View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1185_low_65 (Length: 215)
Name: NF1185_low_65
Description: NF1185
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1185_low_65 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 25889971 - 25889844
Alignment:
| Q |
1 |
ttttagctccctcagtttccatggcatcgtagtgctccttgggattatctttcgtattaacattgaagggttttgtctggttgacatcaagttgcttgga |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
25889971 |
ttttagctccctcagtttccatggcatcgtagtgctccttgggattatctttcgtattaacattgaagggttttgtctggttggcatcaagttgcttgga |
25889872 |
T |
|
| Q |
101 |
gatttgtccgatttgaacttctaaacct |
128 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
25889871 |
gatttgtccgatttgaacttctaaacct |
25889844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University