View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11861_low_25 (Length: 240)

Name: NF11861_low_25
Description: NF11861
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11861_low_25
NF11861_low_25
[»] chr1 (24 HSPs)
chr1 (69-222)||(46789843-46790000)
chr1 (16-55)||(29549418-29549457)
chr1 (16-55)||(41071935-41071974)
chr1 (19-55)||(22603548-22603584)
chr1 (16-55)||(15243085-15243124)
chr1 (14-55)||(13102316-13102357)
chr1 (19-55)||(32046876-32046912)
chr1 (16-55)||(7830031-7830070)
chr1 (16-55)||(9464103-9464142)
chr1 (16-55)||(9985427-9985466)
chr1 (16-55)||(12161814-12161853)
chr1 (16-55)||(14760867-14760906)
chr1 (16-55)||(20408260-20408299)
chr1 (16-55)||(22158802-22158841)
chr1 (16-55)||(23457897-23457936)
chr1 (16-55)||(52183678-52183717)
chr1 (16-45)||(4340417-4340446)
chr1 (18-55)||(12370043-12370080)
chr1 (16-45)||(41120837-41120866)
chr1 (16-45)||(46786058-46786087)
chr1 (19-55)||(9259286-9259322)
chr1 (27-55)||(17734065-17734093)
chr1 (19-55)||(22789694-22789730)
chr1 (19-55)||(38531273-38531309)
[»] scaffold0603 (1 HSPs)
scaffold0603 (16-55)||(6079-6118)
[»] scaffold0599 (1 HSPs)
scaffold0599 (16-55)||(7505-7544)
[»] chr8 (18 HSPs)
chr8 (16-55)||(3823131-3823170)
chr8 (16-55)||(40289520-40289559)
chr8 (16-55)||(43431659-43431698)
chr8 (18-55)||(21350476-21350513)
chr8 (19-55)||(6817052-6817088)
chr8 (19-55)||(8555407-8555443)
chr8 (20-55)||(5879202-5879237)
chr8 (16-55)||(9915140-9915179)
chr8 (16-55)||(17103965-17104004)
chr8 (16-55)||(17824716-17824755)
chr8 (20-55)||(19240865-19240900)
chr8 (20-55)||(19314049-19314084)
chr8 (20-55)||(32961657-32961692)
chr8 (16-45)||(5670269-5670298)
chr8 (16-45)||(11938753-11938782)
chr8 (16-45)||(19256220-19256249)
chr8 (16-45)||(24636660-24636689)
chr8 (16-52)||(29345072-29345108)
[»] chr7 (25 HSPs)
chr7 (16-55)||(10050936-10050975)
chr7 (16-55)||(31425611-31425650)
chr7 (16-51)||(1842898-1842933)
chr7 (20-55)||(9698642-9698677)
chr7 (16-55)||(18217829-18217868)
chr7 (16-55)||(21917434-21917473)
chr7 (16-55)||(23577289-23577328)
chr7 (16-55)||(23750836-23750875)
chr7 (16-55)||(45664768-45664807)
chr7 (18-55)||(24140450-24140487)
chr7 (16-55)||(11036507-11036546)
chr7 (16-55)||(20174020-20174059)
chr7 (16-55)||(20429465-20429504)
chr7 (16-55)||(22486394-22486433)
chr7 (16-55)||(22501594-22501633)
chr7 (16-55)||(37135385-37135424)
chr7 (16-55)||(39979724-39979763)
chr7 (16-55)||(40847535-40847574)
chr7 (18-55)||(687877-687914)
chr7 (16-45)||(21623031-21623060)
chr7 (14-55)||(23232039-23232080)
chr7 (19-55)||(6849314-6849350)
chr7 (19-55)||(21871572-21871608)
chr7 (19-55)||(24605838-24605874)
chr7 (16-52)||(32267350-32267386)
[»] chr6 (15 HSPs)
chr6 (16-55)||(25398002-25398041)
chr6 (16-55)||(28364911-28364950)
chr6 (18-55)||(15364560-15364597)
chr6 (19-55)||(495730-495766)
chr6 (16-55)||(343663-343702)
chr6 (16-55)||(9892963-9893002)
chr6 (16-55)||(21990274-21990313)
chr6 (16-55)||(12951708-12951747)
chr6 (16-55)||(14036620-14036659)
chr6 (16-55)||(21140939-21140978)
chr6 (16-55)||(22083838-22083877)
chr6 (16-55)||(22579449-22579488)
chr6 (16-55)||(27705422-27705461)
chr6 (16-55)||(30834060-30834099)
chr6 (16-45)||(15448395-15448424)
[»] chr5 (14 HSPs)
chr5 (16-55)||(23408980-23409019)
chr5 (18-55)||(12045727-12045764)
chr5 (16-55)||(7888797-7888836)
chr5 (16-55)||(8886951-8886990)
chr5 (16-55)||(36831990-36832029)
chr5 (16-52)||(25652683-25652719)
chr5 (16-55)||(13974178-13974217)
chr5 (16-55)||(17039731-17039770)
chr5 (16-55)||(23975635-23975674)
chr5 (16-55)||(33818661-33818700)
chr5 (14-55)||(18413556-18413597)
chr5 (14-55)||(33816856-33816897)
chr5 (19-55)||(7003831-7003867)
chr5 (19-55)||(20959508-20959544)
[»] chr4 (20 HSPs)
chr4 (16-55)||(32175837-32175876)
chr4 (16-55)||(45532679-45532718)
chr4 (16-55)||(55309313-55309352)
chr4 (16-55)||(5473847-5473886)
chr4 (20-55)||(13565019-13565054)
chr4 (16-55)||(22128412-22128451)
chr4 (16-55)||(5399607-5399646)
chr4 (16-55)||(18051837-18051876)
chr4 (16-55)||(18744170-18744209)
chr4 (16-51)||(19680524-19680559)
chr4 (16-55)||(19839177-19839216)
chr4 (16-55)||(25147719-25147758)
chr4 (16-55)||(27040125-27040164)
chr4 (16-55)||(46286329-46286368)
chr4 (16-45)||(4586858-4586887)
chr4 (16-45)||(13028916-13028945)
chr4 (19-55)||(30269091-30269127)
chr4 (19-55)||(30283062-30283098)
chr4 (19-55)||(30568102-30568138)
chr4 (16-52)||(38223511-38223547)
[»] chr3 (29 HSPs)
chr3 (16-55)||(11007783-11007822)
chr3 (16-55)||(11915754-11915793)
chr3 (16-55)||(19269964-19270003)
chr3 (16-55)||(27449084-27449123)
chr3 (16-55)||(5260933-5260972)
chr3 (20-55)||(8110335-8110370)
chr3 (16-55)||(19223445-19223484)
chr3 (16-55)||(19545506-19545545)
chr3 (16-54)||(1311059-1311097)
chr3 (18-55)||(28389969-28390006)
chr3 (16-55)||(1628211-1628250)
chr3 (16-55)||(4393450-4393489)
chr3 (16-55)||(8543465-8543504)
chr3 (16-55)||(9652574-9652613)
chr3 (20-55)||(10803716-10803751)
chr3 (16-55)||(15490031-15490070)
chr3 (16-55)||(17582401-17582440)
chr3 (16-55)||(18091647-18091686)
chr3 (16-55)||(18380020-18380059)
chr3 (16-55)||(18539800-18539839)
chr3 (16-55)||(26830542-26830581)
chr3 (16-55)||(29215988-29216027)
chr3 (16-55)||(29451090-29451129)
chr3 (16-55)||(49915447-49915486)
chr3 (16-54)||(19610335-19610373)
chr3 (16-45)||(13921331-13921360)
chr3 (16-45)||(29236050-29236079)
chr3 (16-45)||(35579625-35579654)
chr3 (16-45)||(48404866-48404895)
[»] chr2 (18 HSPs)
chr2 (16-55)||(27058416-27058455)
chr2 (16-55)||(32008948-32008987)
chr2 (19-55)||(37802481-37802517)
chr2 (16-55)||(1141532-1141571)
chr2 (16-55)||(8430292-8430331)
chr2 (20-55)||(9004412-9004447)
chr2 (16-55)||(13788155-13788194)
chr2 (16-55)||(15636835-15636874)
chr2 (16-55)||(18551353-18551392)
chr2 (16-55)||(23388478-23388517)
chr2 (16-55)||(28262360-28262399)
chr2 (16-55)||(30783334-30783373)
chr2 (16-55)||(32185828-32185867)
chr2 (16-55)||(32300447-32300486)
chr2 (16-55)||(37724092-37724131)
chr2 (16-55)||(41736168-41736207)
chr2 (16-49)||(13613193-13613226)
chr2 (19-55)||(21293814-21293850)
[»] scaffold0576 (1 HSPs)
scaffold0576 (18-55)||(9331-9368)
[»] scaffold0076 (1 HSPs)
scaffold0076 (16-55)||(26483-26522)
[»] scaffold0007 (2 HSPs)
scaffold0007 (16-51)||(3746-3781)
scaffold0007 (20-55)||(202774-202809)
[»] scaffold0184 (1 HSPs)
scaffold0184 (16-51)||(7460-7495)
[»] scaffold0062 (1 HSPs)
scaffold0062 (20-55)||(43917-43952)
[»] scaffold0058 (1 HSPs)
scaffold0058 (16-55)||(74641-74680)
[»] scaffold0047 (1 HSPs)
scaffold0047 (16-55)||(58582-58621)
[»] scaffold0240 (1 HSPs)
scaffold0240 (16-45)||(15090-15119)
[»] scaffold0014 (1 HSPs)
scaffold0014 (16-45)||(22221-22250)


Alignment Details
Target: chr1 (Bit Score: 132; Significance: 1e-68; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 69 - 222
Target Start/End: Complemental strand, 46790000 - 46789843
Alignment:
Q  69 agtagtgtaaaaaaccattatacaatatcatataagcttcataaaagaaactataggaaccaaaaaa-tataattgcattctagtataattttgttttaa 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  46790000 agtagtgtaaaaaaccattatacaatatcatataagcttcataaaagaaactataggaaccaaaaaaatataattgcattctagtataattttgttttaa 46789901  T
Q  168 aagttcgaaggagcctaatgcgagtctcttttctagttt---catccctcgtcgatat 222  Q
    |||||||||||||||||||||| ||||||||||||||||   ||||||||||||||||    
T  46789900 aagttcgaaggagcctaatgcgggtctcttttctagtttcatcatccctcgtcgatat 46789843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 29549457 - 29549418
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  29549457 agggattttacgttttccctcactaaatttccctcactaa 29549418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 41071935 - 41071974
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  41071935 agggattttacgttttccctcactaaatttccctcactaa 41071974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 22603584 - 22603548
Alignment:
Q  19 gattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||||||||||||||||||||||||||||||||    
T  22603584 gattttacgttttccctcactaaatttccctcactaa 22603548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 15243124 - 15243085
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  15243124 agggatttcacgttttccctcactaaatttccctcactaa 15243085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 13102357 - 13102316
Alignment:
Q  14 aaagggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||| ||||||| |||||||||||||||||||||||||||||    
T  13102357 aaagagattttatgttttccctcactaaatttccctcactaa 13102316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 32046912 - 32046876
Alignment:
Q  19 gattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||||||||||||||||| ||||||||||||||    
T  32046912 gattttacgttttccctcactatatttccctcactaa 32046876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 7830070 - 7830031
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  7830070 agggatttcatgttttccctcactaaatttccctcactaa 7830031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 9464142 - 9464103
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  9464142 agggatttcacgttttccctcacaaaatttccctcactaa 9464103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 9985427 - 9985466
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  9985427 agggattttacgtttttcctcacaaaatttccctcactaa 9985466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 12161853 - 12161814
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  12161853 agggatttcacgttttccctcacaaaatttccctcactaa 12161814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 14760906 - 14760867
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  14760906 agggatttcatgttttccctcactaaatttccctcactaa 14760867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 20408260 - 20408299
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  20408260 agggatttcacgttttccctcacaaaatttccctcactaa 20408299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 22158841 - 22158802
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  22158841 agggatttcacgttttccctcacaaaatttccctcactaa 22158802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 23457936 - 23457897
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  23457936 agggatttcacgttttccctcacaaaatttccctcactaa 23457897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 52183717 - 52183678
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  52183717 agggatttcacgttttccctcacaaaatttccctcactaa 52183678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 45
Target Start/End: Complemental strand, 4340446 - 4340417
Alignment:
Q  16 agggattttacgttttccctcactaaattt 45  Q
    ||||||||||||||||||||||||||||||    
T  4340446 agggattttacgttttccctcactaaattt 4340417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 12370043 - 12370080
Alignment:
Q  18 ggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  12370043 ggattttatgttttcccttactaaatttccctcactaa 12370080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 45
Target Start/End: Original strand, 41120837 - 41120866
Alignment:
Q  16 agggattttacgttttccctcactaaattt 45  Q
    ||||||||||||||||||||||||||||||    
T  41120837 agggattttacgttttccctcactaaattt 41120866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 45
Target Start/End: Original strand, 46786058 - 46786087
Alignment:
Q  16 agggattttacgttttccctcactaaattt 45  Q
    ||||||||||||||||||||||||||||||    
T  46786058 agggattttacgttttccctcactaaattt 46786087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 9259286 - 9259322
Alignment:
Q  19 gattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  9259286 gatttcacgttttccctcacaaaatttccctcactaa 9259322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 55
Target Start/End: Original strand, 17734065 - 17734093
Alignment:
Q  27 gttttccctcactaaatttccctcactaa 55  Q
    |||||||||||||||||||||||||||||    
T  17734065 gttttccctcactaaatttccctcactaa 17734093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 22789694 - 22789730
Alignment:
Q  19 gattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  22789694 gatttcacgttttccctctctaaatttccctcactaa 22789730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 38531273 - 38531309
Alignment:
Q  19 gattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  38531273 gatttcacgttttccctctctaaatttccctcactaa 38531309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 6079 - 6118
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  6079 agggattttacgttttccctcactaaatttccctcactaa 6118  T

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Target: scaffold0599 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 7544 - 7505
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  7544 agggattttacgttttccctcactaaatttccctcactaa 7505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 3823170 - 3823131
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  3823170 agggattttacgttttccctcactaaatttccctcactaa 3823131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 40289520 - 40289559
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  40289520 agggattttacgttttccctcactaaatttccctcactaa 40289559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 43431659 - 43431698
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  43431659 agggattttacgttttccctcactaaatttccctcactaa 43431698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 21350513 - 21350476
Alignment:
Q  18 ggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||||||||| |||||||||||||||||||||||    
T  21350513 ggattttacgtttttcctcactaaatttccctcactaa 21350476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 6817088 - 6817052
Alignment:
Q  19 gattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| ||||||||||||||||||||||||||||    
T  6817088 gattttacattttccctcactaaatttccctcactaa 6817052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 8555407 - 8555443
Alignment:
Q  19 gattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||| |||||||||||||||||||||||||||||    
T  8555407 gattttatgttttccctcactaaatttccctcactaa 8555443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 5879237 - 5879202
Alignment:
Q  20 attttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||||||| |||||||||||||||||||||||    
T  5879237 attttacgtttttcctcactaaatttccctcactaa 5879202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 9915140 - 9915179
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  9915140 agggatttcacgttttccctcacaaaatttccctcactaa 9915179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 17103965 - 17104004
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  17103965 agggatttcatgttttccctcactaaatttccctcactaa 17104004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 17824716 - 17824755
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  17824716 agggatttcatgttttccctcactaaatttccctcactaa 17824755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 19240900 - 19240865
Alignment:
Q  20 attttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||| ||||||||||||||||    
T  19240900 attttacgttttccctcacaaaatttccctcactaa 19240865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 19314084 - 19314049
Alignment:
Q  20 attttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||| ||||||||||||||||    
T  19314084 attttacgttttccctcacaaaatttccctcactaa 19314049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 32961692 - 32961657
Alignment:
Q  20 attttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||| ||||||||||||||||||||||||||||    
T  32961692 attttacattttccctcactaaatttccctcactaa 32961657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 45
Target Start/End: Original strand, 5670269 - 5670298
Alignment:
Q  16 agggattttacgttttccctcactaaattt 45  Q
    ||||||||||||||||||||||||||||||    
T  5670269 agggattttacgttttccctcactaaattt 5670298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 45
Target Start/End: Complemental strand, 11938782 - 11938753
Alignment:
Q  16 agggattttacgttttccctcactaaattt 45  Q
    ||||||||||||||||||||||||||||||    
T  11938782 agggattttacgttttccctcactaaattt 11938753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 45
Target Start/End: Complemental strand, 19256249 - 19256220
Alignment:
Q  16 agggattttacgttttccctcactaaattt 45  Q
    ||||||||||||||||||||||||||||||    
T  19256249 agggattttacgttttccctcactaaattt 19256220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 45
Target Start/End: Complemental strand, 24636689 - 24636660
Alignment:
Q  16 agggattttacgttttccctcactaaattt 45  Q
    ||||||||||||||||||||||||||||||    
T  24636689 agggattttacgttttccctcactaaattt 24636660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 29345108 - 29345072
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcac 52  Q
    |||||||| |||||||||||| |||||||||||||||    
T  29345108 agggatttcacgttttccctctctaaatttccctcac 29345072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 10050936 - 10050975
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10050936 agggattttacgttttccctcactaaatttccctcactaa 10050975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 31425611 - 31425650
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  31425611 agggattttacgttttccctcactaaatttccctcactaa 31425650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 1842933 - 1842898
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctca 51  Q
    ||||||||||||||||||||||||||||||||||||    
T  1842933 agggattttacgttttccctcactaaatttccctca 1842898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 9698642 - 9698677
Alignment:
Q  20 attttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||||||||||||||||||||    
T  9698642 attttacgttttccctcactaaatttccctcactaa 9698677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 18217868 - 18217829
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  18217868 agggattttacgtttttcctcactaaatttccctcactaa 18217829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 21917434 - 21917473
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  21917434 agggattttacgttttccctcactaaatgtccctcactaa 21917473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 23577289 - 23577328
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  23577289 agggatttcacgttttccctcactaaatttccctcactaa 23577328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 23750836 - 23750875
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  23750836 agggattttacattttccctcactaaatttccctcactaa 23750875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 45664807 - 45664768
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  45664807 agggattttacgttttccctcactatatttccctcactaa 45664768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 24140487 - 24140450
Alignment:
Q  18 ggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||||||||||||||||||    
T  24140487 ggattttatgttttccctcactaaatttccctcactaa 24140450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 11036546 - 11036507
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  11036546 agggatttcacgttttccctcacaaaatttccctcactaa 11036507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 20174059 - 20174020
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  20174059 agggatttcacgttttccctcacaaaatttccctcactaa 20174020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 20429504 - 20429465
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  20429504 agggatttcacgttttccctcacaaaatttccctcactaa 20429465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 22486433 - 22486394
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  22486433 agggatttcacgttttccgtcactaaatttccctcactaa 22486394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 22501633 - 22501594
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||| ||||||||||||||||||    
T  22501633 agggatttcacgttttccctctctaaatttccctcactaa 22501594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 37135385 - 37135424
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  37135385 agggatttcacgttttccctcacaaaatttccctcactaa 37135424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 39979724 - 39979763
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  39979724 agggatttcatgttttccctcactaaatttccctcactaa 39979763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 40847535 - 40847574
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  40847535 agggatttcatgttttccctcactaaatttccctcactaa 40847574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 687914 - 687877
Alignment:
Q  18 ggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||| ||||||||||||||||||| ||||||||    
T  687914 ggattttacattttccctcactaaatttctctcactaa 687877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 45
Target Start/End: Complemental strand, 21623060 - 21623031
Alignment:
Q  16 agggattttacgttttccctcactaaattt 45  Q
    ||||||||||||||||||||||||||||||    
T  21623060 agggattttacgttttccctcactaaattt 21623031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 23232080 - 23232039
Alignment:
Q  14 aaagggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||||| | ||||||||||||||||| |||||||||||    
T  23232080 aaagggatttcatgttttccctcactaaatatccctcactaa 23232039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 6849314 - 6849350
Alignment:
Q  19 gattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  6849314 gattttacgttttacctcactaaatttccctcgctaa 6849350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 21871608 - 21871572
Alignment:
Q  19 gattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||||||| |||||||||    
T  21871608 gattttacattttccctcactaaattttcctcactaa 21871572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 24605874 - 24605838
Alignment:
Q  19 gattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  24605874 gatttcacgttttccctcactaaattttcctcactaa 24605838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 32267386 - 32267350
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcac 52  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  32267386 agggattttgcgttttccctctctaaatttccctcac 32267350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 25398041 - 25398002
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25398041 agggattttacgttttccctcactaaatttccctcactaa 25398002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 28364950 - 28364911
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28364950 agggattttacgttttccctcactaaatttccctcactaa 28364911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 15364560 - 15364597
Alignment:
Q  18 ggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15364560 ggattttacgttttccctcactaaatttccctcactaa 15364597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 495730 - 495766
Alignment:
Q  19 gattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||||||||||||||||||||||||||||||||    
T  495730 gattttacgttttccctcactaaatttccctcactaa 495766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 343663 - 343702
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  343663 agggattttacgttttccctcattaaatttccctcactaa 343702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 9893002 - 9892963
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  9893002 agggatttcacgttttccctcactaaatttccctcactaa 9892963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 21990274 - 21990313
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  21990274 agggattttacgttttccctcactaaattttcctcactaa 21990313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 12951747 - 12951708
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  12951747 agggatttcatgttttccctcactaaatttccctcactaa 12951708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 14036659 - 14036620
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  14036659 agggatttcacgttttccctcacaaaatttccctcactaa 14036620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 21140978 - 21140939
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  21140978 agggatttcacgttttccctcacaaaatttccctcactaa 21140939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 22083877 - 22083838
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  22083877 agggatttcatgttttccctcactaaatttccctcactaa 22083838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 22579449 - 22579488
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  22579449 agggatttcacgttttccctcacaaaatttccctcactaa 22579488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 27705461 - 27705422
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  27705461 agggatttcacgttttccctcacaaaatttccctcactaa 27705422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 30834060 - 30834099
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||||||||| ||||||||||||||||| |||||||    
T  30834060 agggattttacgttctccctcactaaatttccttcactaa 30834099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 45
Target Start/End: Complemental strand, 15448424 - 15448395
Alignment:
Q  16 agggattttacgttttccctcactaaattt 45  Q
    ||||||||||||||||||||||||||||||    
T  15448424 agggattttacgttttccctcactaaattt 15448395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 23409019 - 23408980
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  23409019 agggattttacgttttccctcactaaatttccctcactaa 23408980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 12045764 - 12045727
Alignment:
Q  18 ggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12045764 ggattttacgttttccctcactaaatttccctcactaa 12045727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 7888836 - 7888797
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  7888836 agggattttacgttttccctcactaaattttcctcactaa 7888797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 8886951 - 8886990
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  8886951 agggattttacattttccctcactaaatttccctcactaa 8886990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 36831990 - 36832029
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  36831990 agggattttacattttccctcactaaatttccctcactaa 36832029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 25652683 - 25652719
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcac 52  Q
    ||||||||||| |||||||||||||||||||||||||    
T  25652683 agggattttacattttccctcactaaatttccctcac 25652719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 13974178 - 13974217
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  13974178 agggatttcacgttttccctcacaaaatttccctcactaa 13974217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 17039731 - 17039770
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||||| ||||||||||||||    
T  17039731 agggatttcacgttttccctcactatatttccctcactaa 17039770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 23975674 - 23975635
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  23975674 agggatttcacgttttccctcacaaaatttccctcactaa 23975635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 33818661 - 33818700
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  33818661 agggatttcatgttttccctcactaaatttccctcactaa 33818700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 18413597 - 18413556
Alignment:
Q  14 aaagggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||| || |||||||||||| ||||||||||||||||||    
T  18413597 aaagggaattcacgttttccctctctaaatttccctcactaa 18413556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 33816856 - 33816897
Alignment:
Q  14 aaagggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||| |||| | |||||||||||||||||||||||||||||    
T  33816856 aaaggaatttcatgttttccctcactaaatttccctcactaa 33816897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 7003831 - 7003867
Alignment:
Q  19 gattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  7003831 gatttcacgttttccctcacaaaatttccctcactaa 7003867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 20959544 - 20959508
Alignment:
Q  19 gattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  20959544 gatttcacgttttccctctctaaatttccctcactaa 20959508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 32175837 - 32175876
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  32175837 agggattttacgttttccctcactaaatttccctcactaa 32175876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 45532679 - 45532718
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  45532679 agggattttacgttttccctcactaaatttccctcactaa 45532718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 55309313 - 55309352
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  55309313 agggattttacgttttccctcactaaatttccctcactaa 55309352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 5473886 - 5473847
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  5473886 agggattttacgttttccctcactaaattttcctcactaa 5473847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 13565019 - 13565054
Alignment:
Q  20 attttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||||||||||||||||||||    
T  13565019 attttacgttttccctcactaaatttccctcactaa 13565054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 22128412 - 22128451
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  22128412 agggatttcacgttttccctcactaaatttccctcactaa 22128451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 5399646 - 5399607
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  5399646 agggatttcatgttttccctcactaaatttccctcactaa 5399607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 18051876 - 18051837
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  18051876 agggatttcacgttttccctcacaaaatttccctcactaa 18051837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 18744170 - 18744209
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  18744170 agggatttcacgttttccctcacaaaatttccctcactaa 18744209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 19680524 - 19680559
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctca 51  Q
    ||||||||||||||||||||||| ||||||||||||    
T  19680524 agggattttacgttttccctcacaaaatttccctca 19680559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 19839216 - 19839177
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||||||||||||||||||||||||| |||| ||||    
T  19839216 agggattttacgttttccctcactaaattttcctcgctaa 19839177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 25147758 - 25147719
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  25147758 agggatttcatgttttccctcactaaatttccctcactaa 25147719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 27040125 - 27040164
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  27040125 agggatttcacgttttccctcacaaaatttccctcactaa 27040164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 46286329 - 46286368
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  46286329 agggatttcacgttttccctcacaaaatttccctcactaa 46286368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 45
Target Start/End: Original strand, 4586858 - 4586887
Alignment:
Q  16 agggattttacgttttccctcactaaattt 45  Q
    ||||||||||||||||||||||||||||||    
T  4586858 agggattttacgttttccctcactaaattt 4586887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 45
Target Start/End: Original strand, 13028916 - 13028945
Alignment:
Q  16 agggattttacgttttccctcactaaattt 45  Q
    ||||||||||||||||||||||||||||||    
T  13028916 agggattttacgttttccctcactaaattt 13028945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 30269091 - 30269127
Alignment:
Q  19 gattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  30269091 gattttacattttccctcgctaaatttccctcactaa 30269127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 30283098 - 30283062
Alignment:
Q  19 gattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  30283098 gattttacattttccctcgctaaatttccctcactaa 30283062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 30568102 - 30568138
Alignment:
Q  19 gattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||||||||||||||| |||||||| |||||||    
T  30568102 gattttacgttttccctcacaaaatttccttcactaa 30568138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 38223547 - 38223511
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcac 52  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  38223547 agggattttgcgttttccctctctaaatttccctcac 38223511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 11007783 - 11007822
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11007783 agggattttacgttttccctcactaaatttccctcactaa 11007822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 11915793 - 11915754
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11915793 agggattttacgttttccctcactaaatttccctcactaa 11915754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 19269964 - 19270003
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19269964 agggattttacgttttccctcactaaatttccctcactaa 19270003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 27449123 - 27449084
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  27449123 agggattttacgttttccctcactaaatttccctcactaa 27449084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 5260972 - 5260933
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  5260972 agggattttacgttttccctcactatatttccctcactaa 5260933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 8110370 - 8110335
Alignment:
Q  20 attttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||||||||||||||||||||    
T  8110370 attttacgttttccctcactaaatttccctcactaa 8110335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 19223484 - 19223445
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  19223484 agggattttacgttttcccccactaaatttccctcactaa 19223445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 19545545 - 19545506
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  19545545 agggattttacgtttttcctcactaaatttccctcactaa 19545506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 1311059 - 1311097
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcacta 54  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  1311059 agggattttacgttttccatcactaaatttccctcacta 1311097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 28390006 - 28389969
Alignment:
Q  18 ggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||| |||||||||||||||||||||||||||||||    
T  28390006 ggatttcacgttttccctcactaaatttccctcactaa 28389969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 1628250 - 1628211
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||| ||||||||||||||||||    
T  1628250 agggatttcacgttttccctctctaaatttccctcactaa 1628211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 4393450 - 4393489
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  4393450 agggatttcacgttttccctcacaaaatttccctcactaa 4393489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 8543504 - 8543465
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  8543504 agggatttcacgttttccctcacaaaatttccctcactaa 8543465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 9652613 - 9652574
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  9652613 agggatttcacgttttccctcacaaaatttccctcactaa 9652574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 10803751 - 10803716
Alignment:
Q  20 attttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||||||||||||||| ||||    
T  10803751 attttacgttttccctcactaaatttccctcgctaa 10803716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 15490070 - 15490031
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||| ||||||||||||||||||||||    
T  15490070 agggatttcacgttttctctcactaaatttccctcactaa 15490031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 17582401 - 17582440
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  17582401 agggatttcacgttttccctcacaaaatttccctcactaa 17582440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 18091647 - 18091686
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||||| ||||||||||||||||| |||||||||||    
T  18091647 agggattttatgttttccctcactaaatatccctcactaa 18091686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 18380059 - 18380020
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||| |||||||||| |||||||||||||||||    
T  18380059 agggattttacattttccctcattaaatttccctcactaa 18380020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 18539839 - 18539800
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  18539839 agggatttcacgttttccctcacaaaatttccctcactaa 18539800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 26830542 - 26830581
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||| ||||||||||||||||||    
T  26830542 agggatttcacgttttccctctctaaatttccctcactaa 26830581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 29216027 - 29215988
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  29216027 agggatttcatgttttccctcactaaatttccctcactaa 29215988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 29451129 - 29451090
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||||||||||||||| ||| ||||    
T  29451129 agggattttacgttttccctcactaaatttctctcgctaa 29451090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 49915486 - 49915447
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  49915486 agggatttcatgttttccctcactaaatttccctcactaa 49915447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 19610373 - 19610335
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcacta 54  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  19610373 agggatttcatgttttccctcactaaatttccctcacta 19610335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 45
Target Start/End: Complemental strand, 13921360 - 13921331
Alignment:
Q  16 agggattttacgttttccctcactaaattt 45  Q
    ||||||||||||||||||||||||||||||    
T  13921360 agggattttacgttttccctcactaaattt 13921331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 45
Target Start/End: Complemental strand, 29236079 - 29236050
Alignment:
Q  16 agggattttacgttttccctcactaaattt 45  Q
    ||||||||||||||||||||||||||||||    
T  29236079 agggattttacgttttccctcactaaattt 29236050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 45
Target Start/End: Original strand, 35579625 - 35579654
Alignment:
Q  16 agggattttacgttttccctcactaaattt 45  Q
    ||||||||||||||||||||||||||||||    
T  35579625 agggattttacgttttccctcactaaattt 35579654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 45
Target Start/End: Complemental strand, 48404895 - 48404866
Alignment:
Q  16 agggattttacgttttccctcactaaattt 45  Q
    ||||||||||||||||||||||||||||||    
T  48404895 agggattttacgttttccctcactaaattt 48404866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 27058416 - 27058455
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  27058416 agggattttacgttttccctcactaaatttccctcactaa 27058455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 32008987 - 32008948
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  32008987 agggattttacgttttccctcattaaatttccctcactaa 32008948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 37802481 - 37802517
Alignment:
Q  19 gattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||||||||||||| ||||||||||||||||||    
T  37802481 gattttacgttttccctctctaaatttccctcactaa 37802517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 1141571 - 1141532
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  1141571 agggatttcacgttttccctcacaaaatttccctcactaa 1141532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 8430331 - 8430292
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  8430331 agggatttcacgttttccctcacaaaatttccctcactaa 8430292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 9004412 - 9004447
Alignment:
Q  20 attttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||| ||||||||||||||||||||||||||||    
T  9004412 attttacattttccctcactaaatttccctcactaa 9004447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 13788155 - 13788194
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  13788155 agggattttacattttccctcactaaattttcctcactaa 13788194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 15636835 - 15636874
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  15636835 agggatttcacgttttccctcacaaaatttccctcactaa 15636874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 18551353 - 18551392
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||||| ||||||||||||||||| |||||||||||    
T  18551353 agggattttatgttttccctcactaaatatccctcactaa 18551392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 23388478 - 23388517
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  23388478 agggatttcacgttttccctcacaaaatttccctcactaa 23388517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 28262399 - 28262360
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  28262399 agggatttcacgttttccctcacaaaatttccctcactaa 28262360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 30783373 - 30783334
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  30783373 agggatttcatgttttccctcactaaatttccctcactaa 30783334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 32185867 - 32185828
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  32185867 agggatttcacgttttccctcacaaaatttccctcactaa 32185828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 32300486 - 32300447
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  32300486 agggatttcacgttttccctcacaaaatttccctcactaa 32300447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 37724092 - 37724131
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| |||||||||||||||||||||| ||||||||    
T  37724092 agggatttcacgttttccctcactaaatttctctcactaa 37724131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 41736207 - 41736168
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  41736207 agggattttacattttccctcactaaattttcctcactaa 41736168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 13613193 - 13613226
Alignment:
Q  16 agggattttacgttttccctcactaaatttccct 49  Q
    ||||||||||||||||||||||||||| ||||||    
T  13613193 agggattttacgttttccctcactaaacttccct 13613226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 21293814 - 21293850
Alignment:
Q  19 gattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  21293814 gatttcacgttttccctcacaaaatttccctcactaa 21293850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 9331 - 9368
Alignment:
Q  18 ggattttacgttttccctcactaaatttccctcactaa 55  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9331 ggattttacgttttccctcactaaatttccctcactaa 9368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 26522 - 26483
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  26522 agggattttacgttttccctcactaaatgtccctcactaa 26483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 3781 - 3746
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctca 51  Q
    ||||||||||||||||||||||||||||||||||||    
T  3781 agggattttacgttttccctcactaaatttccctca 3746  T

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Target: scaffold0007; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 202809 - 202774
Alignment:
Q  20 attttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||||||||||||||||||||| |||||||||    
T  202809 attttacgttttccctcactaaattttcctcactaa 202774  T

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Target: scaffold0184 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 7495 - 7460
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctca 51  Q
    |||||||| |||||||||||||||||||||||||||    
T  7495 agggatttcacgttttccctcactaaatttccctca 7460  T

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Target: scaffold0062 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 43952 - 43917
Alignment:
Q  20 attttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||||||||||||||||||||| |||||||||    
T  43952 attttacgttttccctcactaaattttcctcactaa 43917  T

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Target: scaffold0058 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 74641 - 74680
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  74641 agggatttcatgttttccctcactaaatttccctcactaa 74680  T

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Target: scaffold0047 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 58621 - 58582
Alignment:
Q  16 agggattttacgttttccctcactaaatttccctcactaa 55  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  58621 agggatttcatgttttccctcactaaatttccctcactaa 58582  T

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Target: scaffold0240 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 45
Target Start/End: Original strand, 15090 - 15119
Alignment:
Q  16 agggattttacgttttccctcactaaattt 45  Q
    ||||||||||||||||||||||||||||||    
T  15090 agggattttacgttttccctcactaaattt 15119  T

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Target: scaffold0014 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 45
Target Start/End: Complemental strand, 22250 - 22221
Alignment:
Q  16 agggattttacgttttccctcactaaattt 45  Q
    ||||||||||||||||||||||||||||||    
T  22250 agggattttacgttttccctcactaaattt 22221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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