View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1185_low_66 (Length: 211)
Name: NF1185_low_66
Description: NF1185
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1185_low_66 |
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Alignment Details
Target: chr8 (Bit Score: 111; Significance: 3e-56; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 29878508 - 29878637
Alignment:
| Q |
1 |
accaattttctgcatacaagaaaatcccaatttcaatcattacaactacaacaattgtttgaacaaacatattcatgaggttattccttttcactttcca |
100 |
Q |
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| T |
29878508 |
accaattttctgcatacaagaaaatcccaatttcaatcattacaactacaacaattgtttgaacaaacataattatgaggttattccttttcac-ttcca |
29878606 |
T |
|
| Q |
101 |
atttatttgtttaccttaggctatgtttcat |
131 |
Q |
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|||| |||||||||||||||||||||||||| |
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| T |
29878607 |
atttttttgtttaccttaggctatgtttcat |
29878637 |
T |
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