View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11862_low_15 (Length: 240)
Name: NF11862_low_15
Description: NF11862
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11862_low_15 |
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Alignment Details
Target: chr4 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 3 - 200
Target Start/End: Complemental strand, 44288753 - 44288556
Alignment:
| Q |
3 |
tgtttggtcattagtatattatgaaaataatcaaaagttgaattagtgaaaagcggtgtttgtaatgagttattaagcaaagtaactcatctaacaatta |
102 |
Q |
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| T |
44288753 |
tgtttggtcattagtatattatgaaaataatcaaaagttgaattagtgaaaagcggtgtttgtaatgagttattaagcagagtaactcatctaacaatta |
44288654 |
T |
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| Q |
103 |
cttatgaagtcaatacatctcattcataagtagatgtaatatagtaccaacaattgattggttcaagtgataagagactcagatcctttaaataagtg |
200 |
Q |
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| T |
44288653 |
cttatgaagtcaatacatctcattcataaatagatgtaatatagtaccaacaattgattggttcaagtggtaagagacttggaccccttaaataagtg |
44288556 |
T |
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