagcctcacccttaccttaattcagatgaacaaagctctac--aaatctgattctc 23338358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 22110559 - 22110622
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||| ||||||||||||||  || ||||||| ||||||||| |||||| | ||||||    
T  22110559 attgagagttagcctcacccttaccttgaattgatgaac-aagctctacgaaaatcagtttctcc 22110622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 26583830 - 26583882
Alignment:
Q  160 tttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 212  Q
    |||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  26583830 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 26583882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 27207774 - 27207718
Alignment:
Q  157 aattttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 213  Q
    ||||||||||| ||||| |||| ||||||||| || || || |||||||||||||||    
T  27207774 aattttcagaaattatacattaaaatcattgaaagataatcccacccttaccttaga 27207718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 119; Significance: 7e-61; HSPs: 2)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 3 - 247
Target Start/End: Complemental strand, 2834 - 2592
Alignment:
Q  3 cccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgtctcctaaacttttcaactcaaaatca 102  Q
    |||||||||||||||||||| ||||  ||||||| ||| ||||||||||| ||| ||| |||||||||||||| |||||| ||||||||  ||||||||     
T  2834 cccaattctgattacaacaacgttataaaatcctaaaatcgatctgaacacgat-ctaggcataattaacatgactcctacacttttcatttcaaaatcg 2736  T
Q  103 gtattagaaccctaattccccaattcctattt-caagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcac 201  Q
    |||| ||||||||||||| | ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  2735 gtat-agaaccctaattctc-aattcttattttcaagaacaattcatgttaaatcaattttcagaagttatatattataatcattgagagttagcctcac 2638  T
Q  202 ccttaccttagatcgatgaacaaagctctaca-aaaatctgattctc 247  Q
    |||||||||| || || ||| ||||||||||| |||||||| |||||    
T  2637 ccttacctta-attgaagaataaagctctacacaaaatctggttctc 2592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 250
Target Start/End: Original strand, 1791 - 1882
Alignment:
Q  162 tcagaagttatatatt--acaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctcctc 250  Q
    |||||||||||||| |  | ||||||||||||||||||||||||||||||| ||| || ||| ||| ||||||| ||||||||| |||||||    
T  1791 tcagaagttatataatctaaaatcattgagagttagtctcacccttacctttgattgaagaaaaaaactctacagaaaatctgagtctcctc 1882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 121748 - 121958
Alignment:
Q  1 ttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgtctcctaaacttttcaact-caaaa 99  Q
    |||||||||| ||||||| |||||||||   ||||| ||| ||||||||||||||||||||||||||||||||||  ||||| ||||||   || |||||    
T  121748 ttcccaattccgattacagcaatgttacagcatcctaaaatcgatctgaacatgattctaagcataattaacatgattcctacactttttcccttcaaaa 121847  T
Q  100 tcagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctc 199  Q
     ||||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||  |||||||||| |||||||||||||||| |||    
T  121848 acagtaatagaaccctaattctc-aattcctatttcaagaacaattcatgttaactcaattttcagattttatatattataatcattgagagttagcctc 121946  T
Q  200 acccttacctta 211  Q
    ||||||||||||    
T  121947 acccttacctta 121958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 132625 - 132834
Alignment:
Q  1 ttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgtctcctaaacttttcaactcaaaat 100  Q
    |||||||||| ||||||| || |||||| | ||||| ||| ||||||||||||||||||||||||||||||||||  ||||| ||||||   ||  |||     
T  132625 ttcccaattccgattacatcagtgttacaacatcctaaaatcgatctgaacatgattctaagcataattaacatgattcctacactttttcccttcaaaa 132724  T
Q  101 cagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctca 200  Q
    ||||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||  |||||||||| |||||||||||||||| ||||    
T  132725 cagtaatagaaccctaattctc-aattcctatttcaagaacaattcatgttaactcaattttcagattttatatattataatcattgagagttagcctca 132823  T
Q  201 cccttacctta 211  Q
    |||||||||||    
T  132824 cccttacctta 132834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 6 - 235
Target Start/End: Original strand, 6827 - 7055
Alignment:
Q  6 aattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgtctcctaaacttttcaactcaaaatcagta 105  Q
    ||||||||||||| ||| ||||  ||||||| ||| |||| |||||| ||||||||||||||||||||||  ||||| ||| |||   |||||||| |||    
T  6827 aattctgattacagcaacgttataaaatcctaaaatcgatttgaacacgattctaagcataattaacatgattcctacactcttcctttcaaaatcggta 6926  T
Q  106 ttagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcaccctt 205  Q
     |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||    
T  6927 atagaaccctaattctc-aattcctatttcaagaacaattcatgttaaatcaattttcagaagttagatattataatcattgagagttagcctcaccctt 7025  T
Q  206 accttagatc-gatgaacaaagctctacaaa 235  Q
    | ||||  || |||||||||| |||||||||    
T  7026 atcttaattcagatgaacaaa-ctctacaaa 7055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 110; Significance: 2e-55; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 3 - 247
Target Start/End: Original strand, 21931546 - 21931788
Alignment:
Q  3 cccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgtctcctaaacttttcaactcaaaatca 102  Q
    |||||||||||||||| ||| ||||  ||||||| ||| ||||||||||| ||| ||||| |||||||||||| |||||| |||||||   ||||||||     
T  21931546 cccaattctgattacagcaacgttataaaatcctaaaatcgatctgaacacgat-ctaagtataattaacatgactcctacacttttcctttcaaaatcg 21931644  T
Q  103 gtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacc 202  Q
     || ||||||||||||||   |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  21931645 ataatagaaccctaattctt-aattcctatttcaagatcaattcatgttaaatcaattttcagaagttatatattataatcattgagagttagcctcacc 21931743  T
Q  203 cttaccttagatc-gatgaacaaagctctacaaaaatctgattctc 247  Q
    |||||||||  || |||||| ||| | ||||||||||||| |||||    
T  21931744 cttaccttaattcagatgaa-aaaaccctacaaaaatctggttctc 21931788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 19750397 - 19750605
Alignment:
Q  1 ttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgtctcctaaacttttcaactcaaaat 100  Q
    ||||||||||||||||||||||| ||||   ||||| ||| ||||||||||| | |||||| |||||||||||||  ||||| |||||||   |||||||    
T  19750397 ttcccaattctgattacaacaattttacagcatcctaaaatcgatctgaacaggtttctaaacataattaacatgattcctatacttttc-tttcaaaat 19750495  T
Q  101 cagtattagaaccctaattccccaattcctattt-caagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctc 199  Q
    | ||| ||||||||||||| | |||||  ||||| |||||||||||||||| |||| ||||||||||| | |||||||| | |||||||  ||||| |||    
T  19750496 cggta-tagaaccctaatt-ctcaatttttatttccaagaacaattcatgtaaaattaattttcagaaatcatatattatagtcattgaaggttagcctc 19750593  T
Q  200 acccttacctta 211  Q
    ||||||||||||    
T  19750594 acccttacctta 19750605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 14056664 - 14056561
Alignment:
Q  110 aaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 209  Q
    |||||||||| |||||||  ||| ||||||||||||||||||||| |||||||||||| ||| ||| ||  || |||||||| |||||||||||||||||    
T  14056664 aaccctaatttcccaatttttatctcaagaacaattcatgttaaa-caattttcagaatttacatactattattattgagagatagtctcacccttacct 14056566  T
Q  210 tagat 214  Q
    |||||    
T  14056565 tagat 14056561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 214
Target Start/End: Original strand, 25111931 - 25112034
Alignment:
Q  110 aaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 209  Q
    |||||||||| |||||||  ||| ||||||||||||||||||||| |||||||||||| ||| ||| ||  || |||||||| |||||||||||||||||    
T  25111931 aaccctaatttcccaatttttatctcaagaacaattcatgttaaa-caattttcagaatttacatactattattattgagagatagtctcacccttacct 25112029  T
Q  210 tagat 214  Q
    |||||    
T  25112030 tagat 25112034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 250
Target Start/End: Complemental strand, 21860585 - 21860494
Alignment:
Q  162 tcagaagttatatatt--acaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctcctc 250  Q
    |||||||||||||| |  | ||||||||||||||||||||||||||||||| ||| || ||||||| ||||||| |||||||||||||||||    
T  21860585 tcagaagttatataatctataatcattgagagttagtctcacccttacctttgattgaagaacaaaactctacagaaaatctgattctcctc 21860494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 8413769 - 8413713
Alignment:
Q  191 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  8413769 gttagtctcacccttaccttagatcgatgaacaaagctctac-agaatctgattctcc 8413713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 11775745 - 11775801
Alignment:
Q  191 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  11775745 gttagtctcacccttaccttagatcgatgaacaaagctctac-agaatctgattctcc 11775801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 18023497 - 18023441
Alignment:
Q  191 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  18023497 gttagtctcacccttaccttagatcgatgaacaaagctctac-ataatctgattctcc 18023441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 20387509 - 20387572
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||| | |||||||||||||    
T  20387509 attgagagttagcctcacccttaccttagattgatgaacaaagctctac-agaatctgattctcc 20387572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 248
Target Start/End: Complemental strand, 22433646 - 22433579
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| |||||| | |||||||||||||    
T  22433646 aatcattgagagttagcctcacccttaccttagattgatgaacaaaactctac-agaatctgattctcc 22433579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 42559486 - 42559434
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctac 232  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  42559486 aatcattgagagttagcctcacccttaccttagattgatgaacaaagctctac 42559434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 15635146 - 15635069
Alignment:
Q  162 tcagaagttatatatt--acaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaa 237  Q
    |||||||||||||| |  | ||||||||||||||||| |||||||||||||  || ||||||||||||||||||||||    
T  15635146 tcagaagttatataatctaaaatcattgagagttagtatcacccttaccttgaattgatgaacaaagctctacaaaaa 15635069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 20494381 - 20494315
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattct 246  Q
    |||||||||||||||| ||||||||||||||  || ||||||||| |||||||||||||| ||||||    
T  20494381 aatcattgagagttagcctcacccttaccttgaattgatgaacaacgctctacaaaaatcagattct 20494315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 21840250 - 21840366
Alignment:
Q  3 cccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgtctcctaaacttttcaactcaaaatca 102  Q
    |||||||||||||||| ||| ||||  ||||||| |||  ||||||||||||| |||||| |||||||||||| ||||||  ||||||   |||||||      
T  21840250 cccaattctgattacagcaacgttataaaatcctaaaattgatctgaacatga-tctaagtataattaacatgactcctatccttttcctttcaaaattg 21840348  T
Q  103 gtattagaaccctaattc 120  Q
    ||| ||||||||||||||    
T  21840349 gtaatagaaccctaattc 21840366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 22617655 - 22617722
Alignment:
Q  181 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    ||||||||||||||||||||||||||||||   | ||||||||||||| | |||||||| ||||||||    
T  22617655 atcattgagagttagtctcacccttaccttgatttgatgaacaaagcttttcaaaaatcagattctcc 22617722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 23482131 - 23482053
Alignment:
Q  132 tttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    ||||||||||||||||  ||| |||||||||||||| ||||||| ||  || |||||||| |||||||||||||||||||    
T  23482131 tttcaagaacaattcaa-ttagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 19882979 - 19883035
Alignment:
Q  191 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    ||||| ||||||||||||||||||||||||||||| |||||| | |||||||||||||    
T  19882979 gttagcctcacccttaccttagatcgatgaacaaaactctac-agaatctgattctcc 19883035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 22815622 - 22815558
Alignment:
Q  186 tgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcctc 250  Q
    |||||||||| |||||||||||||||||| ||||||  || |||||| ||||||| |||||||||    
T  22815622 tgagagttagcctcacccttaccttagattgatgaatcaaactctaccaaaatctaattctcctc 22815558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 34951458 - 34951498
Alignment:
Q  193 tagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  34951458 tagtctcacccttaccttagattgatgaacaaagctctaca 34951498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 211
Target Start/End: Original strand, 18614250 - 18614327
Alignment:
Q  133 ttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    |||||||||||||||  ||  |||||||||||||| |||||||| |  || |||||||| |||||||||||||||||||    
T  18614250 ttcaagaacaattcaa-ttggatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 25657535 - 25657478
Alignment:
Q  190 agttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    ||||| || ||||||||| |||||||||||||||||||||||| | |||||||||||||    
T  25657535 agttactcccacccttactttagatcgatgaacaaagctctac-agaatctgattctcc 25657478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 44477621 - 44477679
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 213  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||||||    
T  44477621 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 44477679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 44492779 - 44492837
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 213  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||||||    
T  44492779 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 44492837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 212
Target Start/End: Complemental strand, 27940953 - 27940851
Alignment:
Q  110 aaccctaattccccaattcctattt--caagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttac 207  Q
    ||||||||||||| ||||| |||||  ||||||||||||   | ||| |||||||||||| | |||||||| |||||||||  ||||| |||||||||||    
T  27940953 aaccctaattccc-aattcttatttttcaagaacaattctaatcaaa-caattttcagaaatcatatattataatcattgaaggttagcctcacccttac 27940856  T
Q  208 cttag 212  Q
    |||||    
T  27940855 cttag 27940851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 15003129 - 15003066
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||||||||| ||||||||  || ||||||| ||||||||| |||||| ||||||||    
T  15003129 attgagagttagtctcactcttaccttgaattgatgaac-aagctctacgaaaatcagattctcc 15003066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 22005095 - 22005055
Alignment:
Q  193 tagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  22005095 tagtcccacccttaccttagattgatgaacaaagctctaca 22005055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 24980136 - 24980200
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctc 247  Q
    |||||||||||| ||||||||||||||  || || ||||||||||||||| |||||||| |||||    
T  24980136 attgagagttagcctcacccttaccttgaattgaagaacaaagctctacagaaaatctggttctc 24980200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 248
Target Start/End: Original strand, 36601395 - 36601438
Alignment:
Q  204 ttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    ||||||||||||||||||||||||||||| | |||||||||||||    
T  36601395 ttaccttagatcgatgaacaaagctctac-agaatctgattctcc 36601438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 38184747 - 38184696
Alignment:
Q  162 tcagaagttatata--ttacaatcattgagagttagtctcacccttacctta 211  Q
    ||||||||||||||  ||| ||| ||||||||||||||||||||||||||||    
T  38184747 tcagaagttatataatttataattattgagagttagtctcacccttacctta 38184696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 44522197 - 44522157
Alignment:
Q  193 tagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  44522197 tagtcccacccttaccttagattgatgaacaaagctctaca 44522157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 9404929 - 9404867
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctga 242  Q
    ||||||||  |||||| |||||||||||||||||| |||||| || |||  ||||||||||||    
T  9404929 aatcattgcaagttagcctcacccttaccttagattgatgaataatgcttaacaaaaatctga 9404867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 233
Target Start/End: Complemental strand, 11250795 - 11250761
Alignment:
Q  199 cacccttaccttagatcgatgaacaaagctctaca 233  Q
    |||||||||||||||| ||||||||||||||||||    
T  11250795 cacccttaccttagattgatgaacaaagctctaca 11250761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 209
Target Start/End: Original strand, 364884 - 364913
Alignment:
Q  180 aatcattgagagttagtctcacccttacct 209  Q
    ||||||||||||||||||||||||||||||    
T  364884 aatcattgagagttagtctcacccttacct 364913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 214
Target Start/End: Complemental strand, 21325797 - 21325764
Alignment:
Q  181 atcattgagagttagtctcacccttaccttagat 214  Q
    ||||||||||||||| ||||||||||||||||||    
T  21325797 atcattgagagttagcctcacccttaccttagat 21325764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 247
Target Start/End: Original strand, 28854836 - 28854902
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatc-gatgaacaaagctctacaaaaatctgattctc 247  Q
    ||||||||  |||||| |||||||||||||||  || |||||||||||||||||  |||||||||||||    
T  28854836 aatcattgcaagttagcctcacccttaccttaattcagatgaacaaagctctac--aaatctgattctc 28854902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 39364918 - 39364975
Alignment:
Q  154 atcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    |||||||||||||| || |||| ||  || |||||||| |||||||||||||||||||    
T  39364918 atcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 39364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 21330858 - 21330898
Alignment:
Q  193 tagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    ||||| |||||||||||||||| |||||| |||||||||||    
T  21330858 tagtcccacccttaccttagattgatgaataaagctctaca 21330898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 21966719 - 21966679
Alignment:
Q  193 tagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    ||||| ||||||||||||| || ||||||||||||||||||    
T  21966719 tagtcccacccttaccttacattgatgaacaaagctctaca 21966679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 21979485 - 21979445
Alignment:
Q  193 tagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    ||||| |||| ||||||||||| ||||||||||||||||||    
T  21979485 tagtcccacctttaccttagattgatgaacaaagctctaca 21979445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 21999456 - 21999416
Alignment:
Q  193 tagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    ||||| |||||||||||||||| | ||||||||||||||||    
T  21999456 tagtcccacccttaccttagattggtgaacaaagctctaca 21999416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 45134130 - 45134078
Alignment:
Q  190 agttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctga 242  Q
    |||||| |||||||||||||||||| |||||| || |||  ||||||||||||    
T  45134130 agttagcctcacccttaccttagattgatgaataatgcttaacaaaaatctga 45134078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0600 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 3 - 247
Target Start/End: Original strand, 582 - 824
Alignment:
Q  3 cccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgtctcctaaacttttcaactcaaaatca 102  Q
    ||||||| |||||||||||| ||||  ||||||| ||| ||||||||||| ||| ||| |||||||||||||| |||||| ||||||||  ||||||||     
T  582 cccaattatgattacaacaacgttataaaatcctaaaatcgatctgaacacgat-ctaggcataattaacatgactcctacacttttcatttcaaaatct 680  T
Q  103 gtattagaaccctaattccccaattcctattt-caagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcac 201  Q
    |||| |||| ||||| || | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  681 gtat-agaatcctaactctc-aattcctattttcaagaacaattcatgttaaatcaattttcagaagttatatattataatcattgagagttagcctcac 778  T
Q  202 ccttaccttagatcgatgaacaaagctctaca-aaaatctgattctc 247  Q
    || ||||||| || || ||  ||||||||||| |||||||| |||||    
T  779 ccctacctta-attgaagagtaaagctctacataaaatctggttctc 824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 39717 - 39508
Alignment:
Q  1 ttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgtctcctaaacttttcaact-caaaa 99  Q
    ||||||||||||||||||||||||||||   ||||| ||| ||||||||||| | ||||||||||||| ||||||  ||||| ||||||   || |||||    
T  39717 ttcccaattctgattacaacaatgttacagcatcctaaaatcgatctgaacaggtttctaagcataatcaacatgattcctacactttttcccttcaaaa 39618  T
Q  100 tcagtattagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctc 199  Q
    |||||| ||| |||||||||| | ||||||||| ||||||||||||||  |||||||||||||| ||| ||||||||||  ||||||||||||||| |||    
T  39617 tcagtagtagtaccctaattcac-aattcctatctcaagaacaattcaatttaaatcaattttctgaaattatatattatgatcattgagagttagcctc 39519  T
Q  200 acccttacctt 210  Q
    |||||||||||    
T  39518 acccttacctt 39508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 81; Significance: 3e-38; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 128866 - 128766
Alignment:
Q  1 ttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaagcataattaacatgtctcctaaacttttcaactcaaaat 100  Q
    |||||||||||||||||| |||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  128866 ttcccaattctgattacagcaatgttacagaatcctaaaaacgatctgaacatgattctaagcataattaacatgtctcctacacttttcaactcaaaat 128767  T
Q  101 c 101  Q
    |    
T  128766 c 128766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 116873 - 116951
Alignment:
Q  132 tttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    ||||||||||||||||  ||| |||||||||||||| ||||||| ||  || |||||||| |||||||||||||||||||    
T  116873 tttcaagaacaattcaa-ttagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 116951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 60448 - 60511
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||||||||||||||||||  || ||||||| ||||||||| |||||| ||||||||    
T  60448 attgagagttagtctcacccttaccttgaattgatgaac-aagctctacgaaaatcagattctcc 60511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 15099 - 14997
Alignment:
Q  108 agaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttac 207  Q
    ||||||||||||||| |||   ||| ||||||||||||||||||||| |||||||||||| ||||||||||  |||||||||||||||||||||||||||    
T  15099 agaaccctaattccc-aatctttatctcaagaacaattcatgttaaaacaattttcagaaattatatattaagatcattgagagttagtctcacccttac 15001  T
Q  208 ctta 211  Q
    ||||    
T  15000 ctta 14997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 40633 - 40529
Alignment:
Q  110 aaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 209  Q
    |||||||||| |||||||  ||| ||||||||||||||||||||| |||||||||||| ||||||| ||  || |||||||| |||||||||||||||||    
T  40633 aaccctaatttcccaatttttatctcaagaacaattcatgttaaaacaattttcagaaattatatactatgattattgagagatagtctcacccttacct 40534  T
Q  210 tagat 214  Q
    |||||    
T  40533 tagat 40529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 214
Target Start/End: Original strand, 135427 - 135531
Alignment:
Q  110 aaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 209  Q
    |||||||||| |||||||  ||| ||||||||||||||||||||| |||||||||||| ||||||| ||  || |||||||| |||||||||||||||||    
T  135427 aaccctaatttcccaatttttatctcaagaacaattcatgttaaaacaattttcagaaattatatactatgattattgagagatagtctcacccttacct 135526  T
Q  210 tagat 214  Q
    |||||    
T  135527 tagat 135531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 211
Target Start/End: Original strand, 34316 - 34495
Alignment:
Q  33 tcctgaaaacgatctgaacatga-ttctaagcataattaacatgtctcctaaa-cttttcaactcaaaatcagtattagaaccctaattccccaattcct 130  Q
    |||| ||| ||||||||| |||| ||||||||||||||||||||  |||| |  ||||||  | |||||||||||| ||||||||||||||| ||||| |    
T  34316 tcctaaaatcgatctgaatatgaattctaagcataattaacatgaatccttactcttttcttc-caaaatcagtat-agaaccctaattccc-aattctt 34412  T
Q  131 attt--caagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    ||||  ||||||||||||   | ||| ||||||||||||   |||||||| |||| ||||  ||||| |||||||||||||||    
T  34413 atttttcaagaacaattctaatcaaaacaattttcagaaaccatatattataatctttgaaggttagcctcacccttacctta 34495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 176
Target Start/End: Complemental strand, 81415 - 81246
Alignment:
Q  6 aattctgattacaacaatgttactaaatcctgaaaacgatctgaacatga-ttctaagcataattaacatgtctcctaaacttttcaactcaaaatcagt 104  Q
    ||||||||||||| |||| || ||||||  ||||| | ||||||||| || ||||||||| | | ||||||  ||||| |||||||   |||||||||||    
T  81415 aattctgattacagcaatatt-ctaaattttgaaatcaatctgaacacgaattctaagcacattaaacatgattcctacacttttcccttcaaaatcagt 81317  T
Q  105 attagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatat 176  Q
    | |||||||||||||| | | ||||||| |||||||||||| ||||||||||||||||||||| ||||||||    
T  81316 aatagaaccctaattcac-atttcctatctcaagaacaatttatgttaaatcaattttcagaaattatatat 81246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 97 - 211
Target Start/End: Original strand, 2002 - 2115
Alignment:
Q  97 aaatcagtattagaaccctaattccccaattcctattt-caagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttag 195  Q
    |||||||||| ||||||||||||||| ||||  ||||| |||||||||||||| |||| ||||||||||||| ||||||| |||||||||||||||||||    
T  2002 aaatcagtat-agaaccctaattccc-aatttttattttcaagaacaattcatattaagtcaattttcagaaattatataatacaatcattgagagttag 2099  T
Q  196 tctcacccttacctta 211  Q
     |||| ||||||||||    
T  2100 cctcagccttacctta 2115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 107 - 211
Target Start/End: Original strand, 69698 - 69801
Alignment:
Q  107 tagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcaccctta 206  Q
    |||||||||||||||| |||   ||| ||||||||||||||||||||||   |||||| || ||||||||||  |||||||| |||||||||||||||||    
T  69698 tagaaccctaattccc-aatctttatctcaagaacaattcatgttaaattttttttcataaattatatattaagatcattgaaagttagtctcaccctta 69796  T
Q  207 cctta 211  Q
    |||||    
T  69797 cctta 69801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 4e-25; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 20805294 - 20805376
Alignment:
Q  129 ctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    |||| |||||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||| |||||||||||||||    
T  20805294 ctatctcaagaacaatttatgttaaatcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 20805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 180 - 248
Target Start/End: Complemental strand, 21180311 - 21180244
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  21180311 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctac-agaatctgattctcc 21180244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 18271345 - 18271412
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcctcc 251  Q
    |||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||    
T  18271345 attgagagttagtctcacccttaccttgaattgatgaacaaagctctacaaaaatctgattctcctcc 18271412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 134 - 211
Target Start/End: Original strand, 11158070 - 11158148
Alignment:
Q  134 tcaagaacaattcatgttaaat-caattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    |||||||||||||||||||||  |||||||||||| ||||||||||  |||||||||||||||||||||||||||||||    
T  11158070 tcaagaacaattcatgttaaaaacaattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 11158148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 18275999 - 18276066
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcctcc 251  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||| |||||||||||||||    
T  18275999 attgagagttagtctcacccttaccttgaattgatgaacaaagctctacaaatatctgattctcctcc 18276066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 110 - 211
Target Start/End: Complemental strand, 19663618 - 19663517
Alignment:
Q  110 aaccctaattccccaattcctatt-tcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacc 208  Q
    ||||||||||||| ||||  |||| ||||||||||||||||||||| |||||||||||| ||||||| ||  || || ||||| ||||||||||||||||    
T  19663618 aaccctaattccc-aatttttattctcaagaacaattcatgttaaaacaattttcagaaattatatactatgattatcgagagatagtctcacccttacc 19663520  T
Q  209 tta 211  Q
    |||    
T  19663519 tta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 250
Target Start/End: Original strand, 13227890 - 13227981
Alignment:
Q  162 tcagaagttatatatt--acaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctcctc 250  Q
    |||||||||||||| |  | ||| ||||||||||||||||||||||||||| ||| || ||||||| ||||||| |||||||||||||||||    
T  13227890 tcagaagttatataatctataattattgagagttagtctcacccttacctttgattgaagaacaaaactctacagaaaatctgattctcctc 13227981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 211
Target Start/End: Original strand, 16372852 - 16373009
Alignment:
Q  55 attctaagcataattaacatgtctcctaaa-cttttcaactcaaaatcagtattagaaccctaattccccaattcctattt--caagaacaattcatgtt 151  Q
    |||||||||||||||||||||  |||| |  ||||||  | |||||||||||| ||||||||||||||| ||||| |||||  ||||||||||||   |     
T  16372852 attctaagcataattaacatgaatccttactcttttcttc-caaaatcagtat-agaaccctaattcccaaattcttatttttcaagaacaattctaatc 16372949  T
Q  152 aaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    ||| ||||||||||||   |||||||| |||||||||  ||||| |||||||||||||||    
T  16372950 aaaacaattttcagaaaccatatattataatcattgaaggttagcctcacccttacctta 16373009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 20902157 - 20902221
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||| ||||||||||||||  || |||||||||||| ||||||||||| ||||||||    
T  20902157 attgagagttagcctcacccttaccttgaattgatgaacaaagcgctacaaaaatcagattctcc 20902221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 635022 - 634968
Alignment:
Q  193 tagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    ||||||||||||||||||||||||||||||||| |||||| | |||||||||||||    
T  635022 tagtctcacccttaccttagatcgatgaacaaaactctac-agaatctgattctcc 634968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 7791584 - 7791537
Alignment:
Q  186 tgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  7791584 tgagtgttagtctcacccttaccttagattgatgaacaaagctctaca 7791537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 8686049 - 8686114
Alignment:
Q  183 cattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    ||||||||||||||||||||||||||||   | ||||||||||||||| |||||||| | ||||||    
T  8686049 cattgagagttagtctcacccttaccttgatttgatgaacaaagctcttcaaaaatcagtttctcc 8686114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 28203784 - 28203731
Alignment:
Q  183 cattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaa 236  Q
    ||||||||||||| ||||||||||||||  || |||||||||||||||||||||    
T  28203784 cattgagagttagcctcacccttaccttgaattgatgaacaaagctctacaaaa 28203731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 18712775 - 18712854
Alignment:
Q  131 atttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    |||||||||||||||||  ||| |||||||||||||| ||||||| ||  || |||||||| ||||||||||| |||||||    
T  18712775 atttcaagaacaattcaa-ttagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 21660394 - 21660446
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaa 236  Q
    |||||||||||| ||||||||||||||  || |||||||||||||||||||||    
T  21660394 attgagagttagcctcacccttaccttgaattgatgaacaaagctctacaaaa 21660446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 21526814 - 21526747
Alignment:
Q  181 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||||| ||||||||||||||||  | ||||||||||||| | ||| |||| ||||||||    
T  21526814 atcattgagagttattctcacccttaccttaatttgatgaacaaagctttccaagaatcagattctcc 21526747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 32651549 - 32651627
Alignment:
Q  132 tttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    |||||||||||| |||  ||| |||||||||||||| ||||||| ||  || |||||||| |||||||||||||||||||    
T  32651549 tttcaagaacaactcaa-ttagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 32651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 13527735 - 13527678
Alignment:
Q  191 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    ||||| |||| |||||||||  || |||||||||||||||||||||||| ||||||||    
T  13527735 gttagcctcatccttaccttgaattgatgaacaaagctctacaaaaatcagattctcc 13527678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 20437080 - 20437024
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||||    
T  20437080 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 247
Target Start/End: Original strand, 297383 - 297449
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatc-gatgaacaaagctctacaaaaatctgattctc 247  Q
    ||||||||  |||||| |||||||||||||||  || |||||||||||||||||  |||||||||||||    
T  297383 aatcattgcaagttagcctcacccttaccttaattcagatgaacaaagctctac--aaatctgattctc 297449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 24476353 - 24476405
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaa 236  Q
    |||||||| |||||||||||||||||||  | |||||||||| |||| |||||    
T  24476353 attgagagatagtctcacccttaccttaatttgatgaacaaaactctccaaaa 24476405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 41112038 - 41112090
Alignment:
Q  160 tttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 212  Q
    |||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  41112038 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 41112090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 211
Target Start/End: Original strand, 52100 - 52304
Alignment:
Q  6 aattctgattacaacaatgttactaaatcctgaaaacgatctgaacatga-ttctaagcataattaacatgtctcctaaacttttcaactcaaaatcagt 104  Q
    ||||||||||||| |||| || ||| || |||||| | |||||||||||| ||||||||| | | ||||||  ||||| |||||||   |||||||| ||    
T  52100 aattctgattacagcaatatt-ctagattctgaaatcaatctgaacatgaattctaagcacattaaacatgattcctacacttttcctttcaaaatcggt 52198  T
Q  105 attagaaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcaccct 204  Q
    || ||||||||||||| | | ||    ||||||||||||||||  | ||||||||||||| || | |||||||| |||||||||  ||||| ||||||||    
T  52199 at-agaaccctaattctcgatttttattttcaagaacaattcaaatcaaatcaattttcataaatcatatattataatcattgaaggttagcctcaccct 52297  T
Q  205 tacctta 211  Q
    |||||||    
T  52298 tacctta 52304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 211
Target Start/End: Original strand, 1428 - 1504
Alignment:
Q  134 tcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    ||||||||||||||||||||| |||||| ||||| ||||| ||||  |||||||||||||||||||||||||||||||    
T  1428 tcaagaacaattcatgttaaaacaattt-cagaaattatacattaagatcattgagagttagtctcacccttacctta 1504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 180 - 248
Target Start/End: Original strand, 1159 - 1226
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||||||| |||||||||||||||||| ||| ||||||||||||| |||||||||||||||    
T  1159 aatcattgagagttagcctcacccttaccttagattgataaacaaagctctac-aaaatctgattctcc 1226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 180 - 248
Target Start/End: Original strand, 7978 - 8046
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||||||| ||||||||||||||  || |||||||||||||||||||||||| ||||||||    
T  7978 aatcattgagagttagcctcacccttaccttgaattgatgaacaaagctctacaaaaatcagattctcc 8046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 250
Target Start/End: Original strand, 3793 - 3884
Alignment:
Q  162 tcagaagttatatatt--acaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctcctc 250  Q
    |||||||||||||| |  | ||||||||||||||||||||||||||||||| ||| || ||||||| ||||||| |||||||||||||||||    
T  3793 tcagaagttatataatctataatcattgagagttagtctcacccttacctttgattgaagaacaaaactctacagaaaatctgattctcctc 3884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 110 - 210
Target Start/End: Complemental strand, 22693 - 22594
Alignment:
Q  110 aaccctaattccccaattcctatttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 209  Q
    ||||||||||||| ||||  ||| ||||||||||||||||||||| | |||||||||| ||||||| ||  || |||||||| |||||||||||||||||    
T  22693 aaccctaattccc-aatttttatctcaagaacaattcatgttaaaacgattttcagaaattatatactatgattattgagagatagtctcacccttacct 22595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 211
Target Start/End: Original strand, 22337461 - 22337578
Alignment:
Q  95 caaaatcagtattagaaccctaattccccaattcctattt--caagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagt 192  Q
    |||||||||||| ||||||||||||||| ||||| |||||  ||||||||||||   | ||| ||||||||||||   |||||||| |||||||||  ||    
T  22337461 caaaatcagtat-agaaccctaattcccaaattcttatttttcaagaacaattctaatcaaaacaattttcagaaaccatatattataatcattgaaggt 22337559  T
Q  193 tagtctcacccttacctta 211  Q
    |||||||||||||||||||    
T  22337560 tagtctcacccttacctta 22337578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 214
Target Start/End: Complemental strand, 22438824 - 22438745
Alignment:
Q  135 caagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttagat 214  Q
    |||||||||||||||||||  |||||||||||| ||||| ||||  || |||||||| ||||||||||||||||||||||    
T  22438824 caagaacaattcatgttaagacaattttcagaaattatacattatgattattgagagatagtctcacccttaccttagat 22438745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 247
Target Start/End: Original strand, 17813483 - 17813571
Alignment:
Q  162 tcagaagttatatatt--acaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctc 247  Q
    |||||||||||||| |  | ||||||||||||||||||||||||||||||| ||| || ||||||| ||||||| ||||||||||||||    
T  17813483 tcagaagttatataatctataatcattgagagttagtctcacccttacctttgattgaagaacaaaactctacagaaaatctgattctc 17813571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 33472584 - 33472528
Alignment:
Q  191 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  33472584 gttagtctcacccttaccttagatcgatgaacaaagctctac-agaatctgattctcc 33472528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 36461064 - 36461117
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  36461064 aatcattgagagttagcctcacccttaccttagattgatgaacaaagctctaca 36461117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 18408022 - 18407944
Alignment:
Q  132 tttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    ||||||||||||||||  ||| |||||||||||||| ||||||||||  || |||||||| |||||||||||||||||||    
T  18408022 tttcaagaacaattcaa-ttagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 95 - 211
Target Start/End: Original strand, 22340999 - 22341116
Alignment:
Q  95 caaaatcagtattagaaccctaattccccaattcctattt--caagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagt 192  Q
    |||||||||||| ||||||||||||||| ||||| |||||  ||||||||||||   | ||| ||||||||||||   |||||||| |||||||||  ||    
T  22340999 caaaatcagtat-agaaccctaattcccaaattcttatttttcaagaacaattctaatcaaaacaattttcagaaaccatatattataatcattgaaggt 22341097  T
Q  193 tagtctcacccttacctta 211  Q
    ||| |||||||||||||||    
T  22341098 tagcctcacccttacctta 22341116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 21980098 - 21980045
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    |||||||||||||| | |||||||||||||||||| ||||||||||||||||||    
T  21980098 aatcattgagagttggcctcacccttaccttagattgatgaacaaagctctaca 21980045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 22356931 - 22356882
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  22356931 attgagagttagcctcacccttaccttagattgatgaacaaagctctaca 22356882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 23111278 - 23111200
Alignment:
Q  132 tttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    ||||||||||||||||  ||| |||||||||||||| ||||||| ||  || |||||||| |||||||||||||||||||    
T  23111278 tttcaagaacaattcaa-ttagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 21663170 - 21663109
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattct 246  Q
    |||||||||||| |||||||||||||||||| |||||||||| |||||| | |||||||||||    
T  21663170 attgagagttagcctcacccttaccttagattgatgaacaaaactctac-agaatctgattct 21663109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 26707396 - 26707462
Alignment:
Q  183 cattgagagttagtctcacccttacctt-agatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||||||||||||||||||| |  | ||||||||||||||| |||||||| ||||||||    
T  26707396 cattgagagttagtctcacccttaccttgattttgatgaacaaagctctccaaaaatcagattctcc 26707462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 26977130 - 26977196
Alignment:
Q  183 cattgagagttagtctcacccttacctt-agatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||||||||||||||||||| |  | ||||||||||||||| |||||||| ||||||||    
T  26977130 cattgagagttagtctcacccttaccttgattttgatgaacaaagctctccaaaaatcagattctcc 26977196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 21553418 - 21553354
Alignment:
Q  183 cattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    ||||||||||||| |||||||||||||||||| |||||||||| |||||  | |||||||||||||    
T  21553418 cattgagagttagcctcacccttaccttagattgatgaacaaaactcta-tagaatctgattctcc 21553354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 247
Target Start/End: Complemental strand, 24276530 - 24276462
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctcta-caaaaatctgattctc 247  Q
    |||||||||||||||| |||||||||||||||||| ||||||  || ||||| ||||||| ||||||||    
T  24276530 aatcattgagagttagcctcacccttaccttagattgatgaatcaaactctaccaaaaatatgattctc 24276462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 247
Target Start/End: Original strand, 24385683 - 24385751
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctcta-caaaaatctgattctc 247  Q
    |||||||||||||||| |||||||||||||||||| ||||||  || ||||| ||||||| ||||||||    
T  24385683 aatcattgagagttagcctcacccttaccttagattgatgaatcaaactctaccaaaaatatgattctc 24385751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 38144593 - 38144536
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 212  Q
    ||||||||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  38144593 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 38144536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 42961444 - 42961622
Alignment:
Q  33 tcctgaaaacgatctgaacatga-ttctaagcataattaacatgtctcctaaa-cttttcaactcaaaatcagtattagaaccctaattccccaattcct 130  Q
    |||| ||| ||||||||| |||| ||||||||||||||||||||  |||| |  ||||||  |  ||||||||||| |||||||||||| || ||||| |    
T  42961444 tcctaaaatcgatctgaatatgaattctaagcataattaacatgaatccttactcttttctcc--aaaatcagtat-agaaccctaatttcc-aattctt 42961539  T
Q  131 attt--caagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 212  Q
    ||||  | ||||||||||   | ||| |||||||||||| | |||||||| |||||||||  ||||| ||||||||||||||||    
T  42961540 atttttctagaacaattctaatcaaa-caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttag 42961622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 7786200 - 7786268
Alignment:
Q  181 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctc-tacaaaaatctgattctcc 248  Q
    ||||||||||||||||||||||||||||||   | |||||||||| ||| | |||||||| ||||||||    
T  7786200 atcattgagagttagtctcacccttaccttgatttgatgaacaaaactcttccaaaaatcagattctcc 7786268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 19512385 - 19512441
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||||    
T  19512385 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 28370111 - 28370055
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||||    
T  28370111 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 211
Target Start/End: Original strand, 6766779 - 6766810
Alignment:
Q  180 aatcattgagagttagtctcacccttacctta 211  Q
    ||||||||||||||||||||||||||||||||    
T  6766779 aatcattgagagttagtctcacccttacctta 6766810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 43122047 - 43122109
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctga 242  Q
    ||||||||  |||||| |||||||||||||||||| |||||| || |||  ||||||||||||    
T  43122047 aatcattgcaagttagcctcacccttaccttagattgatgaataatgcttaacaaaaatctga 43122109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 43125580 - 43125642
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctga 242  Q
    ||||||||  |||||| |||||||||||||||||| |||||| || |||  ||||||||||||    
T  43125580 aatcattgcaagttagcctcacccttaccttagattgatgaataatgcttaacaaaaatctga 43125642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 17021941 - 17021877
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctc 247  Q
    |||||||| |||||||||||||||||||||| || | ||| | ||||||| |||||||| |||||    
T  17021941 attgagagatagtctcacccttaccttagattgaaggacagaactctacagaaaatctggttctc 17021877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 23528634 - 23528686
Alignment:
Q  160 tttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 212  Q
    |||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  23528634 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 23528686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 180 - 250
Target Start/End: Complemental strand, 15015 - 14946
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcctc 250  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||||||||||| |||||| ||||||||||    
T  15015 aatcattgagagttagcctcacgcttaccttagattgatgaacaaagctctac-aaaatcagattctcctc 14946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 250
Target Start/End: Complemental strand, 15132 - 15067
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcctc 250  Q
    |||||||||||| ||||| ||||||||| || ||||||||||||||||| |||||| ||||||||||    
T  15132 attgagagttagcctcacgcttaccttaaattgatgaacaaagctctac-aaaatcagattctcctc 15067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 33958 - 33893
Alignment:
Q  183 cattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    ||||||||||||| ||||||||||||||  || |||||||||||||||||||||||| ||||||||    
T  33958 cattgagagttagcctcacccttaccttgaattgatgaacaaagctctacaaaaatcagattctcc 33893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 176824 - 176880
Alignment:
Q  191 gttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  176824 gttagtctcacccttaccttagatcgatgaacaaagctctac-agaatctgattctcc 176880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 152129 - 152089
Alignment:
Q  193 tagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  152129 tagtcccacccttaccttagattgatgaacaaagctctaca 152089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 250
Target Start/End: Original strand, 68988 - 69079
Alignment:
Q  162 tcagaagttatatatt--acaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctcctc 250  Q
    |||||||||||||| |  | ||| ||||||||||||||||||||||||||| ||| || ||||||| ||||||| |||||||||||||||||    
T  68988 tcagaagttatataatctataattattgagagttagtctcacccttacctttgattgaagaacaaaactctacagaaaatctgattctcctc 69079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 182078 - 182010
Alignment:
Q  181 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctcc 248  Q
    ||||||||||||||||||||||||||||||  || |||||||||||||||||| |||||| ||||||||    
T  182078 atcattgagagttagtctcacccttaccttgaattgatgaacaaagctctacagaaaatcagattctcc 182010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 172127 - 172087
Alignment:
Q  193 tagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    ||||| |||||||||||||||| | ||||||||||||||||    
T  172127 tagtcccacccttaccttagattggtgaacaaagctctaca 172087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 1092 - 1143
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctcta 231  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  1092 aatcattgagagttagcctcacccttaccttagattgatgaacaaagctcta 1143  T

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Target: scaffold0481 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 705 - 634
Alignment:
Q  181 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctcctcc 251  Q
    |||||||||||||||||||||||||||||| ||| || ||||||| ||||||| ||||||||||||| ||||    
T  705 atcattgagagttagtctcacccttacctttgattgaagaacaaaactctacagaaaatctgattcttctcc 634  T

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Target: scaffold0037 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 211
Target Start/End: Complemental strand, 71548 - 71343
Alignment:
Q  6 aattctgattacaacaatgttactaaatcctgaaaacgatctgaacatga-ttctaagcataattaacatgtctcctaaa-cttttcaactcaaaatcag 103  Q
    ||||| ||||||||||| |||| ||| |||| ||| ||||||||| |||| ||||||||||||||||||||  |||| |  ||||||  | |||||||||    
T  71548 aattcggattacaacaacgtta-taattcctaaaatcgatctgaatatgaattctaagcataattaacatgaatccttactcttttcttc-caaaatcag 71451  T
Q  104 tattagaaccctaattccccaattcctattt--caagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcac 201  Q
    ||| ||||||||||||||| ||||| |||||  ||||||||||||   | ||| ||||||| |||| | |||| ||| |||||||||  ||||| ||||     
T  71450 tat-agaaccctaattccc-aattcttatttttcaagaacaattcgaatcaaaacaatttttagaaatcatatgttataatcattgaaggttagcctcat 71353  T
Q  202 ccttacctta 211  Q
    ||||||||||    
T  71352 ccttacctta 71343  T

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Target: scaffold0232 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18639 - 18578
Alignment:
Q  1 ttcccaattctgattacaacaatgttactaaatcctgaaaacgatctgaacatgattctaag 62  Q
    |||||||||||||||||| ||||||||| ||||||| ||||| || ||||||||||||||||    
T  18639 ttcccaattctgattacatcaatgttaccaaatcctaaaaaccatatgaacatgattctaag 18578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 247
Target Start/End: Complemental strand, 11460 - 11372
Alignment:
Q  162 tcagaagttatatatt--acaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctcta-caaaaatctgattctc 247  Q
    |||||||||||||| |  | |||||||||||||||||||||||||||||||  || ||||||| || ||||| ||||||||||||||||    
T  11460 tcagaagttatataatctaaaatcattgagagttagtctcacccttaccttgaattgatgaaccaaactctaccaaaaatctgattctc 11372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 7873 - 7937
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||| ||||||||||| ||  || |||||||||||||||||||||||| ||||||||    
T  7873 attgagagttagcctcacccttacattgaattgatgaacaaagctctacaaaaatcagattctcc 7937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 12487 - 12551
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||| ||||||||||| ||  || |||||||||||||||||||||||| ||||||||    
T  12487 attgagagttagcctcacccttacattgaattgatgaacaaagctctacaaaaatcagattctcc 12551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 10482 - 10546
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||| ||||||||||| ||  || |||||||||||||||||||||||| ||||||||    
T  10482 attgagagttagcctcacccttacattgaattgatgaacaaagctctacaaaaatcagattctcc 10546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 2140 - 2203
Alignment:
Q  182 tcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattct 246  Q
    |||||||||| ||| |||||||||||||||||| ||||||||||||||||| | |||||||||||    
T  2140 tcattgagagctagcctcacccttaccttagattgatgaacaaagctctac-agaatctgattct 2203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 17625 - 17701
Alignment:
Q  138 gaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttagat 214  Q
    ||||||||||||||||  |||||||||||| ||||| ||||   | |||||||| ||||||||||||||||||||||    
T  17625 gaacaattcatgttaagacaattttcagaaattatacattatggttattgagagatagtctcacccttaccttagat 17701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 250
Target Start/End: Original strand, 21848 - 21939
Alignment:
Q  162 tcagaagttatatattaca--atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctcctc 250  Q
    |||||||||||||| || |  || ||||||||||||||||||||||||||| ||| || ||||||| ||||||| ||||||| |||||||||    
T  21848 tcagaagttatataatatataattattgagagttagtctcacccttacctttgattgaagaacaaaactctacagaaaatcttattctcctc 21939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 250
Target Start/End: Original strand, 34521 - 34592
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctcta-caaaaatctgattctcctc 250  Q
    |||||||||||||||| ||||||||||||||||||  |||||  || ||||| |||||||||||||||||||    
T  34521 aatcattgagagttagcctcacccttaccttagattaatgaatcaaactctaccaaaaatctgattctcctc 34592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 250
Target Start/End: Complemental strand, 7497 - 7430
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctcctc 250  Q
    ||||||||||||||||||||||||||| ||| || ||||||| |||||||  ||||||||||||||||    
T  7497 attgagagttagtctcacccttacctttgattgaagaacaaaactctacaggaaatctgattctcctc 7430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 86 - 8
Alignment:
Q  132 tttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    ||||||||||||||||  ||| |||||||||||||| |||| |||||  || |||||||| |||||||||||||||||||    
T  86 tttcaagaacaattcaa-ttagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 211
Target Start/End: Complemental strand, 8887 - 8770
Alignment:
Q  95 caaaatcagtattagaaccctaattccccaattcctattt--caagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagt 192  Q
    |||||||||||| ||||||||||||| | ||||| |||||  ||||||||||||   | ||| ||||||||||||   |||||||| |||||||||  ||    
T  8887 caaaatcagtat-agaaccctaattctcaaattcttatttttcaagaacaattctaatcaaaacaattttcagaaaccatatattataatcattgaaggt 8789  T
Q  193 tagtctcacccttacctta 211  Q
    ||| |||||||||||||||    
T  8788 tagcctcacccttacctta 8770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 16797 - 16875
Alignment:
Q  132 tttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    ||||||||||||||||  ||| |||||||||||||| ||||||| ||  || |||||||| |||||||||||||||||||    
T  16797 tttcaagaacaattcaa-ttagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 13609 - 13687
Alignment:
Q  132 tttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    ||||||||||||||||  ||| |||||||||||||| |||| |||||  || |||||||| |||||||||||||||||||    
T  13609 tttcaagaacaattcaa-ttagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 13687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 31478 - 31411
Alignment:
Q  181 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    ||||||||||||||||||||||||||||||   | |||||||||| |||| |||||||| ||||||||    
T  31478 atcattgagagttagtctcacccttaccttgatttgatgaacaaaactctccaaaaatcagattctcc 31411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 18168 - 18225
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 212  Q
    |||||||||| || ||||| ||||  || |||||||| ||||||||||||||||||||    
T  18168 tcaattttcaaaaattatagattatgattattgagagatagtctcacccttaccttag 18225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 221
Target Start/End: Original strand, 51985 - 52062
Alignment:
Q  145 tcatgttaaatcaattttcagaagttatatatt--acaatcattgagagttagtctcacccttaccttagatcgatgaa 221  Q
    ||||||||||||||  | ||||||||||||| |  | ||||||||||||||||||||||||||||||||||| ||||||    
T  51985 tcatgttaaatcaaaat-cagaagttatataatctataatcattgagagttagtctcacccttaccttagattgatgaa 52062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 643 - 582
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattct 246  Q
    |||||||||||| |||||||||||||||||| |||||||||| |||||| | |||||||||||    
T  643 attgagagttagcctcacccttaccttagattgatgaacaaaactctac-agaatctgattct 582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 11659 - 11720
Alignment:
Q  162 tcagaagttatatatt--acaatcattgagagttagtctcacccttaccttagatcgatgaa 221  Q
    |||||||||||||| |  | ||||||||||||||||||||||||||||||||||| ||||||    
T  11659 tcagaagttatataatctaaaatcattgagagttagtctcacccttaccttagattgatgaa 11720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 25548 - 25487
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattct 246  Q
    |||||||||||| |||||||||||||||||| |||||||||| |||||| | |||||||||||    
T  25548 attgagagttagcctcacccttaccttagattgatgaacaaaactctac-agaatctgattct 25487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 3694 - 3641
Alignment:
Q  194 agtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||||||||||||||||||| |||||||||| | |||||||||||||    
T  3694 agtctcacccttaccttagatcgatgaagaaagctctac-agaatctgattctcc 3641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 11654 - 11603
Alignment:
Q  194 agtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattct 246  Q
    |||||||||||||||||||||||||||| ||| |||||| | |||||||||||    
T  11654 agtctcacccttaccttagatcgatgaataaatctctac-agaatctgattct 11603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0696 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0696
Description:

Target: scaffold0696; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 3354 - 3419
Alignment:
Q  183 cattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    ||||||||||||||||||||||||||||   | ||||||||||||||| |||||||| | ||||||    
T  3354 cattgagagttagtctcacccttaccttgatttgatgaacaaagctcttcaaaaatcagtttctcc 3419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 52228 - 52292
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||| ||||| ||||||||  || |||||||||||||| ||||||||| ||||||||    
T  52228 attgagagttagcctcactcttaccttgaattgatgaacaaagctcaacaaaaatcagattctcc 52292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 250
Target Start/End: Original strand, 67704 - 67790
Alignment:
Q  162 tcagaagttatatatt--acaatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca-aaaatctgattctcctc 250  Q
    |||||||||||||| |  | ||||||||||||||||||||||||||      ||| || ||||||| ||||||| |||||||||||||||||    
T  67704 tcagaagttatataatctataatcattgagagttagtctcacccttt-----gattgaagaacaaaactctacagaaaatctgattctcctc 67790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 30007 - 30054
Alignment:
Q  186 tgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    |||| |||||||||||||||||| ||||| ||||||||||||||||||    
T  30007 tgagtgttagtctcacccttaccatagattgatgaacaaagctctaca 30054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 35472 - 35519
Alignment:
Q  186 tgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    |||| |||||||||||||||||| ||||| ||||||||||||||||||    
T  35472 tgagtgttagtctcacccttaccatagattgatgaacaaagctctaca 35519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 102006 - 101928
Alignment:
Q  132 tttcaagaacaattcatgttaaatcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    ||||||||||||||||  ||| |||||||||||| | ||||||| ||  || |||||||| |||||||||||||||||||    
T  102006 tttcaagaacaattcaa-ttagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 236
Target Start/End: Original strand, 602 - 678
Alignment:
Q  162 tcagaagttatata--ttacaatcattgagagttagtctcacccttaccttagatcgatgaa-caaagctctacaaaa 236  Q
    ||||||||||||||  ||| ||| |||||||||||||||||||||||||||| ||  ||||| |||||||||||||||    
T  602 tcagaagttatataatttataattattgagagttagtctcacccttacctta-atttatgaatcaaagctctacaaaa 678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 111684 - 111742
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 213  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||||||    
T  111684 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 111742  T

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Target: scaffold0026; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 11907 - 11850
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 212  Q
    ||||||||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  11907 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 11850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 807 - 750
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 212  Q
    ||||||||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  807 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 11340 - 11397
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 212  Q
    ||||||||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  11340 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 11397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 18873 - 18922
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    ||||| |||||| |||||||||||||| ||| ||||||||||||||||||    
T  18873 attgaaagttagcctcacccttacctttgattgatgaacaaagctctaca 18922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 30856 - 30913
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 212  Q
    ||||||||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  30856 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 30913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1555 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1555
Description:

Target: scaffold1555; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 248
Target Start/End: Original strand, 208 - 251
Alignment:
Q  204 ttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    ||||||||||||||||||||||||||||| | |||||||||||||    
T  208 ttaccttagatcgatgaacaaagctctac-agaatctgattctcc 251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 5912 - 5856
Alignment:
Q  157 aattttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 213  Q
    ||||||||||| |||||||||| ||||||||| || || || |||||||||||||||    
T  5912 aattttcagaaattatatattataatcattgaaagataatcccacccttaccttaga 5856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 10738 - 10675
Alignment:
Q  184 attgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctgattctcc 248  Q
    |||||||||||| ||||||||||||||  || ||||||| ||||||||| |||||| ||||||||    
T  10738 attgagagttagcctcacccttaccttgaattgatgaac-aagctctacgaaaatcagattctcc 10675  T

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Target: scaffold0480 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 1490 - 1545
Alignment:
Q  181 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaa 237  Q
    ||||||||||| ||||||||||||||||||| || || |||||||||||||| ||||    
T  1490 atcattgagagatagtctcacccttacctta-attgaagaacaaagctctaccaaaa 1545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 10916 - 10876
Alignment:
Q  193 tagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  10916 tagtcccacccttaccttagattgatgaacaaagctctaca 10876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 2896 - 2845
Alignment:
Q  162 tcagaagttatatatt--acaatcattgagagttagtctcacccttacctta 211  Q
    |||||||||||||| |  | ||||||||||||||||||||||||||||||||    
T  2896 tcagaagttatataatctaaaatcattgagagttagtctcacccttacctta 2845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 11340 - 11300
Alignment:
Q  193 tagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  11340 tagtcccacccttaccttagattgatgaacaaagctctaca 11300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 15740 - 15700
Alignment:
Q  193 tagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  15740 tagtcccacccttaccttagattgatgaacaaagctctaca 15700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 106021 - 106053
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttag 212  Q
    |||||||||||||||||||||||||||||||||    
T  106021 aatcattgagagttagtctcacccttaccttag 106053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 189750 - 189805
Alignment:
Q  181 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaa 236  Q
    ||||||||||||| ||||||||||||||||   | ||||||||||||| |||||||    
T  189750 atcattgagagttggtctcacccttaccttgatttgatgaacaaagctatacaaaa 189805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 10252 - 10194
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 213  Q
    ||||||||||||| ||||| ||||  || |||||||| ||||| |||||||||||||||    
T  10252 tcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttaga 10194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 1582 - 1524
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 213  Q
    ||||||||||||| ||||| ||||  || |||||||| ||||| |||||||||||||||    
T  1582 tcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttaga 1524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 8544 - 8578
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagat 214  Q
    |||||||||||||||| ||||||||||||||||||    
T  8544 aatcattgagagttagcctcacccttaccttagat 8578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 13947 - 13893
Alignment:
Q  159 ttttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 213  Q
    ||||||||| |||||||||| ||||||||| || || || |||||||||||||||    
T  13947 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttaga 13893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 34031 - 34093
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctga 242  Q
    ||||||||  |||||| |||||||||||||||||| |||||| || |||  ||||||||||||    
T  34031 aatcattgcaagttagcctcacccttaccttagattgatgaataatgcttaacaaaaatctga 34093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 233
Target Start/End: Original strand, 25185 - 25219
Alignment:
Q  199 cacccttaccttagatcgatgaacaaagctctaca 233  Q
    |||||||||||||||| ||||||||||||||||||    
T  25185 cacccttaccttagattgatgaacaaagctctaca 25219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 233
Target Start/End: Original strand, 36055 - 36089
Alignment:
Q  199 cacccttaccttagatcgatgaacaaagctctaca 233  Q
    |||||||||||||||| ||||||||||||||||||    
T  36055 cacccttaccttagattgatgaacaaagctctaca 36089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 80781 - 80719
Alignment:
Q  180 aatcattgagagttagtctcacccttaccttagatcgatgaacaaagctctacaaaaatctga 242  Q
    ||||||||  |||||| |||||||||||||||||| |||||| || |||  ||||||||||||    
T  80781 aatcattgcaagttagcctcacccttaccttagattgatgaataatgcttaacaaaaatctga 80719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 14452 - 14398
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 209  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||    
T  14452 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 214
Target Start/End: Original strand, 3768 - 3801
Alignment:
Q  181 atcattgagagttagtctcacccttaccttagat 214  Q
    ||||||||||||||| ||||||||||||||||||    
T  3768 atcattgagagttagcctcacccttaccttagat 3801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 930 - 987
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 212  Q
    |||||||||||||  |||| ||||  || |||||||| ||||||||||||||||||||    
T  930 tcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 8075 - 8132
Alignment:
Q  155 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 212  Q
    |||||||||||||  |||| ||||  || |||||||| ||||||||||||||||||||    
T  8075 tcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 8132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 1384 - 1441
Alignment:
Q  154 atcaattttcagaagttatatattacaatcattgagagttagtctcacccttacctta 211  Q
    ||||||||||| || |||||||| |  |||||||| || |||||||||||||||||||    
T  1384 atcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 1441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 111885 - 111938
Alignment:
Q  159 ttttcagaagttatatattacaatcattgagagttagtctcacccttaccttag 212  Q
    ||||||||| ||||| ||||  || |||||||| ||||||||||||||||||||    
T  111885 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 111938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 3457 - 3401
Alignment:
Q  157 aattttcagaagttatatattacaatcattgagagttagtctcacccttaccttaga 213  Q
    ||||||||||| |||||||||| | ||||||| || || | ||||||||||||||||    
T  3457 aattttcagaaattatatattaaattcattgaaagataatatcacccttaccttaga 3401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 11630 - 11681
Alignment:
Q  162 tcagaagttatata--ttacaatcattgagagttagtctcacccttacctta 211  Q
    |||||| |||||||  ||| ||| ||||||||||||||||||||||||||||    
T  11630 tcagaaattatataatttataattattgagagttagtctcacccttacctta 11681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 209894 - 209934
Alignment:
Q  193 tagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    ||||| ||||||||||||| || ||||||||||||||||||    
T  209894 tagtcccacccttaccttacattgatgaacaaagctctaca 209934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 20831 - 20779
Alignment:
Q  181 atcattgagagttagtctcacccttaccttagatcgatgaacaaagctctaca 233  Q
    ||||||||||||||  |||||||||||||||||| || | ||||| |||||||    
T  20831 atcattgagagttaacctcacccttaccttagattgaaggacaaaactctaca 20779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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