View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11860_low_20 (Length: 269)

Name: NF11860_low_20
Description: NF11860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11860_low_20
NF11860_low_20
[»] chr4 (41 HSPs)
chr4 (1-269)||(55669775-55670044)
chr4 (172-269)||(35808372-35808469)
chr4 (171-269)||(41956188-41956286)
chr4 (172-269)||(26040336-26040433)
chr4 (173-269)||(27839283-27839379)
chr4 (173-269)||(2362667-2362763)
chr4 (173-269)||(23765614-23765710)
chr4 (173-269)||(34016661-34016757)
chr4 (169-262)||(51290473-51290566)
chr4 (172-269)||(31754974-31755071)
chr4 (173-269)||(19876160-19876256)
chr4 (176-269)||(30475461-30475554)
chr4 (173-269)||(20811299-20811395)
chr4 (173-269)||(31168170-31168266)
chr4 (173-269)||(32131178-32131274)
chr4 (177-269)||(45688779-45688871)
chr4 (173-269)||(51266960-51267056)
chr4 (171-269)||(34316697-34316796)
chr4 (174-269)||(50514592-50514686)
chr4 (174-269)||(54339149-54339243)
chr4 (175-269)||(31487757-31487851)
chr4 (173-269)||(26831763-26831859)
chr4 (201-269)||(33951736-33951804)
chr4 (172-260)||(46695938-46696026)
chr4 (172-269)||(10100089-10100186)
chr4 (218-269)||(19328950-19329001)
chr4 (175-269)||(9693361-9693454)
chr4 (176-269)||(40436117-40436210)
chr4 (189-269)||(35675183-35675263)
chr4 (177-227)||(16559975-16560025)
chr4 (173-226)||(19328724-19328777)
chr4 (224-269)||(45088103-45088148)
chr4 (181-242)||(53566935-53566996)
chr4 (221-269)||(3769849-3769897)
chr4 (189-269)||(30617985-30618065)
chr4 (226-266)||(47188695-47188735)
chr4 (218-269)||(35511202-35511253)
chr4 (177-227)||(54400286-54400336)
chr4 (212-269)||(52341637-52341694)
chr4 (189-269)||(29722074-29722154)
chr4 (213-269)||(51018396-51018452)
[»] chr1 (44 HSPs)
chr1 (172-269)||(34874603-34874700)
chr1 (171-269)||(41147450-41147548)
chr1 (173-269)||(27209695-27209791)
chr1 (172-269)||(49508707-49508803)
chr1 (173-269)||(2125681-2125777)
chr1 (169-269)||(11385780-11385880)
chr1 (173-269)||(28850884-28850980)
chr1 (173-269)||(42607298-42607394)
chr1 (172-269)||(4940713-4940810)
chr1 (172-269)||(22346210-22346307)
chr1 (173-269)||(43433811-43433907)
chr1 (172-269)||(7190448-7190545)
chr1 (172-269)||(47655344-47655441)
chr1 (177-269)||(40845287-40845379)
chr1 (172-269)||(11386017-11386114)
chr1 (172-269)||(29966859-29966956)
chr1 (172-269)||(32213862-32213959)
chr1 (193-269)||(932151-932227)
chr1 (173-269)||(24140809-24140904)
chr1 (170-269)||(50295404-50295503)
chr1 (172-269)||(45721788-45721884)
chr1 (194-269)||(49901962-49902037)
chr1 (172-269)||(5945456-5945553)
chr1 (172-269)||(26469555-26469652)
chr1 (172-269)||(33930002-33930099)
chr1 (173-269)||(6170525-6170621)
chr1 (173-269)||(31975523-31975619)
chr1 (175-269)||(8244128-8244219)
chr1 (177-269)||(52396479-52396571)
chr1 (172-269)||(28277454-28277552)
chr1 (173-269)||(44286908-44287004)
chr1 (174-269)||(4656052-4656147)
chr1 (171-269)||(16691330-16691428)
chr1 (172-269)||(50154509-50154606)
chr1 (189-269)||(14331873-14331953)
chr1 (176-253)||(37275238-37275315)
chr1 (175-205)||(8772511-8772541)
chr1 (177-210)||(26060288-26060321)
chr1 (174-231)||(30222993-30223050)
chr1 (197-269)||(17402984-17403056)
chr1 (177-209)||(38680885-38680917)
chr1 (189-261)||(41492953-41493024)
chr1 (189-269)||(43168177-43168257)
chr1 (189-269)||(44359662-44359742)
[»] chr8 (26 HSPs)
chr8 (169-269)||(19389283-19389383)
chr8 (174-269)||(45338040-45338135)
chr8 (172-269)||(4989969-4990066)
chr8 (171-269)||(21016270-21016368)
chr8 (172-269)||(21016033-21016130)
chr8 (173-269)||(5129433-5129529)
chr8 (171-269)||(35930172-35930270)
chr8 (172-269)||(6939194-6939291)
chr8 (172-269)||(26672826-26672922)
chr8 (205-269)||(18068998-18069062)
chr8 (200-269)||(8018797-8018866)
chr8 (200-269)||(25249345-25249414)
chr8 (177-269)||(26195354-26195446)
chr8 (172-269)||(3174496-3174591)
chr8 (199-269)||(44874361-44874431)
chr8 (172-269)||(10694843-10694940)
chr8 (197-262)||(7532828-7532893)
chr8 (172-269)||(37433301-37433397)
chr8 (171-250)||(19976465-19976545)
chr8 (172-216)||(18808956-18809000)
chr8 (207-269)||(26892822-26892884)
chr8 (172-205)||(22488765-22488798)
chr8 (169-269)||(14855357-14855457)
chr8 (169-266)||(34713892-34713991)
chr8 (218-269)||(6433580-6433631)
chr8 (176-269)||(34421298-34421391)
[»] chr2 (35 HSPs)
chr2 (172-269)||(765126-765223)
chr2 (172-269)||(39401511-39401607)
chr2 (169-269)||(27495159-27495259)
chr2 (170-265)||(1321208-1321303)
chr2 (175-269)||(862625-862719)
chr2 (173-269)||(6999238-6999334)
chr2 (170-269)||(2966576-2966675)
chr2 (177-267)||(16361604-16361694)
chr2 (181-269)||(17603847-17603935)
chr2 (187-267)||(33726418-33726498)
chr2 (177-269)||(39085773-39085865)
chr2 (174-269)||(13997882-13997977)
chr2 (171-269)||(17056033-17056130)
chr2 (171-269)||(17068480-17068577)
chr2 (171-269)||(17074463-17074560)
chr2 (181-269)||(35445275-35445363)
chr2 (172-269)||(33864391-33864488)
chr2 (173-269)||(44299658-44299754)
chr2 (171-269)||(17095042-17095139)
chr2 (172-269)||(44173155-44173252)
chr2 (51-132)||(9215041-9215122)
chr2 (200-269)||(17118377-17118446)
chr2 (172-269)||(41436514-41436611)
chr2 (218-269)||(11445313-11445364)
chr2 (171-269)||(23685638-23685725)
chr2 (201-269)||(43140328-43140396)
chr2 (174-269)||(464831-464927)
chr2 (186-269)||(9201485-9201568)
chr2 (177-243)||(9991421-9991487)
chr2 (200-269)||(2239618-2239687)
chr2 (173-216)||(4023355-4023398)
chr2 (202-269)||(34334167-34334234)
chr2 (219-269)||(37230256-37230306)
chr2 (176-205)||(8033381-8033410)
chr2 (189-269)||(11659298-11659378)
[»] chr5 (31 HSPs)
chr5 (177-269)||(35653236-35653328)
chr5 (174-269)||(4421942-4422037)
chr5 (174-269)||(39567939-39568034)
chr5 (177-266)||(15915871-15915960)
chr5 (168-269)||(28143095-28143196)
chr5 (172-269)||(43414040-43414137)
chr5 (172-259)||(16315510-16315597)
chr5 (172-269)||(5151525-5151622)
chr5 (173-269)||(35945282-35945378)
chr5 (174-269)||(8410178-8410273)
chr5 (188-269)||(25017283-25017364)
chr5 (173-269)||(4962494-4962589)
chr5 (199-269)||(27823295-27823365)
chr5 (171-269)||(37243883-37243980)
chr5 (172-269)||(1479112-1479209)
chr5 (172-269)||(34546814-34546911)
chr5 (171-269)||(338739-338837)
chr5 (172-269)||(3639051-3639148)
chr5 (193-269)||(1759853-1759929)
chr5 (173-269)||(12068151-12068247)
chr5 (169-269)||(40099368-40099467)
chr5 (172-269)||(25568267-25568365)
chr5 (171-243)||(104904-104976)
chr5 (219-269)||(12914211-12914261)
chr5 (218-262)||(13951258-13951302)
chr5 (198-269)||(17168712-17168783)
chr5 (174-259)||(10017600-10017684)
chr5 (189-269)||(10406823-10406903)
chr5 (173-205)||(7736271-7736303)
chr5 (233-269)||(28599691-28599727)
chr5 (225-269)||(39693046-39693090)
[»] chr7 (32 HSPs)
chr7 (174-269)||(40763285-40763380)
chr7 (171-269)||(29034723-29034821)
chr7 (172-269)||(43567482-43567579)
chr7 (173-269)||(48454799-48454895)
chr7 (172-269)||(36279155-36279252)
chr7 (174-269)||(5240310-5240405)
chr7 (171-269)||(5347947-5348045)
chr7 (175-269)||(8380477-8380571)
chr7 (171-269)||(24359683-24359781)
chr7 (167-269)||(30538451-30538553)
chr7 (174-269)||(1910280-1910374)
chr7 (171-269)||(27053468-27053566)
chr7 (173-261)||(8292789-8292877)
chr7 (173-269)||(22707085-22707180)
chr7 (173-269)||(7322930-7323026)
chr7 (177-269)||(43958064-43958156)
chr7 (194-269)||(40066915-40066990)
chr7 (173-269)||(42222257-42222353)
chr7 (174-269)||(8258621-8258711)
chr7 (172-269)||(46478535-46478628)
chr7 (195-269)||(41188785-41188859)
chr7 (202-269)||(3681730-3681797)
chr7 (194-269)||(49069591-49069666)
chr7 (197-266)||(22521625-22521694)
chr7 (213-269)||(3720131-3720187)
chr7 (233-269)||(30388697-30388733)
chr7 (213-269)||(40774259-40774315)
chr7 (218-269)||(32204218-32204269)
chr7 (218-269)||(46042784-46042834)
chr7 (213-267)||(31360309-31360363)
chr7 (177-227)||(44207714-44207764)
chr7 (177-209)||(675090-675122)
[»] chr3 (32 HSPs)
chr3 (172-269)||(29915551-29915648)
chr3 (172-269)||(29964704-29964801)
chr3 (173-269)||(8715479-8715574)
chr3 (173-269)||(9067366-9067461)
chr3 (169-269)||(36730126-36730226)
chr3 (173-269)||(4759827-4759923)
chr3 (173-269)||(44570363-44570459)
chr3 (174-269)||(37509147-37509242)
chr3 (175-269)||(35306368-35306462)
chr3 (176-269)||(46317522-46317615)
chr3 (172-260)||(25102298-25102386)
chr3 (173-267)||(1803926-1804020)
chr3 (172-269)||(32415605-32415702)
chr3 (173-269)||(44695648-44695744)
chr3 (172-264)||(48136699-48136790)
chr3 (173-269)||(8847429-8847525)
chr3 (176-269)||(10854895-10854992)
chr3 (192-269)||(51817308-51817385)
chr3 (173-269)||(12905260-12905355)
chr3 (172-231)||(41346348-41346407)
chr3 (189-269)||(18780-18860)
chr3 (201-269)||(12051074-12051142)
chr3 (175-243)||(31647356-31647424)
chr3 (218-269)||(52570818-52570869)
chr3 (221-266)||(20227405-20227450)
chr3 (193-269)||(45899540-45899617)
chr3 (218-269)||(18950-19001)
chr3 (207-269)||(13647047-13647109)
chr3 (207-269)||(39436501-39436563)
chr3 (177-227)||(46055754-46055804)
chr3 (173-205)||(4195441-4195473)
chr3 (192-248)||(44019116-44019172)
[»] scaffold0062 (3 HSPs)
scaffold0062 (172-269)||(16748-16844)
scaffold0062 (172-269)||(26916-27012)
scaffold0062 (172-269)||(37082-37178)
[»] chr6 (16 HSPs)
chr6 (173-269)||(29692318-29692414)
chr6 (175-269)||(10855468-10855562)
chr6 (173-262)||(32786259-32786347)
chr6 (172-269)||(5578310-5578407)
chr6 (194-269)||(6866951-6867026)
chr6 (174-269)||(12191529-12191624)
chr6 (174-250)||(16437568-16437644)
chr6 (173-263)||(26572059-26572144)
chr6 (177-269)||(8324085-8324177)
chr6 (174-269)||(7274192-7274287)
chr6 (218-269)||(7875203-7875254)
chr6 (218-269)||(7880449-7880500)
chr6 (194-269)||(31220325-31220400)
chr6 (213-269)||(27127524-27127580)
chr6 (174-269)||(12175595-12175685)
chr6 (197-269)||(28014671-28014743)
[»] scaffold0809 (1 HSPs)
scaffold0809 (175-263)||(4249-4337)
[»] scaffold0002 (1 HSPs)
scaffold0002 (182-269)||(392114-392205)


Alignment Details
Target: chr4 (Bit Score: 254; Significance: 1e-141; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 55670044 - 55669775
Alignment:
Q  1 tcccgagggtttatggtttactttgaaagaaggttctcgttataggctggtgtttactttccaagtaaaccataatattgtttcgggtcttaagtacacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55670044 tcccgagggtttatggtttactttgaaagaaggttctcgttataggctggtgtttactttccaagtaaaccataatattgtttcgggtcttaagtacacc 55669945  T
Q  101 aacactgtctggaaaactggcatcaagggtaagtaaattggtttattactcat-ttttggatgattaagtttaggagaatgctaaccattgcccttgggg 199  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  55669944 aacactgtctggaaaactggcatcaagggtaagtacattggtttattactcattttttggatgattaagtttaggagaatgctaaccattgcccttgggg 55669845  T
Q  200 cattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55669844 cattggataaggggataaaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 55669775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 35808372 - 35808469
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  35808372 aggagaatgctaaccattgcccttggggcattggataaggggataaaaatagaaatatagcattggaaaattgtgaaaaatgataaatttaacttttt 35808469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 171 - 269
Target Start/End: Original strand, 41956188 - 41956286
Alignment:
Q  171 taggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  41956188 taggagaatgctaaccattgcccttggggcatcggataagaggataaaaatagaaatataacattggaaaatgatgaaaaatgataaatttaacttttt 41956286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 26040336 - 26040433
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||| |||||||||||    
T  26040336 aggagaatgctaaccattgtccttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaagtgataagtttaacttttt 26040433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 27839283 - 27839379
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||| ||||||||||||||||||| |||||    
T  27839283 ggagaatgctaaccattgcccttggggcattggataagggaataaaaatagaaatatagcattgaaaaatgatgaaaaatgataaatttaagttttt 27839379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 2362763 - 2362667
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||| |||||||||||||||||| |||||||||||| |||||    
T  2362763 ggagaatgctaaccattgcccttggggcatcggataaggggataaaaataaaaatatagtattggaaaatggtgaaaagtgataaatttaatttttt 2362667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 23765710 - 23765614
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||||| |||| ||||| |||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  23765710 ggagaatgctaaccattgcctttggtgcattagataaggggataaaaattgaaatatagcattggaaaatggtgaaaagtgataaatttaacttttt 23765614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 34016757 - 34016661
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||| ||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  34016757 ggagaatgctaaccattgtccttgagacattggataaggggataaaaatagaaatatagcattggaaaatggtgaaaagtgatgaatttaacttttt 34016661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 169 - 262
Target Start/End: Complemental strand, 51290566 - 51290473
Alignment:
Q  169 tttaggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaattta 262  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||| || ||||||||||||||||||||||| |||||| |||||||||||    
T  51290566 tttaggagaatgctaaccattgtccttgggacattggataaggggataaaattagaaatatagcattggaaaatgatgaaaagtgataaattta 51290473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 172 - 269
Target Start/End: Complemental strand, 31755071 - 31754974
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||||| |||||| |||||||||||||||| ||||| |||||||| |||| |||||| |||||| ||||||||||||||||||    
T  31755071 aggagaatgctaaccattgccattggggtattggataaggggataaaaatataaatatagaattgaaaaatgatgaaaagtgataaatttaacttttt 31754974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 19876160 - 19876256
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||| ||| ||||||  |||||||||||||||||| |||||||||||||| |||||||||| ||||||| ||||||||||||||||||    
T  19876160 ggagaatgctaacaattacccttgaagcattggataaggggataaaaatagaaatatagtattggaaaatagtgaaaagtgataaatttaacttttt 19876256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 176 - 269
Target Start/End: Complemental strand, 30475554 - 30475461
Alignment:
Q  176 gaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||||| ||| ||||||||||| |||| ||||| |||||||| |||| ||||||||||||| ||||||||||||||||||    
T  30475554 gaatgctaaccattgcccttagggtattggataaggagataaaaataaaaatatagtattgaaaaatggtgaaaagtgataaatttaacttttt 30475461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 20811395 - 20811299
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||| |||||| |||||| |||  ||||||||||| ||||||||||||| ||||||||| ||||||||| ||||||||||||||||||    
T  20811395 ggagaatgctaactattgcctttggggtattaaataaggggataaaaatagaaatataacattggaaattggtgaaaagtgataaatttaacttttt 20811299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 31168266 - 31168170
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||| ||||||||||| ||||| || ||||||||| |||||||| | |||||||||||||||||||||| |||||||||||| |||||    
T  31168266 ggagaatgctaactattgcccttggagcattagacaaggggataaaaatagaattttagcattggaaaatggtgaaaagtgataaatttaatttttt 31168170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 32131274 - 32131178
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||| ||||||||||||||||  |||||||||| | |||| |||||||||||||| ||||||||||||||| || ||||||||||||||||||    
T  32131274 ggagaatgttaaccattgcccttggaacattggataaagagataaaaatagaaatatagtattggaaaatggtgataagtgataaatttaacttttt 32131178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 177 - 269
Target Start/End: Complemental strand, 45688871 - 45688779
Alignment:
Q  177 aatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||  ||||||| |||||||||||||||| ||||||||| ||||||||| |||||| |||||| ||||||||||||||||||    
T  45688871 aatgctaaccattgttcttggggtattggataaggggataaaaatagaaacatagcattgaaaaatgatgaaaagtgataaatttaacttttt 45688779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 51267056 - 51266960
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||| |||||||||||| |||||  |||||||||||| |||| |||||||||||||| |||| ||||||||||||| ||||||||||||||||||    
T  51267056 ggagaaggctaaccattgctcttggaacattggataaggagataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatttaacttttt 51266960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 171 - 269
Target Start/End: Original strand, 34316697 - 34316796
Alignment:
Q  171 taggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgat-aaatttaacttttt 269  Q
    |||||||||||| |||||||||||||||||||||||||||| |||| ||||| ||||||| ||||| ||||| ||||||| |||| ||||||||||||||    
T  34316697 taggagaatgctcaccattgcccttggggcattggataaggagataaaaatataaatataacattgaaaaatagtgaaaagtgataaaatttaacttttt 34316796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 174 - 269
Target Start/End: Original strand, 50514592 - 50514686
Alignment:
Q  174 gagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||| |||| | ||||||||||| ||||| ||||||||||||| ||||| |||||||| |||| ||||||||||||||||||    
T  50514592 gagaatgctaaccattgctcttgtgacattggataagaggata-aaatagaaatataacattgaaaaatggtaaaaagtgataaatttaacttttt 50514686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 174 - 269
Target Start/End: Complemental strand, 54339243 - 54339149
Alignment:
Q  174 gagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||| | |||||||||||||||| |||||| ||||| ||||||| ||||| ||||||||| |||||||||||||||| |||||    
T  54339243 gagaatgctaaccattgtcgttggggcattggataaagggataaaaatataaatataacattgaaaaatggtg-aaaatgataaatttaatttttt 54339149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 175 - 269
Target Start/End: Complemental strand, 31487851 - 31487757
Alignment:
Q  175 agaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||| |||||||||||||||| |||||| ||||||||||| ||||| ||||||||||||| ||||| || |||| |||||||||| |||||||    
T  31487851 agaatgttaaccattgcccttggagcattgaataaggggataaaaataaaaatatagcattgaaaaatagttaaaagtgataaatttgacttttt 31487757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 26831763 - 26831859
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||| |||| ||||||||||||| ||||| ||||| |||||||||||||  |||| |||||||| |||| ||||||||||| ||||||    
T  26831763 ggagaatgctaacaattgtccttggggcattgaataagaggataaaaatagaaatataatattgtaaaatggtaaaaagtgataaatttatcttttt 26831859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 33951804 - 33951736
Alignment:
Q  201 attggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||| ||||||||||| |||||||||||||| |||||||||| ||||||| ||||||||||||||||||    
T  33951804 attgaataaggggataaaaatagaaatatagtattggaaaattgtgaaaagtgataaatttaacttttt 33951736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 260
Target Start/End: Original strand, 46695938 - 46696026
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatt 260  Q
    ||||||||| |||| |||||| |||||| |||||||||| ||||| ||||| |||||||| |||| ||||||||||||| |||||||||    
T  46695938 aggagaatgttaactattgcctttggggtattggataagtggataaaaataaaaatataggattgaaaaatggtgaaaagtgataaatt 46696026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 10100089 - 10100186
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||  | |||| ||||||| ||| ||||||||||||| ||||| |||||||  ||| |||||||||||||| | ||||||||||||||||    
T  10100089 aggagaatgctgtctattgtccttgggacatcggataaggggataaaaatataaatataatattagaaaatggtgaaaagttataaatttaacttttt 10100186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 19328950 - 19329001
Alignment:
Q  218 aaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  19328950 aaatagaaatatagcattggaaaatggtgaaatgtgataaatttaacttttt 19329001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 269
Target Start/End: Original strand, 9693361 - 9693454
Alignment:
Q  175 agaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||| ||||||||||| | |||| |||||||||||||||||| ||||| | |||||  ||| ||||| ||||||||||||||||||||| |||||    
T  9693361 agaacgctaaccattgtctttggcgcattggataaggggataaaaataaagatataatatt-gaaaaaggtgaaaaatgataaatttaaattttt 9693454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 269
Target Start/End: Complemental strand, 40436210 - 40436117
Alignment:
Q  176 gaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||| ||||| |||| | ||||| ||||||||||||||||| ||||  ||| ||||||||  |||||| |||||||| ||||||||||||||||    
T  40436210 gaattctaacgattgtctttgggacattggataaggggataaaaatgaaaaaatagcattaaaaaatgatgaaaaataataaatttaacttttt 40436117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 35675183 - 35675263
Alignment:
Q  189 tgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||| ||||  |||| |||||||||||| | ||||| |||| ||||||| |||| |||||||||||||    
T  35675183 tgcccttggggcattggttaagacgataaaaatagaaatattgtattgggaaatagtgaaaagtgatgaatttaacttttt 35675263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 16559975 - 16560025
Alignment:
Q  177 aatgctaaccattgcccttggggcattggataaggggatagaaatagaaat 227  Q
    ||||||||||||||||||||||||||||||||| || ||| ||||||||||    
T  16559975 aatgctaaccattgcccttggggcattggataaaggaataaaaatagaaat 16560025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 19328724 - 19328777
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaa 226  Q
    ||||||||||||||||||  ||| |||||||||||||||||||| |||||||||    
T  19328724 ggagaatgctaaccattgttcttagggcattggataaggggataaaaatagaaa 19328777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 269
Target Start/End: Complemental strand, 45088148 - 45088103
Alignment:
Q  224 aaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||||| |||||| |||||||||||| |||||    
T  45088148 aaatatagcattggaaaatgatgaaaagtgataaatttaatttttt 45088103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 242
Target Start/End: Original strand, 53566935 - 53566996
Alignment:
Q  181 ctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaat 242  Q
    |||||||||| | |||||||||||| ||| | |||| ||||||||||||||||||| |||||    
T  53566935 ctaaccattgtctttggggcattggttaaagagataaaaatagaaatatagcattgaaaaat 53566996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 3769897 - 3769849
Alignment:
Q  221 tagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||| |||||| ||||||||||||| |||||||||| |||||||    
T  3769897 tagaaatattgcattgaaaaatggtgaaaagtgataaatttgacttttt 3769849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 30618065 - 30617985
Alignment:
Q  189 tgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||| ||||||||| |||| ||||| | |||||||||| ||||||| ||||| ||||||   || |||||||||||||    
T  30618065 tgcccttagggcattggttaagaggataaacatagaaatattgcattgggaaatgatgaaaagcaatgaatttaacttttt 30617985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 47188695 - 47188735
Alignment:
Q  226 atatagcattggaaaatggtgaaaaatgataaatttaactt 266  Q
    |||||| |||||||||||||||||| |||||||||||||||    
T  47188695 atatagtattggaaaatggtgaaaagtgataaatttaactt 47188735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 35511202 - 35511253
Alignment:
Q  218 aaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||| | |||||||||||||||||| |||| ||||| |||||||    
T  35511202 aaatagaaatattgtattggaaaatggtgaaaagtgatgaatttgacttttt 35511253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 54400336 - 54400286
Alignment:
Q  177 aatgctaaccattgcccttggggcattggataaggggatagaaatagaaat 227  Q
    |||||||||||||||||| |||||||||||||| || ||| ||||| ||||    
T  54400336 aatgctaaccattgccctcggggcattggataaaggaataaaaataaaaat 54400286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 52341694 - 52341637
Alignment:
Q  212 ggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||| ||||||||||||    |||||||||| ||||||||||| |||||||||||||    
T  52341694 ggatacaaatagaaatattatgttggaaaatgatgaaaaatgatgaatttaacttttt 52341637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 29722074 - 29722154
Alignment:
Q  189 tgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||| ||||||||| || ||| | | ||||||| |||| |  ||| || ||||||||||||||| |||||||||||||    
T  29722074 tgcccttagggcattggttaggggaacaaaaatagatatattgtgttgaaatatggtgaaaaatgatgaatttaacttttt 29722154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 51018396 - 51018452
Alignment:
Q  213 gatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||| ||||||||| || |||||| ||||||||||||| |||  |||||||||||||    
T  51018396 gataaaaatagaaacattgcattgaaaaatggtgaaaagtgaagaatttaacttttt 51018452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 3e-41; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 172 - 269
Target Start/End: Complemental strand, 34874700 - 34874603
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  34874700 aggagaatgctaaccattgcccttggggcattggataaggggataaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaatttttt 34874603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 171 - 269
Target Start/End: Original strand, 41147450 - 41147548
Alignment:
Q  171 taggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||| |||||||||||||    
T  41147450 taggagaatgctaaccattgtccttggggcattggataaggggataaaaatagaaatatagcattgaaaaatggtaaaaaatgattaatttaacttttt 41147548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 27209695 - 27209791
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  27209695 ggagaatgctaaccattgtccttggggcattggataaagggataaaaatagaaatataacattggaaaatggtgaaaattgataaatttaacttttt 27209791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 49508707 - 49508803
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  49508707 aggaaaatgttaaccattgcccttggggcattggataaggggataaaaatagaaatatagcattggaaaatggtg-aaagtgataaatttaacttttt 49508803  T

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Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 2125681 - 2125777
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||||    
T  2125681 ggagaatgctaaccattgttcttggggcattggataaggggataaaaatagaaatatagcattgaaaaattgtgaaaagtgataaatttaacttttt 2125777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 11385780 - 11385880
Alignment:
Q  169 tttaggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaactttt 268  Q
    |||||||||||||| |||||||||||||  |||||||||||||||||| |||||||||||||| |||||||||||||||||| | |||||||||||||||    
T  11385780 tttaggagaatgctgaccattgcccttgcagcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaagttataaatttaactttt 11385879  T
Q  269 t 269  Q
    |    
T  11385880 t 11385880  T

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Target: chr1; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 28850884 - 28850980
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||||||||||||||| |||||| | ||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  28850884 ggagaatgctaaccattgcccttggggcattagataagagaataaaaatagaaatataacattggaaaatggtgaaaagtgataaatttaacttttt 28850980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 42607298 - 42607394
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||| |||||||||||||| ||| |||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  42607298 ggagaatgttaaccattgcccttagggtattggataaggggataaaaataaaaatatagcattgaaaaatggtgaaaaatgataaatttaacttttt 42607394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 4940713 - 4940810
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||||  | || |||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  4940713 aggagaatgctaaccattgctttaggcgcattggataaggggataaaaatagaaatatagcattggaaaatggttaaaagtgataaatttaacttttt 4940810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 22346210 - 22346307
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||| |||| ||||||||||||| |||||||||||| |||||    
T  22346210 aggagaatgctaaccattgcccttggggctttggataagggaataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatttaatttttt 22346307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 43433907 - 43433811
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||| |||  ||||||||||||| ||||||||||||||||||    
T  43433907 ggagaatgctaactattgctcttggggcattggataaggggataaaaatagaaatatagtattaaaaaatggtgaaaagtgataaatttaacttttt 43433811  T

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Target: chr1; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 7190448 - 7190545
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||| |||||||||||||||||| |||| ||||| ||||||||||||||||||  |||||| |||||| ||||||||||||||||||    
T  7190448 aggagaatgctaacctttgcccttggggcattggttaagaggataaaaatagaaatatagcattcaaaaatgatgaaaagtgataaatttaacttttt 7190545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 47655344 - 47655441
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||||||||  | ||||| ||||||||||| |||||||| |||||||||| ||||||||||||| ||||||||||||||||||    
T  47655344 aggagaatgctaaccattgcccttaagacattgaataaggggataaaaatagaagtatagcattgaaaaatggtgaaaattgataaatttaacttttt 47655441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 177 - 269
Target Start/End: Complemental strand, 40845379 - 40845287
Alignment:
Q  177 aatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||||| | ||||| ||||||||||| |||||||||||||| |||| ||||||||||||| ||||||||||||||||||    
T  40845379 aatgctaaccattgcccttgagacattgaataaggggataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatttaacttttt 40845287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 172 - 269
Target Start/End: Complemental strand, 11386114 - 11386017
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||| ||||||| ||||||| |||| |||||  ||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  11386114 aggagaatgctcaccattgtccttgggacattagataattggataaaaatagaaatatagcattggaaaatggtaaaaattgataaatttaacttttt 11386017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 172 - 269
Target Start/End: Complemental strand, 29966956 - 29966859
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||| ||||||||| |||||| |||||||||||||||||| ||||| ||||||||||||| |||||||  ||||||||||||||||| |||||    
T  29966956 aggagaatgttaaccattgtccttggagcattggataaggggataaaaatataaatatagcattgaaaaatggcaaaaaatgataaatttaatttttt 29966859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 32213862 - 32213959
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||| ||||||||||| |||||| |||| |||||||||||| ||||||||||| | ||||||||||||||||||| |||||||||||| |||||    
T  32213862 aggagaatactaaccattgctcttgggacattagataaggggataaaaatagaaatagaacattggaaaatggtgaaaagtgataaatttaatttttt 32213959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 932151 - 932227
Alignment:
Q  193 cttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||| |||||    
T  932151 cttggggcattggataaggggataaaaatagaaatatagcattggaaaatgatgaaaaattataaatttaatttttt 932227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 24140904 - 24140809
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||  |||||||||||||||||  ||||||| ||||||||||    
T  24140904 ggagaatgctaaccattgcctttggggcattg-ataaggggataaaaatagaaatatactattggaaaatggtgaaacgtgataaacttaacttttt 24140809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 170 - 269
Target Start/End: Original strand, 50295404 - 50295503
Alignment:
Q  170 ttaggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||| ||| ||| | | |||||||||||||||||||| || |||||||||||||| |||||||||| ||||||| ||||||||||||||||||    
T  50295404 ttaggagaatgttaatcatcgtctttggggcattggataagggggtaaaaatagaaatatagtattggaaaatagtgaaaagtgataaatttaacttttt 50295503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 172 - 269
Target Start/End: Complemental strand, 45721884 - 45721788
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||| ||||||||||||| |||| ||||||||||||| |||| ||||| ||||||| |||||||||||||| |||| ||||||||||||||||||    
T  45721884 aggagaaggctaaccattgcc-ttggagcattggataaggtgataaaaataaaaatataacattggaaaatggtaaaaactgataaatttaacttttt 45721788  T

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Target: chr1; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 269
Target Start/End: Complemental strand, 49902037 - 49901962
Alignment:
Q  194 ttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||| |||||||||| ||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  49902037 ttggggtattggataagaggataaaaatagaaatatagtattggaaaatggtgaaaagtgataaatttaacttttt 49901962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 172 - 269
Target Start/End: Complemental strand, 5945553 - 5945456
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||| |||||| ||||||||||| |  ||| ||||||||||||  ||||| ||||||||||||| |||||||||| |||||||    
T  5945553 aggagaatgctaaccattgtccttggagcattggataacgaaataaaaatagaaatatgacattgaaaaatggtgaaaagtgataaattttacttttt 5945456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 26469555 - 26469652
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||| || |||||||||   ||||||||| |||||| ||||| ||||||||||||| |||||  |||||||||||||||||||||||||    
T  26469555 aggagaatgctaatcactgcccttggaatattggataaagggataaaaataaaaatatagcattgaaaaataatgaaaaatgataaatttaacttttt 26469652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 172 - 269
Target Start/End: Complemental strand, 33930099 - 33930002
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||| ||||||||| | ||| |  |||||||||||||||| ||||| ||||||||||||| ||||| ||||||| ||||||||||||||||||    
T  33930099 aggagaatgttaaccattgtctttgagatattggataaggggataaaaatataaatatagcattgaaaaatagtgaaaactgataaatttaacttttt 33930002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 6170525 - 6170621
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||| ||| | ||||| ||| || ||||||||| | |||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  6170525 ggagaatgttaatctttgccattgaggtattggataaagagataaaaatagaaatatagcattggaaaatagagaaaaatgataaatttaacttttt 6170621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 31975619 - 31975523
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||||||||| || ||||||||| | |||| ||||||||||||| ||||| |||||| | |||| || |||||||||||||||    
T  31975619 ggagaatgctaaccattgcccttgaggtattggataaagagatataaatagaaatataacattgaaaaatgataaaaagtggtaaatttaacttttt 31975523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 175 - 269
Target Start/End: Complemental strand, 8244219 - 8244128
Alignment:
Q  175 agaatgctaa-ccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||| ||||||| |||||||||||||||||||||||| | ||||||||||| ||||||||||||    | ||||||||||||||||||||    
T  8244219 agaatgctaatccattgctcttggggcattggataaggggataaatatagaaatataacattggaaaatg----ataatgataaatttaacttttt 8244128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 269
Target Start/End: Complemental strand, 52396571 - 52396479
Alignment:
Q  177 aatgctaaccattgcccttgg-ggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||| |  |||| ||||||||||||||||||| |||||||||||||| |||| |||||| | |||| ||||||||||||||||||    
T  52396571 aatgctaaccattactattggaggcattggataaggggataaaaatagaaatatagtattgaaaaatgat-aaaagtgataaatttaacttttt 52396479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 28277454 - 28277552
Alignment:
Q  172 aggagaatgctaaccattgcccttggg-gcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||   ||| || | |||||||||| ||||| ||||||||||||| ||||| |||||| | |||| ||||||||||||||||||    
T  28277454 aggagaatgctaaccattattcttaggagtattggataagaggataaaaatagaaatataacattgaaaaatgataaaaagtgataaatttaacttttt 28277552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 44287004 - 44286908
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||| |||  ||||||||||||  ||||  ||||| ||||| ||||| || ||| || ||| ||||||||||||||||||||||||||    
T  44287004 ggagaatgctaactattatccttggggcattatataaaaggataaaaataaaaatacagtattagagaatagtgaaaaatgataaatttaacttttt 44286908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 269
Target Start/End: Complemental strand, 4656147 - 4656052
Alignment:
Q  174 gagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||| ||| ||||||| | ||  ||||||||||||  ||| ||||| ||||||| ||||||||||| || |||| ||||||||||||||||||    
T  4656147 gagaatgttaatcattgccttcggaacattggataaggaaataaaaataaaaatataacattggaaaatagtaaaaagtgataaatttaacttttt 4656052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 269
Target Start/End: Complemental strand, 16691428 - 16691330
Alignment:
Q  171 taggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||| ||||||||  | ||||||||||||||||| ||||  |||| ||||||||| || | ||||| ||||||| ||||||||  |||||||||||||    
T  16691428 taggaaaatgctaatgagtgcccttggggcattggttaagatgataaaaatagaaacattgtattgggaaatggtaaaaaatgaagaatttaacttttt 16691330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 269
Target Start/End: Complemental strand, 50154606 - 50154509
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||| | ||||   ||| |||||   |||| ||||| ||||||||||||| |||||| | |||||||||||||||||| ||||    
T  50154606 aggagaatgctaaccattgtcattggattattagataaaaagataaaaatataaatatagcattgaaaaatgataaaaaatgataaatttaacctttt 50154509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 14331953 - 14331873
Alignment:
Q  189 tgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||| |||   |||| ||||||||| || | ||||| ||||||||||||||||  |||||||||||||    
T  14331953 tgcccttggggcattggttaaaatgataaaaatagaaacattgtattgggaaatggtgaaaaatgaagaatttaacttttt 14331873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 253
Target Start/End: Original strand, 37275238 - 37275315
Alignment:
Q  176 gaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatg 253  Q
    ||||||||||||||||||||  |||||||||||| || | | |||||||||| | | ||||||||||| | |||||||    
T  37275238 gaatgctaaccattgcccttcaggcattggataaaggtacaaaaatagaaattttgtattggaaaatgataaaaaatg 37275315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 205
Target Start/End: Complemental strand, 8772541 - 8772511
Alignment:
Q  175 agaatgctaaccattgcccttggggcattgg 205  Q
    |||||||||||||||||||||||||||||||    
T  8772541 agaatgctaaccattgcccttggggcattgg 8772511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 210
Target Start/End: Complemental strand, 26060321 - 26060288
Alignment:
Q  177 aatgctaaccattgcccttggggcattggataag 210  Q
    ||||||||||||||||||||| ||||||||||||    
T  26060321 aatgctaaccattgcccttggagcattggataag 26060288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 30223050 - 30222993
Alignment:
Q  174 gagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatag 231  Q
    ||||||||| ||| ||||||||   |||||||||||||||||| ||||| ||||||||    
T  30223050 gagaatgcttaccgttgcccttaaagcattggataaggggataaaaatataaatatag 30222993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 17403056 - 17402984
Alignment:
Q  197 gggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||| |||||||||| ||||  |||||| | |||  |||||||| |||| |||| |||||||||||||    
T  17403056 gggcattggttaaggggataaaaattaaaatattgtattaaaaaatggtaaaaagtgatgaatttaacttttt 17402984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 38680885 - 38680917
Alignment:
Q  177 aatgctaaccattgcccttggggcattggataa 209  Q
    ||||||||||||||| |||||||||||||||||    
T  38680885 aatgctaaccattgctcttggggcattggataa 38680917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 261
Target Start/End: Complemental strand, 41493024 - 41492953
Alignment:
Q  189 tgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaattt 261  Q
    |||||||  |||||||| |||| ||||| |||||||||||| ||||||| || ||||||||| |||| |||||    
T  41493024 tgcccttaaggcattggttaagaggata-aaatagaaatattgcattgggaagtggtgaaaagtgatgaattt 41492953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 43168257 - 43168177
Alignment:
Q  189 tgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||| ||||||||| ||||  |||| ||||||||| || | ||||| |||||||||||| |||  | |||||||||||    
T  43168257 tgcccttagggcattggttaagatgataaaaatagaaacattgtattgggaaatggtgaaaagtgaagagtttaacttttt 43168177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 44359662 - 44359742
Alignment:
Q  189 tgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||| |||||| ||||  |||| ||||||||| || | || || |||||||||||| |||  |||||||||||||    
T  44359662 tgcccttgggccattggttaagatgataaaaatagaaacattgtatcgggaaatggtgaaaagtgaagaatttaacttttt 44359742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 1e-40; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 19389283 - 19389383
Alignment:
Q  169 tttaggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaactttt 268  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||||    
T  19389283 tttaggagaatgctaaccattgcccttggggcattggataaggggataaaaatagaaatatagtattggaaaattgtgaaaagtgataaatttaactttt 19389382  T
Q  269 t 269  Q
    |    
T  19389383 t 19389383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 174 - 269
Target Start/End: Complemental strand, 45338135 - 45338040
Alignment:
Q  174 gagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  45338135 gagaatgctaaccattgtcctttgggcattggataaggggataaaaatagaaatataacattgaaaaatggtgaaaaatgataaatttaacttttt 45338040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 172 - 269
Target Start/End: Complemental strand, 4990066 - 4989969
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||| ||||| |||||  |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4990066 aggagaatgctaatcattgtccttgtagcattggataaggggataaaaatagaaatatagcattggaaaatagtgaaaaatgataaatttaacttttt 4989969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 269
Target Start/End: Complemental strand, 21016368 - 21016270
Alignment:
Q  171 taggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||| |||||||||||||||| ||||||| ||||||||||||||| |||||||||||||  |||| ||||||||||||| ||||| ||||||||||||    
T  21016368 taggataatgctaaccattgcctttggggctttggataaggggataaaaatagaaatataatattgaaaaatggtgaaaagtgatagatttaacttttt 21016270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 21016033 - 21016130
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||||| ||||||||||||| ||||| |||||||| |||| ||||| ||||||||||||    
T  21016033 aggagaatgctaaccattgcctttgaggctttggataaggggataaaaatagaaatataacattgaaaaatggttaaaagtgatagatttaacttttt 21016130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 5129433 - 5129529
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||||||| | ||||| |||||||||||| |||| |||||||||||||| |||||| |||||| |||||||||||| |||||    
T  5129433 ggagaatgctaaccattgcccttagagcatttgataaggggataaaaattgaaatatagcattgaaaaatgatgaaaagtgataaatttaatttttt 5129529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 171 - 269
Target Start/End: Complemental strand, 35930270 - 35930172
Alignment:
Q  171 taggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||| |||||||||||||||| ||||||||||||  |||| ||||| |||||||| |||| |||||| |||||||| ||||||||||||||||    
T  35930270 taggagaatgataaccattgcccttggagcattggataagaagataaaaataaaaatatagtattgaaaaatgatgaaaaataataaatttaacttttt 35930172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 172 - 269
Target Start/End: Complemental strand, 6939291 - 6939194
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||| || |||||||||| |||| | |||| ||||||||||||| ||||| |||||||||| || ||||||||||||||||||    
T  6939291 aggagaatgctaaccattgtccatggggcattgaataatgagataaaaatagaaatataacattgaaaaatggtgacaagtgataaatttaacttttt 6939194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 172 - 269
Target Start/End: Complemental strand, 26672922 - 26672826
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||| |||||||  ||||||||| |||||| |||||||||||||||||||||||||| | ||||| ||||||||||| |||||    
T  26672922 aggagaatgctaaccattgtccttgggt-attggataaagggataaaaatagaaatatagcattggaaaatgataaaaaaggataaatttaatttttt 26672826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 205 - 269
Target Start/End: Complemental strand, 18069062 - 18068998
Alignment:
Q  205 gataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18069062 gataaggggataaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaacttttt 18068998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 200 - 269
Target Start/End: Complemental strand, 8018866 - 8018797
Alignment:
Q  200 cattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||| |||||||||||||  |||||||||||||||||| ||||||||||||||||||    
T  8018866 cattggataaggggataaaaatagaaatataatattggaaaatggtgaaaagtgataaatttaacttttt 8018797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 200 - 269
Target Start/End: Original strand, 25249345 - 25249414
Alignment:
Q  200 cattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||| || ||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  25249345 cattggataagggggtaaaaataaaaatatagcattggaaaatggtgaaaagtgataaatttaacttttt 25249414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 177 - 269
Target Start/End: Original strand, 26195354 - 26195446
Alignment:
Q  177 aatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||| |||||  ||||| ||||  ||||||||||| ||||||||||||| ||||||||||| ||||||| ||||||||||||||||||    
T  26195354 aatgctaactattgcttttgggacattaaataaggggataaaaatagaaatataacattggaaaattgtgaaaagtgataaatttaacttttt 26195446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 172 - 269
Target Start/End: Complemental strand, 3174591 - 3174496
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||| |  | |||| |||||| |||||||| ||||||||||||   |||||||||||||||||||| |||||||| |||||||    
T  3174591 aggagaatgctaaccattgtc--tagggcgttggatgaggggataaaaatagaaatattatattggaaaatggtgaaaaattataaatttgacttttt 3174496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 199 - 269
Target Start/End: Complemental strand, 44874431 - 44874361
Alignment:
Q  199 gcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||| ||||| ||||||| ||||| ||||||||||||| |||||||||||| |||||    
T  44874431 gcattggataaggggataaaaatataaatataacattgaaaaatggtgaaaagtgataaatttaaattttt 44874361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 269
Target Start/End: Complemental strand, 10694940 - 10694843
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||| ||||  |||||| | |||||||||||||||  ||||| |||||||| |||  |||||||| |||| ||||||||||||||||||    
T  10694940 aggagaatgctaatcattatccttggtgtattggataaggggattaaaataaaaatatagtatttaaaaatggtaaaaagtgataaatttaacttttt 10694843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 197 - 262
Target Start/End: Complemental strand, 7532893 - 7532828
Alignment:
Q  197 gggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaattta 262  Q
    ||||||||| |||||||||| |||||||||||| | |||||||||||||||||| |||| ||||||    
T  7532893 gggcattggttaaggggataaaaatagaaatattgtattggaaaatggtgaaaagtgatgaattta 7532828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 269
Target Start/End: Complemental strand, 37433397 - 37433301
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||| ||||||||||||||   |||||  |||||||||||||||| |||| || ||||| ||||| |||||| |||||| ||||||||||||||||||    
T  37433397 aggaaaatgctaaccattgtttttgggt-attggataaggggataaaaatcgacatataacattgaaaaatgatgaaaagtgataaatttaacttttt 37433301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 250
Target Start/End: Original strand, 19976465 - 19976545
Alignment:
Q  171 taggagaatgctaaccattgcccttggggcattggataag-gggatagaaatagaaatatagcattggaaaatggtgaaaa 250  Q
    ||||| |||||||||||||||| ||||||| ||||||||| |||||| || ||||||||||  |||| |||||||||||||    
T  19976465 taggataatgctaaccattgcctttggggctttggataagtgggataaaagtagaaatataatattgaaaaatggtgaaaa 19976545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 18809000 - 18808956
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggata 216  Q
    |||| |||| |||||||||||||||||||||||||||||||||||    
T  18809000 aggataatgttaaccattgcccttggggcattggataaggggata 18808956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 269
Target Start/End: Complemental strand, 26892884 - 26892822
Alignment:
Q  207 taaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||| ||||| |||||||||||||  |||| ||||| || |||||||||||||||||||||||    
T  26892884 taagaggataaaaatagaaatataatattgaaaaattgtaaaaaatgataaatttaacttttt 26892822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 22488765 - 22488798
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattgg 205  Q
    ||||||||||||||||||||||||||||||||||    
T  22488765 aggagaatgctaaccattgcccttggggcattgg 22488798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 14855357 - 14855457
Alignment:
Q  169 tttaggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaactttt 268  Q
    |||||||||| | ||||||||||| ||   | |||  ||||||||||| |||||||||||||| |||  ||||| |||||||  |||||||||||| |||    
T  14855357 tttaggagaaggttaaccattgcctttaaagtattaaataaggggataaaaatagaaatatagtattaaaaaatagtgaaaagagataaatttaacattt 14855456  T
Q  269 t 269  Q
    |    
T  14855457 t 14855457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 34713892 - 34713991
Alignment:
Q  169 tttaggagaatgctaaccattgcccttggggcattggataaggggatagaaatag--aaatatagcattggaaaatggtgaaaaatgataaatttaactt 266  Q
    |||||| ||||||||||||||| ||| ||   |||| ||||||||||| ||||||  | |||||| |||| ||||||||| ||| |||||||||| ||||    
T  34713892 tttaggtgaatgctaaccattgtcctaggaatattgaataaggggataaaaatagatatatatagtattgaaaaatggtgcaaagtgataaatttcactt 34713991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 6433631 - 6433580
Alignment:
Q  218 aaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||| ||||||||||||| |||||||| |||| | ||||||||||||||||    
T  6433631 aaataaaaatatagcattgaaaaatggtaaaaagttataaatttaacttttt 6433580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 269
Target Start/End: Original strand, 34421298 - 34421391
Alignment:
Q  176 gaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||  | ||||||||||  ||||| ||||  |||| ||||||||| || | ||| | |||||||||||||||| ||||| ||||||||    
T  34421298 gaatgctaaagagtgcccttgggaaattggttaagatgataaaaatagaaacattgtatttggaaatggtgaaaaatgaaaaattcaacttttt 34421391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 9e-39; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 765126 - 765223
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||| ||||||||||||||||||    
T  765126 aggagaatgctaaccattgcccttggggcattggataaggggataaaaatagaaatataacattggaaaattgtgaaaagtgataaatttaacttttt 765223  T

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Target: chr2; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 39401511 - 39401607
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||| |||| |||||||||||||    
T  39401511 aggagaatgctaaccattgcccttggggcattggataaggggataaaaatagaaatataacattgaaaaatggtgaaaagtgat-aatttaacttttt 39401607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 27495259 - 27495159
Alignment:
Q  169 tttaggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaactttt 268  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||| ||||||| |||| |||||||||||||| ||||||||||||| |||    
T  27495259 tttaggagaatgctaaccattgcacttggggcattgaataaggggataaaaataaaaatataacattagaaaatggtgaaaagtgataaatttaacattt 27495160  T
Q  269 t 269  Q
    |    
T  27495159 t 27495159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 170 - 265
Target Start/End: Complemental strand, 1321303 - 1321208
Alignment:
Q  170 ttaggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaact 265  Q
    ||||||||||||||||||||| |||||| |||||||||||| ||||| ||||||||||||| |||||||||||||| |||||| ||||||||||||    
T  1321303 ttaggagaatgctaaccattgtccttggagcattggataagaggataaaaatagaaatataacattggaaaatggtaaaaaataataaatttaact 1321208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 175 - 269
Target Start/End: Complemental strand, 862719 - 862625
Alignment:
Q  175 agaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||| ||||||||| |||||||| |||| |||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  862719 agaatgctaacaattgcccttagggcattgaataatgggataaaaatagaaatatagtattggaaaatggtgaaaagtgataaatttaacttttt 862625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 6999334 - 6999238
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||| ||||||   ||||||| ||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  6999334 ggagaatgctaatcattgcttctggggcaatggataaggagataaaaatagaaatatagtattggaaaatggtgaaaaatgataaatttaacttttt 6999238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 170 - 269
Target Start/End: Complemental strand, 2966675 - 2966576
Alignment:
Q  170 ttaggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||||   || ||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||| |||||    
T  2966675 ttaggagaatgctaaccatttatctggggacattggataaggggataaaaatagaaatataacattggaaaatggtgaaaagtgataaatttaatttttt 2966576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 177 - 267
Target Start/End: Complemental strand, 16361694 - 16361604
Alignment:
Q  177 aatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttt 267  Q
    ||||||||| ||||||||||| |||||||||||||| ||| ||||||||||||| |||||||||||||| |||| ||||||||||||||||    
T  16361694 aatgctaacaattgcccttggagcattggataagggaataaaaatagaaatataacattggaaaatggtaaaaattgataaatttaacttt 16361604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 181 - 269
Target Start/End: Complemental strand, 17603935 - 17603847
Alignment:
Q  181 ctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||| |||||||||||||||||||||||| | |||| ||||||||||||||||||| |||||| | |||||||||||||||||||||||    
T  17603935 ctaatcattgcccttggggcattggataacgcgataaaaatagaaatatagcattgaaaaatgataaaaaatgataaatttaacttttt 17603847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 267
Target Start/End: Complemental strand, 33726498 - 33726418
Alignment:
Q  187 attgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttt 267  Q
    |||||||||||||||||||||||||||||| ||||| |||||||| |||| ||||||||||||||| ||||||||||||||    
T  33726498 attgcccttggggcattggataaggggataaaaataaaaatatagtattgaaaaatggtgaaaaataataaatttaacttt 33726418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 177 - 269
Target Start/End: Original strand, 39085773 - 39085865
Alignment:
Q  177 aatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||| |||||| |||||||||| |||||| ||||||||||||| |||||||||||| | |||| ||||||||||||||||||    
T  39085773 aatgctaaccattgctcttgggacattggataaagggataaaaatagaaatataacattggaaaatgataaaaagtgataaatttaacttttt 39085865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 174 - 269
Target Start/End: Original strand, 13997882 - 13997977
Alignment:
Q  174 gagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||  ||| || ||| |||||||| ||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  13997882 gagaatgctaaccattgcttttgaggaattagataagggaataaaaatagaaatatagcattgaaaaattgtgaaaaatgataaatttaacttttt 13997977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 171 - 269
Target Start/End: Original strand, 17056033 - 17056130
Alignment:
Q  171 taggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||| ||| ||||||||| || |  ||||||||||||| ||||||||||||||||||    
T  17056033 taggagaatgctaaccattgcccttagggcattggataaagggataaaaaaagaaatataacact-aaaaatggtgaaaagtgataaatttaacttttt 17056130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 171 - 269
Target Start/End: Original strand, 17068480 - 17068577
Alignment:
Q  171 taggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||| ||| ||||||||| || |  ||||||||||||| ||||||||||||||||||    
T  17068480 taggagaatgctaaccattgcccttagggcattggataaagggataaaaaaagaaatataacact-aaaaatggtgaaaagtgataaatttaacttttt 17068577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 171 - 269
Target Start/End: Original strand, 17074463 - 17074560
Alignment:
Q  171 taggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||||||||| ||||||| ||||| |||||| ||||||||||||| || |  ||||||||||||| ||||||||||||||||||    
T  17074463 taggagaatgctaaccattgcccttagggcattagataaagggataaaaatagaaatataacact-aaaaatggtgaaaagtgataaatttaacttttt 17074560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 181 - 269
Target Start/End: Original strand, 35445275 - 35445363
Alignment:
Q  181 ctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||| ||||| |||||||| ||||||||||| ||||| ||||||| ||||| ||||||||||||| ||||||||||||||||||    
T  35445275 ctaaccattacccttagggcattgaataaggggataaaaatataaatataacattgaaaaatggtgaaaagtgataaatttaacttttt 35445363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 172 - 269
Target Start/End: Complemental strand, 33864488 - 33864391
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||| ||||||||||||||| | ||||| ||||| ||||| ||||| |||||| |||||||||||||||||||| | ||||||||||| ||||    
T  33864488 aggagaatgttaaccattgcccttgagacattgaataagaggataaaaataaaaatatcgcattggaaaatggtgaaaagtaataaatttaacatttt 33864391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 44299658 - 44299754
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||| ||||||  |||||||||||| |||| ||||| ||||||||||||||| | | ||||||||||||| ||||||||||||| ||||    
T  44299658 ggagaatgctaatcattgcttttggggcattgggtaagaggataaaaatagaaatatagcctcgaaaaatggtgaaaagtgataaatttaacatttt 44299754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 171 - 269
Target Start/End: Original strand, 17095042 - 17095139
Alignment:
Q  171 taggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||||  ||| ||||||||||||| |||||| ||||||||||||| | |   ||||||||||||| ||||||||||||||||||    
T  17095042 taggagaatgctaaccattgttcttagggcattggataaagggataaaaatagaaatataac-tctaaaaatggtgaaaagtgataaatttaacttttt 17095139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 269
Target Start/End: Complemental strand, 44173252 - 44173155
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||||   ||||| |||| |||||   |||| ||||||||||||||||||| |||||| ||||||||||||||||||| |||||    
T  44173252 aggagaatgctaaccattgtttttgggacatttgataatatgataaaaatagaaatatagcattgaaaaatgatgaaaaatgataaatttaatttttt 44173155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 132
Target Start/End: Complemental strand, 9215122 - 9215041
Alignment:
Q  51 tgtttactttccaagtaaaccataatattgtttcgggtcttaagtacaccaacactgtctggaaaactggcatcaagggtaa 132  Q
    |||| |||||||| || |||||||| |||||||| ||||| ||||||||||||||||| ||||||||||| ||||| |||||    
T  9215122 tgttcactttccaggtcaaccataacattgtttcaggtctcaagtacaccaacactgtgtggaaaactggtatcaaaggtaa 9215041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 269
Target Start/End: Original strand, 17118377 - 17118446
Alignment:
Q  200 cattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||| |||||| |||||||||||||  | ||||||||| |||||||||||||||||||||||||    
T  17118377 cattggataaagggataaaaatagaaatataatactggaaaatgttgaaaaatgataaatttaacttttt 17118446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 269
Target Start/End: Complemental strand, 41436611 - 41436514
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||| |||||||||  ||||||  |||| ||||||||||| ||||| |||||||| |||| |||||| |||||| ||||||| ||||||||||    
T  41436611 aggagaatggtaaccattgttcttgggatattgaataaggggataaaaataaaaatatagtattgaaaaatgatgaaaagtgataaacttaacttttt 41436514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 11445313 - 11445364
Alignment:
Q  218 aaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  11445313 aaatagaaatataacattgaaaaatggtgaaaaatgataaatttaacttttt 11445364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 269
Target Start/End: Original strand, 23685638 - 23685725
Alignment:
Q  171 taggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||| |||||||||||||||||||||||||||| |||||| ||||           |||||||||||| ||||| ||||||||||||||||||    
T  23685638 taggagaatgttaaccattgcccttggggcattggataaagggataaaaat-----------attggaaaatggggaaaagtgataaatttaacttttt 23685725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 43140328 - 43140396
Alignment:
Q  201 attggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||| ||||| ||||| ||||||| ||||| ||||||  ||||||||||||||||||||||||    
T  43140328 attggataagaggataaaaataaaaatataacattgaaaaatgacgaaaaatgataaatttaacttttt 43140396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 269
Target Start/End: Complemental strand, 464927 - 464831
Alignment:
Q  174 gagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggt-gaaaaatgataaatttaacttttt 269  Q
    ||||||| ||| ||||| | |||| | ||| ||||| |||||| ||||||||||||| ||||| ||||||||  ||||||||||| |||||||||||    
T  464927 gagaatgttaatcattgtctttggagtatttgataaagggataaaaatagaaatataacattgaaaaatggtaaaaaaatgataattttaacttttt 464831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 9201485 - 9201568
Alignment:
Q  186 cattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||| ||||| | |||||||||| | |||| |||||| ||||||  |||  ||||||||||||| ||||||||||||||||||    
T  9201485 cattgtccttgagacattggataatgagataaaaataggaatataatattaaaaaatggtgaaaagtgataaatttaacttttt 9201568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 9991421 - 9991487
Alignment:
Q  177 aatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatg 243  Q
    ||||||||||||||||||||||||||||||||| |  | | |||||||||| | | |||||||||||    
T  9991421 aatgctaaccattgcccttggggcattggataaagaaacaaaaatagaaattttgtattggaaaatg 9991487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 269
Target Start/End: Complemental strand, 2239687 - 2239618
Alignment:
Q  200 cattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||| |||| ||||| | |||||||||| ||| || |||||||| ||||||||| |||||||||||||    
T  2239687 cattggttaagaggataaagatagaaatattgcaatgaaaaatggtaaaaaatgatgaatttaacttttt 2239618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 4023398 - 4023355
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggata 216  Q
    |||||||| ||||||||| ||||||||||||| |||||||||||    
T  4023398 ggagaatgttaaccattgtccttggggcattgaataaggggata 4023355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 269
Target Start/End: Original strand, 34334167 - 34334234
Alignment:
Q  202 ttggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||  |||| |||||||||||| | ||| ||||||||| |||||||| ||||| ||||||||    
T  34334167 ttggataagatgataaaaatagaaatattgtatttgaaaatggtaaaaaatgacaaattaaacttttt 34334234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 37230306 - 37230256
Alignment:
Q  219 aatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||| | |||| ||||||||||||| ||||||| ||||||||||    
T  37230306 aatagaaatattgtattgaaaaatggtgaaaagtgataaacttaacttttt 37230256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 205
Target Start/End: Complemental strand, 8033410 - 8033381
Alignment:
Q  176 gaatgctaaccattgcccttggggcattgg 205  Q
    ||||||||||||||||||||||||||||||    
T  8033410 gaatgctaaccattgcccttggggcattgg 8033381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 11659378 - 11659298
Alignment:
Q  189 tgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||| ||||| | |||| ||||| ||||| |||||| | |||| ||||| ||||||| |||  |||||||||||||    
T  11659378 tgcccttggagcattcgttaagaggataaaaataaaaatattgtattgaaaaatagtgaaaagtgaagaatttaacttttt 11659298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 3e-38; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 177 - 269
Target Start/End: Original strand, 35653236 - 35653328
Alignment:
Q  177 aatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  35653236 aatgctaaccattgcccttggtgcattggataaggggataaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaacttttt 35653328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 174 - 269
Target Start/End: Original strand, 4421942 - 4422037
Alignment:
Q  174 gagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||| |||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4421942 gagaatgttaaccattgcccttagggcattggataagaggataaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaacttttt 4422037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 174 - 269
Target Start/End: Complemental strand, 39568034 - 39567939
Alignment:
Q  174 gagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  39568034 gagaatgataaccattgcccttggggcattggataatgggataaaaatataaatatagcattggaaaatgatgaaaaatgataaatttaacttttt 39567939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 177 - 266
Target Start/End: Complemental strand, 15915960 - 15915871
Alignment:
Q  177 aatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaactt 266  Q
    ||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15915960 aatgctaaccattgcacttggggcattggataagggaataaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaactt 15915871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 168 - 269
Target Start/End: Original strand, 28143095 - 28143196
Alignment:
Q  168 gtttaggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttt 267  Q
    ||||| ||||||||||||||||||||||||| ||||| |||||| |||| ||||||||||||| |||||| |||||||||||||| ||||||||||||||    
T  28143095 gtttaagagaatgctaaccattgcccttgggacattgaataaggagataaaaatagaaatataacattgggaaatggtgaaaaataataaatttaacttt 28143194  T
Q  268 tt 269  Q
    ||    
T  28143195 tt 28143196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 43414040 - 43414137
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||  |||||||||||| ||  ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  43414040 aggagaatgctaagaattgcccttgggacaagggataaggggataaaaatagaaatatagcattggaaaatggtgaaaaatgatcaatttaacttttt 43414137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 16315510 - 16315597
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaat 259  Q
    |||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  16315510 aggagaatgctaaccactgccctttgggcatcggataaggggataaaaatagaaatatagcattggaaaatggtgaaaagtgataaat 16315597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 172 - 269
Target Start/End: Complemental strand, 5151622 - 5151525
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||| |||||||||||| | ||| |||||| |||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  5151622 aggagagtgctaaccattgtcattgaggcatttgataaggggataaaaatagaaatataacattggaaaatgatgaaaaatgataaatttaacttttt 5151525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 35945378 - 35945282
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||| |||||| ||||||| |||||||||||| ||| ||||||||||||| ||||||||||| ||||||| ||||||||||||||||||    
T  35945378 ggagaatgctaatcattgctcttggggtattggataagggaataaaaatagaaatataacattggaaaatagtgaaaagtgataaatttaacttttt 35945282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 174 - 269
Target Start/End: Complemental strand, 8410273 - 8410178
Alignment:
Q  174 gagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||| |||||||| ||| ||||||||| |||||||||||||||||||||||    
T  8410273 gagaatgctaaccattgcctttggggtattagataaggggataaaaataaaaatatagtattagaaaatggtaaaaaatgataaatttaacttttt 8410178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 25017283 - 25017364
Alignment:
Q  188 ttgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||| ||||||||||||||||||| |||||||||||||| |||||||||| ||||||| ||||||||||||||||||    
T  25017283 ttgcccttgaggcattggataaggggataaaaatagaaatatagtattggaaaattgtgaaaagtgataaatttaacttttt 25017364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 4962494 - 4962589
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||| ||||||||||||| |||||||||||| |||||| ||||||||||||||||||    
T  4962494 ggagaatgctacccattgcccttgggacattggataagga-ataaaaatagaaatataacattggaaaatgatgaaaagtgataaatttaacttttt 4962589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 199 - 269
Target Start/End: Complemental strand, 27823365 - 27823295
Alignment:
Q  199 gcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  27823365 gcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaagtgataaatttaacttttt 27823295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 171 - 269
Target Start/End: Complemental strand, 37243980 - 37243883
Alignment:
Q  171 taggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||| ||||||||||| |||||||||||| || ||| ||||| |||||||  |||||||||||||||||| ||||||||||||||||||    
T  37243980 taggagaatgctaatcattgcccttgaggcattggataaagg-ataaaaataaaaatataatattggaaaatggtgaaaagtgataaatttaacttttt 37243883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 1479112 - 1479209
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||   |||| ||||||| ||||||||||| ||||||||||||||||||| |||||  |||||| ||||||||||||||||||    
T  1479112 aggagaatgctaaccattattcttgaggcattgaataaggggataaaaatagaaatatagcattgaaaaataatgaaaagtgataaatttaacttttt 1479209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 172 - 269
Target Start/End: Complemental strand, 34546911 - 34546814
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||| ||| ||||| |||||| | |||||||||||||||| ||||||||||||| ||||| ||||||||||||| |||||||||||| |||||    
T  34546911 aggagaatgataatcattgtccttggagtattggataaggggataaaaatagaaatataacattgaaaaatggtgaaaagtgataaatttaatttttt 34546814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 171 - 269
Target Start/End: Original strand, 338739 - 338837
Alignment:
Q  171 taggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||| ||||| ||||||   |||| |||||| | |||| ||||||||||||||||||    
T  338739 taggagaatcctaaccattgcccttggggcattggataaagggataaaaataaaaatatgatattgaaaaatgataaaaagtgataaatttaacttttt 338837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 3639051 - 3639148
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||| ||||||||||||||  |||| | ||||| ||||||||||| ||||||||||||| ||||||||||||||||| | |||||||||||| |||||    
T  3639051 aggacaatgctaaccattgttcttgagacattgaataaggggataaaaatagaaatataacattggaaaatggtgaagagtgataaatttaatttttt 3639148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 269
Target Start/End: Complemental strand, 1759929 - 1759853
Alignment:
Q  193 cttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||| ||||| |||||||||||||| |||| ||||||| ||||| ||||||||||||||||||    
T  1759929 cttggggcattggataagaggataaaaatagaaatatagtattgaaaaatggagaaaagtgataaatttaacttttt 1759853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 12068151 - 12068247
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||  ||||||||| |||  || |||||||| |||  ||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  12068151 ggagaatattaaccattgtcctcaggacattggatgaggatataaaaatagaaatatagtattggaaaatggtgaaaagtgataaatttaacttttt 12068247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 40099467 - 40099368
Alignment:
Q  169 tttaggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattg-gaaaatggtgaaaaatgataaatttaacttt 267  Q
    ||||| |||||| ||||||||| ||||| ||||||||||||||||  | ||||| |||||||||||||  ||||||||||||| ||||||||||||| ||    
T  40099467 tttagaagaatgttaaccattgtccttgtggcattggataagggg--aaaaataaaaatatagcattgaaaaaatggtgaaaagtgataaatttaacctt 40099370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 25568267 - 25568365
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataa-ggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||| | |||| ||||| |||| || ||||||||| ||||||| ||||| ||||||||||||| |||||| |||||| ||||| ||||||||||||    
T  25568267 aggagaaagttaactattgctcttgaggtattggataaaggggataaaaatataaatatagcattgaaaaatgatgaaaagtgatacatttaacttttt 25568365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 104904 - 104976
Alignment:
Q  171 taggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatg 243  Q
    ||||||||||||||||||||| ||||||| ||||||||||||  || |||||||||||||  ||| |||||||    
T  104904 taggagaatgctaaccattgctcttggggtattggataagggagtaaaaatagaaatataatattagaaaatg 104976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 12914261 - 12914211
Alignment:
Q  219 aatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| |||||    
T  12914261 aatagaaatatagcattgaaaaatggtgaaaagtgataaatttaatttttt 12914211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 13951258 - 13951302
Alignment:
Q  218 aaatagaaatatagcattggaaaatggtgaaaaatgataaattta 262  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||    
T  13951258 aaatagaaatatagcattgaaaaatggtgaaaagtgataaattta 13951302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 269
Target Start/End: Complemental strand, 17168783 - 17168712
Alignment:
Q  198 ggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||| ||||  |||| |||||||||||| |||||| |||| ||||||||||||| ||||| |||||||    
T  17168783 ggcattggttaagaagatacaaatagaaatattgcattgaaaaacggtgaaaaatgatgaatttgacttttt 17168712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 259
Target Start/End: Original strand, 10017600 - 10017684
Alignment:
Q  174 gagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaat 259  Q
    ||||||| ||||||||| ||| | | |||| |||||| ||||| |||||||||||||| | ||| |||||||||||| ||||||||    
T  10017600 gagaatgttaaccattgtcctagagacatttgataagaggataaaaatagaaatatagtactgg-aaatggtgaaaattgataaat 10017684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 10406903 - 10406823
Alignment:
Q  189 tgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||| || ||||||||||  | |||| ||||||||||| | |||| ||||||| ||||| |||||||||||| |||||    
T  10406903 tgcccttaggacattggataaaagaataggaatagaaatattgtattgaaaaatggagaaaagtgataaatttaatttttt 10406823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 205
Target Start/End: Original strand, 7736271 - 7736303
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattgg 205  Q
    |||||||||||||||||||||||||| ||||||    
T  7736271 ggagaatgctaaccattgcccttgggacattgg 7736303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 269
Target Start/End: Original strand, 28599691 - 28599727
Alignment:
Q  233 attggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||| |||||||||||||||||| |||||||    
T  28599691 attggaaaatagtgaaaaatgataaatttgacttttt 28599727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 39693090 - 39693046
Alignment:
Q  225 aatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||| ||| |||| |||||||||||||||| ||||||    
T  39693090 aatatagcattgaaaagtggtaaaaaatgataaatttatcttttt 39693046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 174 - 269
Target Start/End: Complemental strand, 40763380 - 40763285
Alignment:
Q  174 gagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||| ||||||||||||||||||    
T  40763380 gagaatgctaaccattgcccttggggcattggataaggggataaaaatagaaatataacattgaaaaatggtgaaaagtgataaatttaacttttt 40763285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 171 - 269
Target Start/End: Complemental strand, 29034821 - 29034723
Alignment:
Q  171 taggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||| |||||||||||||||||| ||||||||||||||||||    
T  29034821 taggagaatgctaaccattgtccttgaggcattggataaggggataaaaatataaatatagtattggaaaatggtgaaaagtgataaatttaacttttt 29034723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 43567482 - 43567579
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||| ||||||||||||||||||||||||||||||||| |||| |||||||| ||||| |||||||||||||||||| ||||||||||||||||||    
T  43567482 aggagattgctaaccattgcccttggggcattggataaggagataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaacttttt 43567579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 48454799 - 48454895
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||| ||||||||||||||||||    
T  48454799 ggagaatgttaaccattacccttggggcattggataaggggataaaaatagaaatataacattgggaaatggtgaaaagtgataaatttaacttttt 48454895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 172 - 269
Target Start/End: Complemental strand, 36279252 - 36279155
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||| | |||||||||||||||||  ||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  36279252 aggagaatgctaaccattactcttggggcattggataataggataaaaatataaatatagcattggaaaatggtgaaaagtgataaatttaacttttt 36279155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 174 - 269
Target Start/End: Original strand, 5240310 - 5240405
Alignment:
Q  174 gagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||| ||||| |||||||||||| |||||| |||||||||||||| |||| ||||||||||||| ||||||||||||||||||    
T  5240310 gagaatgctaaccattgtccttgaggcattggataaagggataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatttaacttttt 5240405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 171 - 269
Target Start/End: Original strand, 5347947 - 5348045
Alignment:
Q  171 taggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||| ||||| |||||||| ||||||| ||| ||||||||||||| |||||||||||| |||||| ||||||||||||||||||    
T  5347947 taggagaatgctaaccattacccttagggcattgaataagggaatataaatagaaatataacattggaaaatgatgaaaagtgataaatttaacttttt 5348045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 175 - 269
Target Start/End: Complemental strand, 8380571 - 8380477
Alignment:
Q  175 agaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||| ||||||| |||||||||| |||||||||||||||| ||||| |||||||||||||||||||| |||||| ||||||||||||||||||    
T  8380571 agaatgttaaccatggcccttggggtattggataaggggataaaaataaaaatatagcattggaaaatgatgaaaagtgataaatttaacttttt 8380477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 171 - 269
Target Start/End: Original strand, 24359683 - 24359781
Alignment:
Q  171 taggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||| |||||||||||||| ||| |||||||||||||||| |||||||||||||||| ||||||||||| ||||  |||||||||||||||||    
T  24359683 taggagaatgttaaccattgcccttcgggtattggataaggggataaaaatagaaatatagcaatggaaaatggtaaaaagggataaatttaacttttt 24359781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 167 - 269
Target Start/End: Original strand, 30538451 - 30538553
Alignment:
Q  167 agtttaggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaactt 266  Q
    ||||| |||||||||||| ||||| ||||||| |||| |||||||||||| |||||||||||||| ||| |||||| |||||||||||||||||||||||    
T  30538451 agttttggagaatgctaatcattgtccttgggacattagataaggggataaaaatagaaatatagtattagaaaatagtgaaaaatgataaatttaactt 30538550  T
Q  267 ttt 269  Q
    |||    
T  30538551 ttt 30538553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 174 - 269
Target Start/End: Complemental strand, 1910374 - 1910280
Alignment:
Q  174 gagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||| |||||||||| ||||||| |||||||| ||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  1910374 gagaatgctaatcattgcccttagggcatttgataaggg-ataaaaatagaaatataacattagaaaatggtgaaaaatgataaatttaacttttt 1910280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 269
Target Start/End: Original strand, 27053468 - 27053566
Alignment:
Q  171 taggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||| |||| ||||| |||| ||||||||||||| |||||| |||||||||||||||||  |||||||||||||| ||||||||||||||||||    
T  27053468 taggagaatactaatcattgtccttagggcattggataaagggataaaaatagaaatatagcatcagaaaatggtgaaaagtgataaatttaacttttt 27053566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 261
Target Start/End: Complemental strand, 8292877 - 8292789
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaattt 261  Q
    |||||||||||| ||||| | |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||    
T  8292877 ggagaatgctaatcattgtctttggagcattggataaggggataaaaatagaaatatagcattggaaaatggtgaaaagttataaattt 8292789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 22707180 - 22707085
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||||| ||||||||||| |||| || ||| |||||||||||||||||||||||||  ||||||||||||||||| |||||||    
T  22707180 ggagaatgctaaccattgcctttggggcattgaataaagg-ataaaaatagaaatatagcattggaaaataatgaaaaatgataaattttacttttt 22707085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 7322930 - 7323026
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||||||||| |  |||||||||| ||||| ||||||||||||| | ||| ||||||||||||| |||||||||||| |||||    
T  7322930 ggagaatgctaaccattgcccttgagatattggataagaggataaaaatagaaatataaccttgaaaaatggtgaaaagtgataaatttaatttttt 7323026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 177 - 269
Target Start/End: Original strand, 43958064 - 43958156
Alignment:
Q  177 aatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||| |  |||||||||||| |||| |||||||||||||| ||| |||||| |||||||||||||||||||| |||||    
T  43958064 aatgctaaccattgcccttagaccattggataaggcgataaaaatagaaatatagtattagaaaattgtgaaaaatgataaatttaatttttt 43958156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 269
Target Start/End: Original strand, 40066915 - 40066990
Alignment:
Q  194 ttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||| |||||||||||||||||| |||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  40066915 ttggtgcattggataaggggataaaaatagaaatataatattgaaaaatggtgaaaaatgataaatttaacttttt 40066990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 42222353 - 42222257
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||| |||| | ||| ||| || |||| |||||||||||| |||||||||||| | |||||||||||||||||| ||||||||||||||||||    
T  42222353 ggagaatgataactactgctcttaggacattagataaggggataaaaatagaaatatggtattggaaaatggtgaaaagtgataaatttaacttttt 42222257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 174 - 269
Target Start/End: Original strand, 8258621 - 8258711
Alignment:
Q  174 gagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||| |||| |||||||||||||||| ||||||||||||| ||||||||||||     || ||||||||||||| ||||||||||||||||||    
T  8258621 gagaatgttaactattgcccttggggcatcggataaggggataaaaatagaaatat-----tgaaaaatggtgaaaagtgataaatttaacttttt 8258711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 46478535 - 46478628
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||| ||||||||||    ||||||||||||||||| ||||||||||||| ||||| ||||| ||| ||||||||||||||||||||||    
T  46478535 aggagaatgctaatcattgccctta---cattggataaggggataaaaatagaaatatatcattgaaaaatagtg-aaaatgataaatttaacttttt 46478628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 41188785 - 41188859
Alignment:
Q  195 tggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||| |||||| ||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||||||    
T  41188785 tggggcatttgataagaggataaaaatataaatatagcattggaaaatggtgaaaggtgataaatttaacttttt 41188859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 269
Target Start/End: Complemental strand, 3681797 - 3681730
Alignment:
Q  202 ttggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||| ||||| ||||| | ||||||||||||||||||| ||||||||||||||||||    
T  3681797 ttggataaggggataaaaataaaaatacaacattggaaaatggtgaaaagtgataaatttaacttttt 3681730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 269
Target Start/End: Complemental strand, 49069666 - 49069591
Alignment:
Q  194 ttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||  |||| |||||||||||||| |||| ||||||||||||| |||||||| |||||||||    
T  49069666 ttggggcattggataagaagataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatctaacttttt 49069591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 266
Target Start/End: Complemental strand, 22521694 - 22521625
Alignment:
Q  197 gggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaactt 266  Q
    |||||||||||||| ||||| || ||||||||||||||||||||||| ||| || |||||||||||||||    
T  22521694 gggcattggataagaggataaaactagaaatatagcattggaaaatgatgagaagtgataaatttaactt 22521625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 3720131 - 3720187
Alignment:
Q  213 gatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||| |||||| ||||| ||||||  |||||||| ||||||||||||||||||||||    
T  3720131 gataaaaatagtaatattgcattgacaaatggtgtaaaatgataaatttaacttttt 3720187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 269
Target Start/End: Original strand, 30388697 - 30388733
Alignment:
Q  233 attggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||| ||||||||||||||||||||||||||||||||    
T  30388697 attgaaaaatggtgaaaaatgataaatttaacttttt 30388733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 40774259 - 40774315
Alignment:
Q  213 gatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||| |||||||||||| |||||| |||||| |||||| |||| |||||||||||||    
T  40774259 gatacaaatagaaatattgcattgaaaaatgatgaaaattgatgaatttaacttttt 40774315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 32204269 - 32204218
Alignment:
Q  218 aaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||| |||||| |||||| |||||| |||| |||||||||||||    
T  32204269 aaatagaaatattgcattgaaaaatgatgaaaagtgatgaatttaacttttt 32204218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 46042834 - 46042784
Alignment:
Q  218 aaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||| |||| ||||||||||||| | ||||||||||||||||    
T  46042834 aaatagaaatatagtattg-aaaatggtgaaaagttataaatttaacttttt 46042784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 31360309 - 31360363
Alignment:
Q  213 gatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttt 267  Q
    |||| |||||||||||| | ||||| ||||||| |||| ||||||||||||||||    
T  31360309 gataaaaatagaaatattgtattgggaaatggtaaaaagtgataaatttaacttt 31360363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 44207764 - 44207714
Alignment:
Q  177 aatgctaaccattgcccttggggcattggataaggggatagaaatagaaat 227  Q
    |||||||||||||||||||| |||||||||||| || | | ||||||||||    
T  44207764 aatgctaaccattgcccttgtggcattggataaaggaacaaaaatagaaat 44207714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 675090 - 675122
Alignment:
Q  177 aatgctaaccattgcccttggggcattggataa 209  Q
    ||||||||||||||||||| |||||||||||||    
T  675090 aatgctaaccattgccctttgggcattggataa 675122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 5e-34; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 29915551 - 29915648
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||| ||||||||||||| |||||| ||||||||||||||||    
T  29915551 aggagaatgctaaccattgcccttggggcgttggataaggggataaaaataaaaatatagtattggaaaatggtaaaaaattataaatttaacttttt 29915648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 29964704 - 29964801
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||| ||||||||||||| |||||| ||||||||||||||||    
T  29964704 aggagaatgctaaccattgcccttggggcgttggataaggggataaaaataaaaatatagtattggaaaatggtaaaaaattataaatttaacttttt 29964801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 8715479 - 8715574
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||| |||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8715479 ggagaatgctaaccattgtccttagggcattggataagggg-taaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaacttttt 8715574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 9067366 - 9067461
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||| |||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9067366 ggagaatgctaaccattgtccttagggcattggataagggg-taaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaacttttt 9067461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 36730126 - 36730226
Alignment:
Q  169 tttaggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaactttt 268  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||| ||||| |||||||| |||| ||||||||||||| |||||||||||||||||    
T  36730126 tttaggagaatgctaaccattgcccttatggcattggataaggggataaaaatataaatatagtattgaaaaatggtgaaaagtgataaatttaactttt 36730225  T
Q  269 t 269  Q
    |    
T  36730226 t 36730226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 4759827 - 4759923
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||||  |||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  4759827 ggagaatgctaaccattgcatttggagcattggataaagggataaaaatagaaatatagcattgaaaaatggtgaaaagtgataaatttaacttttt 4759923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 44570363 - 44570459
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||||||||||||||| ||||| |||||  ||||||||||||| ||||||||||||||||||| |||||| |||||||||||    
T  44570363 ggagaatgctaaccattgcccttggggcattcgataaagggatcaaaatagaaatataacattggaaaatggtgaaaagtgataactttaacttttt 44570459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 174 - 269
Target Start/End: Complemental strand, 37509242 - 37509147
Alignment:
Q  174 gagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||| |||||  ||||||||||||| ||||||| ||||||||||||||||||    
T  37509242 gagaatgctaaccattgcctttggggcattggataaggggataaaaattgaaatgcagcattggaaaatagtgaaaagtgataaatttaacttttt 37509147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 175 - 269
Target Start/End: Complemental strand, 35306462 - 35306368
Alignment:
Q  175 agaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||| ||||||||||||||||||  |||||||||||||||| ||||||||||||| |||||||||||| |||||| ||||||||||||||||||    
T  35306462 agaatactaaccattgcccttgggcaattggataaggggataaaaatagaaatataacattggaaaatgatgaaaagtgataaatttaacttttt 35306368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 176 - 269
Target Start/End: Complemental strand, 46317615 - 46317522
Alignment:
Q  176 gaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||||| | |||||||||||  |||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  46317615 gaatgctaaccattgcccttgagacattggataagtagataaaaatagaaatataacattggaaaatgatgaaaaatgataaatttaacttttt 46317522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 172 - 260
Target Start/End: Original strand, 25102298 - 25102386
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatt 260  Q
    ||||||||||||||||||||||||||| |||||||||| | |||| |||||||||||||||||||||||||||| |||| |||||||||    
T  25102298 aggagaatgctaaccattgcccttgggacattggataatgagataaaaatagaaatatagcattggaaaatggtaaaaagtgataaatt 25102386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 1804020 - 1803926
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttt 267  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||  |||| |||| ||| |||||||||||||||||||||    
T  1804020 ggagaatgctaatcattgtccttggggcattggataaggggataaaaatagaaatatattattgaaaaagggtaaaaaatgataaatttaacttt 1803926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 172 - 269
Target Start/End: Complemental strand, 32415702 - 32415605
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||| ||| ||||||||||| |||||||||||| |||||| ||||||||||||||||||| ||||| ||||||| | ||||||||||||||||    
T  32415702 aggagaatgttaatcattgcccttgaggcattggataaagggataaaaatagaaatatagcattgaaaaattgtgaaaagtcataaatttaacttttt 32415605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 44695648 - 44695744
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||| ||||| | ||||| ||||||||||||||||| ||||| |||||||   ||||||||||||||||||||||||||||||||||||    
T  44695648 ggagaatgctaatcattgtcattgggacattggataaggggataaaaatataaatataatcttggaaaatggtgaaaaatgataaatttaacttttt 44695744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 172 - 264
Target Start/End: Original strand, 48136699 - 48136790
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaac 264  Q
    ||||||||||||||||||| |||||||| |||||||||||| ||| ||||||||||||||||||||||||| ||| ||| |||||||||||||    
T  48136699 aggagaatgctaaccattgtccttggggtattggataagggaataaaaatagaaatatagcattggaaaattgtg-aaagtgataaatttaac 48136790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 8847429 - 8847525
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||| | | |||||| |||||| ||||||||||||||||| ||||||||||||| |||||||||||||| |||| |||| |||||||||||||    
T  8847429 ggagaatgtttatcattgcacttgggacattggataaggggataaaaatagaaatataacattggaaaatggtaaaaagtgattaatttaacttttt 8847525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 176 - 269
Target Start/End: Complemental strand, 10854992 - 10854895
Alignment:
Q  176 gaatgctaaccattgcccttggggcattggataaggggatagaaa----tagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||| ||| |||||||||||||||||||||||||||||| || |    |||||||||||||||||||||||||||||| | ||||||||||||||||    
T  10854992 gaatgttaatcattgcccttggggcattggataaggggatggataaaagtagaaatatagcattggaaaatggtgaaaactaataaatttaacttttt 10854895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 192 - 269
Target Start/End: Original strand, 51817308 - 51817385
Alignment:
Q  192 ccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||| |||||||| ||||| ||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  51817308 cctttgggcattgaataagaggataaaaataaaaatatagcattggaaaatggtgaaaagtgataaatttaacttttt 51817385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 12905260 - 12905355
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||| |||| |||||| ||||   ||| |||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||| ||||    
T  12905260 ggagaatgttaactattgcctttggaatattagataaggggataaaaatagaaatataacattg-aaaatggtgaaaaatgataaatttaacatttt 12905355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 231
Target Start/End: Complemental strand, 41346407 - 41346348
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatag 231  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  41346407 aggagaatgttaaccattgtccttggggcattggataaggggataaaaatagaaatatag 41346348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 18780 - 18860
Alignment:
Q  189 tgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||| ||||||||| |||| ||||| |||||||||||| ||||||| ||| |||||||| |||| |||||||||||||    
T  18780 tgcccttagggcattggttaagaggataaaaatagaaatattgcattgggaaacggtgaaaagtgatgaatttaacttttt 18860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 12051142 - 12051074
Alignment:
Q  201 attggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||  ||| |||||||||||||| |||| |||||  |||||||||||||||||||||||||    
T  12051142 attggataaggaaataaaaatagaaatatagtattgtaaaataatgaaaaatgataaatttaacttttt 12051074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 31647424 - 31647356
Alignment:
Q  175 agaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatg 243  Q
    |||||||||||||||| |||| || ||||| ||||||||||| ||||| ||||||||||||| ||||||    
T  31647424 agaatgctaaccattgtccttcggacattgaataaggggataaaaatataaatatagcattgaaaaatg 31647356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 52570869 - 52570818
Alignment:
Q  218 aaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||| |||||||||||||||||| |||||||| |||||||||    
T  52570869 aaatagaaatatagtattggaaaatggtgaaaagtgataaatataacttttt 52570818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 266
Target Start/End: Original strand, 20227405 - 20227450
Alignment:
Q  221 tagaaatatagcattggaaaatggtgaaaaatgataaatttaactt 266  Q
    |||||||||||||||| |||||| |||||| |||||||||||||||    
T  20227405 tagaaatatagcattgaaaaatgatgaaaagtgataaatttaactt 20227450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 45899540 - 45899617
Alignment:
Q  193 cttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaa-tgataaatttaacttttt 269  Q
    |||||||||||||||||| | ||| ||||||||||||   ||||||||||| ||||||| |||| ||||||| |||||    
T  45899540 cttggggcattggataagagaataaaaatagaaatattatattggaaaatgatgaaaaagtgatgaatttaaattttt 45899617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 18950 - 19001
Alignment:
Q  218 aaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||| ||||||| ||| |||||||| |||| |||||||||||||    
T  18950 aaatagaaatattgcattgggaaacggtgaaaagtgatgaatttaacttttt 19001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 269
Target Start/End: Original strand, 13647047 - 13647109
Alignment:
Q  207 taaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||| ||||| |||||||||||| | |||| ||||| ||||||| |||| |||||||||||||    
T  13647047 taagaggataaaaatagaaatattggattgaaaaatagtgaaaagtgatgaatttaacttttt 13647109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 269
Target Start/End: Complemental strand, 39436563 - 39436501
Alignment:
Q  207 taaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||| ||||| |||||||||||| | |||| ||||||||||||||| |  |||||||||||||    
T  39436563 taagaggataaaaatagaaatattgtattgaaaaatggtgaaaaataaagaatttaacttttt 39436501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 46055754 - 46055804
Alignment:
Q  177 aatgctaaccattgcccttggggcattggataaggggatagaaatagaaat 227  Q
    ||||||||||||||||||||| ||||||||||| || | | ||||||||||    
T  46055754 aatgctaaccattgcccttggagcattggataaaggaacaaaaatagaaat 46055804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 205
Target Start/End: Complemental strand, 4195473 - 4195441
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattgg 205  Q
    ||||||||||||||||||| |||||||||||||    
T  4195473 ggagaatgctaaccattgctcttggggcattgg 4195441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 44019116 - 44019172
Alignment:
Q  192 ccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaa 248  Q
    |||||| |||||| ||||||||||| ||||| ||||||| ||||  |||||||||||    
T  44019116 ccttggagcattgaataaggggataaaaatataaatatatcattaaaaaatggtgaa 44019172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 70; Significance: 1e-31; HSPs: 3)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 16748 - 16844
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||| |||||||||    
T  16748 aggagaatgctaaccattgcccatagggcattggataaggggataaaaatagaaatatagcatt-gaaaatagtgaaaaatgataaatgtaacttttt 16844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 26916 - 27012
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||| |||||||||    
T  26916 aggagaatgctaaccattgcccatagggcattggataaggggataaaaatagaaatatagcatt-gaaaatagtgaaaaatgataaatgtaacttttt 27012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 37082 - 37178
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||| |||||||||    
T  37082 aggagaatgctaaccattgcccatagggcattggataaggggataaaaatagaaatatagcatt-gaaaatagtgaaaaatgataaatgtaacttttt 37178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 5e-31; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 29692318 - 29692414
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||| ||||||||||||||||||||||||  ||||| |||||||||||||| |||| ||||||||||||| ||||||||||||||||||    
T  29692318 ggagaatgctaatcattgcccttggggcattggataaatggataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatttaacttttt 29692414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 175 - 269
Target Start/End: Complemental strand, 10855562 - 10855468
Alignment:
Q  175 agaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||| |||||||||||| |||||||||||| |||||||||||||  |||| |||||| |||||| ||||||||||||||||||    
T  10855562 agaatgctaaccattgtccttggggcatttgataaggggataaaaatagaaatataatattgaaaaatgatgaaaagtgataaatttaacttttt 10855468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 173 - 262
Target Start/End: Complemental strand, 32786347 - 32786259
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaattta 262  Q
    ||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| |||||||||||||||||||  ||||||||||    
T  32786347 ggagaatgctaaccattgcccttggggtattggataaggg-ataaaaatagaaatataacattggaaaatggtgaaaagagataaattta 32786259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 172 - 269
Target Start/End: Complemental strand, 5578407 - 5578310
Alignment:
Q  172 aggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||| |||| |||||||||| |||||||||| |||||||| ||||||||||||||||||| |||||  ||| || ||||||||||||||||||    
T  5578407 aggagaatgataactattgcccttgaggcattggatgaggggataaaaatagaaatatagcattgaaaaataatgagaattgataaatttaacttttt 5578310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 269
Target Start/End: Complemental strand, 6867026 - 6866951
Alignment:
Q  194 ttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||| ||||||||||||| ||||    
T  6867026 ttggggcattggataaggggataaaaataaaaatatagcatttgaaaatggtgaaaagtgataaatttaacctttt 6866951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 174 - 269
Target Start/End: Complemental strand, 12191624 - 12191529
Alignment:
Q  174 gagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||| ||||| ||||||  |||| |||||||||||| ||||| |||||||||||||||||||| |||||||||||| |||||||||||| |||||    
T  12191624 gagaacgctaatcattgcgtttggcgcattggataagtggataaaaatagaaatatagcattggtaaatggtgaaaagtgataaatttaatttttt 12191529  T

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Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 16437568 - 16437644
Alignment:
Q  174 gagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaa 250  Q
    |||||||||||||||||| |||  ||||||||||||| ||||| ||||||||||||| |||||||||||||||||||    
T  16437568 gagaatgctaaccattgctcttaaggcattggataagtggataaaaatagaaatataacattggaaaatggtgaaaa 16437644  T

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Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 263
Target Start/End: Original strand, 26572059 - 26572144
Alignment:
Q  173 ggagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaa 263  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||     ||||||| | |||| ||||||||||||    
T  26572059 ggagaatgctaaccattgtccttggggcattggataaggggataaaaatagaaatatag-----gaaaatgataaaaagtgataaatttaa 26572144  T

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Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 177 - 269
Target Start/End: Original strand, 8324085 - 8324177
Alignment:
Q  177 aatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||   |||||||||||| |||||  |||| ||||||||| |||||||||  |||| ||||||||||||||||||||||||||    
T  8324085 aatgctaaccattattcttggggcattgaataagaagataaaaatagaaacatagcattgagaaattgtgaaaaatgataaatttaacttttt 8324177  T

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Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 269
Target Start/End: Original strand, 7274192 - 7274287
Alignment:
Q  174 gagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||| ||||||||| | ||||| ||||||| ||||| ||| | ||||||||||| ||||||||||||  ||||| ||||||||||||| ||||    
T  7274192 gagaatgttaaccattgtctttgggacattggacaagggaataaatatagaaatataacattggaaaatgacgaaaagtgataaatttaacatttt 7274287  T

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Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 7875203 - 7875254
Alignment:
Q  218 aaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  7875203 aaatagaaatatagcattggaaaatgatgaaaagtgataaatttaacttttt 7875254  T

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Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 7880449 - 7880500
Alignment:
Q  218 aaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||||||||||||||||| ||||||| |||||| ||||||||||||||||||    
T  7880449 aaatagaaatatagcattagaaaatgatgaaaagtgataaatttaacttttt 7880500  T

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Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 269
Target Start/End: Original strand, 31220325 - 31220400
Alignment:
Q  194 ttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||||| |||| ||||| ||||||| |  ||| |||||||| |||| |||| |||||||||||||    
T  31220325 ttggggcattggataagaggatggaaatggaaatatcgttttgaaaaatggtaaaaagtgatgaatttaacttttt 31220400  T

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Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 27127524 - 27127580
Alignment:
Q  213 gatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    |||| |||||||||||| | ||||  ||||||||||||||||| |||||||||||||    
T  27127524 gataaaaatagaaatattgtattgagaaatggtgaaaaatgatgaatttaacttttt 27127580  T

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Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 269
Target Start/End: Complemental strand, 12175685 - 12175595
Alignment:
Q  174 gagaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||| |||||| |||| || ||||||     ||||| ||||| |||||||| |||| |||||| | |||| ||||||||||||||||||    
T  12175685 gagaatgctaatcattgctcttgaggtattgga-----ggataaaaatataaatatagtattgaaaaatgataaaaactgataaatttaacttttt 12175595  T

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Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 28014743 - 28014671
Alignment:
Q  197 gggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||| |||| || || || ||||||||| | ||||| ||||||||||||||||| | ||| |||||||    
T  28014743 gggcattggttaagagggtaaaattagaaatattgtattgggaaatggtgaaaaatgatgagtttgacttttt 28014671  T

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Target: scaffold0809 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 263
Target Start/End: Original strand, 4249 - 4337
Alignment:
Q  175 agaatgctaaccattgcccttggggcattggataaggggatagaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaa 263  Q
    |||||||||| ||||||  ||||| |||||||||  |||||| ||||| ||||||||||||||||||| ||||||| ||||||||||||    
T  4249 agaatgctaatcattgcttttgggacattggatagagggataaaaataaaaatatagcattggaaaattgtgaaaagtgataaatttaa 4337  T

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Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 269
Target Start/End: Original strand, 392114 - 392205
Alignment:
Q  182 taaccattgcccttggggcattggataaggggatagaaatagaaatat----agcattggaaaatggtgaaaaatgataaatttaacttttt 269  Q
    ||||||||||||||| || ||| ||||| |||||| || |||||||||    ||||||| |||||||| |||| ||||||||||||||||||    
T  392114 taaccattgcccttgaggaattagataaagggataaaattagaaatatatatagcattgaaaaatggtaaaaagtgataaatttaacttttt 392205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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