View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11864_high_25 (Length: 235)

Name: NF11864_high_25
Description: NF11864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11864_high_25
NF11864_high_25
[»] chr1 (32 HSPs)
chr1 (37-119)||(2801949-2802033)
chr1 (106-174)||(2802054-2802122)
chr1 (1-37)||(2801887-2801923)
chr1 (173-235)||(30290265-30290327)
chr1 (173-210)||(39750381-39750418)
chr1 (170-210)||(52431174-52431214)
chr1 (171-210)||(4102714-4102753)
chr1 (172-210)||(11741396-11741434)
chr1 (173-207)||(36695118-36695152)
chr1 (173-207)||(36711219-36711253)
chr1 (172-210)||(37951949-37951987)
chr1 (172-210)||(39497432-39497470)
chr1 (172-210)||(45039411-45039449)
chr1 (172-210)||(50007974-50008012)
chr1 (173-210)||(943637-943674)
chr1 (173-210)||(1039381-1039418)
chr1 (173-210)||(1046287-1046324)
chr1 (173-210)||(15811232-15811269)
chr1 (173-235)||(16456636-16456698)
chr1 (173-210)||(23541979-23542016)
chr1 (173-210)||(36694854-36694891)
chr1 (173-210)||(36710955-36710992)
chr1 (173-210)||(38261340-38261377)
chr1 (173-210)||(39363194-39363231)
chr1 (173-210)||(44649629-44649666)
chr1 (173-210)||(46075867-46075904)
chr1 (173-210)||(49907021-49907058)
chr1 (170-235)||(9413300-9413365)
chr1 (170-210)||(25509206-25509246)
chr1 (174-210)||(30289862-30289898)
chr1 (170-206)||(39362931-39362967)
chr1 (170-206)||(39750118-39750154)
[»] chr3 (38 HSPs)
chr3 (173-235)||(46878414-46878476)
chr3 (171-206)||(26306352-26306387)
chr3 (171-210)||(43701176-43701215)
chr3 (172-235)||(7181349-7181412)
chr3 (173-235)||(14428610-14428672)
chr3 (173-206)||(37728977-37729010)
chr3 (173-235)||(45048997-45049059)
chr3 (166-210)||(37728706-37728750)
chr3 (171-210)||(32467423-32467462)
chr3 (171-210)||(43868101-43868140)
chr3 (179-235)||(53686972-53687028)
chr3 (172-210)||(12050392-12050430)
chr3 (172-210)||(22103929-22103967)
chr3 (172-210)||(25149122-25149160)
chr3 (172-235)||(27687985-27688048)
chr3 (171-209)||(29454787-29454825)
chr3 (172-210)||(35868083-35868121)
chr3 (172-206)||(36099228-36099262)
chr3 (172-210)||(44543781-44543819)
chr3 (173-211)||(46049985-46050023)
chr3 (172-235)||(48909871-48909934)
chr3 (172-210)||(51284062-51284100)
chr3 (172-210)||(53271592-53271630)
chr3 (173-207)||(54604591-54604625)
chr3 (173-210)||(6784463-6784500)
chr3 (173-210)||(9499497-9499534)
chr3 (173-210)||(10220933-10220970)
chr3 (170-207)||(18657684-18657721)
chr3 (173-210)||(21756486-21756523)
chr3 (173-210)||(26593765-26593802)
chr3 (173-210)||(35165962-35165999)
chr3 (173-210)||(45252773-45252810)
chr3 (173-235)||(50647919-50647981)
chr3 (173-206)||(51283802-51283835)
chr3 (173-209)||(4024052-4024088)
chr3 (178-210)||(8546909-8546941)
chr3 (170-210)||(20862193-20862233)
chr3 (183-211)||(22527620-22527648)
[»] chr2 (25 HSPs)
chr2 (173-235)||(23788969-23789031)
chr2 (171-210)||(8841657-8841696)
chr2 (172-235)||(40607701-40607764)
chr2 (173-235)||(27560206-27560268)
chr2 (170-210)||(34062665-34062705)
chr2 (171-210)||(20252208-20252247)
chr2 (171-210)||(41450514-41450553)
chr2 (172-235)||(9701069-9701132)
chr2 (172-210)||(11201682-11201720)
chr2 (173-211)||(18970728-18970766)
chr2 (172-210)||(34883848-34883886)
chr2 (172-210)||(44573882-44573920)
chr2 (173-210)||(2438225-2438262)
chr2 (173-210)||(7491844-7491881)
chr2 (173-210)||(8716892-8716929)
chr2 (173-206)||(11201947-11201980)
chr2 (173-210)||(15404707-15404744)
chr2 (173-210)||(16669626-16669663)
chr2 (173-210)||(17408294-17408331)
chr2 (173-210)||(36131028-36131065)
chr2 (173-234)||(7116275-7116336)
chr2 (170-206)||(16108212-16108248)
chr2 (170-235)||(31751066-31751131)
chr2 (170-210)||(34113528-34113568)
chr2 (170-206)||(39833736-39833772)
[»] chr5 (19 HSPs)
chr5 (163-210)||(14913638-14913685)
chr5 (170-235)||(3028010-3028075)
chr5 (170-210)||(6673228-6673268)
chr5 (170-210)||(26894873-26894913)
chr5 (171-210)||(22527690-22527729)
chr5 (171-210)||(40004409-40004448)
chr5 (172-210)||(16127258-16127296)
chr5 (171-209)||(34662202-34662240)
chr5 (173-210)||(1265949-1265986)
chr5 (173-235)||(3497775-3497837)
chr5 (173-210)||(5527974-5528011)
chr5 (173-210)||(9828393-9828430)
chr5 (173-235)||(21069637-21069699)
chr5 (170-211)||(23260137-23260178)
chr5 (161-210)||(32478126-32478175)
chr5 (165-210)||(41384172-41384217)
chr5 (173-209)||(7951562-7951598)
chr5 (170-210)||(16440928-16440968)
chr5 (170-210)||(32147291-32147331)
[»] chr8 (26 HSPs)
chr8 (172-235)||(32675732-32675795)
chr8 (173-210)||(11798605-11798642)
chr8 (170-210)||(18754141-18754181)
chr8 (170-235)||(26016566-26016631)
chr8 (170-206)||(32475231-32475267)
chr8 (172-210)||(8251933-8251971)
chr8 (172-210)||(13153927-13153965)
chr8 (172-210)||(28572045-28572083)
chr8 (172-210)||(28579638-28579676)
chr8 (172-210)||(34568489-34568527)
chr8 (173-211)||(39029178-39029216)
chr8 (173-210)||(51095-51132)
chr8 (173-210)||(1774342-1774379)
chr8 (173-210)||(2944272-2944309)
chr8 (173-210)||(8951428-8951465)
chr8 (170-211)||(12802608-12802649)
chr8 (172-209)||(13568906-13568943)
chr8 (173-206)||(17856517-17856550)
chr8 (173-235)||(19176136-19176198)
chr8 (173-210)||(28192175-28192212)
chr8 (169-206)||(40530410-40530447)
chr8 (173-235)||(42885054-42885116)
chr8 (171-207)||(17856779-17856815)
chr8 (170-235)||(23487061-23487126)
chr8 (170-210)||(38781141-38781181)
chr8 (170-210)||(40529304-40529344)
[»] chr7 (20 HSPs)
chr7 (172-235)||(39871588-39871651)
chr7 (173-210)||(41003154-41003191)
chr7 (170-210)||(38858295-38858335)
chr7 (171-210)||(29286037-29286076)
chr7 (171-210)||(36698131-36698170)
chr7 (164-206)||(20075111-20075153)
chr7 (172-210)||(32814432-32814470)
chr7 (172-210)||(33858866-33858904)
chr7 (173-210)||(19920563-19920600)
chr7 (173-210)||(21295151-21295188)
chr7 (173-210)||(26255096-26255133)
chr7 (173-210)||(28060717-28060754)
chr7 (173-210)||(32872375-32872412)
chr7 (173-210)||(39197718-39197755)
chr7 (173-210)||(41026096-41026133)
chr7 (173-210)||(41252361-41252398)
chr7 (173-210)||(48521029-48521066)
chr7 (170-210)||(2290016-2290056)
chr7 (170-210)||(34979077-34979117)
chr7 (173-209)||(40300230-40300266)
[»] chr4 (29 HSPs)
chr4 (172-210)||(6807428-6807466)
chr4 (172-210)||(36391853-36391891)
chr4 (173-235)||(5743634-5743696)
chr4 (171-210)||(4035823-4035862)
chr4 (171-210)||(37352542-37352581)
chr4 (171-210)||(37357441-37357480)
chr4 (172-235)||(2615920-2615983)
chr4 (172-235)||(28501361-28501424)
chr4 (173-211)||(33413518-33413556)
chr4 (172-210)||(45742806-45742844)
chr4 (172-209)||(375423-375460)
chr4 (173-210)||(5375557-5375594)
chr4 (170-207)||(5733903-5733940)
chr4 (173-210)||(9328240-9328277)
chr4 (173-210)||(26866863-26866900)
chr4 (173-235)||(29520139-29520201)
chr4 (173-210)||(30771528-30771565)
chr4 (173-210)||(32032993-32033030)
chr4 (173-210)||(34273219-34273256)
chr4 (173-235)||(35675895-35675957)
chr4 (173-210)||(44294789-44294826)
chr4 (173-210)||(47806860-47806897)
chr4 (172-234)||(52870643-52870705)
chr4 (173-210)||(52977982-52978019)
chr4 (170-235)||(1028515-1028580)
chr4 (170-210)||(4415962-4416002)
chr4 (173-209)||(26626003-26626039)
chr4 (170-210)||(46949989-46950029)
chr4 (170-235)||(51335790-51335855)
[»] scaffold0308 (1 HSPs)
scaffold0308 (173-210)||(14348-14385)
[»] scaffold0012 (1 HSPs)
scaffold0012 (161-210)||(47628-47677)
[»] scaffold0122 (1 HSPs)
scaffold0122 (170-210)||(12062-12102)
[»] chr6 (12 HSPs)
chr6 (170-210)||(4844397-4844437)
chr6 (173-209)||(13648130-13648166)
chr6 (163-210)||(402621-402668)
chr6 (172-207)||(1147007-1147042)
chr6 (171-210)||(30248645-30248684)
chr6 (173-210)||(231105-231142)
chr6 (173-210)||(8743188-8743225)
chr6 (173-235)||(9038642-9038704)
chr6 (173-210)||(34301832-34301869)
chr6 (169-206)||(34741730-34741767)
chr6 (166-210)||(5576377-5576421)
chr6 (171-211)||(23604458-23604498)
[»] scaffold0029 (1 HSPs)
scaffold0029 (171-210)||(51682-51721)
[»] scaffold0008 (1 HSPs)
scaffold0008 (172-210)||(259122-259160)
[»] scaffold0604 (1 HSPs)
scaffold0604 (173-210)||(3782-3819)
[»] scaffold0002 (1 HSPs)
scaffold0002 (170-207)||(355334-355371)


Alignment Details
Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 2801949 - 2802033
Alignment:
Q  37 tcataagtttcatttgcttcattcgtgtttataatgtataagaaatttcattttagtttctt--aaaaataattgtatatttgtt 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||    
T  2801949 tcataagtttcatttgcttcattcgtgtttataatgtataagaaatttcattttagtttcttaaaaaaaaaattgtatatttgtt 2802033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 2802054 - 2802122
Alignment:
Q  106 attgtatatttgttattgtataatgttaaatttaattgctgttatttaacgaaatataattaagttata 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2802054 attgtatatttgttattgtataatgttaaatttaattgctgttatttaacgaaatataattatgttata 2802122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 2801887 - 2801923
Alignment:
Q  1 tggcttgttgtttagttagcattctgagctcatacat 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  2801887 tggcttgttgtttagttagcattctgagctcatacat 2801923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 235
Target Start/End: Original strand, 30290265 - 30290327
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    ||||||||| |||| ||||||||||||||||||||||||       |||||||||||||||||    
T  30290265 tactccctccgtccctaattataagacccttttgagaaatttttttgtccctttttataagac 30290327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 39750418 - 39750381
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||||||| |||||||||||||||||||||||    
T  39750418 tactccctctgtccctaattataagacccttttgagaa 39750381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 52431214 - 52431174
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  52431214 ttatactccctccgtccctaattataagacccttttgagaa 52431174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 4102753 - 4102714
Alignment:
Q  171 tatactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  4102753 tatactccctccgtccctaattataagacccttttgagaa 4102714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 11741396 - 11741434
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  11741396 atactccctccgtccctaattataagacccttttgagaa 11741434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 36695152 - 36695118
Alignment:
Q  173 tactccctctgtccttaattataagacccttttga 207  Q
    |||||||||||||| ||||||||||||||||||||    
T  36695152 tactccctctgtccctaattataagacccttttga 36695118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 36711253 - 36711219
Alignment:
Q  173 tactccctctgtccttaattataagacccttttga 207  Q
    |||||||||||||| ||||||||||||||||||||    
T  36711253 tactccctctgtccctaattataagacccttttga 36711219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 37951987 - 37951949
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  37951987 atactccctccgtccctaattataagacccttttgagaa 37951949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 39497432 - 39497470
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  39497432 atactccctccgtccctaattataagacccttttgagaa 39497470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 45039411 - 45039449
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  45039411 atactccctccgtccctaattataagacccttttgagaa 45039449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 50007974 - 50008012
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  50007974 atactccctctgtccctaattataagactcttttgagaa 50008012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 943674 - 943637
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  943674 tactccctccgtccctaattataagacccttttgagaa 943637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 1039418 - 1039381
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  1039418 tactccctccgtccctaattataagacccttttgagaa 1039381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 1046324 - 1046287
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  1046324 tactccctccgtccctaattataagacccttttgagaa 1046287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 15811269 - 15811232
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  15811269 tactccctccgtccctaattataagacccttttgagaa 15811232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 235
Target Start/End: Original strand, 16456636 - 16456698
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    ||||||||| |||| |||||||||||||||| |||||||       |||||||||||||||||    
T  16456636 tactccctccgtccctaattataagacccttctgagaaatttttctgtccctttttataagac 16456698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 23541979 - 23542016
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  23541979 tactccctccgtccctaattataagacccttttgagaa 23542016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 36694854 - 36694891
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  36694854 tactccctccgtccctaattataagacccttttgagaa 36694891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 36710955 - 36710992
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  36710955 tactccctccgtccctaattataagacccttttgagaa 36710992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 38261340 - 38261377
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  38261340 tactacctccgtccttaattataagacccttttgagaa 38261377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 39363231 - 39363194
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  39363231 tactccctccgtccctaattataagacccttttgagaa 39363194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 44649629 - 44649666
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  44649629 tactccctccgtccctaattataagacccttttgagaa 44649666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 46075904 - 46075867
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  46075904 tactccctccgtccctaattataagacccttttgagaa 46075867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 49907021 - 49907058
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  49907021 tactccctccgtccctaattataagacccttttgagaa 49907058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 9413365 - 9413300
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    ||||||| |||| |||| |||||||||||||||||||| |||       |||||||||||||||||    
T  9413365 ttatactacctccgtccctaattataagacccttttgaaaaaaaaaattgtccctttttataagac 9413300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 25509206 - 25509246
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||| |||| |||| |||||||||||||||||||||||    
T  25509206 ttatactacctccgtccctaattataagacccttttgagaa 25509246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 30289898 - 30289862
Alignment:
Q  174 actccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||| |||| |||||||||||||||||||||||    
T  30289898 actccctccgtccctaattataagacccttttgagaa 30289862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 39362931 - 39362967
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttg 206  Q
    |||||||||||| |||| |||||||||||||||||||    
T  39362931 ttatactccctccgtccctaattataagacccttttg 39362967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 39750118 - 39750154
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttg 206  Q
    |||||||||||| |||| |||||||||||||||||||    
T  39750118 ttatactccctccgtccctaattataagacccttttg 39750154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000001; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 46878476 - 46878414
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    ||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||    
T  46878476 tactccctccgtccttaattataagacccttttgagaaatttttttgtccctttttataagac 46878414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 206
Target Start/End: Original strand, 26306352 - 26306387
Alignment:
Q  171 tatactccctctgtccttaattataagacccttttg 206  Q
    ||||||||||||||||||||||||||||||||||||    
T  26306352 tatactccctctgtccttaattataagacccttttg 26306387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 43701176 - 43701215
Alignment:
Q  171 tatactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  43701176 tatactccctctgtccctaattataagacccttttgagaa 43701215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 7181349 - 7181412
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    |||||||||| |||| ||||||||||||||||||||||||       |||||||||||||||||    
T  7181349 atactccctccgtccctaattataagacccttttgagaaatttttttgtccctttttataagac 7181412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 235
Target Start/End: Original strand, 14428610 - 14428672
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    ||||||||| |||| ||||||||||||||||||||||||       |||||||||||||||||    
T  14428610 tactccctccgtccctaattataagacccttttgagaaatttttttgtccctttttataagac 14428672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 206
Target Start/End: Complemental strand, 37729010 - 37728977
Alignment:
Q  173 tactccctctgtccttaattataagacccttttg 206  Q
    ||||||||||||||||||||||||||||||||||    
T  37729010 tactccctctgtccttaattataagacccttttg 37728977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 45049059 - 45048997
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    |||||||||||||||||||||||||||| |||||| |||       |||||||||||||||||    
T  45049059 tactccctctgtccttaattataagacctttttgaaaaaaaattttgtccctttttataagac 45048997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 37728706 - 37728750
Alignment:
Q  166 taagttatactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||| |||||||||| |||| |||||||||||||||||||||||    
T  37728706 taagtaatactccctccgtccctaattataagacccttttgagaa 37728750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 32467423 - 32467462
Alignment:
Q  171 tatactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||| ||| ||||||||||||||||||||||||||||    
T  32467423 tatactctctccgtccttaattataagacccttttgagaa 32467462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 43868101 - 43868140
Alignment:
Q  171 tatactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  43868101 tatactccctccgtccctaattataagacccttttgagaa 43868140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 53687028 - 53686972
Alignment:
Q  179 ctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    |||||||| ||||||||||||||||||||||||       |||||||||||||||||    
T  53687028 ctctgtccataattataagacccttttgagaaatttttttgtccctttttataagac 53686972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 12050430 - 12050392
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  12050430 atactccctccgtccctaattataagacccttttgagaa 12050392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 22103967 - 22103929
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  22103967 atactccctccgtccctaattataagacccttttgagaa 22103929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 25149160 - 25149122
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  25149160 atactccctccgtccctaattataagacccttttgagaa 25149122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 27687985 - 27688048
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    ||||| |||| ||||||||||||||||||||||||| |||       |||||||||||||||||    
T  27687985 atactacctccgtccttaattataagacccttttgacaaatttttttgtccctttttataagac 27688048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 29454825 - 29454787
Alignment:
Q  171 tatactccctctgtccttaattataagacccttttgaga 209  Q
    |||||| |||| |||||||||||||||||||||||||||    
T  29454825 tatactacctccgtccttaattataagacccttttgaga 29454787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 35868121 - 35868083
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  35868121 atactccctccgtccctaattataagacccttttgagaa 35868083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Complemental strand, 36099262 - 36099228
Alignment:
Q  172 atactccctctgtccttaattataagacccttttg 206  Q
    ||||||||||||||| |||||||||||||||||||    
T  36099262 atactccctctgtccctaattataagacccttttg 36099228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 44543781 - 44543819
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  44543781 atactccctccgtccctaattataagacccttttgagaa 44543819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 46050023 - 46049985
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaaa 211  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  46050023 tactccctccgtccctaattataagacccttttgagaaa 46049985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 48909871 - 48909934
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    ||||| |||| |||| ||||||||||||||||||||||||       |||||||||||||||||    
T  48909871 atactacctcagtccctaattataagacccttttgagaaatttttttgtccctttttataagac 48909934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 51284100 - 51284062
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  51284100 atactccctccgtccctaattataagacccttttgagaa 51284062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 53271592 - 53271630
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||| |||||||||||||||||||||| |||||||||    
T  53271592 atactctctctgtccttaattataagacctttttgagaa 53271630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 54604625 - 54604591
Alignment:
Q  173 tactccctctgtccttaattataagacccttttga 207  Q
    ||||||||| |||||||||||||||||||||||||    
T  54604625 tactccctccgtccttaattataagacccttttga 54604591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 6784463 - 6784500
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  6784463 tactacctccgtccttaattataagacccttttgagaa 6784500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 9499534 - 9499497
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  9499534 tactccctccgtccctaattataagacccttttgagaa 9499497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 10220933 - 10220970
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  10220933 tactccctccgtccctaattataagacccttttgagaa 10220970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 18657721 - 18657684
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttga 207  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  18657721 ttatactacctctgtccttaattataggacccttttga 18657684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 21756486 - 21756523
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  21756486 tactccctccgtccctaattataagacccttttgagaa 21756523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 26593802 - 26593765
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  26593802 tactccctccgtccctaattataagacccttttgagaa 26593765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 35165999 - 35165962
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  35165999 tactcccttcgtccttaattataagacccttttgagaa 35165962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 45252773 - 45252810
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  45252773 tactccctccgtccctaattataagacccttttgagaa 45252810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 50647981 - 50647919
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    ||||||||| |||  ||||||||||||||||||||||||       |||||||||||||||||    
T  50647981 tactccctccgtctctaattataagacccttttgagaaaaaattttgtccctttttataagac 50647919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 206
Target Start/End: Original strand, 51283802 - 51283835
Alignment:
Q  173 tactccctctgtccttaattataagacccttttg 206  Q
    |||||||||||||| |||||||||||||||||||    
T  51283802 tactccctctgtccctaattataagacccttttg 51283835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 4024052 - 4024088
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgaga 209  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  4024052 tactccctccgtccctaattataagacccttttgaga 4024088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 8546909 - 8546941
Alignment:
Q  178 cctctgtccttaattataagacccttttgagaa 210  Q
    |||| ||||||||||||||||||||||||||||    
T  8546909 cctccgtccttaattataagacccttttgagaa 8546941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 20862193 - 20862233
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| || |||| |||||||||||||||||||||||    
T  20862193 ttatactccatccgtccctaattataagacccttttgagaa 20862233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 211
Target Start/End: Complemental strand, 22527648 - 22527620
Alignment:
Q  183 gtccttaattataagacccttttgagaaa 211  Q
    |||||||||||||||||||||||||||||    
T  22527648 gtccttaattataagacccttttgagaaa 22527620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000001; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 235
Target Start/End: Original strand, 23788969 - 23789031
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    ||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||    
T  23788969 tactccctccgtccttaattataagacccttttgagaaatttttttgtccctttttataagac 23789031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 8841696 - 8841657
Alignment:
Q  171 tatactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  8841696 tatactccctccgtccttaattataagacccttttgagaa 8841657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 40607701 - 40607764
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    |||||||||| |||| ||||||||||||||||||||||||       |||||||||||||||||    
T  40607701 atactccctccgtccctaattataagacccttttgagaaatttttttgtccctttttataagac 40607764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 235
Target Start/End: Original strand, 27560206 - 27560268
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    ||||||||| |||| ||||||||||||||||||||||||       |||||||||||||||||    
T  27560206 tactccctccgtccctaattataagacccttttgagaaaaatttttgtccctttttataagac 27560268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 34062705 - 34062665
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  34062705 ttatactccctccgtccctaattataagacccttttgagaa 34062665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 20252208 - 20252247
Alignment:
Q  171 tatactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  20252208 tatactccctccgtccctaattataagacccttttgagaa 20252247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 41450514 - 41450553
Alignment:
Q  171 tatactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  41450514 tatactccctccgtccctaattataagacccttttgagaa 41450553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 9701069 - 9701132
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    ||||| |||| ||||||||||||||||||||||||| |||       |||||||||||||||||    
T  9701069 atactacctccgtccttaattataagacccttttgaaaaaataatttgtccctttttataagac 9701132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 11201682 - 11201720
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  11201682 atactccctccgtccctaattataagacccttttgagaa 11201720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 18970766 - 18970728
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaaa 211  Q
    |||| ||||||||| ||||||||||||||||||||||||    
T  18970766 tactacctctgtccctaattataagacccttttgagaaa 18970728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 34883886 - 34883848
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  34883886 atactccctccgtccctaattataagacccttttgagaa 34883848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 44573920 - 44573882
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||| |||| ||||||||||||||||||||||||||||    
T  44573920 atactacctccgtccttaattataagacccttttgagaa 44573882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 2438225 - 2438262
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  2438225 tactccctccgtccctaattataagacccttttgagaa 2438262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 7491844 - 7491881
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  7491844 tactccctccgtccctaattataagacccttttgagaa 7491881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 8716929 - 8716892
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  8716929 tactccctccgtccctaattataagacccttttgagaa 8716892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 206
Target Start/End: Complemental strand, 11201980 - 11201947
Alignment:
Q  173 tactccctctgtccttaattataagacccttttg 206  Q
    |||||||||||||| |||||||||||||||||||    
T  11201980 tactccctctgtccctaattataagacccttttg 11201947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 15404744 - 15404707
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  15404744 tactccctccgtccttaattgtaagacccttttgagaa 15404707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 16669626 - 16669663
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| || |||||||||||||||||||||||||    
T  16669626 tactccctccgttcttaattataagacccttttgagaa 16669663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 17408331 - 17408294
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  17408331 tactccctccgtccctaattataagacccttttgagaa 17408294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 36131065 - 36131028
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  36131065 tactccctccgtccctaattataagacccttttgagaa 36131028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 7116336 - 7116275
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataaga 234  Q
    |||| |||| |||| ||||||||||||||||||||||||       ||||||||||||||||    
T  7116336 tactacctccgtccctaattataagacccttttgagaaaaaaaattgtccctttttataaga 7116275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 16108212 - 16108248
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttg 206  Q
    |||||||||||| |||| |||||||||||||||||||    
T  16108212 ttatactccctccgtccctaattataagacccttttg 16108248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 31751066 - 31751131
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    ||||||| |||| |||| ||||||||||||||||||| ||||       |||||||||||||||||    
T  31751066 ttatactacctccgtccctaattataagacccttttgtgaaatttttttgtccctttttataagac 31751131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 34113528 - 34113568
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| || |||| |||||||||||||||||||||||    
T  34113528 ttatactccatccgtccctaattataagacccttttgagaa 34113568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 39833736 - 39833772
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttg 206  Q
    |||||||||||| |||| |||||||||||||||||||    
T  39833736 ttatactccctccgtccctaattataagacccttttg 39833772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000002; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 14913638 - 14913685
Alignment:
Q  163 aattaagttatactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||| |||||||||||| |||| |||||||||||||||||||||||    
T  14913638 aattaaattatactccctccgtccctaattataagacccttttgagaa 14913685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 3028010 - 3028075
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    ||||||| |||| |||| ||||||||||||||||||||||||       |||||||||||||||||    
T  3028010 ttatactacctccgtccctaattataagacccttttgagaaaaaaatttgtccctttttataagac 3028075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 6673268 - 6673228
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  6673268 ttatactccctccgtccctaattataagacccttttgagaa 6673228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 26894913 - 26894873
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  26894913 ttatactccctccgtccctaattataagacccttttgagaa 26894873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 22527690 - 22527729
Alignment:
Q  171 tatactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  22527690 tatactccctccgtccctaattataagacccttttgagaa 22527729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 40004448 - 40004409
Alignment:
Q  171 tatactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  40004448 tatactccctccgtccctaattataagacccttttgagaa 40004409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 16127258 - 16127296
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  16127258 atactccctccgtccctaattataagacccttttgagaa 16127296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 34662202 - 34662240
Alignment:
Q  171 tatactccctctgtccttaattataagacccttttgaga 209  Q
    ||||||||||| |||| ||||||||||||||||||||||    
T  34662202 tatactccctccgtccctaattataagacccttttgaga 34662240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 1265949 - 1265986
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  1265949 tactccctccgtccctaattataagacccttttgagaa 1265986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 3497837 - 3497775
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    ||||||||| || | ||||||||||||||||||||||||       |||||||||||||||||    
T  3497837 tactccctccgttcctaattataagacccttttgagaaatttttttgtccctttttataagac 3497775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 5527974 - 5528011
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  5527974 tactccctccgtccttaattataagacctttttgagaa 5528011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 9828393 - 9828430
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  9828393 tactccctccgtccctaattataagacccttttgagaa 9828430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 235
Target Start/End: Original strand, 21069637 - 21069699
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    |||| ||||||||| |||||||||||||||||||| |||       |||||||||||||||||    
T  21069637 tactacctctgtccctaattataagacccttttgaaaaaataatttgtccctttttataagac 21069699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 23260178 - 23260137
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttgagaaa 211  Q
    ||||||| |||| |||| ||||||||||||||||||||||||    
T  23260178 ttatactacctccgtccctaattataagacccttttgagaaa 23260137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 32478126 - 32478175
Alignment:
Q  161 ataattaagttatactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||| ||||| || ||| |||| |||||||||||||||||||||||    
T  32478126 ataattaaattatattctctccgtccctaattataagacccttttgagaa 32478175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 41384217 - 41384172
Alignment:
Q  165 ttaagttatactccctctgtccttaattataagacccttttgagaa 210  Q
    |||| |||||||||||| |||| ||||||||||| |||||||||||    
T  41384217 ttaaattatactccctccgtccctaattataagatccttttgagaa 41384172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 7951562 - 7951598
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgaga 209  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  7951562 tactccctccgtccctaattataagacccttttgaga 7951598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 16440928 - 16440968
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||||| |||| |||||||||||||||||| ||||    
T  16440928 ttatactccctccgtccctaattataagacccttttaagaa 16440968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 32147291 - 32147331
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||||| |||| ||||||||||||| |||||||||    
T  32147291 ttatactccctccgtccctaattataagacctttttgagaa 32147331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.00000000008; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 32675795 - 32675732
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    |||||||||| |||| ||||||||||||||||||||||||       |||||||||||||||||    
T  32675795 atactccctccgtccctaattataagacccttttgagaaaaaaatttgtccctttttataagac 32675732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 11798605 - 11798642
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||||||| |||||||||||||||||||||||    
T  11798605 tactccctctgtccctaattataagacccttttgagaa 11798642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 18754141 - 18754181
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  18754141 ttatactccctccgtccctaattataagacccttttgagaa 18754181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 26016566 - 26016631
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    |||||||||||| |||| |||||||||||||||||||| |||       |||||||||||||||||    
T  26016566 ttatactccctccgtccctaattataagacccttttgaaaaaaaaatttgtccctttttataagac 26016631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 32475267 - 32475231
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttg 206  Q
    ||||||||||||||||| |||||||||||||||||||    
T  32475267 ttatactccctctgtccctaattataagacccttttg 32475231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 8251971 - 8251933
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  8251971 atactccctccgtccctaattataagacccttttgagaa 8251933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 13153927 - 13153965
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  13153927 atactccctccgtccctaattataagacccttttgagaa 13153965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 28572045 - 28572083
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  28572045 atactccctccgtccctaattataagacccttttgagaa 28572083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 28579638 - 28579676
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  28579638 atactccctccgtccctaattataagacccttttgagaa 28579676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 34568489 - 34568527
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  34568489 atactccctccgtccctaattataagacccttttgagaa 34568527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 39029178 - 39029216
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaaa 211  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  39029178 tactccctccgtccctaattataagacccttttgagaaa 39029216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 51132 - 51095
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  51132 tactccctccgtccctaattataagacccttttgagaa 51095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 1774342 - 1774379
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  1774342 tactccctccgtccctaattataagacccttttgagaa 1774379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 2944309 - 2944272
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  2944309 tactccctccgtccctaattataagacccttttgagaa 2944272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 8951465 - 8951428
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  8951465 tactccctccgtccctaattataagacccttttgagaa 8951428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 12802608 - 12802649
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttgagaaa 211  Q
    ||||||| |||| |||| ||||||||||||||||||||||||    
T  12802608 ttatactacctccgtccctaattataagacccttttgagaaa 12802649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 13568943 - 13568906
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgaga 209  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  13568943 atactacctccgtccttaattataagacccttttgaga 13568906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 206
Target Start/End: Original strand, 17856517 - 17856550
Alignment:
Q  173 tactccctctgtccttaattataagacccttttg 206  Q
    ||||||||| ||||||||||||||||||||||||    
T  17856517 tactccctccgtccttaattataagacccttttg 17856550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 235
Target Start/End: Original strand, 19176136 - 19176198
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    |||| |||| |||||||||||||||||||||||||| ||       |||||||||||||||||    
T  19176136 tactacctccgtccttaattataagacccttttgagtaatttttttgtccctttttataagac 19176198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 28192212 - 28192175
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  28192212 tactccctccgtccctaattataagacccttttgagaa 28192175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 206
Target Start/End: Complemental strand, 40530447 - 40530410
Alignment:
Q  169 gttatactccctctgtccttaattataagacccttttg 206  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  40530447 gttatactccctccgtccctaattataagacccttttg 40530410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 235
Target Start/End: Original strand, 42885054 - 42885116
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    ||||||||| |||| |||||||||||||||||||| |||       |||||||||||||||||    
T  42885054 tactccctccgtccctaattataagacccttttgaaaaaaaaaattgtccctttttataagac 42885116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 207
Target Start/End: Complemental strand, 17856815 - 17856779
Alignment:
Q  171 tatactccctctgtccttaattataagacccttttga 207  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  17856815 tatactccctccgtccctaattataagacccttttga 17856779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 23487061 - 23487126
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    ||||||| |||| |||| |||||||||||||||||||| |||       |||||||||||||||||    
T  23487061 ttatactacctccgtccctaattataagacccttttgaaaaaaaaaattgtccctttttataagac 23487126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 38781181 - 38781141
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||| |||| |||| |||||||||||||||||||||||    
T  38781181 ttatactacctccgtccataattataagacccttttgagaa 38781141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 40529304 - 40529344
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||||| |||| ||||||||||| |||||||||||    
T  40529304 ttatactccctccgtccctaattataagatccttttgagaa 40529344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.00000000008; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 39871651 - 39871588
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    |||||||||| |||| ||||||||||||||||||||||||       |||||||||||||||||    
T  39871651 atactccctccgtccctaattataagacccttttgagaaatttttttgtccctttttataagac 39871588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 41003191 - 41003154
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  41003191 tactccctccgtccttaattataagacccttttgagaa 41003154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 38858295 - 38858335
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  38858295 ttatactccctccgtccctaattataagacccttttgagaa 38858335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 29286076 - 29286037
Alignment:
Q  171 tatactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  29286076 tatactccctccgtccctaattataagacccttttgagaa 29286037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 36698170 - 36698131
Alignment:
Q  171 tatactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  36698170 tatactccctccgtccctaattataagacccttttgagaa 36698131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 20075153 - 20075111
Alignment:
Q  164 attaagttatactccctctgtccttaattataagacccttttg 206  Q
    ||||| |||||||||||| |||| |||||||||||||||||||    
T  20075153 attaacttatactccctccgtccctaattataagacccttttg 20075111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 32814432 - 32814470
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  32814432 atactccctccgtccctaattataagacccttttgagaa 32814470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 33858904 - 33858866
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  33858904 atactccctccgtccctaattataagacccttttgagaa 33858866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 19920563 - 19920600
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  19920563 tactccctccgtccctaattataagacccttttgagaa 19920600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 21295151 - 21295188
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  21295151 tactccctccgtccctaattataagacccttttgagaa 21295188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 26255096 - 26255133
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  26255096 tactccctccgtccctaattataagacccttttgagaa 26255133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 28060717 - 28060754
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||| || ||||||||||||||||||||||||||||    
T  28060717 tactccatccgtccttaattataagacccttttgagaa 28060754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 32872412 - 32872375
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  32872412 tactccctccgtccctaattataagacccttttgagaa 32872375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 39197718 - 39197755
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  39197718 tactccctccgtccctaattataagacccttttgagaa 39197755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 41026133 - 41026096
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  41026133 tactccctccgtccctaattataagacccttttgagaa 41026096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 41252398 - 41252361
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  41252398 tactccctccgtccctaattataagacccttttgagaa 41252361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 48521029 - 48521066
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  48521029 tactccctccgtccctaattataagacccttttgagaa 48521066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 2290056 - 2290016
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||| |||| |||| |||||||||||||||||||||||    
T  2290056 ttatactacctccgtccctaattataagacccttttgagaa 2290016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 34979117 - 34979077
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||||| |||| |||||||||||| ||||||||||    
T  34979117 ttatactccctccgtccctaattataagactcttttgagaa 34979077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 40300230 - 40300266
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgaga 209  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  40300230 tactccctccgtccctaattataagacccttttgaga 40300266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.00000000008; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 6807428 - 6807466
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  6807428 atactccctctgtccctaattataagacccttttgagaa 6807466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 36391853 - 36391891
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  36391853 atactccctccgtccttaattataagacccttttgagaa 36391891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 5743696 - 5743634
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    ||||||||| |||| ||||||||||||||||||||||||       |||||||||||||||||    
T  5743696 tactccctccgtccctaattataagacccttttgagaaaaaaatttgtccctttttataagac 5743634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 4035823 - 4035862
Alignment:
Q  171 tatactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  4035823 tatactccctccgtccctaattataagacccttttgagaa 4035862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 37352542 - 37352581
Alignment:
Q  171 tatactccctctgtccttaattataagacccttttgagaa 210  Q
    |||| |||||| ||||||||||||||||||||||||||||    
T  37352542 tatattccctccgtccttaattataagacccttttgagaa 37352581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 37357441 - 37357480
Alignment:
Q  171 tatactccctctgtccttaattataagacccttttgagaa 210  Q
    |||| |||||| ||||||||||||||||||||||||||||    
T  37357441 tatattccctccgtccttaattataagacccttttgagaa 37357480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 2615983 - 2615920
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    |||||||||| |||| |||| |||||||||||||||||||       |||||||||||||||||    
T  2615983 atactccctccgtccctaatcataagacccttttgagaaatttttttgtccctttttataagac 2615920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 28501424 - 28501361
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    ||||| |||| |||| ||||||||||||||||||||||||       |||||||||||||||||    
T  28501424 atactacctccgtccctaattataagacccttttgagaaatttttttgtccctttttataagac 28501361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 33413518 - 33413556
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaaa 211  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  33413518 tactccctccgtccctaattataagacccttttgagaaa 33413556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 45742844 - 45742806
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  45742844 atactccctccgtccctaattataagacccttttgagaa 45742806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 375423 - 375460
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgaga 209  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  375423 atactacctccgtccttaattataagacccttttgaga 375460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 5375594 - 5375557
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  5375594 tactccctccgtccctaattataagacccttttgagaa 5375557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 5733940 - 5733903
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttga 207  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  5733940 ttatactacctctgtccttaattataggacccttttga 5733903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 9328277 - 9328240
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  9328277 tactccctccgtccctaattataagacccttttgagaa 9328240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 26866900 - 26866863
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  26866900 tactacctccgtccttaattataagacccttttgagaa 26866863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 29520201 - 29520139
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    |||| |||| |||| ||||||||||||||||||||||||       |||||||||||||||||    
T  29520201 tactacctccgtccctaattataagacccttttgagaaaaaaatttgtccctttttataagac 29520139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 30771528 - 30771565
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  30771528 tactccctccgtccctaattataagacccttttgagaa 30771565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 32033030 - 32032993
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  32033030 tactccctccgtccctaattataagacccttttgagaa 32032993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 34273256 - 34273219
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  34273256 tactccctccgtccctaattataagacccttttgagaa 34273219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 35675957 - 35675895
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    ||||||||| |||| |||||||||||||||||||| |||       |||||||||||||||||    
T  35675957 tactccctccgtccctaattataagacccttttgaaaaaaaaatttgtccctttttataagac 35675895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 44294789 - 44294826
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  44294789 tactccctccgtccctaattataagacccttttgagaa 44294826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 47806860 - 47806897
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  47806860 tactccctccgtccctaattataagacccttttgagaa 47806897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 234
Target Start/End: Original strand, 52870643 - 52870705
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataaga 234  Q
    |||||||||| |||  ||||||||||||||||||||||||       ||||||||||||||||    
T  52870643 atactccctccgtctctaattataagacccttttgagaaatttttttgtccctttttataaga 52870705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 52977982 - 52978019
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  52977982 tactccctccgtccctaattataagacccttttgagaa 52978019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 1028515 - 1028580
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    |||||||||||| || | |||||||||||||||||||| |||       |||||||||||||||||    
T  1028515 ttatactccctccgttcctaattataagacccttttgaaaaaaaaaattgtccctttttataagac 1028580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 4415962 - 4416002
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||| |||| |||| |||||||||||||||||||||||    
T  4415962 ttatactacctccgtccctaattataagacccttttgagaa 4416002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 26626039 - 26626003
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgaga 209  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  26626039 tactccctccgtccctaattataagacccttttgaga 26626003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 46949989 - 46950029
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||| |||| |||| |||||||||||||||||||||||    
T  46949989 ttatactacctccgtccctaattataagacccttttgagaa 46950029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 51335790 - 51335855
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    ||||||| ||||  || |||||||||||||||||||||||||       |||||||||||||||||    
T  51335790 ttatactacctccatctttaattataagacccttttgagaaatttttttgtccctttttataagac 51335855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 14385 - 14348
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  14385 tactccctccgtccttaattataagacccttttgagaa 14348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 47628 - 47677
Alignment:
Q  161 ataattaagttatactccctctgtccttaattataagacccttttgagaa 210  Q
    |||| ||| |||||||||||| |||| |||||||||||||||||||||||    
T  47628 ataaataaattatactccctccgtccctaattataagacccttttgagaa 47677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 12062 - 12102
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  12062 ttatactccctccgtccctaattataagacccttttgagaa 12102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000001; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 4844397 - 4844437
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  4844397 ttatactccctccgtccctaattataagacccttttgagaa 4844437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 13648166 - 13648130
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgaga 209  Q
    ||||||||| |||||||||||||||||||||||||||    
T  13648166 tactccctccgtccttaattataagacccttttgaga 13648130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 210
Target Start/End: Complemental strand, 402668 - 402621
Alignment:
Q  163 aattaagttatactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||| |||||||| |||| |||| |||||||||||||||||||||||    
T  402668 aattatgttatactacctccgtccctaattataagacccttttgagaa 402621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 207
Target Start/End: Original strand, 1147007 - 1147042
Alignment:
Q  172 atactccctctgtccttaattataagacccttttga 207  Q
    |||||||||||||||||||||||| |||||||||||    
T  1147007 atactccctctgtccttaattataggacccttttga 1147042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 30248645 - 30248684
Alignment:
Q  171 tatactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  30248645 tatactccctccgtccctaattataagacccttttgagaa 30248684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 231142 - 231105
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  231142 tactccctccgtccctaattataagacccttttgagaa 231105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 8743188 - 8743225
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  8743188 tactccctccgtccctaattataagacccttttgagaa 8743225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 235
Target Start/End: Original strand, 9038642 - 9038704
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaaannnnnnngtccctttttataagac 235  Q
    ||||||||| |||| |||||||||||||||||||| |||       |||||||||||||||||    
T  9038642 tactccctccgtccctaattataagacccttttgaaaaaatcatttgtccctttttataagac 9038704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 34301869 - 34301832
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  34301869 tactccctccgtccctaattataagacccttttgagaa 34301832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 206
Target Start/End: Complemental strand, 34741767 - 34741730
Alignment:
Q  169 gttatactccctctgtccttaattataagacccttttg 206  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  34741767 gttatactccctccgtccctaattataagacccttttg 34741730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 5576421 - 5576377
Alignment:
Q  166 taagttatactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||||| |||| |||||||||||||||||  |||||||||    
T  5576421 taagttatactacctccgtccttaattataagacgtttttgagaa 5576377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 23604458 - 23604498
Alignment:
Q  171 tatactccctctgtccttaattataagacccttttgagaaa 211  Q
    |||||| |||| |||| ||||||||||||||||||||||||    
T  23604458 tatactacctccgtccctaattataagacccttttgagaaa 23604498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 51721 - 51682
Alignment:
Q  171 tatactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  51721 tatactccctccgtccctaattataagacccttttgagaa 51682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 259160 - 259122
Alignment:
Q  172 atactccctctgtccttaattataagacccttttgagaa 210  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  259160 atactccctccgtccctaattataagacccttttgagaa 259122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 3819 - 3782
Alignment:
Q  173 tactccctctgtccttaattataagacccttttgagaa 210  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  3819 tactccctccgtccctaattataagacccttttgagaa 3782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 355371 - 355334
Alignment:
Q  170 ttatactccctctgtccttaattataagacccttttga 207  Q
    |||||||||||| |||| ||||||||||||||||||||    
T  355371 ttatactccctccgtccctaattataagacccttttga 355334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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