View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11863_high_5 (Length: 283)
Name: NF11863_high_5
Description: NF11863
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11863_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 5 - 270
Target Start/End: Original strand, 8905221 - 8905486
Alignment:
| Q |
5 |
gcaatagaagaaggtctaataaacacacaaggatggaacaatcctttaatccacatagcctcgaccgggggctattgttccaccatatcaatagatttca |
104 |
Q |
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| T |
8905221 |
gcaatagaagaaggtctaataaacacacaaggatggaacaatcctttaatccacatagcctcaaccgggggctattgttccaccatattaatagatttca |
8905320 |
T |
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| Q |
105 |
cattatttaataatcaaagactaagaataatttatatccaaacataaatattatcataaaactcaccataaatggcaatctaattgaataaattccatgt |
204 |
Q |
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| T |
8905321 |
cattatttaataatcaaagactaagaataatttatatccaaacataaatattatcataaaactcaccatatatggcaatctaattgaataaattccatgt |
8905420 |
T |
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| Q |
205 |
gctttatagaaatattgtagtttttgtccatcttactatttgtgtttataaagaacaagagaaatg |
270 |
Q |
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| T |
8905421 |
gctttatagaaatattgtagtttttgtccatcttactatttgtgtttataaagaacaagagaaatg |
8905486 |
T |
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