View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11861_low_3 (Length: 716)

Name: NF11861_low_3
Description: NF11861
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11861_low_3
NF11861_low_3
[»] chr4 (36 HSPs)
chr4 (203-701)||(51066938-51067421)
chr4 (84-164)||(24157934-24158014)
chr4 (71-176)||(4379977-4380082)
chr4 (138-201)||(24158813-24158876)
chr4 (103-195)||(53772810-53772902)
chr4 (92-167)||(31328833-31328908)
chr4 (144-202)||(142523-142581)
chr4 (142-196)||(8247698-8247752)
chr4 (152-202)||(40495091-40495141)
chr4 (142-200)||(56262476-56262534)
chr4 (141-202)||(55976162-55976223)
chr4 (142-202)||(8248517-8248577)
chr4 (142-194)||(8265365-8265417)
chr4 (142-202)||(8266182-8266242)
chr4 (66-166)||(17447714-17447814)
chr4 (142-202)||(53732431-53732491)
chr4 (144-195)||(26147031-26147082)
chr4 (149-195)||(599305-599351)
chr4 (103-169)||(4380648-4380714)
chr4 (66-168)||(43145985-43146087)
chr4 (141-195)||(47688475-47688529)
chr4 (85-202)||(5590971-5591088)
chr4 (141-202)||(20774176-20774237)
chr4 (85-202)||(48127282-48127399)
chr4 (144-196)||(24374791-24374843)
chr4 (138-202)||(31329710-31329774)
chr4 (141-193)||(55001436-55001488)
chr4 (151-202)||(19080381-19080432)
chr4 (142-201)||(53148608-53148667)
chr4 (149-195)||(2446165-2446211)
chr4 (149-195)||(5046486-5046532)
chr4 (142-196)||(30573706-30573760)
chr4 (141-195)||(47687912-47687966)
chr4 (141-202)||(12920270-12920331)
chr4 (141-202)||(24551919-24551980)
chr4 (144-201)||(40347551-40347608)
[»] chr2 (29 HSPs)
chr2 (7-199)||(9540895-9541087)
chr2 (73-202)||(9540327-9540456)
chr2 (92-196)||(8541753-8541857)
chr2 (144-200)||(24933834-24933890)
chr2 (144-195)||(22301868-22301919)
chr2 (144-202)||(9276328-9276386)
chr2 (144-202)||(29719442-29719500)
chr2 (128-202)||(33512093-33512167)
chr2 (84-166)||(34812043-34812124)
chr2 (144-196)||(1296381-1296433)
chr2 (144-195)||(15774205-15774256)
chr2 (151-202)||(27177908-27177959)
chr2 (141-195)||(18174665-18174719)
chr2 (144-194)||(26752721-26752771)
chr2 (144-202)||(38361063-38361121)
chr2 (149-202)||(29512367-29512420)
chr2 (138-202)||(26589009-26589073)
chr2 (144-195)||(1297121-1297172)
chr2 (142-177)||(5761356-5761391)
chr2 (144-195)||(9275589-9275640)
chr2 (141-195)||(11750260-11750314)
chr2 (141-195)||(15902877-15902931)
chr2 (141-195)||(18174102-18174156)
chr2 (90-196)||(20632854-20632960)
chr2 (142-196)||(22560564-22560618)
chr2 (149-195)||(29559423-29559469)
chr2 (150-195)||(11751073-11751118)
chr2 (142-179)||(22559877-22559914)
chr2 (150-195)||(23857028-23857073)
[»] chr3 (33 HSPs)
chr3 (14-179)||(2092780-2092943)
chr3 (84-202)||(48648199-48648317)
chr3 (84-193)||(51827433-51827542)
chr3 (85-196)||(30222038-30222149)
chr3 (138-196)||(48649166-48649224)
chr3 (142-195)||(13349418-13349471)
chr3 (141-202)||(21727525-21727586)
chr3 (85-164)||(11651333-11651412)
chr3 (92-163)||(41458781-41458852)
chr3 (142-200)||(48507029-48507087)
chr3 (144-196)||(37520560-37520612)
chr3 (142-202)||(48506434-48506493)
chr3 (84-177)||(6974685-6974775)
chr3 (149-196)||(14871155-14871202)
chr3 (142-192)||(981673-981723)
chr3 (144-202)||(13477053-13477111)
chr3 (141-195)||(17603171-17603225)
chr3 (142-196)||(20213528-20213582)
chr3 (138-196)||(48765063-48765121)
chr3 (141-202)||(20212976-20213037)
chr3 (149-202)||(37988222-37988275)
chr3 (144-201)||(45081402-45081459)
chr3 (150-202)||(10847287-10847339)
chr3 (150-202)||(11203206-11203258)
chr3 (140-196)||(41458035-41458091)
chr3 (142-202)||(48764473-48764533)
chr3 (141-187)||(13477774-13477820)
chr3 (144-202)||(27082772-27082830)
chr3 (142-196)||(52266450-52266504)
chr3 (141-202)||(17603957-17604018)
chr3 (149-194)||(31115603-31115648)
chr3 (112-193)||(37987238-37987319)
chr3 (150-195)||(54458670-54458715)
[»] chr6 (19 HSPs)
chr6 (7-162)||(10926177-10926332)
chr6 (84-195)||(33435342-33435453)
chr6 (78-162)||(10927153-10927237)
chr6 (139-202)||(2512433-2512496)
chr6 (144-202)||(19323765-19323823)
chr6 (73-200)||(13255009-13255143)
chr6 (142-202)||(10171271-10171331)
chr6 (141-195)||(21133222-21133276)
chr6 (142-196)||(26529509-26529563)
chr6 (138-196)||(33436266-33436324)
chr6 (142-195)||(10171962-10172015)
chr6 (142-195)||(26528825-26528878)
chr6 (111-177)||(20833316-20833383)
chr6 (141-195)||(3623177-3623231)
chr6 (141-195)||(8488471-8488525)
chr6 (150-196)||(8489284-8489330)
chr6 (142-196)||(19311823-19311877)
chr6 (138-196)||(20833959-20834017)
chr6 (141-202)||(19653965-19654026)
[»] chr1 (28 HSPs)
chr1 (85-196)||(25671964-25672075)
chr1 (85-196)||(50271723-50271834)
chr1 (138-201)||(34309223-34309286)
chr1 (138-196)||(25469079-25469137)
chr1 (142-195)||(28181535-28181588)
chr1 (141-202)||(30663972-30664033)
chr1 (138-202)||(27256705-27256769)
chr1 (138-200)||(34308470-34308532)
chr1 (119-196)||(37852524-37852601)
chr1 (144-195)||(13262835-13262886)
chr1 (71-178)||(40022169-40022276)
chr1 (149-195)||(4439210-4439256)
chr1 (144-202)||(7406240-7406298)
chr1 (149-202)||(7559203-7559256)
chr1 (151-200)||(17171928-17171977)
chr1 (142-195)||(32038479-32038532)
chr1 (141-205)||(30663350-30663414)
chr1 (144-195)||(4135543-4135594)
chr1 (149-196)||(11548801-11548848)
chr1 (151-202)||(46391872-46391923)
chr1 (149-195)||(4433851-4433897)
chr1 (142-196)||(13263513-13263567)
chr1 (138-196)||(25671171-25671229)
chr1 (149-195)||(49680813-49680859)
chr1 (150-195)||(12760778-12760823)
chr1 (141-202)||(24991965-24992026)
chr1 (142-195)||(28182069-28182122)
chr1 (150-195)||(36390372-36390417)
[»] chr5 (30 HSPs)
chr5 (85-192)||(22799699-22799806)
chr5 (138-202)||(19360468-19360532)
chr5 (141-202)||(19128765-19128826)
chr5 (85-166)||(41045415-41045496)
chr5 (138-202)||(237813-237877)
chr5 (144-200)||(1554081-1554137)
chr5 (144-196)||(4084881-4084933)
chr5 (138-202)||(19359699-19359763)
chr5 (85-177)||(31082683-31082775)
chr5 (127-202)||(7632090-7632165)
chr5 (138-196)||(234702-234760)
chr5 (85-195)||(19366505-19366615)
chr5 (66-195)||(29088538-29088667)
chr5 (144-200)||(6476789-6476845)
chr5 (141-195)||(17071226-17071280)
chr5 (144-202)||(27364485-27364543)
chr5 (141-195)||(34600263-34600317)
chr5 (141-202)||(1281831-1281892)
chr5 (150-207)||(13306273-13306330)
chr5 (154-202)||(10554517-10554565)
chr5 (142-202)||(28705875-28705935)
chr5 (131-194)||(1283485-1283548)
chr5 (149-196)||(29046030-29046077)
chr5 (84-155)||(31036082-31036153)
chr5 (138-193)||(33005525-33005580)
chr5 (141-195)||(2313949-2314003)
chr5 (141-195)||(17071789-17071843)
chr5 (90-202)||(235421-235534)
chr5 (142-195)||(235594-235647)
chr5 (90-202)||(237038-237151)
[»] chr7 (36 HSPs)
chr7 (85-179)||(31954233-31954327)
chr7 (138-202)||(30661448-30661512)
chr7 (144-203)||(1417602-1417661)
chr7 (138-200)||(37949602-37949664)
chr7 (141-202)||(13785589-13785650)
chr7 (138-207)||(25599012-25599081)
chr7 (138-202)||(19068388-19068452)
chr7 (144-200)||(38225974-38226030)
chr7 (150-200)||(3689276-3689326)
chr7 (142-202)||(45099890-45099950)
chr7 (138-197)||(19067637-19067696)
chr7 (141-196)||(21496979-21497034)
chr7 (144-195)||(27948448-27948499)
chr7 (111-202)||(36378807-36378898)
chr7 (142-196)||(26636104-26636158)
chr7 (141-195)||(40273562-40273616)
chr7 (144-202)||(46428182-46428240)
chr7 (150-195)||(3029203-3029248)
chr7 (142-195)||(3772523-3772576)
chr7 (141-202)||(47719700-47719761)
chr7 (144-196)||(7668483-7668535)
chr7 (138-202)||(23889799-23889863)
chr7 (146-202)||(23901095-23901151)
chr7 (144-196)||(25343238-25343290)
chr7 (147-202)||(3688379-3688434)
chr7 (144-195)||(25342499-25342550)
chr7 (144-195)||(25343305-25343356)
chr7 (112-179)||(31954302-31954369)
chr7 (85-196)||(31955157-31955267)
chr7 (149-196)||(46428821-46428868)
chr7 (142-196)||(26636857-26636911)
chr7 (149-195)||(30660595-30660641)
chr7 (149-195)||(37950471-37950517)
chr7 (127-193)||(43065098-43065164)
chr7 (141-202)||(14305085-14305146)
chr7 (149-202)||(25599823-25599876)
[»] scaffold0085 (3 HSPs)
scaffold0085 (138-200)||(22063-22125)
scaffold0085 (142-201)||(15019-15078)
scaffold0085 (142-196)||(15083-15137)
[»] chr8 (26 HSPs)
chr8 (150-202)||(17724761-17724813)
chr8 (144-195)||(3043245-3043296)
chr8 (138-196)||(8372915-8372973)
chr8 (144-202)||(27441462-27441520)
chr8 (142-195)||(11686960-11687013)
chr8 (92-164)||(531422-531494)
chr8 (141-202)||(39860106-39860169)
chr8 (141-196)||(37732828-37732883)
chr8 (141-195)||(3043960-3044014)
chr8 (144-202)||(3417353-3417411)
chr8 (138-196)||(8373685-8373743)
chr8 (142-196)||(9197816-9197870)
chr8 (150-200)||(17725658-17725708)
chr8 (138-196)||(31641513-31641571)
chr8 (141-202)||(9197091-9197152)
chr8 (150-203)||(26652288-26652341)
chr8 (142-195)||(31602019-31602072)
chr8 (141-202)||(32414519-32414580)
chr8 (149-202)||(41974636-41974689)
chr8 (142-202)||(31642083-31642143)
chr8 (145-196)||(15198289-15198340)
chr8 (142-193)||(26654374-26654425)
chr8 (144-195)||(38576300-38576351)
chr8 (144-202)||(8996972-8997030)
chr8 (146-196)||(22320376-22320426)
chr8 (149-202)||(3165125-3165178)
[»] scaffold0418 (1 HSPs)
scaffold0418 (152-202)||(6891-6941)
[»] scaffold0096 (1 HSPs)
scaffold0096 (90-202)||(39891-40004)
[»] scaffold0002 (1 HSPs)
scaffold0002 (143-196)||(428899-428952)
[»] scaffold0176 (1 HSPs)
scaffold0176 (150-202)||(26587-26639)
[»] scaffold1207 (1 HSPs)
scaffold1207 (150-197)||(1587-1634)


Alignment Details
Target: chr4 (Bit Score: 407; Significance: 0; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 407; E-Value: 0
Query Start/End: Original strand, 203 - 701
Target Start/End: Original strand, 51066938 - 51067421
Alignment:
Q  203 tttttgaatatacaattttcattaacgtatctctttggatatacattttcattaacaaacaattttcattttgtatctttggttctcaaatatgcttata 302  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51066938 tttttgaatatacagttttcattaacgtatctctttggatatacattttcattaacaaacaattttcattttgtatctttggttctcaaatatgcttata 51067037  T
Q  303 cgattagtgcaccttcggatcatccaaccgtagacatttactcacatttaacttggaacgaagtagtgcccctgaaaatgaatgtatttgtgtggagact 402  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  51067038 cgattactgcaccttcagatcatccaaccgtagacatttactcacatttaacttggaacgaagtagtgcacctgaaaatgaatgtatttgtgtggagact 51067137  T
Q  403 attaaataaaagaatcctcactaaggataatctcagtaatcgtcgtggaatggtgccgtctagttcattgctttgctcgagaggatgtaggaaggatgaa 502  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  51067138 attaaataaaagaatcctcactaagaataatctcagtaatcgtcgtggaatgatgccgtctagttcattgctttgctcgagaggatgtaggaaggatgaa 51067237  T
Q  503 actattaattatttgtttcttggatgtgattattttggaagtgtttggaatcttgttcttcgatgaatgggtgggtatctcttttgaaaatccagcagac 602  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                |||    
T  51067238 actattaattatttgtttcttggatgtgattattttggaagtgtttggaatcttgttcttcgatgaatgggtgggtatctc----------------gac 51067321  T
Q  603 gttgaagagcatgttctgcaatttggtggtgcccttctctttagaaagaaagcttgtccttatttatagg-ttatatggatgtcttgtgtcttgattatt 701  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||    
T  51067322 gttgaagagcatgttctgcaatttggtggtgcccttctctttagaaagaaagcttgtcattgtttataggtttatatggatgtcttgtgtcttgattatt 51067421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 84 - 164
Target Start/End: Complemental strand, 24158014 - 24157934
Alignment:
Q  84 agtggttcacatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacg 164  Q
    |||||||||||||||||||||||||| |||||||||||| |  ||| |||| | |||||||||||||||||||||||||||    
T  24158014 agtggttcacatgatattctaaatgaacaaatataagcctttagataaaaagaaatcaacggttaagatttggtgtcaacg 24157934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 4380082 - 4379977
Alignment:
Q  71 acaatcgtgtgtgagtggttcacatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaatttg 170  Q
    ||||||||||| | |||||||||||| |||| ||||| | |||||| ||||| |  |||||||| | |||||||||||| |||||||||||| ||||| |    
T  4380082 acaatcgtgtgagggtggttcacatggtattttaaataaacaaatacaagcccttagatcaaaagagatcaacggttaacatttggtgtcaatgaattcg 4379983  T
Q  171 ttgaca 176  Q
    ||||||    
T  4379982 ttgaca 4379977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 201
Target Start/End: Original strand, 24158813 - 24158876
Alignment:
Q  138 atcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctca 201  Q
    |||||||||||||||||||||||||||||| |||||||||| ||| |||| |||||||| ||||    
T  24158813 atcaacggttaagatttggtgtcaacgaatctgttgacacctggtgtcaatggatcctgactca 24158876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 103 - 195
Target Start/End: Complemental strand, 53772902 - 53772810
Alignment:
Q  103 taaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    ||||||| |||| | ||||| | ||||||||| | ||||||| |||| |||||||||||||||||  ||||||||| ||| ||||||||||||    
T  53772902 taaatgaacaaacaaaagcctttggatcaaaagaaatcaacgattaatatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 53772810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 31328908 - 31328833
Alignment:
Q  92 acatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaat 167  Q
    |||||||||| ||||||| |||||||||||| || ||| |||| | ||||||| |||| |||||||||||||||||    
T  31328908 acatgatattttaaatgaacaaatataagccttcagattaaaagaaatcaacgtttaaaatttggtgtcaacgaat 31328833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 142523 - 142581
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    ||||||||||||||||||| ||||| ||||||||| ||| |||||||||||| ||||||    
T  142523 ggttaagatttggtgtcaatgaattcgttgacacccggtgtcaacggatcctatctcat 142581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 8247752 - 8247698
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    ||||||||||||| ||||||||||||  ||||||||||||| |||||||||||||    
T  8247752 acggttaagattttgtgtcaacgaatccgttgacaccaggtgtcaacggatcctg 8247698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 40495141 - 40495091
Alignment:
Q  152 tttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||| |||||    
T  40495141 tttggtgtcaacgaatttgttgacacctggtgtcaacggatcctgactcat 40495091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 200
Target Start/End: Complemental strand, 56262534 - 56262476
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctc 200  Q
    |||||| ||||||||||||||||||||  |||||||| ||| |||||||||||||||||    
T  56262534 acggttgagatttggtgtcaacgaattcattgacacctggtgtcaacggatcctgtctc 56262476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 55976223 - 55976162
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||| ||||||||||||||||||||||  ||||||||| ||| ||||||||| |||||||||    
T  55976223 aacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaacggattctgtctcat 55976162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 8248517 - 8248577
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    ||||||||||||||||||||||||||  ||||||| | ||| ||||||||||||| |||||    
T  8248517 acggttaagatttggtgtcaacgaatccgttgacatctggtgtcaacggatcctgactcat 8248577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 8265417 - 8265365
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcc 194  Q
    ||||||||||||| ||||||||||||  ||||||||||||| |||||||||||    
T  8265417 acggttaagattttgtgtcaacgaatccgttgacaccaggtgtcaacggatcc 8265365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 8266182 - 8266242
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    ||||||||||||||||||||||||||  ||||||| | ||| ||||||||||||| |||||    
T  8266182 acggttaagatttggtgtcaacgaatccgttgacatctggtgtcaacggatcctgactcat 8266242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 166
Target Start/End: Complemental strand, 17447814 - 17447714
Alignment:
Q  66 gaaggacaatcgtgtgtgagtggttcacatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacga 165  Q
    |||||| |||| |||| |||| |||||| || |||| ||||||| ||||||||| || |  ||| |||| | |||||||||||| |||||||||||||||    
T  17447814 gaaggataatcctgtgagagtagttcacgtggtattttaaatgaacaaatataaacccttagattaaaagagatcaacggttaatatttggtgtcaacga 17447715  T
Q  166 a 166  Q
    |    
T  17447714 a 17447714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 53732491 - 53732431
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||||| |||||| ||||||||||||  ||||||||| ||| |||||||||||||||||||    
T  53732491 acggttgagatttagtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctcat 53732431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 26147031 - 26147082
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||| |||||||||||||||||||| ||||||||| ||| ||||||||||||    
T  26147031 ggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 26147082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 195
Target Start/End: Original strand, 599305 - 599351
Alignment:
Q  149 agatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||||||||||||||||||  ||||||||||||| ||||||||||||    
T  599305 agatttggtgtcaacgaatccgttgacaccaggtgtcaacggatcct 599351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 169
Target Start/End: Original strand, 4380648 - 4380714
Alignment:
Q  103 taaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaattt 169  Q
    ||||||| |||||| ||||| |  |||||||| | |||||||||||| |||||||||||||||||||    
T  4380648 taaatgaacaaatacaagcccttagatcaaaagagatcaacggttaatatttggtgtcaacgaattt 4380714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 168
Target Start/End: Complemental strand, 43146087 - 43145985
Alignment:
Q  66 gaaggacaatcgtgtgtgagtggttcacatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacga 165  Q
    |||||| |||| |||| |||| |||||| |  |||| ||||||| |||| ||||||  |  |||||||| | |||||||||||| |||||||||||||||    
T  43146087 gaaggataatcctgtgagagtagttcacgtagtattttaaatgaacaaacataagctcttagatcaaaagagatcaacggttaacatttggtgtcaacga 43145988  T
Q  166 att 168  Q
    |||    
T  43145987 att 43145985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 47688475 - 47688529
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    ||||||| |||||||||||||||||||  ||||||||| ||| ||||||||||||    
T  47688475 aacggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 47688529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 202
Target Start/End: Original strand, 5590971 - 5591088
Alignment:
Q  85 gtggttcacatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaatttgttgacaccaggtct 184  Q
    ||||||||||| ||||||| |||||  ||||||||||  |  |||||||| | |||||| ||||| ||||| | ||||| ||||  |||||||| ||| |    
T  5590971 gtggttcacattatattcttaatgaataaatataagcatttagatcaaaagaaatcaacagttaaaatttgatatcaacaaattcattgacacctggtgt 5591070  T
Q  185 caacggatcctgtctcat 202  Q
    ||||||||| || |||||    
T  5591071 caacggatcttgactcat 5591088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 20774176 - 20774237
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    ||||||| |||||||||||||||||||  ||||||||| ||| |||| |||||||| |||||    
T  20774176 aacggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctgactcat 20774237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 202
Target Start/End: Complemental strand, 48127399 - 48127282
Alignment:
Q  85 gtggttcacatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaatttgttgacaccaggtct 184  Q
    ||||||||||| ||||||| |||||  ||||||||||  |  |||||||| | |||||| ||||| ||||| | ||||| ||||  |||||||| ||| |    
T  48127399 gtggttcacattatattcttaatgaataaatataagcatttagatcaaaagaaatcaacagttaaaatttgatatcaacaaattcattgacacctggtgt 48127300  T
Q  185 caacggatcctgtctcat 202  Q
    ||||||||| || |||||    
T  48127299 caacggatcttgactcat 48127282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 24374843 - 24374791
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    |||| |||||||||||||||||||| ||||||| | ||| |||||||||||||    
T  24374843 ggttgagatttggtgtcaacgaattcgttgacagctggtgtcaacggatcctg 24374791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 31329710 - 31329774
Alignment:
Q  138 atcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    ||||| ||||| |||||||||| |||||||  ||||||||| ||| ||||||||||||| |||||    
T  31329710 atcaatggttaggatttggtgttaacgaatccgttgacacctggtgtcaacggatcctgactcat 31329774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 55001436 - 55001488
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatc 193  Q
    |||||||||||||| ||||||||||||  ||||||||| ||| ||||||||||    
T  55001436 aacggttaagatttagtgtcaacgaatccgttgacacctggtgtcaacggatc 55001488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 202
Target Start/End: Complemental strand, 19080432 - 19080381
Alignment:
Q  151 atttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||||||||||||||||  ||||||||| ||| ||||| |||||||||||||    
T  19080432 atttggtgtcaacgaatccgttgacacctggtgtcaacagatcctgtctcat 19080381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 53148608 - 53148667
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctca 201  Q
    |||||| ||||||||||||||||||| |||||||||| | | |||| |||||||| ||||    
T  53148608 acggttgagatttggtgtcaacgaatctgttgacacctgatgtcaatggatcctgactca 53148667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 149 - 195
Target Start/End: Original strand, 2446165 - 2446211
Alignment:
Q  149 agatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    ||||||||||| ||||||| |||||||||| ||| ||||||||||||    
T  2446165 agatttggtgttaacgaatctgttgacacctggtgtcaacggatcct 2446211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 149 - 195
Target Start/End: Original strand, 5046486 - 5046532
Alignment:
Q  149 agatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    ||||||||||||||||||| |||||| ||| ||| ||||||||||||    
T  5046486 agatttggtgtcaacgaatctgttgatacctggtgtcaacggatcct 5046532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 30573706 - 30573760
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    |||||| |||||||||||||||||||  ||||||||| ||| |||| ||||||||    
T  30573706 acggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctg 30573760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 47687966 - 47687912
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||||||  ||||||||||||||||||| ||| ||||| ||| ||||||||||||    
T  47687966 aacggttgcgatttggtgtcaacgaattcgttaacacctggtgtcaacggatcct 47687912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 12920270 - 12920331
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    ||||||| ||||||||||||||||||| |||| | ||| ||| ||||| |||||| ||||||    
T  12920270 aacggttgagatttggtgtcaacgaatctgttaatacctggtgtcaaccgatcctatctcat 12920331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 24551919 - 24551980
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||| |||||||||||||||||| |||  ||||||||| ||| |||| ||||||| ||||||    
T  24551919 aacgtttaagatttggtgtcaacaaatccgttgacacctggtgtcaatggatcctatctcat 24551980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 40347608 - 40347551
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctca 201  Q
    |||| ||||||||||| |||| ||| ||||||||| ||| |||| |||||||||||||    
T  40347608 ggttgagatttggtgtaaacggattcgttgacacctggtgtcaatggatcctgtctca 40347551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 141; Significance: 1e-73; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 9540895 - 9541087
Alignment:
Q  7 agagaagaaggggtagaatgaaagaacagagaaattgagatcgcgatttggaaaagacagaaggacaatcgtgtgtgagtggttcacatgatattctaaa 106  Q
    |||||||||||||||| ||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9540895 agagaagaaggggtagcatgaacgaacagagaaattgagatcgcgtttttgaaaagacagaaggacaatcgtgtgtgagtggttcacatgatattctaaa 9540994  T
Q  107 tgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtct 199  Q
    ||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||| |  ||  |||||||||||||||    
T  9540995 tgaacaaatataagccatcggatcaaaagatatcaacggctaagatttggtgtcaacgaattcgttgacatctcgtgccaacggatcctgtct 9541087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 73 - 202
Target Start/End: Complemental strand, 9540456 - 9540327
Alignment:
Q  73 aatcgtgtgtgagtggttcacatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaatttgtt 172  Q
    ||||||||| || | | ||||||||| ||||||||||||||||||||||| || |||||| | | ||||| ||||||||||||||||||||||||| |||    
T  9540456 aatcgtgtgagaatagctcacatgattttctaaatgagcaaatataagccttcagatcaagagaaatcaatggttaagatttggtgtcaacgaattcgtt 9540357  T
Q  173 gacaccaggtctcaacggatcctgtctcat 202  Q
    |||||| ||| |||||||||||||||||||    
T  9540356 gacacctggtgtcaacggatcctgtctcat 9540327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 92 - 196
Target Start/End: Complemental strand, 8541857 - 8541753
Alignment:
Q  92 acatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacgga 191  Q
    |||||||||| |||||||  |||||||||   | ||||||||| | ||||||| ||||||||| ||||||||||||| ||||| ||| | | ||||||||    
T  8541857 acatgatattttaaatgaataaatataagtttttggatcaaaagaaatcaacgattaagattttgtgtcaacgaattcgttgagacctgatgtcaacgga 8541758  T
Q  192 tcctg 196  Q
    |||||    
T  8541757 tcctg 8541753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 24933890 - 24933834
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctc 200  Q
    |||| |||||||||||||| ||||| ||||||||||||| |||||||||||||||||    
T  24933890 ggttgagatttggtgtcaatgaattcgttgacaccaggtgtcaacggatcctgtctc 24933834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 22301868 - 22301919
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    ||||||||||||||||||||||||| ||||||||| ||| ||||||||||||    
T  22301868 ggttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 22301919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 9276328 - 9276386
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||| |||||||||||||||||||| ||||||||| ||| ||||||||||||| |||||    
T  9276328 ggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgactcat 9276386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 29719500 - 29719442
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||| |||||||||||||||||||  ||||||||| ||| |||||||||||||||||||    
T  29719500 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctcat 29719442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 33512167 - 33512093
Alignment:
Q  128 atcaaaatatatcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    ||||||| | ||||||| |||| |||| ||||||||||||| |||||||| |||| ||||||||||||| |||||    
T  33512167 atcaaaagaaatcaacgattaatatttagtgtcaacgaattcgttgacactaggtgtcaacggatcctgactcat 33512093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 166
Target Start/End: Complemental strand, 34812124 - 34812043
Alignment:
Q  84 agtggttcacatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaa 166  Q
    |||||||||||||||||| ||||||| ||||||||| || || ||| |||| | ||||| | |||||||||||||||||||||    
T  34812124 agtggttcacatgatatt-taaatgaacaaatataaaccttcagattaaaagaaatcaaagcttaagatttggtgtcaacgaa 34812043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 1296433 - 1296381
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    |||| |||||||||||||||||||| ||||||||| ||| |||||||||||||    
T  1296433 ggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctg 1296381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 15774256 - 15774205
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||| ||||||||||||||| |||| ||||||||||||| ||||||||||||    
T  15774256 ggttgagatttggtgtcaacaaattcgttgacaccaggtgtcaacggatcct 15774205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 151 - 202
Target Start/End: Complemental strand, 27177959 - 27177908
Alignment:
Q  151 atttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||| ||||||    
T  27177959 atttggtgtcaacgaattcgttgacacctggtgtcaacggatcctatctcat 27177908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 18174665 - 18174719
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    ||||||| |||||||||||||||||||| ||||||||| | | ||||||||||||    
T  18174665 aacggttgagatttggtgtcaacgaattcgttgacacctgatgtcaacggatcct 18174719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 26752721 - 26752771
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcc 194  Q
    |||||||||||| |||||||||||| ||||||||| ||| |||||||||||    
T  26752721 ggttaagatttgatgtcaacgaattcgttgacacctggtgtcaacggatcc 26752771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 38361121 - 38361063
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||| |||||||||||||||||||| ||||||||| | | |||||| ||||||||||||    
T  38361121 ggttgagatttggtgtcaacgaattcgttgacacctgatgtcaacgtatcctgtctcat 38361063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 29512420 - 29512367
Alignment:
Q  149 agatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    ||||||||||||||| |||| ||||||||||||| |||||||||| || |||||    
T  29512420 agatttggtgtcaacaaattcgttgacaccaggtgtcaacggatcatgactcat 29512367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 26589009 - 26589073
Alignment:
Q  138 atcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||||||||||| |||||| ||||||||||  ||||||||  ||| |||||||||||| ||||||    
T  26589009 atcaacggttaatatttggagtcaacgaatccgttgacacttggtgtcaacggatcctatctcat 26589073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 1297121 - 1297172
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||| |||||||||||||||||||  ||||||||| ||| ||||||||||||    
T  1297121 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 1297172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 177
Target Start/End: Complemental strand, 5761391 - 5761356
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacac 177  Q
    |||||||||||| |||||||||||||||||||||||    
T  5761391 acggttaagattcggtgtcaacgaatttgttgacac 5761356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 9275640 - 9275589
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||| |||||||||||||||||||  ||||||||| ||| ||||||||||||    
T  9275640 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 9275589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 11750314 - 11750260
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    ||||||| |||||||||||||||||||  ||||||||| ||| |||| |||||||    
T  11750314 aacggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatggatcct 11750260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 15902877 - 15902931
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||| ||||||||| ||||||||||||  ||||||||| ||| ||||||||||||    
T  15902877 aacgcttaagattttgtgtcaacgaatccgttgacacctggtgtcaacggatcct 15902931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 18174156 - 18174102
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||||||  ||||||||||||||||||| ||| ||||| ||| ||||||||||||    
T  18174156 aacggttgcgatttggtgtcaacgaattcgttaacacctggtgtcaacggatcct 18174102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 196
Target Start/End: Original strand, 20632854 - 20632960
Alignment:
Q  90 tcacatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacg 189  Q
    |||||||||||| ||| ||| ||||||||| || |  |||||||  | ||||||||| || ||||| |||||| | ||| ||| ||||| ||| ||||||    
T  20632854 tcacatgatattttaattgaacaaatataaacctttagatcaaacgaaatcaacggtcaatatttgatgtcaatggattcgttaacacctggtgtcaacg 20632953  T
Q  190 gatcctg 196  Q
    |||||||    
T  20632954 gatcctg 20632960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 22560564 - 22560618
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    |||||| |||||||||||||||||||  ||||||||| | | |||||||||||||    
T  22560564 acggttgagatttggtgtcaacgaatccgttgacacctgatgtcaacggatcctg 22560618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 149 - 195
Target Start/End: Original strand, 29559423 - 29559469
Alignment:
Q  149 agatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||||||||||||||||||| ||||||||| ||| ||||| ||||||    
T  29559423 agatttggtgtcaacgaattcgttgacacctggtgtcaacagatcct 29559469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 11751073 - 11751118
Alignment:
Q  150 gatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||||||||| |||||||| ||||||||| ||| ||||||||||||    
T  11751073 gatttggtgttaacgaattcgttgacacctggtgtcaacggatcct 11751118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 22559914 - 22559877
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacacca 179  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  22559914 acggttgagatttggtgtcaacgaatctgttgacacca 22559877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 23857028 - 23857073
Alignment:
Q  150 gatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||||||||||||| |||  ||||||||||||| ||||||||||||    
T  23857028 gatttggtgtcaaccaatccgttgacaccaggtgtcaacggatcct 23857073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 1e-33; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 2092780 - 2092943
Alignment:
Q  14 aaggggtagaatgaaagaacagagaaattgagatcgcgatttggaaaagacagaaggacaatcgtgtgtgagtggttcacatgatattctaaatgagcaa 113  Q
    ||||||||||||||||||| | | |||||||||||  | |||||| |||||||||||| ||| ||||||||||||||||||||||| | |||||||||||    
T  2092780 aaggggtagaatgaaagaaaaaa-aaattgagatcaagttttggagaagacagaaggataatagtgtgtgagtggttcacatgatagtttaaatgagcaa 2092878  T
Q  114 atataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaatttgttgacacca 179  Q
    |||||| | ||| ||| |||| | ||||||| |||||||||| |||||||||||  ||||||||||    
T  2092879 atataatctatcagat-aaaaaaaatcaacgattaagatttgatgtcaacgaatccgttgacacca 2092943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 84 - 202
Target Start/End: Complemental strand, 48648317 - 48648199
Alignment:
Q  84 agtggttcacatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaatttgttgacaccaggtc 183  Q
    |||||||||||||||||||||||||| |||||||||||| |  ||| |||| | ||||||||||||||||||||||||||||||  ||||||||| |||     
T  48648317 agtggttcacatgatattctaaatgaacaaatataagcctttagataaaaagaaatcaacggttaagatttggtgtcaacgaatccgttgacacctggtg 48648218  T
Q  184 tcaacggatcctgtctcat 202  Q
    ||||||||||||| |||||    
T  48648217 tcaacggatcctgactcat 48648199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 84 - 193
Target Start/End: Original strand, 51827433 - 51827542
Alignment:
Q  84 agtggttcacatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaatttgttgacaccaggtc 183  Q
    ||||||||| |||||||||||||||| |||||||||| | |  ||| |||| | ||||||||||||||||||||| ||||||||  |||||||||||||     
T  51827433 agtggttcatatgatattctaaatgaacaaatataagtctttagataaaaagaaatcaacggttaagatttggtgacaacgaatccgttgacaccaggtg 51827532  T
Q  184 tcaacggatc 193  Q
    ||||||||||    
T  51827533 tcaacggatc 51827542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 30222038 - 30222149
Alignment:
Q  85 gtggttcacatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaatttgttgacaccaggtct 184  Q
    |||||| |||||||||| ||||||| |||||||||||| || ||| |||| | ||||||| |||| ||||||| ||||||||| | |||||||| ||| |    
T  30222038 gtggtttacatgatattttaaatgaacaaatataagccttcagattaaaagaaatcaacgcttaaaatttggtatcaacgaatctattgacacctggtgt 30222137  T
Q  185 caacggatcctg 196  Q
    ||||| ||||||    
T  30222138 caacgaatcctg 30222149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 48649166 - 48649224
Alignment:
Q  138 atcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    |||||||||||||||||||||||||||||| |||||||||| ||| |||| ||||||||    
T  48649166 atcaacggttaagatttggtgtcaacgaatctgttgacacctggtgtcaatggatcctg 48649224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 13349471 - 13349418
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||    
T  13349471 acggttaagatttggtgtcaacgaatttgttgacacctggtatcaaccgatcct 13349418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 21727525 - 21727586
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||| ||||||||||||||||||||||  ||||||||| ||| |||||||||||||||||||    
T  21727525 aacgcttaagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctcat 21727586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 11651412 - 11651333
Alignment:
Q  85 gtggttcacatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacg 164  Q
    ||||||||||| ||||||| |||||  ||||||||||| |  |||||||| | |||||| ||||||||||||||||||||    
T  11651412 gtggttcacattatattcttaatgaataaatataagcctttagatcaaaagaaatcaacagttaagatttggtgtcaacg 11651333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 41458781 - 41458852
Alignment:
Q  92 acatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaac 163  Q
    |||||||||| |||||||  ||||||||||| | ||||||||| | ||||||| ||||||||||||||||||    
T  41458781 acatgatattttaaatgaataaatataagcctttggatcaaaagaaatcaacgattaagatttggtgtcaac 41458852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 200
Target Start/End: Original strand, 48507029 - 48507087
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctc 200  Q
    |||||| ||||||||||||||||||||  |||||||| ||| |||||||||||||||||    
T  48507029 acggttgagatttggtgtcaacgaattcattgacacctggtgtcaacggatcctgtctc 48507087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 37520560 - 37520612
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    |||| |||||||||||||||||||| ||||||||| ||| |||||||||||||    
T  37520560 ggttgagatttggtgtcaacgaattcgttgacacctggtatcaacggatcctg 37520612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 48506493 - 48506434
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||||| |||||||||||||||||||| |||||||||| || |||||||||| ||||||||    
T  48506493 acggttgagatttggtgtcaacgaattcgttgacacca-gtgtcaacggatcatgtctcat 48506434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 84 - 177
Target Start/End: Original strand, 6974685 - 6974775
Alignment:
Q  84 agtggttcacatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaatttgttgacac 177  Q
    ||||||| |||||||||| |||||||  ||||||||||| | ||||||||| | ||   || ||||||||||||||||||||||  ||||||||    
T  6974685 agtggttaacatgatattttaaatgaataaatataagcctttggatcaaaagaaat---cgattaagatttggtgtcaacgaatccgttgacac 6974775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 14871202 - 14871155
Alignment:
Q  149 agatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    |||||||||||||||||||| ||||||||| ||| |||||||||||||    
T  14871202 agatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctg 14871155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 981723 - 981673
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggat 192  Q
    |||||| |||||||||||||||||||| ||||||||| ||| |||||||||    
T  981723 acggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggat 981673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 13477111 - 13477053
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    ||||| ||||||||||||| ||||| ||||||||| ||| ||||||||||||| |||||    
T  13477111 ggttaggatttggtgtcaatgaattcgttgacacctggtgtcaacggatcctgactcat 13477053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 17603225 - 17603171
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||| ||||||||||||||||||||||  ||||||||| ||| ||||||||||||    
T  17603225 aacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 17603171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 20213528 - 20213582
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    ||||||| ||||||||||||||||||| || |||||| ||| |||||||||||||    
T  20213528 acggttaggatttggtgtcaacgaattcgtcgacacctggtgtcaacggatcctg 20213582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 48765063 - 48765121
Alignment:
Q  138 atcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    ||||||||||||||||||||||||||||||   |||||||| ||| |||| ||||||||    
T  48765063 atcaacggttaagatttggtgtcaacgaatccattgacacctggtgtcaatggatcctg 48765121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 20213037 - 20212976
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    ||||| || ||||||||||||||||||| ||||||||| ||| ||||||||| ||| |||||    
T  20213037 aacggataggatttggtgtcaacgaattcgttgacacctggtgtcaacggattctgactcat 20212976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 37988222 - 37988275
Alignment:
Q  149 agatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||||||||||||||||||| ||||||||| ||| |||| |||||||| |||||    
T  37988222 agatttggtgtcaacgaattcgttgacacctggtgtcaatggatcctgactcat 37988275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 45081402 - 45081459
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctca 201  Q
    |||| |||||||||||||||||||  |||||||| |||| ||||||||||||| ||||    
T  45081402 ggttgagatttggtgtcaacgaatccgttgacactaggtgtcaacggatcctgactca 45081459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 10847339 - 10847287
Alignment:
Q  150 gatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    ||||| |||| |||||||| ||||||||||||| ||||||||||||| |||||    
T  10847339 gatttagtgttaacgaattcgttgacaccaggtgtcaacggatcctgactcat 10847287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 11203206 - 11203258
Alignment:
Q  150 gatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||||||| |||||||||||||||||||| ||| ||||||||| ||| |||||    
T  11203206 gatttggtttcaacgaatttgttgacacctggtgtcaacggattctgactcat 11203258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 41458091 - 41458035
Alignment:
Q  140 caacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    |||||||| |||||||||||||||||||  ||||||||| ||| |||||| ||||||    
T  41458091 caacggttgagatttggtgtcaacgaatccgttgacacctggtatcaacgaatcctg 41458035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 48764533 - 48764473
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||||| |||||||||||||||||||| ||||||||| | | |||| |||||||| |||||    
T  48764533 acggttgagatttggtgtcaacgaattcgttgacacctgatgtcaatggatcctgactcat 48764473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 13477774 - 13477820
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaa 187  Q
    ||||||| |||||||||||||||||||| ||||||||| ||| ||||    
T  13477774 aacggttgagatttggtgtcaacgaattcgttgacacctggtgtcaa 13477820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 27082830 - 27082772
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    ||||| ||||||||||||||||||| |||||||||  || |||| |||||||| |||||    
T  27082830 ggttaggatttggtgtcaacgaattcgttgacacctagtgtcaatggatcctgactcat 27082772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 52266450 - 52266504
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    |||||| |||||||||||||||||||| ||| ||||| ||| | |||||||||||    
T  52266450 acggttgagatttggtgtcaacgaattcgttaacacctggtgttaacggatcctg 52266504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 17603957 - 17604018
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||| ||||||||||||||||||||||  ||||||||| ||| |||  ||||||| ||||||    
T  17603957 aacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcattggatcctatctcat 17604018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 194
Target Start/End: Original strand, 31115603 - 31115648
Alignment:
Q  149 agatttggtgtcaacgaatttgttgacaccaggtctcaacggatcc 194  Q
    ||||||||||||||||||| ||||||||||  || |||||||||||    
T  31115603 agatttggtgtcaacgaatctgttgacacctagtgtcaacggatcc 31115648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 37987319 - 37987238
Alignment:
Q  112 aaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatc 193  Q
    |||||| |||| | ||||||||  | |||||||| ||| |||||||||||||||||   |||||||| ||| ||||||||||    
T  37987319 aaatattagcctttggatcaaataaaatcaacggataaaatttggtgtcaacgaatccattgacacctggtgtcaacggatc 37987238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 54458670 - 54458715
Alignment:
Q  150 gatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||||||||||||| |||  ||||||||||||| ||||||||||||    
T  54458670 gatttggtgtcaaccaatccgttgacaccaggtgtcaacggatcct 54458715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 2e-32; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 7 - 162
Target Start/End: Complemental strand, 10926332 - 10926177
Alignment:
Q  7 agagaagaaggggtagaatgaaagaacagagaaattgagatcgcgatttggaaaagacagaaggacaatcgtgtgtgagtggttcacatgatattctaaa 106  Q
    |||||||||||||||||||| ||||| | | |||| |||||  ||  |||||| ||||||||||| ||||||||| |||| |||||||||||||||||||    
T  10926332 agagaagaaggggtagaatggaagaatataaaaatcgagatatcgtgttggaatagacagaaggataatcgtgtgagagtagttcacatgatattctaaa 10926233  T
Q  107 tgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaa 162  Q
    ||| |||||||||| | || |||||||| | |||||||||||  ||||||||||||    
T  10926232 tgaacaaatataagtcttcagatcaaaaaaaatcaacggttataatttggtgtcaa 10926177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 84 - 195
Target Start/End: Complemental strand, 33435453 - 33435342
Alignment:
Q  84 agtggttcacatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaatttgttgacaccaggtc 183  Q
    ||||||||||||||||||||||||||  ||||||||||| |  ||| |||| | |||||| |||||||||||||||||||||||  ||| |||||||||     
T  33435453 agtggttcacatgatattctaaatgaataaatataagcctttagataaaaagaaatcaacagttaagatttggtgtcaacgaatccgttaacaccaggtg 33435354  T
Q  184 tcaacggatcct 195  Q
    ||||||||||||    
T  33435353 tcaacggatcct 33435342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 78 - 162
Target Start/End: Original strand, 10927153 - 10927237
Alignment:
Q  78 tgtgtgagtggttcacatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaa 162  Q
    |||| ||||||||||||||| ||| ||||||||||||||| |||| ||||||||||| | |||||| ||||||||||||||||||    
T  10927153 tgtgagagtggttcacatgagattttaaatgagcaaatattagccttcggatcaaaagaaatcaacagttaagatttggtgtcaa 10927237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 2512496 - 2512433
Alignment:
Q  139 tcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    ||||||||||| |||||||||||||||||| ||||||| ||||| |||||||||||||||||||    
T  2512496 tcaacggttaatatttggtgtcaacgaattcgttgacatcaggtgtcaacggatcctgtctcat 2512433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 19323765 - 19323823
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||| |||||||||||||||||||| ||||||||| ||| |||||||||||||||||||    
T  19323765 ggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgtctcat 19323823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 73 - 200
Target Start/End: Complemental strand, 13255143 - 13255009
Alignment:
Q  73 aatcgtgtgtgagtggttcacatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtca-------acga 165  Q
    |||| |||| || ||||||| ||||| || |||||||||||||||||| | || |||||||| | |||||||||||| |||| ||||||       ||||    
T  13255143 aatcatgtgagaatggttcagatgattttttaaatgagcaaatataagtcttcagatcaaaagaaatcaacggttaaaatttagtgtcaacaaattacga 13255044  T
Q  166 atttgttgacaccaggtctcaacggatcctgtctc 200  Q
    ||| ||| ||||| ||| |||||||||||||||||    
T  13255043 attcgttaacacctggtgtcaacggatcctgtctc 13255009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 10171331 - 10171271
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||||| |||||||||||||||||||  ||||||||| ||| ||||||||||||| |||||    
T  10171331 acggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcat 10171271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 21133222 - 21133276
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||||||||||||||||||||||||||| ||| ||||  ||| ||||||||||||    
T  21133222 aacggttaagatttggtgtcaacgaattcgttaacacatggtgtcaacggatcct 21133276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 26529509 - 26529563
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    |||||| |||||||||||||||||||  ||||||||| ||| |||||||||||||    
T  26529509 acggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctg 26529563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 33436266 - 33436324
Alignment:
Q  138 atcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    ||||||| ||||||||||||||||||||||  ||||||| | ||| |||||||||||||    
T  33436266 atcaacgattaagatttggtgtcaacgaatccgttgacatctggtgtcaacggatcctg 33436324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 10171962 - 10172015
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||||| |||||||||||||||||||  ||||||||| ||| ||||||||||||    
T  10171962 acggttgagatttggtgtcaacgaatgcgttgacacctggtgtcaacggatcct 10172015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 26528878 - 26528825
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||||| |||||||||||||||||||  ||||||||| ||| ||||||||||||    
T  26528878 acggttgagatttggtgtcaacgaatgcgttgacacctggtgtcaacggatcct 26528825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 20833383 - 20833316
Alignment:
Q  111 caaatataagccatcggatcaaaatatatcaacggttaaga-tttggtgtcaacgaatttgttgacac 177  Q
    |||||||||||| || |||||||  | |||||||||||| | ||||||||||||||||| ||||||||    
T  20833383 caaatataagccttcagatcaaacgaaatcaacggttaataatttggtgtcaacgaattcgttgacac 20833316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 3623231 - 3623177
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    ||||||| |||||||||||||| ||||| ||||||||| | | ||||||||||||    
T  3623231 aacggttgagatttggtgtcaaagaattcgttgacacctgatgtcaacggatcct 3623177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 8488525 - 8488471
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    ||||||| |||||||||||||||||||  ||||||||| ||| |||| |||||||    
T  8488525 aacggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatggatcct 8488471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 150 - 196
Target Start/End: Original strand, 8489284 - 8489330
Alignment:
Q  150 gatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    |||||||||| |||||||| ||||||||| ||| |||||||||||||    
T  8489284 gatttggtgttaacgaattcgttgacacctggtgtcaacggatcctg 8489330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 19311823 - 19311877
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    |||| |||||||||||||||||||||  ||||||||| ||| |||||| ||||||    
T  19311823 acggataagatttggtgtcaacgaatccgttgacacctggtgtcaacgaatcctg 19311877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 20833959 - 20834017
Alignment:
Q  138 atcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    ||||||||| || |||||||||||||| ||| ||| ||||| ||| |||||||||||||    
T  20833959 atcaacggtcaatatttggtgtcaacggattcgttaacacctggtgtcaacggatcctg 20834017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 19654026 - 19653965
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    ||||||||||||||||||||||||| |   |||||||||||| ||||| |||| || |||||    
T  19654026 aacggttaagatttggtgtcaacgagtccattgacaccaggtgtcaacagatcttgactcat 19653965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 2e-20; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 25671964 - 25672075
Alignment:
Q  85 gtggttcacatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaatttgttgacaccaggtct 184  Q
    ||||||||||||||||| |||||||  ||||||||||| || ||| |||| | ||||||| ||||||||| |||||||||||| | |||||||  ||| |    
T  25671964 gtggttcacatgatattttaaatgaataaatataagccttcagatgaaaagaaatcaacgcttaagatttagtgtcaacgaatctattgacacttggtgt 25672063  T
Q  185 caacggatcctg 196  Q
    ||||||||||||    
T  25672064 caacggatcctg 25672075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 50271723 - 50271834
Alignment:
Q  85 gtggttcacatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaatttgttgacaccaggtct 184  Q
    ||||||||||| ||||||| |||||  ||||||||||| |  |||||||| | |||||| ||||||||||||||||||||||||  |||| ||| ||| |    
T  50271723 gtggttcacattatattcttaatgaataaatataagcctttagatcaaaagaaatcaacagttaagatttggtgtcaacgaattcattgatacctggtgt 50271822  T
Q  185 caacggatcctg 196  Q
    ||||||||||||    
T  50271823 caacggatcctg 50271834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 201
Target Start/End: Original strand, 34309223 - 34309286
Alignment:
Q  138 atcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctca 201  Q
    |||||||||| |||||||||||||||||||  ||||||||| ||| ||||||||||||||||||    
T  34309223 atcaacggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctca 34309286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 25469079 - 25469137
Alignment:
Q  138 atcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    ||||||||||||||||||||||||||||||  ||||||||| ||| |||||||||||||    
T  25469079 atcaacggttaagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctg 25469137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 28181588 - 28181535
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||||| |||||||||||||||||||| ||||||||||||| ||||||||||||    
T  28181588 acggttgagatttggtgtcaacgaattcgttgacaccaggtgtcaacggatcct 28181535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 30663972 - 30664033
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    ||||||| |||||||||||||||||||  ||||||||||||| ||||||||||||| |||||    
T  30663972 aacggttgagatttggtgtcaacgaatccgttgacaccaggtgtcaacggatcctgactcat 30664033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 27256705 - 27256769
Alignment:
Q  138 atcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||||||||| | |||||||||||||||||  ||||||||| ||| |||||||||||||||||||    
T  27256705 atcaacggttgaaatttggtgtcaacgaatacgttgacacctggtgtcaacggatcctgtctcat 27256769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 34308532 - 34308470
Alignment:
Q  138 atcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctc 200  Q
    |||||||||| | |||||||||||||||||  ||||||||| ||| |||||||||||||||||    
T  34308532 atcaacggttgaaatttggtgtcaacgaatacgttgacacctggtgtcaacggatcctgtctc 34308470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 37852601 - 37852524
Alignment:
Q  119 agccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    |||||| |||| ||| || |||||||| |  |||||||||| |||||||| ||||||||||||| |||||||||||||    
T  37852601 agccattggattaaattaaatcaacggatgtgatttggtgttaacgaattcgttgacaccaggtgtcaacggatcctg 37852524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 13262886 - 13262835
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||| |||||||||||||||||||| ||||||||| ||| ||||||||||||    
T  13262886 ggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 13262835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 71 - 178
Target Start/End: Complemental strand, 40022276 - 40022169
Alignment:
Q  71 acaatcgtgtgtgagtggttcacatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaatttg 170  Q
    ||||||||||  | ||||||||| || |||| ||||||| |||||| ||||  |  |||||||| | |||||||| ||| ||| |||||||||||||| |    
T  40022276 acaatcgtgtcagggtggttcacgtggtattttaaatgaacaaatacaagctcttagatcaaaagagatcaacgggtaacattaggtgtcaacgaattcg 40022177  T
Q  171 ttgacacc 178  Q
    ||||||||    
T  40022176 ttgacacc 40022169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 195
Target Start/End: Original strand, 4439210 - 4439256
Alignment:
Q  149 agatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||||||||||||||||||  ||||||||||||| ||||||||||||    
T  4439210 agatttggtgtcaacgaatccgttgacaccaggtgtcaacggatcct 4439256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 7406298 - 7406240
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||| |||||||||||||||||||| ||| ||||| ||| ||||||||||||| |||||    
T  7406298 ggttgagatttggtgtcaacgaattcgttaacacctggtgtcaacggatcctgactcat 7406240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 7559203 - 7559256
Alignment:
Q  149 agatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||||||||||||||| ||  ||||||||| ||| |||||||||||||||||||    
T  7559203 agatttggtgtcaacggatccgttgacacctggtgtcaacggatcctgtctcat 7559256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 200
Target Start/End: Complemental strand, 17171977 - 17171928
Alignment:
Q  151 atttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctc 200  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||| ||||    
T  17171977 atttggtgtcaacgaattcgttgacacctggtgtcaacggatcctatctc 17171928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 32038532 - 32038479
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||||| |||||||||||||||||||| ||||||||| ||| ||||| ||||||    
T  32038532 acggttgagatttggtgtcaacgaattcgttgacacctggtatcaaccgatcct 32038479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 30663414 - 30663350
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcatttt 205  Q
    ||||||| |||||||||||||||||||  ||||| ||| ||| ||||||||||||| ||| ||||    
T  30663414 aacggttgagatttggtgtcaacgaatccgttgatacctggtgtcaacggatcctgactcttttt 30663350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 4135543 - 4135594
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||||||||||||||||||||||| |||||||||| | |  |||||||||||    
T  4135543 ggttaagatttggtgtcaacgaatatgttgacacctgatgccaacggatcct 4135594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 11548848 - 11548801
Alignment:
Q  149 agatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    |||||| |||||||||||| |||||||||| ||| |||||||||||||    
T  11548848 agatttagtgtcaacgaatctgttgacacctggtgtcaacggatcctg 11548801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 202
Target Start/End: Original strand, 46391872 - 46391923
Alignment:
Q  151 atttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    ||||| |||||||||||  ||||||||| ||| |||||||||||||||||||    
T  46391872 atttgatgtcaacgaatccgttgacacctggtgtcaacggatcctgtctcat 46391923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 149 - 195
Target Start/End: Original strand, 4433851 - 4433897
Alignment:
Q  149 agatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||||||||||||||||||  ||||||||| ||| ||||||||||||    
T  4433851 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 4433897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 13263513 - 13263567
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    |||||| |||||||||||||||||||   |||||||| ||| |||||||||||||    
T  13263513 acggttgagatttggtgtcaacgaatccattgacacctggtgtcaacggatcctg 13263567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 25671229 - 25671171
Alignment:
Q  138 atcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    ||||| ||||| |||||||||| |||||||  ||| ||||||||| |||||||||||||    
T  25671229 atcaatggttaggatttggtgttaacgaatccgttaacaccaggtgtcaacggatcctg 25671171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 149 - 195
Target Start/End: Complemental strand, 49680859 - 49680813
Alignment:
Q  149 agatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||||||||||||||||||  ||||||||| ||| ||||||||||||    
T  49680859 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 49680813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 12760823 - 12760778
Alignment:
Q  150 gatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||||| ||| |||||||| ||||||||||||| ||||||||||||    
T  12760823 gatttgatgttaacgaattcgttgacaccaggtgtcaacggatcct 12760778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 24992026 - 24991965
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||| ||| ||||||||||||||||||  ||||||||| ||| |||| ||||||| ||||||    
T  24992026 aacgtttatgatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctatctcat 24991965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 28182069 - 28182122
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    ||||||||||||||||||||| ||||  ||||||||| ||| ||||| ||||||    
T  28182069 acggttaagatttggtgtcaaagaatccgttgacacctggtgtcaacagatcct 28182122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 36390372 - 36390417
Alignment:
Q  150 gatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    ||||||||||||||| ||| ||||||||| ||| ||||||||||||    
T  36390372 gatttggtgtcaacggattcgttgacacctggtgtcaacggatcct 36390417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 5e-18; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 85 - 192
Target Start/End: Original strand, 22799699 - 22799806
Alignment:
Q  85 gtggttcacatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaatttgttgacaccaggtct 184  Q
    ||||||||||| ||||||| |||||  ||||||||| | |  |||||||| | |||||| ||||||||||||||||||||||||  |||||||| ||| |    
T  22799699 gtggttcacattatattcttaatgaataaatataagtctttagatcaaaagaaatcaacagttaagatttggtgtcaacgaattcattgacacctggtgt 22799798  T
Q  185 caacggat 192  Q
    ||||||||    
T  22799799 caacggat 22799806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 19360468 - 19360532
Alignment:
Q  138 atcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||||||||||| |||||||||||||||||| ||||||||| ||| ||||||||||||| |||||    
T  19360468 atcaacggttaatatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgactcat 19360532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 19128826 - 19128765
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||||||||||||||||||||||||||  ||||||||| ||| ||||||||||||| |||||    
T  19128826 aacggttaagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcat 19128765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 166
Target Start/End: Complemental strand, 41045496 - 41045415
Alignment:
Q  85 gtggttcacatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaa 166  Q
    ||||||||||| ||||||| |||||  ||||||||||| |  |||||||| | |||||| ||||||||||||||||||||||    
T  41045496 gtggttcacattatattcttaatgaataaatataagcctttagatcaaaagaaatcaacagttaagatttggtgtcaacgaa 41045415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 237813 - 237877
Alignment:
Q  138 atcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||||||||||| |||||||||||||||||  ||||||||| ||| ||||||||||||| |||||    
T  237813 atcaacggttaatatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcat 237877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 1554081 - 1554137
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctc 200  Q
    ||||||||||||||||||||||||| ||||||||| ||| |||||||||||| ||||    
T  1554081 ggttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctatctc 1554137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 4084933 - 4084881
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    |||| |||||||||||||||||||| ||||||||||||| |||||||||||||    
T  4084933 ggttgagatttggtgtcaacgaattcgttgacaccaggtgtcaacggatcctg 4084881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 19359763 - 19359699
Alignment:
Q  138 atcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||||||||||| |||||||||||||||||  ||||||||| ||| ||||||||||||| |||||    
T  19359763 atcaacggttaatatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcat 19359699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 31082683 - 31082775
Alignment:
Q  85 gtggttcacatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaatttgttgacac 177  Q
    ||||||||||| ||||||| |||||  ||||||||||| |  |||||||| | |||||  ||||||||||||||||||||||||  |||||||    
T  31082683 gtggttcacattatattcttaatgaataaatataagcccttagatcaaaagaaatcaatagttaagatttggtgtcaacgaattcattgacac 31082775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 7632165 - 7632090
Alignment:
Q  127 gatcaaaatatatcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||||||||| || || || |||||||||||||||||||||  ||||||||| ||| |||||||||||| ||||||    
T  7632165 gatcaaaataaataaatggataagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctatctcat 7632090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 234760 - 234702
Alignment:
Q  138 atcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    |||||||||||| |||||||||||||||||  ||||||||| ||| |||||||||||||    
T  234760 atcaacggttaatatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctg 234702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 195
Target Start/End: Original strand, 19366505 - 19366615
Alignment:
Q  85 gtggttcacatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaatttgttgacaccaggtct 184  Q
    ||||||||||| ||||||| |||||  ||| ||||||| |  |||||||| | |||| | ||||||||||  ||||||||||||  |||||||| ||| |    
T  19366505 gtggttcacattatattcttaatgaataaacataagcctttagatcaaaagaaatcagcagttaagatttaatgtcaacgaattcattgacacctggtgt 19366604  T
Q  185 caacggatcct 195  Q
    |||||||||||    
T  19366605 caacggatcct 19366615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 66 - 195
Target Start/End: Original strand, 29088538 - 29088667
Alignment:
Q  66 gaaggacaatcgtgtgtgagtggttcacatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacga 165  Q
    |||||| |||| |||| |||  |||||| || |||| ||||||| |||| ||||||  |  |||||||| | |||||||||||| |||  ||||||||||    
T  29088538 gaaggataatcatgtgagagcagttcacttggtattttaaatgaacaaacataagctcttagatcaaaagagatcaacggttaacattaagtgtcaacga 29088637  T
Q  166 atttgttgacaccaggtctcaacggatcct 195  Q
    ||| | ||||| ||||| ||||||||||||    
T  29088638 attcgctgacatcaggtgtcaacggatcct 29088667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 6476789 - 6476845
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctc 200  Q
    |||| |||||||||||||||||||  ||||||||| ||| |||||||||||||||||    
T  6476789 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctc 6476845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 17071280 - 17071226
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    ||||||| |||||||||||||||||||| ||||||||| | | ||||||||||||    
T  17071280 aacggttgagatttggtgtcaacgaattcgttgacacctgatgtcaacggatcct 17071226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 27364485 - 27364543
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||| |||||||||||||||||||   |||||||| ||| |||||||||||||||||||    
T  27364485 ggttgagatttggtgtcaacgaatccattgacacctggtgtcaacggatcctgtctcat 27364543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 34600317 - 34600263
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    ||||||| |||||||||||||||||||| ||||||||| | | ||||||||||||    
T  34600317 aacggttgagatttggtgtcaacgaattcgttgacacctgatgtcaacggatcct 34600263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 1281892 - 1281831
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||| ||||||||||||||||||||||  ||||||||| ||| |||| ||||||| ||||||    
T  1281892 aacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctatctcat 1281831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 13306273 - 13306330
Alignment:
Q  150 gatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcatttttt 207  Q
    |||||| |||||||||||| ||||||| ||||| ||||||||||||| ||| ||||||    
T  13306273 gatttgatgtcaacgaattcgttgacatcaggtgtcaacggatcctgactcttttttt 13306330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 10554565 - 10554517
Alignment:
Q  154 tggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    ||||||||||||||  ||||||||| ||| |||||||||||||||||||    
T  10554565 tggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctcat 10554517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 28705875 - 28705935
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||||| |||||| ||||||||||||  ||||||||| ||| ||||||||||||| |||||    
T  28705875 acggttgagatttagtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcat 28705935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 1283485 - 1283548
Alignment:
Q  131 aaaatatatcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcc 194  Q
    |||||| || |||| ||||||||||||||||||||||  ||||||||| ||| |||||| ||||    
T  1283485 aaaataaatgaacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaacgaatcc 1283548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 29046077 - 29046030
Alignment:
Q  149 agatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    |||||||||||||||||||  ||||||||| ||| |||||||||||||    
T  29046077 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctg 29046030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 155
Target Start/End: Original strand, 31036082 - 31036153
Alignment:
Q  84 agtggttcacatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttg 155  Q
    |||||||||||| ||||||||||| | |||||||||||| |   ||||||| | ||||||| ||||||||||    
T  31036082 agtggttcacatcatattctaaatcaacaaatataagcctttatatcaaaagaaatcaacgattaagatttg 31036153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 33005580 - 33005525
Alignment:
Q  138 atcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatc 193  Q
    ||||||||||||||||| |||||||||||||  |||||||  ||| ||||||||||    
T  33005580 atcaacggttaagattttgtgtcaacgaattcattgacacttggtgtcaacggatc 33005525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 2314003 - 2313949
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||| ||||||||||||||||| |||| |||||||||| ||| |||| |||||||    
T  2314003 aacgtttaagatttggtgtcaatgaatctgttgacacctggtgtcaatggatcct 2313949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 17071789 - 17071843
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||||||  ||||||||||||||||||| ||| ||||| ||| ||||||||||||    
T  17071789 aacggttgcgatttggtgtcaacgaattcgttaacacctggtgtcaacggatcct 17071843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 202
Target Start/End: Original strand, 235421 - 235534
Alignment:
Q  90 tcacatgata-ttctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaac 188  Q
    |||||||||| || ||| ||| ||||| ||| ||||  |||||||  | |||||||||||| ||||| |||||||||||  ||| ||| | ||| |||||    
T  235421 tcacatgatacttttaattgaacaaatgtaaaccattagatcaaacgaaatcaacggttaatatttgatgtcaacgaatccgttaacatccggtgtcaac 235520  T
Q  189 ggatcctgtctcat 202  Q
    |||||||| |||||    
T  235521 ggatcctgactcat 235534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 235647 - 235594
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||||| |||||||||||||||||||  ||||||||| ||| |||| |||||||    
T  235647 acggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatggatcct 235594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 202
Target Start/End: Complemental strand, 237151 - 237038
Alignment:
Q  90 tcacatgata-ttctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaac 188  Q
    |||||||||| || ||| ||| ||||| ||| ||||  |||||||  | |||||||||||| ||||| |||||||||||  ||| ||| | ||| |||||    
T  237151 tcacatgatacttttaattgaacaaatgtaaaccattagatcaaacgaaatcaacggttaatatttgatgtcaacgaatccgttaacatccggtgtcaac 237052  T
Q  189 ggatcctgtctcat 202  Q
    |||||||| |||||    
T  237051 ggatcctgactcat 237038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 2e-17; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 31954233 - 31954327
Alignment:
Q  85 gtggttcacatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaatttgttgacacca 179  Q
    ||||||||||||||||||||||| | ||||| |||||| |   || |||| | ||||||||||||||||||||||||||||||  ||||||||||    
T  31954233 gtggttcacatgatattctaaatcaacaaatgtaagcctttaaataaaaagaaatcaacggttaagatttggtgtcaacgaatccgttgacacca 31954327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 30661448 - 30661512
Alignment:
Q  138 atcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||||||||| |||||||||||||||||||  ||||||||| ||| |||||||||||||||||||    
T  30661448 atcaacggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctcat 30661512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 1417661 - 1417602
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcatt 203  Q
    ||||||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||||    
T  1417661 ggttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctatctcatt 1417602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 37949664 - 37949602
Alignment:
Q  138 atcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctc 200  Q
    |||||||||| |||||||||||||||||||  ||||||||| ||| |||||||||||||||||    
T  37949664 atcaacggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctc 37949602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 13785589 - 13785650
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||| ||||||||||||||||||||||  ||||||||| ||| |||||||||||||||||||    
T  13785589 aacgcttaagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctcat 13785650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 25599081 - 25599012
Alignment:
Q  138 atcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcatttttt 207  Q
    ||||||| || |||||||||||||||||||  ||||||||| ||| ||||||||||||| ||||||||||    
T  25599081 atcaacgattgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatttttt 25599012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 19068388 - 19068452
Alignment:
Q  138 atcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||||||||| | |||||||||||||||||  ||||||||| ||| |||||||||||||||||||    
T  19068388 atcaacggttgaaatttggtgtcaacgaatacgttgacacctggtgtcaacggatcctgtctcat 19068452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 38225974 - 38226030
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctc 200  Q
    ||||||||||||||||||||||||| ||||||||| ||| |||||||||||| ||||    
T  38225974 ggttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctatctc 38226030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 200
Target Start/End: Original strand, 3689276 - 3689326
Alignment:
Q  150 gatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctc 200  Q
    |||||||||||||||||| |||||||| ||||| |||||||||||||||||    
T  3689276 gatttggtgtcaacgaatctgttgacatcaggtgtcaacggatcctgtctc 3689326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 45099890 - 45099950
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||||||| |||||||||||||||||  ||||||||| ||| ||||||||||||| |||||    
T  45099890 acggttaaaatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcat 45099950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 138 - 197
Target Start/End: Complemental strand, 19067696 - 19067637
Alignment:
Q  138 atcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgt 197  Q
    |||||||||| |||||||||||||||||||  ||||||||  ||| ||||||||||||||    
T  19067696 atcaacggttgagatttggtgtcaacgaatccgttgacacgtggtgtcaacggatcctgt 19067637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 21496979 - 21497034
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    ||||||| |||||||||||||||||||| ||||||||| | | |||||||||||||    
T  21496979 aacggttgagatttggtgtcaacgaattcgttgacacctgttgtcaacggatcctg 21497034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 27948499 - 27948448
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||| |||||||||||||||||||| ||||||||| ||| ||||||||||||    
T  27948499 ggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 27948448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 111 - 202
Target Start/End: Complemental strand, 36378898 - 36378807
Alignment:
Q  111 caaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    ||||||| |||| | ||||||||  | |||||||| ||| |||||||||||||||||  || |||||||||| ||||| ||||||| |||||    
T  36378898 caaatattagcctttggatcaaataaaatcaacggataaaatttggtgtcaacgaatccgtcgacaccaggtgtcaacagatcctgactcat 36378807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 26636158 - 26636104
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    |||||| |||||||||||||||||||  ||||||||| ||| |||||||||||||    
T  26636158 acggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctg 26636104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 40273616 - 40273562
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    ||||||| ||||||||||||||||||||  |||||||| ||| ||||||||||||    
T  40273616 aacggttgagatttggtgtcaacgaattcattgacacctggtgtcaacggatcct 40273562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 46428240 - 46428182
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||| |||||||||||||||||||  ||||||||| ||| ||||||||||||| |||||    
T  46428240 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcat 46428182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 3029203 - 3029248
Alignment:
Q  150 gatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||||||    
T  3029203 gatttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 3029248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 3772523 - 3772576
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||||| |||||||||||||||||||  ||||||||| ||| ||||||||||||    
T  3772523 acggttgagatttggtgtcaacgaatacgttgacacctggtgtcaacggatcct 3772576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 47719700 - 47719761
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||| ||||||||||||||||||||||  ||||||||| ||| |||| ||||||| ||||||    
T  47719700 aacgtttaagatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctatctcat 47719761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 7668535 - 7668483
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    |||| |||||||||||||||||||  ||||||||| ||| |||||||||||||    
T  7668535 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctg 7668483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 23889799 - 23889863
Alignment:
Q  138 atcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||||| | ||| |||||||||||||||||| |||||||||||||  ||||||||| || |||||    
T  23889799 atcaacagataaaatttggtgtcaacgaattcgttgacaccaggtgccaacggatcttgactcat 23889863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 23901095 - 23901151
Alignment:
Q  146 ttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    ||||||||| ||||||||||||| ||||||||| ||| |||| ||||||| ||||||    
T  23901095 ttaagatttagtgtcaacgaattcgttgacacctggtgtcaatggatcctatctcat 23901151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 25343238 - 25343290
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    |||| ||||||||||||||||||||  |||||||| ||| |||||||||||||    
T  25343238 ggttgagatttggtgtcaacgaattcattgacacctggtgtcaacggatcctg 25343290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 3688434 - 3688379
Alignment:
Q  147 taagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||||||||||||||||||||  ||||| | | ||| |||||||||||||||||||    
T  3688434 taagatttggtgtcaacgaatccgttgatatctggtgtcaacggatcctgtctcat 3688379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 25342550 - 25342499
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||| |||||||||||||||||||  ||||||||| ||| ||||||||||||    
T  25342550 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 25342499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 25343356 - 25343305
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||| |||||||||||||||||||  ||||||||| ||| ||||||||||||    
T  25343356 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 25343305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 31954369 - 31954302
Alignment:
Q  112 aaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaatttgttgacacca 179  Q
    |||||| |||| | ||||||||  | ||||||| ||||||||||||||||||| ||| ||||||||||    
T  31954369 aaatattagcctttggatcaaatgaaatcaacgattaagatttggtgtcaacggattcgttgacacca 31954302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 31955157 - 31955267
Alignment:
Q  85 gtggttcacatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaatttgttgacaccaggtct 184  Q
    ||||||||||| ||||||| |||||  ||||||||||  |  |||||||| | |||||| ||||||||||  |||||||||||   ||||||||  || |    
T  31955157 gtggttcacattatattcttaatgaataaatataagcttttagatcaaaagaaatcaacagttaagatttaatgtcaacgaatcaattgacacc-tgtgt 31955255  T
Q  185 caacggatcctg 196  Q
    ||||||||||||    
T  31955256 caacggatcctg 31955267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 196
Target Start/End: Original strand, 46428821 - 46428868
Alignment:
Q  149 agatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    ||||||| |||||||||||| ||||||||| ||| |||||||||||||    
T  46428821 agatttgatgtcaacgaattcgttgacacctggtgtcaacggatcctg 46428868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 26636857 - 26636911
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    |||||| |||||||||||||||||||  |||||||||  || |||||||||||||    
T  26636857 acggttgagatttggtgtcaacgaatccgttgacaccttgtgtcaacggatcctg 26636911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 149 - 195
Target Start/End: Complemental strand, 30660641 - 30660595
Alignment:
Q  149 agatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||||||||||||||||||  ||||||||| ||| ||||||||||||    
T  30660641 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 30660595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 149 - 195
Target Start/End: Original strand, 37950471 - 37950517
Alignment:
Q  149 agatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||||||||||||||||||  ||||||||| ||| ||||||||||||    
T  37950471 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 37950517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 43065098 - 43065164
Alignment:
Q  127 gatcaaaatatatcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatc 193  Q
    |||||||||| || || ||  ||||||||||||||||||||  ||||||||| ||| ||||||||||    
T  43065098 gatcaaaataaataaagggacaagatttggtgtcaacgaatccgttgacacctggtgtcaacggatc 43065164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 14305146 - 14305085
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||| ||||||||||||||||| ||||  |||||||||  || |||||||||||| ||||||    
T  14305146 aacgtttaagatttggtgtcaatgaatccgttgacacctagtgtcaacggatcctatctcat 14305085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 25599823 - 25599876
Alignment:
Q  149 agatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||||||||||||| |||| | |||||||| ||| ||||||||||||| |||||    
T  25599823 agatttggtgtcaatgaatctattgacacctggtgtcaacggatcctgactcat 25599876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 3)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 22063 - 22125
Alignment:
Q  138 atcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctc 200  Q
    |||||||||||| |||||||||||||||||  ||||||||| ||| |||||||||||||||||    
T  22063 atcaacggttaaaatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctc 22125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 15078 - 15019
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctca 201  Q
    |||||| |||||||||||||| ||||  |||||||| |||| ||||||||||||| ||||    
T  15078 acggttgagatttggtgtcaatgaatccgttgacactaggtgtcaacggatcctgactca 15019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 15137 - 15083
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    |||||| |||||||||||||| ||||  |||||||| |||| |||||||||||||    
T  15137 acggttgagatttggtgtcaatgaatccgttgacactaggtgtcaacggatcctg 15083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 17724813 - 17724761
Alignment:
Q  150 gatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  17724813 gatttggtgtcaacgaatctgttgacaccaggtgtcaactgatcctgtctcat 17724761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 3043296 - 3043245
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  3043296 ggttaggatttggtgtcaatgaatttgttgacaccaggtgtcaacggatcct 3043245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 8372973 - 8372915
Alignment:
Q  138 atcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    ||||||| |||| |||||||||||||||||  ||||||||||||| |||||||||||||    
T  8372973 atcaacgattaatatttggtgtcaacgaatccgttgacaccaggtgtcaacggatcctg 8372915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 27441520 - 27441462
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||||||||||| |||||||||||| ||||||||| ||| |||||||||||| ||||||    
T  27441520 ggttaagatttgatgtcaacgaattcgttgacacctggtgtcaacggatcctatctcat 27441462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 11686960 - 11687013
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||||| |||||| ||||||||||||| ||||||||||||| ||||||||||||    
T  11686960 acggttgagatttagtgtcaacgaattcgttgacaccaggtgtcaacggatcct 11687013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 531422 - 531494
Alignment:
Q  92 acatgatattctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacg 164  Q
    |||||||||| |||||||  ||||||||||| | ||||||||| | ||| ||| |||||||||||||||||||    
T  531422 acatgatattttaaatgaataaatataagcctttggatcaaaagaaatccacgattaagatttggtgtcaacg 531494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 39860169 - 39860106
Alignment:
Q  141 aacggttaagatttggtgtcaacgaat--ttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||| ||||||||||||||||||||||  ||||||||||| ||| ||||||||||||| |||||    
T  39860169 aacgcttaagatttggtgtcaacgaatccttgttgacacctggtgtcaacggatcctgcctcat 39860106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 37732883 - 37732828
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    |||| ||||| ||||||||||||||||  ||||||||||||| |||||||||||||    
T  37732883 aacgcttaagttttggtgtcaacgaatccgttgacaccaggtgtcaacggatcctg 37732828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 3043960 - 3044014
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    ||||||||| |||||||||||||||||| ||||||||| ||| || |||||||||    
T  3043960 aacggttaacatttggtgtcaacgaattcgttgacacctggtgtcgacggatcct 3044014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 3417411 - 3417353
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    ||||||||||||||||||||||||| ||| ||||||| | ||||| ||||||| |||||    
T  3417411 ggttaagatttggtgtcaacgaattcgttaacaccagatgtcaacagatcctgactcat 3417353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 8373685 - 8373743
Alignment:
Q  138 atcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    |||||||||||| |||||||||||||||||  ||||||||  ||| |||||||||||||    
T  8373685 atcaacggttaatatttggtgtcaacgaatccgttgacacttggtgtcaacggatcctg 8373743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 9197816 - 9197870
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    ||||||| ||||||||||||||||||| ||||||||  ||| |||||||||||||    
T  9197816 acggttaggatttggtgtcaacgaattcgttgacacttggtgtcaacggatcctg 9197870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 200
Target Start/End: Original strand, 17725658 - 17725708
Alignment:
Q  150 gatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctc 200  Q
    ||||||||||||||||||| ||||||||| | | |||||||||||||||||    
T  17725658 gatttggtgtcaacgaattcgttgacacctgctgtcaacggatcctgtctc 17725708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 31641571 - 31641513
Alignment:
Q  138 atcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    ||||||||||||||||||||||||||||||   |||||||| ||| |||| ||||||||    
T  31641571 atcaacggttaagatttggtgtcaacgaatccattgacacctggtgtcaatggatcctg 31641513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 9197152 - 9197091
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    ||||| || ||||||||||||||||||| ||||||||| ||| ||||||||| ||| |||||    
T  9197152 aacggataggatttggtgtcaacgaattcgttgacacctggtgtcaacggattctgactcat 9197091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 26652341 - 26652288
Alignment:
Q  150 gatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcatt 203  Q
    |||||||||| |||||||| ||||||||| ||| ||||||||||||| ||||||    
T  26652341 gatttggtgttaacgaattcgttgacacctggtgtcaacggatcctgactcatt 26652288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 31602072 - 31602019
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||||| |||||||||||||||||||| ||||||||| ||| ||||| ||||||    
T  31602072 acggttgagatttggtgtcaacgaattcgttgacacctggtgtcaaccgatcct 31602019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 32414519 - 32414580
Alignment:
Q  141 aacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||| ||||||||||||||||||||||  ||||||||| ||| ||||| |||||| ||||||    
T  32414519 aacgcttaagatttggtgtcaacgaatccgttgacacctggtgtcaacagatcctttctcat 32414580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 41974689 - 41974636
Alignment:
Q  149 agatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||||||||||||||||||  ||||||||| ||| ||||||||||||| |||||    
T  41974689 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcat 41974636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 31642083 - 31642143
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||||| |||||||||||||||||||| ||||||| | ||| |||| |||||||| |||||    
T  31642083 acggttgagatttggtgtcaacgaattcgttgacatctggtgtcaatggatcctgactcat 31642143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 15198289 - 15198340
Alignment:
Q  145 gttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    ||||| ||||||||||||| |||| ||||||||||||| |||| ||||||||    
T  15198289 gttaaaatttggtgtcaacaaattcgttgacaccaggtgtcaaaggatcctg 15198340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 26654374 - 26654425
Alignment:
Q  142 acggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatc 193  Q
    ||||||||||||||||||||||||||   |||||||| ||| ||||||||||    
T  26654374 acggttaagatttggtgtcaacgaatccattgacacctggtgtcaacggatc 26654425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 38576300 - 38576351
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcct 195  Q
    |||| |||||||||||||||||||  ||||||||| ||| ||||||||||||    
T  38576300 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 38576351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 8996972 - 8997030
Alignment:
Q  144 ggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||| ||||||||||||||| |||  ||||||||| ||| ||||||||||||| |||||    
T  8996972 ggttgagatttggtgtcaacaaatcagttgacacctggtatcaacggatcctgactcat 8997030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 146 - 196
Target Start/End: Complemental strand, 22320426 - 22320376
Alignment:
Q  146 ttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    ||||||||||||||||||||||  ||||||||| ||  |||||||||||||    
T  22320426 ttaagatttggtgtcaacgaatccgttgacacctggcatcaacggatcctg 22320376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 3165125 - 3165178
Alignment:
Q  149 agatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    |||||||||||||||||||  ||||||||| | | ||||||||||||| |||||    
T  3165125 agatttggtgtcaacgaatccgttgacacctgatgtcaacggatcctgactcat 3165178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 6891 - 6941
Alignment:
Q  152 tttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||| |||||    
T  6891 tttggtgtcaacgaatttgttgacacctggtgtcaacggatcctgactcat 6941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 202
Target Start/End: Complemental strand, 40004 - 39891
Alignment:
Q  90 tcacatgata-ttctaaatgagcaaatataagccatcggatcaaaatatatcaacggttaagatttggtgtcaacgaatttgttgacaccaggtctcaac 188  Q
    |||||||||| || ||| ||| ||||| ||| ||||  |||||||  | ||||||| |||| |||||||||||||||||  ||||||||| ||| |||||    
T  40004 tcacatgatacttttaattgaacaaatgtaaaccattagatcaaacgaaatcaacgattaatatttggtgtcaacgaatccgttgacacctggtgtcaac 39905  T
Q  189 ggatcctgtctcat 202  Q
    |||| ||| |||||    
T  39904 ggattctgactcat 39891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 428899 - 428952
Alignment:
Q  143 cggttaagatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctg 196  Q
    ||||| |||||||||||||||||||| ||||| ||| ||| |||||||||||||    
T  428899 cggttgagatttggtgtcaacgaattcgttgataccgggtgtcaacggatcctg 428952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 26639 - 26587
Alignment:
Q  150 gatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgtctcat 202  Q
    ||||||||||||||||||  ||||||||| ||| ||||||||||||| |||||    
T  26639 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcat 26587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1207 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold1207
Description:

Target: scaffold1207; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 1634 - 1587
Alignment:
Q  150 gatttggtgtcaacgaatttgttgacaccaggtctcaacggatcctgt 197  Q
    ||||||||||||||||||| ||||||||| ||| ||||| ||||||||    
T  1634 gatttggtgtcaacgaattcgttgacacctggtgtcaaccgatcctgt 1587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University