View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1185_high_31 (Length: 243)
Name: NF1185_high_31
Description: NF1185
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1185_high_31 |
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Alignment Details
Target: chr8 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 30240252 - 30240031
Alignment:
| Q |
1 |
tcttgagtttgacaacccaagatctagataggtatagataagcatatcatgtgaaaaatgtacattatactactttattactacctagagacttttaact |
100 |
Q |
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|||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30240252 |
tcttgagtttgataacccaagatgtagataggtatagataagcatatcatgtgaaaaatgtacattatactactttattactacctagagacttttaact |
30240153 |
T |
|
| Q |
101 |
actatttttgcaaagaaatatgcaatgtgacaaatggatgcaaaaacgtgtttcannnnnnnnnnnncattcactaccactgaatgattataagtggaag |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |
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| T |
30240152 |
actatttttgcaaagaaatatgcaatgtgacaaatggatgcaaaaacgtgtttcatttttatttttccattcactaccactgaatgatta-aagtggaag |
30240054 |
T |
|
| Q |
201 |
ataaagttctaatataacttact |
223 |
Q |
| |
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||||||||||| ||||||||||| |
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| T |
30240053 |
ataaagttctagtataacttact |
30240031 |
T |
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