View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11864_low_14 (Length: 410)

Name: NF11864_low_14
Description: NF11864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11864_low_14
NF11864_low_14
[»] chr7 (31 HSPs)
chr7 (68-397)||(38041321-38041652)
chr7 (4-67)||(38978607-38978674)
chr7 (3-67)||(29162167-29162236)
chr7 (1-67)||(26041422-26041493)
chr7 (1-67)||(30864305-30864376)
chr7 (1-67)||(33050295-33050366)
chr7 (1-63)||(42431835-42431902)
chr7 (1-67)||(44511251-44511322)
chr7 (4-67)||(116746-116814)
chr7 (1-67)||(27164725-27164796)
chr7 (1-66)||(37325712-37325778)
chr7 (1-46)||(3040510-3040555)
chr7 (5-46)||(19880146-19880187)
chr7 (149-217)||(2767504-2767572)
chr7 (16-67)||(35004131-35004187)
chr7 (1-45)||(48057412-48057456)
chr7 (3-61)||(8742497-8742560)
chr7 (1-67)||(30201371-30201442)
chr7 (1-48)||(44175657-44175704)
chr7 (1-70)||(2346944-2347018)
chr7 (3-63)||(8326239-8326304)
chr7 (1-61)||(10014849-10014914)
chr7 (4-67)||(5901001-5901069)
chr7 (1-45)||(25614736-25614780)
chr7 (4-67)||(32044895-32044963)
chr7 (3-61)||(1838353-1838416)
chr7 (166-217)||(24250542-24250593)
chr7 (1-67)||(39369414-39369485)
chr7 (1-43)||(32315938-32315980)
chr7 (1-61)||(37385127-37385192)
chr7 (2-46)||(47530205-47530249)
[»] chr6 (18 HSPs)
chr6 (286-394)||(31837663-31837773)
chr6 (1-66)||(3339388-3339458)
chr6 (1-67)||(2056895-2056966)
chr6 (1-66)||(17902581-17902651)
chr6 (1-64)||(3660244-3660312)
chr6 (1-61)||(1803981-1804046)
chr6 (1-48)||(11017494-11017541)
chr6 (1-63)||(27334976-27335043)
chr6 (1-63)||(27395716-27395783)
chr6 (1-45)||(6435148-6435192)
chr6 (1-67)||(2881445-2881516)
chr6 (1-43)||(17835724-17835766)
chr6 (1-65)||(2862184-2862253)
chr6 (3-67)||(21210370-21210439)
chr6 (1-45)||(237313-237357)
chr6 (1-45)||(4923058-4923102)
chr6 (5-45)||(12441643-12441683)
chr6 (177-217)||(28867154-28867194)
[»] chr5 (25 HSPs)
chr5 (1-67)||(9596702-9596773)
chr5 (1-67)||(12512905-12512976)
chr5 (1-67)||(3263396-3263467)
chr5 (1-67)||(15622156-15622227)
chr5 (1-64)||(33823585-33823653)
chr5 (1-61)||(17489460-17489525)
chr5 (1-67)||(9594590-9594661)
chr5 (1-67)||(11464011-11464082)
chr5 (1-67)||(22920380-22920451)
chr5 (1-67)||(25345450-25345521)
chr5 (1-44)||(28501729-28501772)
chr5 (1-67)||(30574265-30574336)
chr5 (1-67)||(38010984-38011055)
chr5 (1-46)||(12401304-12401349)
chr5 (5-67)||(4954582-4954649)
chr5 (1-40)||(10522887-10522926)
chr5 (1-64)||(32634820-32634888)
chr5 (1-67)||(7077227-7077298)
chr5 (1-67)||(15917914-15917985)
chr5 (1-67)||(19271971-19272042)
chr5 (140-215)||(43579012-43579087)
chr5 (140-214)||(43590976-43591050)
chr5 (1-61)||(8959272-8959337)
chr5 (3-67)||(36548268-36548337)
chr5 (4-45)||(39788635-39788676)
[»] chr1 (20 HSPs)
chr1 (1-67)||(6829673-6829744)
chr1 (1-67)||(13813670-13813741)
chr1 (1-67)||(25130815-25130886)
chr1 (1-67)||(26501407-26501478)
chr1 (1-48)||(36669282-36669329)
chr1 (1-63)||(9011757-9011824)
chr1 (1-63)||(7203741-7203803)
chr1 (1-46)||(29489273-29489318)
chr1 (1-67)||(27578294-27578365)
chr1 (1-63)||(50777315-50777382)
chr1 (1-43)||(27895678-27895720)
chr1 (6-46)||(49645464-49645504)
chr1 (1-48)||(7371860-7371907)
chr1 (1-67)||(19920874-19920945)
chr1 (1-67)||(25995572-25995645)
chr1 (1-67)||(50035426-50035497)
chr1 (1-42)||(28907669-28907710)
chr1 (1-61)||(42843238-42843303)
chr1 (4-32)||(3100557-3100585)
chr1 (1-64)||(49189102-49189170)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-67)||(147144-147215)
[»] chr8 (28 HSPs)
chr8 (1-67)||(30927819-30927890)
chr8 (4-67)||(19723094-19723162)
chr8 (4-67)||(36593674-36593742)
chr8 (1-67)||(41273627-41273698)
chr8 (1-64)||(41293613-41293680)
chr8 (3-46)||(13884430-13884473)
chr8 (1-42)||(36178181-36178222)
chr8 (1-45)||(2597075-2597119)
chr8 (1-64)||(33817269-33817337)
chr8 (4-67)||(39258943-39259011)
chr8 (1-67)||(1065529-1065600)
chr8 (3-68)||(6656226-6656296)
chr8 (3-68)||(6736628-6736698)
chr8 (1-61)||(37562035-37562100)
chr8 (3-67)||(1332370-1332433)
chr8 (3-46)||(10291158-10291201)
chr8 (1-67)||(20288645-20288716)
chr8 (1-67)||(21075274-21075345)
chr8 (1-67)||(30129521-30129592)
chr8 (3-67)||(6745930-6746000)
chr8 (3-45)||(20284821-20284863)
chr8 (3-45)||(21071450-21071492)
chr8 (176-222)||(24068214-24068260)
chr8 (1-43)||(34970317-34970359)
chr8 (3-67)||(14531735-14531804)
chr8 (1-45)||(5924922-5924966)
chr8 (1-45)||(23952605-23952649)
chr8 (1-45)||(28623040-28623084)
[»] chr4 (31 HSPs)
chr4 (1-67)||(5208215-5208286)
chr4 (1-67)||(27001297-27001368)
chr4 (1-67)||(31221525-31221596)
chr4 (1-67)||(47106023-47106094)
chr4 (1-67)||(51377181-51377252)
chr4 (1-67)||(8026652-8026723)
chr4 (1-66)||(52669498-52669568)
chr4 (4-67)||(44368090-44368158)
chr4 (1-67)||(1796477-1796547)
chr4 (1-67)||(3223101-3223172)
chr4 (1-67)||(24235432-24235503)
chr4 (1-67)||(55267889-55267960)
chr4 (1-61)||(2193703-2193768)
chr4 (1-61)||(20056494-20056559)
chr4 (2-61)||(15638243-15638307)
chr4 (1-45)||(40258313-40258357)
chr4 (4-67)||(53662330-53662398)
chr4 (1-48)||(7037396-7037443)
chr4 (1-67)||(9032892-9032963)
chr4 (1-67)||(53384230-53384300)
chr4 (1-45)||(25936352-25936396)
chr4 (1-45)||(36728537-36728581)
chr4 (2-42)||(51734551-51734590)
chr4 (3-42)||(32079223-32079262)
chr4 (1-63)||(34259938-34260005)
chr4 (1-67)||(37022373-37022444)
chr4 (1-67)||(51224726-51224797)
chr4 (1-61)||(18568709-18568774)
chr4 (1-61)||(32901441-32901506)
chr4 (3-63)||(33483998-33484063)
chr4 (1-45)||(40629272-40629316)
[»] chr3 (28 HSPs)
chr3 (1-67)||(13159773-13159844)
chr3 (1-48)||(30400068-30400115)
chr3 (1-66)||(44855363-44855433)
chr3 (1-64)||(36819068-36819136)
chr3 (1-67)||(11327220-11327291)
chr3 (1-67)||(34021351-34021422)
chr3 (3-65)||(53102792-53102859)
chr3 (4-67)||(3957906-3957974)
chr3 (1-64)||(32931809-32931877)
chr3 (4-67)||(50279975-50280043)
chr3 (1-48)||(3069487-3069534)
chr3 (2-66)||(38944037-38944107)
chr3 (1-67)||(52453980-52454051)
chr3 (3-68)||(40558888-40558958)
chr3 (1-61)||(54233395-54233460)
chr3 (1-68)||(35756092-35756164)
chr3 (1-48)||(23163057-23163104)
chr3 (1-67)||(43900884-43900955)
chr3 (1-67)||(46344526-46344597)
chr3 (1-63)||(50879707-50879774)
chr3 (1-66)||(11574666-11574730)
chr3 (1-61)||(23906881-23906946)
chr3 (1-45)||(2009766-2009810)
chr3 (1-67)||(28263657-28263728)
chr3 (1-66)||(30633703-30633773)
chr3 (128-217)||(48897730-48897819)
chr3 (1-61)||(51717553-51717618)
chr3 (1-64)||(20714355-20714423)
[»] chr2 (22 HSPs)
chr2 (1-67)||(23047971-23048042)
chr2 (1-48)||(34144464-34144511)
chr2 (1-64)||(37966468-37966536)
chr2 (1-67)||(3195975-3196046)
chr2 (1-67)||(38246639-38246710)
chr2 (1-48)||(27307157-27307204)
chr2 (1-67)||(44484544-44484615)
chr2 (1-42)||(36383574-36383615)
chr2 (4-67)||(6885025-6885093)
chr2 (1-67)||(36582368-36582439)
chr2 (1-66)||(20974466-20974526)
chr2 (3-67)||(29893724-29893793)
chr2 (22-67)||(35171151-35171196)
chr2 (1-42)||(38572051-38572092)
chr2 (1-45)||(44018164-44018208)
chr2 (1-44)||(6742326-6742369)
chr2 (3-48)||(23391176-23391221)
chr2 (1-46)||(29871269-29871314)
chr2 (1-45)||(4432439-4432483)
chr2 (4-48)||(10688056-10688100)
chr2 (1-68)||(12358425-12358497)
chr2 (1-45)||(29168837-29168881)
[»] scaffold0004 (1 HSPs)
scaffold0004 (3-67)||(249030-249099)
[»] scaffold0514 (1 HSPs)
scaffold0514 (1-67)||(1384-1455)
[»] scaffold0618 (1 HSPs)
scaffold0618 (1-67)||(3473-3544)
[»] scaffold0172 (1 HSPs)
scaffold0172 (1-70)||(17087-17161)
[»] scaffold0121 (1 HSPs)
scaffold0121 (3-64)||(29897-29963)
[»] scaffold0011 (1 HSPs)
scaffold0011 (4-67)||(18710-18777)
[»] scaffold0443 (1 HSPs)
scaffold0443 (1-45)||(9741-9785)
[»] scaffold0522 (1 HSPs)
scaffold0522 (1-67)||(2392-2463)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-67)||(24785-24856)
[»] scaffold0085 (1 HSPs)
scaffold0085 (1-67)||(31188-31259)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-44)||(204363-204406)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-67)||(88920-88991)
[»] scaffold0122 (1 HSPs)
scaffold0122 (175-217)||(18603-18645)


Alignment Details
Target: chr7 (Bit Score: 305; Significance: 1e-171; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 68 - 397
Target Start/End: Complemental strand, 38041652 - 38041321
Alignment:
Q  68 caagaatatttaacgatggtataatttttacacaacattctttaat--tatatccatcaactcattgattttcagccaataataaatctaagtggttgaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  38041652 caagaatatttaacgatggtataatttttacacaacattctttaatattatatccatcaactcattgattttcagccaataacaaatctaagtggttgaa 38041553  T
Q  166 atctttttgtgatcaattcttgatataatctctttagataattagcaatgcttgttttgtttactctctttatcgattatttccatatccttggattttt 265  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38041552 atcttttcgcgatcaattcttgatataatctctttagataattagcaatgcttgttttgtttactctctttatcgattatttccatatccttggattttt 38041453  T
Q  266 attttctttctaaatatcgcattaatcctccacatacacatttacatgtatttcaacaatacactaagttataatttgtatctttaaaatttggaatttc 365  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38041452 attttctttctaaatatcgcattaatcctccacatacacatttacatgtatttcaacaatacactaagttataatttgtatctttaaaatttggaatttc 38041353  T
Q  366 tgttaaatattccaacagaatctagtccatct 397  Q
    |||||||||||||||||||||| |||||||||    
T  38041352 tgttaaatattccaacagaatcaagtccatct 38041321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 38978607 - 38978674
Alignment:
Q  4 aataagaagagagaaaaacaagattgtcactaaagttgtcat----ggatgtacaaatatcattgctc 67  Q
    |||||||||||||||||||||| |||||||||||||||||||    ||||||||||||||||||||||    
T  38978607 aataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaaggatgtacaaatatcattgctc 38978674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 29162236 - 29162167
Alignment:
Q  3 caataagaagagagaaaaacaagattgtcactaaagttgtcatgg-----atgtacaaatatcattgctc 67  Q
    |||||| ||||||||||||||||||||||||||||||||||||||     ||||||||||||||||||||    
T  29162236 caataaaaagagagaaaaacaagattgtcactaaagttgtcatggaatgaatgtacaaatatcattgctc 29162167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 26041422 - 26041493
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||||  |||||||||||||||||     ||||||||||||||||||||||||    
T  26041422 accaataagaagagagaaaaacaaagttgtcactaaagttgtcataaaatggatgtacaaatatcattgctc 26041493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 30864376 - 30864305
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatcattgctc 67  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||     |||||||||||||||||||||||    
T  30864376 accaataagaaaagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 30864305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 33050295 - 33050366
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||| ||||||| |||||||||||||||||     ||||||||||||||||||||||||    
T  33050295 accaataagaagagagagaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaatatcattgctc 33050366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 42431835 - 42431902
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatgg-----atgtacaaatatcatt 63  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||     ||||||||||||||||    
T  42431835 accaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcatt 42431902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 44511251 - 44511322
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||||||||| |||||||||||| ||||||||||||||||||     ||||||||||||||||||||||||    
T  44511251 accaataagaaaagagaaaaacaaaattgtcactaaagttgtcataaaatggatgtacaaatatcattgctc 44511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 116746 - 116814
Alignment:
Q  4 aataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||| |||| |||||||||||||||||||||||||||||     ||||||||||||||||||||||||    
T  116746 aataaaaagaaagaaaaacaagattgtcactaaagttgtcatgaaatggatgtacaaatatcattgctc 116814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 27164796 - 27164725
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||||  ||||||||||| |||||     ||||||||||||||||||||||||    
T  27164796 accaataagaagagagaaaaacaaagttgtcactaaaattgtcatggaatggatgtacaaatatcattgctc 27164725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 37325778 - 37325712
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatg-gatgtacaaatatcattgct 66  Q
    |||||||| ||||||||||||||| |||||||||||| || |||||  |||||||||||||||||||    
T  37325778 accaataaaaagagagaaaaacaatattgtcactaaaattttcatgaaatgtacaaatatcattgct 37325712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 3040510 - 3040555
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatg 46  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||    
T  3040510 accaataaaaagggagaaaaacaagattgtcactaaagttgtcatg 3040555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 19880187 - 19880146
Alignment:
Q  5 ataagaagagagaaaaacaagattgtcactaaagttgtcatg 46  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  19880187 ataagaagagagaaaaataagattgtcactaaagttgtcatg 19880146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 2767572 - 2767504
Alignment:
Q  149 aaatctaagtggttgaaatctttttgtgatcaattcttgatataatctctttagataattagcaatgct 217  Q
    |||| ||| ||||||||||| || ||||||| |||||||||||||||||| || |||| ||||||||||    
T  2767572 aaatttaattggttgaaatcattctgtgatccattcttgatataatctctctatataaatagcaatgct 2767504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 35004187 - 35004131
Alignment:
Q  16 gaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||||||||     ||||||||||||||||||||||||    
T  35004187 gaaaaacaagattgtcactaaagttgtcataaaatggatgtacaaatatcattgctc 35004131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 48057456 - 48057412
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcat 45  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||    
T  48057456 accaataagaagagagaaaaacaaaattgtcactaaagatgtcat 48057412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 8742497 - 8742560
Alignment:
Q  3 caataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatca 61  Q
    ||||||||||||||||||||||| ||||||| ||||||||||     |||||||||||||||||    
T  8742497 caataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatca 8742560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 30201371 - 30201442
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatgga-----tgtacaaatatcattgctc 67  Q
    |||||||| |||||||||||| |||||||||| |||||||||||| ||     |||||||||||||||||||    
T  30201371 accaataaaaagagagaaaaataagattgtcattaaagttgtcatagaatgtatgtacaaatatcattgctc 30201442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 44175657 - 44175704
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatgga 48  Q
    ||||||||||||| ||||||| ||||||||||||||||||||| ||||    
T  44175657 accaataagaagaaagaaaaagaagattgtcactaaagttgtcgtgga 44175704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 2347018 - 2346944
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcat-----ggatgtacaaatatcattgctccaa 70  Q
    |||||||| |||| ||||||| ||| |||||||||||||||||||     | |||||||||||||||||||||||    
T  2347018 accaataacaagaaagaaaaataaggttgtcactaaagttgtcataaaatgaatgtacaaatatcattgctccaa 2346944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 8326239 - 8326304
Alignment:
Q  3 caataagaagagagaaaaacaagattgtcactaaagttgt-----catggatgtacaaatatcatt 63  Q
    ||||||||||||||||||| | ||||||||||||||||||      ||||||||||||||||||||    
T  8326239 caataagaagagagaaaaatacgattgtcactaaagttgttatgaaatggatgtacaaatatcatt 8326304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 10014914 - 10014849
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatca 61  Q
    |||||||| ||||||||||||||| |||||||| ||||||||||     |||||||||||||||||    
T  10014914 accaataaaaagagagaaaaacaaaattgtcaccaaagttgtcatcaattggatgtacaaatatca 10014849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 5901001 - 5901069
Alignment:
Q  4 aataagaagagagaaaaacaagattgtcactaaagttgtcatg-----gatgtacaaatatcattgctc 67  Q
    ||||| || ||||||||| |||||| |||||||||||||||||     |||||||||||||||||||||    
T  5901001 aataacaaaagagaaaaataagattatcactaaagttgtcatgaaattgatgtacaaatatcattgctc 5901069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25614780 - 25614736
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcat 45  Q
    ||||||||||||||||||||||||| ||||||| ||| |||||||    
T  25614780 accaataagaagagagaaaaacaaggttgtcaccaaaattgtcat 25614736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 32044895 - 32044963
Alignment:
Q  4 aataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    |||||||||||||| |||||| ||||||||||||||||||     ||||||||  ||||||||||||||    
T  32044895 aataagaagagagataaacaaaattgtcactaaagttgtccttaaatggatgtcaaaatatcattgctc 32044963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 1838416 - 1838353
Alignment:
Q  3 caataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatca 61  Q
    ||||||||||||| ||||||||| ||||||| ||||||||||     |||||||||||||||||    
T  1838416 caataagaagagaaaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatca 1838353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 24250542 - 24250593
Alignment:
Q  166 atctttttgtgatcaattcttgatataatctctttagataattagcaatgct 217  Q
    |||||||  |||||||||||||||| ||||||||||||||  ||||||||||    
T  24250542 atcttttcttgatcaattcttgataaaatctctttagatagatagcaatgct 24250593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 39369414 - 39369485
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||||||||| ||||||||||||  |||||||||||||||||     ||||||||  ||||||||||||||    
T  39369414 accaataagaaaagagaaaaacaaagttgtcactaaagttgtccttaaatggatgtcaaaatatcattgctc 39369485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 32315938 - 32315980
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc 43  Q
    ||||||||||||||||||||||||  ||||||| |||||||||    
T  32315938 accaataagaagagagaaaaacaatgttgtcacaaaagttgtc 32315980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 37385192 - 37385127
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatca 61  Q
    ||||||||||| |||||| |||||| ||||||| ||||||||||     |||||||||||||||||    
T  37385192 accaataagaaaagagaagaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatca 37385127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 47530249 - 47530205
Alignment:
Q  2 ccaataagaagagagaaaaacaagattgtcactaaagttgtcatg 46  Q
    |||||||||||| ||||||||||| || |||| ||||||||||||    
T  47530249 ccaataagaagaaagaaaaacaaggttatcaccaaagttgtcatg 47530205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 286 - 394
Target Start/End: Complemental strand, 31837773 - 31837663
Alignment:
Q  286 attaatcctccacatacacat--ttacatgtatttcaacaatacactaagttataatttgtatctttaaaatttggaatttctgttaaatattccaacag 383  Q
    |||||||||||| ||||| ||  ||||||||||||||| ||||||||| |||||||||||||| | | |||||||| ||||| ||||||||||||| |||    
T  31837773 attaatcctccatatacatatatttacatgtatttcaagaatacactatgttataatttgtatatatgaaatttgggatttcagttaaatattccagcag 31837674  T
Q  384 aatctagtcca 394  Q
    ||  |||||||    
T  31837673 aacttagtcca 31837663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 3339458 - 3339388
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgct 66  Q
    |||||||| ||||||||||||||||||||||||||||||||||     |||||||||||||||||||||||    
T  3339458 accaataaaaagagagaaaaacaagattgtcactaaagttgtcatgaaatggatgtacaaatatcattgct 3339388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 2056895 - 2056966
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatgg-----atgtacaaatatcattgctc 67  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||     ||||||||||||||||||||    
T  2056895 accaataagaagagagagaaacaaggttgtcactaaagttgtcatggaatgaatgtacaaatatcattgctc 2056966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 17902651 - 17902581
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatg-----gatgtacaaatatcattgct 66  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||     ||||||||||||||||||||    
T  17902651 accaataagaagagagaaaaacaatattatcactaaagttgtcatggaatagatgtacaaatatcattgct 17902581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 3660312 - 3660244
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatcattg 64  Q
    |||||||| |||||||||||||||| ||||||||||||||||||     ||||||||||||||||||||    
T  3660312 accaataaaaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattg 3660244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1803981 - 1804046
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatca 61  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||     |||||||||||||||||    
T  1803981 accaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatca 1804046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 11017494 - 11017541
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatgga 48  Q
    ||||||||||||||||| ||||||| |||||||||||||||| |||||    
T  11017494 accaataagaagagagagaaacaaggttgtcactaaagttgttatgga 11017541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 27334976 - 27335043
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcatt 63  Q
    |||||||| |||||||||||||||| |||||| ||||||||||     ||||||||||||||||||||    
T  27334976 accaataaaaagagagaaaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaatatcatt 27335043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 27395716 - 27395783
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcatt 63  Q
    |||||||| |||||||||||||||| |||||| ||||||||||     ||||||||||||||||||||    
T  27395716 accaataaaaagagagaaaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaatatcatt 27395783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 6435148 - 6435192
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcat 45  Q
    ||||||||||||||||||||||||| ||||||| ||| |||||||    
T  6435148 accaataagaagagagaaaaacaaggttgtcaccaaaattgtcat 6435192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 2881445 - 2881516
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||| ||||||  ||||||| |||||||||     |||||||| |||||||||||||||    
T  2881445 accaataagaagagagagaaacaaagttgtcaccaaagttgtcattaaatggatgtccaaatatcattgctc 2881516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 17835724 - 17835766
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc 43  Q
    ||||||||||||||||||||||||  |||||| ||||||||||    
T  17835724 accaataagaagagagaaaaacaaagttgtcattaaagttgtc 17835766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 2862184 - 2862253
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgc 65  Q
    ||||||||||| ||||| |||||| |||||||| |||||||||     |||||||| |||||||||||||    
T  2862184 accaataagaaaagagagaaacaaaattgtcaccaaagttgtcattaaatggatgtccaaatatcattgc 2862253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 21210370 - 21210439
Alignment:
Q  3 caataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||| ||||||   |||||||||     |||||||| ||||||||||||||    
T  21210370 caataagaagagagaaaaacaaggttgtcaactaagttgtcattcactggatgtataaatatcattgctc 21210439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 237357 - 237313
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcat 45  Q
    ||||||||||||||||||||||||   |||||| |||||||||||    
T  237357 accaataagaagagagaaaaacaaagatgtcacaaaagttgtcat 237313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 4923058 - 4923102
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcat 45  Q
    |||||||||||||||||||||||| ||| |||  |||||||||||    
T  4923058 accaataagaagagagaaaaacaaaattatcataaaagttgtcat 4923102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 12441643 - 12441683
Alignment:
Q  5 ataagaagagagaaaaacaagattgtcactaaagttgtcat 45  Q
    |||||||||||||||| |||| ||||||| |||||||||||    
T  12441643 ataagaagagagaaaagcaaggttgtcaccaaagttgtcat 12441683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 28867194 - 28867154
Alignment:
Q  177 atcaattcttgatataatctctttagataattagcaatgct 217  Q
    |||||||||||||| ||||||||||||||| || |||||||    
T  28867194 atcaattcttgataaaatctctttagataaataacaatgct 28867154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 9596773 - 9596702
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatgg-----atgtacaaatatcattgctc 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||     ||||||||||||||||||||    
T  9596773 accaataagaagagagaaaaacaagattgtcactaaagttgtcatggaatgaatgtacaaatatcattgctc 9596702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 12512905 - 12512976
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    |||||||||||||||||||||||||||||||||||||||||||     ||||||||||||||||||||||||    
T  12512905 accaataagaagagagaaaaacaagattgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 12512976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 3263467 - 3263396
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||||| ||||||||||||||||||     |||||||||||||||||||||||    
T  3263467 accaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 3263396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 15622156 - 15622227
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||||| |||||||||||||||||     ||||||||||||||||||||||||    
T  15622156 accaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 15622227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 33823653 - 33823585
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatcattg 64  Q
    ||||||||||||||||||||||||| ||||||||||||||||||     ||||||||||||||||||||    
T  33823653 accaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattg 33823585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 17489460 - 17489525
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatca 61  Q
    ||||||||||||||||||||||||||||||||| ||||||||||     |||||||||||||||||    
T  17489460 accaataagaagagagaaaaacaagattgtcaccaaagttgtcatcaattggatgtacaaatatca 17489525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 9594590 - 9594661
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||| ||| ||| |||||||||||||||||     ||||||||||||||||||||||||    
T  9594590 accaataagaagagagagaaataaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 9594661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 11464082 - 11464011
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgt-----catggatgtacaaatatcattgctc 67  Q
    |||||||| |||||||||||||||| ||||||||||||||||      ||||||||||||||||||||||||    
T  11464082 accaataaaaagagagaaaaacaaggttgtcactaaagttgttatggaatggatgtacaaatatcattgctc 11464011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 22920451 - 22920380
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatg-----gatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||     |||||||||||||||| ||||    
T  22920451 accaataagaagagagaaaaacaaggttgtcactatagttgtcatgtaatagatgtacaaatatcatcgctc 22920380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 25345450 - 25345521
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgt-----catggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||| ||||||||||||||| ||||      ||||||||||||||||||||||||    
T  25345450 accaataagaagagagaaaaataagattgtcactaaaattgttatggaatggatgtacaaatatcattgctc 25345521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28501729 - 28501772
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca 44  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  28501729 accaataagaagagagaaaaacaaggttgtcactaaagttgtca 28501772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 30574336 - 30574265
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||||  ||||||||||| |||||     ||||||||||||||||||||||||    
T  30574336 accaataagaagagagaaaaacaaagttgtcactaaaattgtcatggaatggatgtacaaatatcattgctc 30574265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 38010984 - 38011055
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatg-----gatgtacaaatatcattgctc 67  Q
    ||||||||||||||| |||||||| |||||||||||| ||||||||     |||||||||||||||||||||    
T  38010984 accaataagaagagaaaaaaacaaaattgtcactaaaattgtcatggaatagatgtacaaatatcattgctc 38011055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 12401304 - 12401349
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatg 46  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||    
T  12401304 accaataagaagagagaaaaataaggttgtcactaaagttgtcatg 12401349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 4954582 - 4954649
Alignment:
Q  5 ataagaagagagaaaaacaagattgtcactaaagttgt-----catggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||| ||||||||||||||||      ||||||||| ||||||||||||||    
T  4954582 ataagaagagagaaaaacaaggttgtcactaaagttgttatagaatggatgtagaaatatcattgctc 4954649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 10522887 - 10522926
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagtt 40  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  10522887 accaataagaagagagaaaaacaaggttgtcactaaagtt 10522926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 32634820 - 32634888
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattg 64  Q
    ||||||||||| |||||||||||| ||| |||||||| |||||     |||||||||||||||||||||    
T  32634820 accaataagaaaagagaaaaacaaaattatcactaaaattgtcatggaatggatgtacaaatatcattg 32634888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 7077298 - 7077227
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    |||||| | |||||||||||||||  ||||||| |||||||||     ||||||||||||||||||||||||    
T  7077298 accaatcaaaagagagaaaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatcattgctc 7077227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 15917985 - 15917914
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||| ||| ||  ||||| ||||||||||||     |||||||||||||||||||||||    
T  15917985 accaataagaagagagagaaataaagttgtcgctaaagttgtcatggaatggatgtacaaatatcattgctc 15917914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 19271971 - 19272042
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||||  || |||||||| |||||     || |||||||||||||||||||||    
T  19271971 accaataagaagagagaaaaacaaagttatcactaaaattgtcatataatagatgtacaaatatcattgctc 19272042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 215
Target Start/End: Original strand, 43579012 - 43579087
Alignment:
Q  140 gccaataataaatctaagtggttgaaatctttttgtgatcaattcttgatataatctctttagataattagcaatg 215  Q
    |||||||| |||  ||| ||| || |||||||| ||||||||||||||||||||| ||  ||||||| ||||||||    
T  43579012 gccaataagaaaattaattggctggaatcttttcgtgatcaattcttgatataatatcgctagataaatagcaatg 43579087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 43591050 - 43590976
Alignment:
Q  140 gccaataataaatctaagtggttgaaatctttttgtgatcaattcttgatataatctctttagataattagcaat 214  Q
    |||||||| ||| |||| ||| || |||||||| ||||||||||||| ||||||||||   |||||| |||||||    
T  43591050 gccaataagaaaactaattggctggaatcttttcgtgatcaattcttaatataatctcgcaagataaatagcaat 43590976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8959272 - 8959337
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatca 61  Q
    |||||||| |||||||||||||||| ||||| | ||||||||||     |||||||||||||||||    
T  8959272 accaataaaaagagagaaaaacaaggttgtcgccaaagttgtcatcaattggatgtacaaatatca 8959337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 36548337 - 36548268
Alignment:
Q  3 caataagaagagagaaaaacaagattgtcactaaagttgtcat-----ggatgtacaaatatcattgctc 67  Q
    |||||| || ||||||||||||| ||||||  |||||||||||     ||||||||||||||||||||||    
T  36548337 caataaaaatagagaaaaacaaggttgtcatcaaagttgtcattagatggatgtacaaatatcattgctc 36548268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 39788676 - 39788635
Alignment:
Q  4 aataagaagagagaaaaacaagattgtcactaaagttgtcat 45  Q
    ||||||||||||||||| |||||||||||| |||||| ||||    
T  39788676 aataagaagagagaaaagcaagattgtcaccaaagttatcat 39788635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 6829744 - 6829673
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||||||||||||    
T  6829744 accaataagaagagagaaaaacaagattgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 6829673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 13813670 - 13813741
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgt-----catggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||||| ||||||||||||||||      ||||||||||||||||||||||||    
T  13813670 accaataagaagagagaaaaacaaggttgtcactaaagttgttatggaatggatgtacaaatatcattgctc 13813741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 25130815 - 25130886
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatg-----gatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||     ||||||||||||||| |||||    
T  25130815 accaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaatagatgtacaaatatcactgctc 25130886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 26501407 - 26501478
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatg-----gatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||     |||||||||||||||||||||    
T  26501407 accaataagaagagagaaaaacaaggttgtcattaaagttgtcatgtaatagatgtacaaatatcattgctc 26501478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 36669329 - 36669282
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatgga 48  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  36669329 accaataagaagagagaaaaacaaggttgtcactaaagttgtcatgga 36669282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 9011757 - 9011824
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcatt 63  Q
    ||||||||||||||||||||||||||||||||||||  |||||     ||||||||||||||||||||    
T  9011757 accaataagaagagagaaaaacaagattgtcactaacattgtcatgaaatggatgtacaaatatcatt 9011824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 7203803 - 7203741
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatggatgtacaaatatcatt 63  Q
    |||||||  |||||||||||||||| ||||||| ||||| ||| |||||||||||||||||||    
T  7203803 accaatagaaagagagaaaaacaaggttgtcaccaaagtggtcttggatgtacaaatatcatt 7203741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 29489318 - 29489273
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatg 46  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  29489318 accaataagaagaaagaaaaacaaggttgtcactaaagttgtcatg 29489273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 27578294 - 27578365
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatgg-----atgtacaaatatcattgctc 67  Q
    ||||||||||| ||||||||||||| |||| |||||| |||||||||     ||||||||||||||||||||    
T  27578294 accaataagaatagagaaaaacaaggttgttactaaaattgtcatggaatgaatgtacaaatatcattgctc 27578365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 50777382 - 50777315
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatcatt 63  Q
    ||||||||||||||||||||||||| ||||||| ||| ||||||     |||||||||||||||||||    
T  50777382 accaataagaagagagaaaaacaaggttgtcaccaaaattgtcatcaattggatgtacaaatatcatt 50777315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27895720 - 27895678
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc 43  Q
    ||||||||||||||||||||||||  |||||||||||||||||    
T  27895720 accaataagaagagagaaaaacaaagttgtcactaaagttgtc 27895678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 49645464 - 49645504
Alignment:
Q  6 taagaagagagaaaaacaagattgtcactaaagttgtcatg 46  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  49645464 taagaagagagaaaaacaaaattgacactaaagttgtcatg 49645504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 7371907 - 7371860
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatgga 48  Q
    ||||||||||||||||||||||||  || ||| |||||||||||||||    
T  7371907 accaataagaagagagaaaaacaaagttatcagtaaagttgtcatgga 7371860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 19920874 - 19920945
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||||  ||||||| |||||||||     ||||||||  ||||||||||||||    
T  19920874 accaataagaagagagaaaaacaaagttgtcaccaaagttgtccttaaatggatgtcaaaatatcattgctc 19920945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 25995572 - 25995645
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatg-------gatgtacaaatatcattgctc 67  Q
    |||||||| |||||||||||| ||| |||||| |||||||||||||       |||||||||||||||||||||    
T  25995572 accaataaaaagagagaaaaataaggttgtcattaaagttgtcatgaaatatagatgtacaaatatcattgctc 25995645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 50035497 - 50035426
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatg-----gatgtacaaatatcattgctc 67  Q
    |||||||| || ||||||||| ||  ||||||||||||||||||||     |||||||||||||||||||||    
T  50035497 accaataacaaaagagaaaaataaagttgtcactaaagttgtcatgaaatagatgtacaaatatcattgctc 50035426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 28907669 - 28907710
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgt 42  Q
    ||||||||||||||||||||| |||||| |||| ||||||||    
T  28907669 accaataagaagagagaaaaagaagattatcacaaaagttgt 28907710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 42843303 - 42843238
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatca 61  Q
    ||||||||||||||||||||||||| ||||||| ||| || |||     |||||||||||||||||    
T  42843303 accaataagaagagagaaaaacaaggttgtcaccaaaattatcatcaattggatgtacaaatatca 42843238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 32
Target Start/End: Original strand, 3100557 - 3100585
Alignment:
Q  4 aataagaagagagaaaaacaagattgtca 32  Q
    |||||||||||||||||||||||||||||    
T  3100557 aataagaagagagaaaaacaagattgtca 3100585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 49189170 - 49189102
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattg 64  Q
    |||||| | ||||||| ||||||| |||||||| |||||||||     |||||||||||||||||||||    
T  49189170 accaatcaaaagagaggaaaacaaaattgtcaccaaagttgtcattaaatggatgtacaaatatcattg 49189102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 147215 - 147144
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||||| ||||||||||||||||||     |||||||||||||||||||||||    
T  147215 accaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 147144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 3e-18; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 30927890 - 30927819
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||||| |||||||||||||||||     ||||||||||||||||||||||||    
T  30927890 accaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaatatcattgctc 30927819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 19723162 - 19723094
Alignment:
Q  4 aataagaagagagaaaaacaagattgtcactaaagttgtcatg-----gatgtacaaatatcattgctc 67  Q
    |||||||||||||||||||||| ||||||||||||||||||||     |||||||||||||||||||||    
T  19723162 aataagaagagagaaaaacaaggttgtcactaaagttgtcatgatatagatgtacaaatatcattgctc 19723094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 36593742 - 36593674
Alignment:
Q  4 aataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatcattgctc 67  Q
    |||||||||||||||||||||| ||||||||||||||||||     |||||||||||||||||||||||    
T  36593742 aataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 36593674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 41273627 - 41273698
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||||| |||| ||||||||||||     ||||||||||||||||||||||||    
T  41273627 accaataagaagagagaaaaacaaggttgttactaaagttgtcatggaatggatgtacaaatatcattgctc 41273698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 41293680 - 41293613
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattg 64  Q
    ||||||||||||||||||||||||| |||||||||||||||||     |||||||||||||||||||||    
T  41293680 accaataagaagagagaaaaacaag-ttgtcactaaagttgtcatggaatggatgtacaaatatcattg 41293613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 13884430 - 13884473
Alignment:
Q  3 caataagaagagagaaaaacaagattgtcactaaagttgtcatg 46  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  13884430 caataagaagagagaaaaacaaaattgtcactaaagttgtcatg 13884473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 36178222 - 36178181
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgt 42  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  36178222 accaataagaagagagaaaaacaagattatcactaaagttgt 36178181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2597119 - 2597075
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcat 45  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||    
T  2597119 accaataagaagagagaaaaacaaggttgtcaccaaagttgtcat 2597075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 33817269 - 33817337
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatg-----gatgtacaaatatcattg 64  Q
    |||||||| |||||||||||||||||||||||||||| |||| |||     ||||||||||||||||||    
T  33817269 accaataaaaagagagaaaaacaagattgtcactaaaattgttatgaaatagatgtacaaatatcattg 33817337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 39259011 - 39258943
Alignment:
Q  4 aataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||||| ||| |||| |||||     ||||||||||||||||||||||||    
T  39259011 aataagaagagagaaaaacaagattatcattaaaattgtcatggaatggatgtacaaatatcattgctc 39258943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 1065529 - 1065600
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||| ||||||| ||||||||||| || ||||||||||||||     ||||||||||||||||||||||||    
T  1065529 accaaaaagaagatagaaaaacaaggttatcactaaagttgtcatggaatggatgtacaaatatcattgctc 1065600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 6656296 - 6656226
Alignment:
Q  3 caataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctcc 68  Q
    ||||||||||||||||||||||| ||||||||||| || ||     ||||||||||||||| |||||||||    
T  6656296 caataagaagagagaaaaacaaggttgtcactaaaattatcatggaatggatgtacaaataccattgctcc 6656226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 6736698 - 6736628
Alignment:
Q  3 caataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctcc 68  Q
    ||||||||||||||||||||||| ||||||||||| || ||     ||||||||||||||| |||||||||    
T  6736698 caataagaagagagaaaaacaaggttgtcactaaaattatcatggaatggatgtacaaataccattgctcc 6736628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 37562100 - 37562035
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatca 61  Q
    ||||||||||||||||||||||||| ||||||  ||||||||||     |||||||||||||||||    
T  37562100 accaataagaagagagaaaaacaaggttgtcatcaaagttgtcatcaattggatgtacaaatatca 37562035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 1332433 - 1332370
Alignment:
Q  3 caataagaagagagaaaaacaagattgtcactaaagttgtcatggatgtacaaatatcattgctc 67  Q
    |||||||||||||||||| ||||||| |||| ||| ||||| |  ||||||||||||||||||||    
T  1332433 caataagaagagagaaaatcaagattatcaccaaaattgtc-tcaatgtacaaatatcattgctc 1332370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 10291201 - 10291158
Alignment:
Q  3 caataagaagagagaaaaacaagattgtcactaaagttgtcatg 46  Q
    |||||| ||| |||||||||| ||||||||||||||||||||||    
T  10291201 caataaaaagggagaaaaacatgattgtcactaaagttgtcatg 10291158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 20288645 - 20288716
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagt-----tgtcatggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||| ||||||  |||||||||||||     ||  ||||||||||||||||||||||||    
T  20288645 accaataagaagagagagaaacaacgttgtcactaaagtcgtaatggaatggatgtacaaatatcattgctc 20288716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 21075274 - 21075345
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagt-----tgtcatggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||| ||||||  |||||||||||||     ||  ||||||||||||||||||||||||    
T  21075274 accaataagaagagagagaaacaacgttgtcactaaagtcgtaatggaatggatgtacaaatatcattgctc 21075345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 30129521 - 30129592
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatcattgctc 67  Q
    |||||||||||||||||||| |||  ||||||| ||||||||||     ||||||||||||||||| |||||    
T  30129521 accaataagaagagagaaaagcaaagttgtcaccaaagttgtcatcaattggatgtacaaatatcactgctc 30129592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 6746000 - 6745930
Alignment:
Q  3 caataagaagagagaaaaac-aagattgtcactaaagttgtcatgga-----tgtacaaatatcattgctc 67  Q
    |||||||||||||||||||| ||| ||||||||||| ||||||||||     |||||||||| ||||||||    
T  6746000 caataagaagagagaaaaactaaggttgtcactaaaattgtcatggaatggatgtacaaataccattgctc 6745930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 20284821 - 20284863
Alignment:
Q  3 caataagaagagagaaaaacaagattgtcactaaagttgtcat 45  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||    
T  20284821 caataagaagagagaaaaagaaggttgtcacaaaagttgtcat 20284863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 21071450 - 21071492
Alignment:
Q  3 caataagaagagagaaaaacaagattgtcactaaagttgtcat 45  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||    
T  21071450 caataagaagagagaaaaagaaggttgtcacaaaagttgtcat 21071492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 24068214 - 24068260
Alignment:
Q  176 gatcaattcttgatataatctctttagataattagcaatgcttgttt 222  Q
    ||||||||||||||| ||||||| ||||||| |||||||||| ||||    
T  24068214 gatcaattcttgataaaatctctctagataaatagcaatgctcgttt 24068260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 34970317 - 34970359
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc 43  Q
    ||||||||||||||||||||||||  |||| ||||||||||||    
T  34970317 accaataagaagagagaaaaacaaagttgttactaaagttgtc 34970359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 14531735 - 14531804
Alignment:
Q  3 caataagaagagagaaaaacaagattgtcactaaagttgtcatg-----gatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||| ||| |||||| ||| |||||||||     ||||||||||||| |||||||    
T  14531735 caataagaagagagaaaaataaggttgtcattaatgttgtcatgagatagatgtacaaatattattgctc 14531804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 5924922 - 5924966
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcat 45  Q
    ||||||||||||||||||||| ||| ||||||  |||||||||||    
T  5924922 accaataagaagagagaaaaataaggttgtcatgaaagttgtcat 5924966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 23952605 - 23952649
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcat 45  Q
    |||||||| || |||||||||||| ||| ||||||||||||||||    
T  23952605 accaataaaaaaagagaaaaacaaaattatcactaaagttgtcat 23952649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 28623084 - 28623040
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcat 45  Q
    ||||||||||| |||||||| |||| ||||||| |||||||||||    
T  28623084 accaataagaaaagagaaaagcaaggttgtcaccaaagttgtcat 28623040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 3e-18; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 5208286 - 5208215
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||||| ||||||||||||||||||     |||||||||||||||||||||||    
T  5208286 accaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 5208215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 27001368 - 27001297
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||||| ||||||||||||||||||     |||||||||||||||||||||||    
T  27001368 accaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 27001297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 31221525 - 31221596
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatg-----gatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||     |||||||||||||||||||||    
T  31221525 accaataagaagagagaaaaacaagattgtcactaaaattgtcatggaattgatgtacaaatatcattgctc 31221596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 47106023 - 47106094
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||||| |||||||||||||||||     ||||||||||||||||||||||||    
T  47106023 accaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 47106094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 51377252 - 51377181
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||||| |||||||||||||||||     ||||||||||||||||||||||||    
T  51377252 accaataagaagagagaaaaacaaggttgtcactaaagttgtcaaggaatggatgtacaaatatcattgctc 51377181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 8026723 - 8026652
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||||  ||||||||||||||||||     |||||||||||||||||||||||    
T  8026723 accaataagaagagagaaaaacaaagttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 8026652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 52669568 - 52669498
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgct 66  Q
    |||||||| |||||||||||||||||||||||||||||| |||     |||||||||||||||||||||||    
T  52669568 accaataaaaagagagaaaaacaagattgtcactaaagtggtcataaaatggatgtacaaatatcattgct 52669498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 44368158 - 44368090
Alignment:
Q  4 aataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    |||||||||||||||||| ||| |||||||||||||||||     ||||||||||||||||||||||||    
T  44368158 aataagaagagagaaaaataaggttgtcactaaagttgtcatgaaatggatgtacaaatatcattgctc 44368090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 1796477 - 1796547
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    |||||||||||||||||||||||| | ||||||||||||||||     ||||||||||||||||||||||||    
T  1796477 accaataagaagagagaaaaacaa-agtgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 1796547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 3223101 - 3223172
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||| ||| |||||||||||||| ||     ||||||||||||||||||||||||    
T  3223101 accaataagaagagagaaaaagaaggttgtcactaaagttttcatggaatggatgtacaaatatcattgctc 3223172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 24235432 - 24235503
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||  || ||||||||||||||||||     ||||||||||||||||||||||||    
T  24235432 accaataagaagagagaaaattaaaattgtcactaaagttgtcatgaaatggatgtacaaatatcattgctc 24235503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 55267960 - 55267889
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatgga-----tgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||||| || ||||||||||||| |||||     |||||||||||||||||||    
T  55267960 accaataagaagagagaaaaacaaggttatcactaaagttgttatggaataggtgtacaaatatcattgctc 55267889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2193768 - 2193703
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatca 61  Q
    ||||||||||||||||||||||||||||||||  ||||||||||     |||||||||||||||||    
T  2193768 accaataagaagagagaaaaacaagattgtcatcaaagttgtcatcaattggatgtacaaatatca 2193703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 20056494 - 20056559
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatca 61  Q
    |||||||||||||||||||| |||||||||||| ||||||||||     |||||||||||||||||    
T  20056494 accaataagaagagagaaaagcaagattgtcaccaaagttgtcatcaattggatgtacaaatatca 20056559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 15638243 - 15638307
Alignment:
Q  2 ccaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatca 61  Q
    |||||||||||||||||||||||| ||||||| ||||||||||     |||||||||||||||||    
T  15638243 ccaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatca 15638307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 40258313 - 40258357
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcat 45  Q
    |||||||| |||||||||||||||||||||||| |||||||||||    
T  40258313 accaataaaaagagagaaaaacaagattgtcaccaaagttgtcat 40258357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 53662398 - 53662330
Alignment:
Q  4 aataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||| ||| ||||||||||||||     ||||||||||| ||||||||||||    
T  53662398 aataagaagagagaaaaacaaaattatcactaaagttgtcatgaaatggatgtacatatatcattgctc 53662330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 7037443 - 7037396
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatgga 48  Q
    |||||||||||| |||||||||||| ||||| ||||||||||||||||    
T  7037443 accaataagaagggagaaaaacaaggttgtccctaaagttgtcatgga 7037396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 9032892 - 9032963
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgt-----catggatgtacaaatatcattgctc 67  Q
    |||||||| || ||||||||||||| ||||||||||||||||      ||||||||||||||||||||||||    
T  9032892 accaataaaaaaagagaaaaacaaggttgtcactaaagttgtaatgaaatggatgtacaaatatcattgctc 9032963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 53384300 - 53384230
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    |||||||||||||||||||||||| ||||||||||||||| ||     |||||||||||||||| |||||||    
T  53384300 accaataagaagagagaaaaacaa-attgtcactaaagttatcataaaatggatgtacaaatattattgctc 53384230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 25936352 - 25936396
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcat 45  Q
    ||||||||||| ||||||||||||||||||||| |||||| ||||    
T  25936352 accaataagaaaagagaaaaacaagattgtcacaaaagttatcat 25936396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36728581 - 36728537
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcat 45  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||    
T  36728581 accaataagaagagagaaaaacaaagttgtcaccaaagttgtcat 36728537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 51734590 - 51734551
Alignment:
Q  2 ccaataagaagagagaaaaacaagattgtcactaaagttgt 42  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  51734590 ccaataagaagagagaaaaa-aagattgtcactaaagttgt 51734551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 32079223 - 32079262
Alignment:
Q  3 caataagaagagagaaaaacaagattgtcactaaagttgt 42  Q
    ||||||||| ||||||||||||| ||||||||||||||||    
T  32079223 caataagaaaagagaaaaacaaggttgtcactaaagttgt 32079262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 34259938 - 34260005
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatcatt 63  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||||     ||| |||||||||||||||    
T  34259938 accaataagaagagagaaaaagaagtttgtcacaaaagttgtcaccaaatggttgtacaaatatcatt 34260005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 37022373 - 37022444
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    |||||||| || | |||||||||||||| ||||||||||||||     ||||||||||||||||||| ||||    
T  37022373 accaataaaaaaaaagaaaaacaagattatcactaaagttgtcatgaaatggatgtacaaatatcatcgctc 37022444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 51224797 - 51224726
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    |||||| | ||||||| ||||||| |||||||| |||||||||     ||||||||||||||||||||||||    
T  51224797 accaatcaaaagagaggaaaacaaaattgtcaccaaagttgtcattaaatggatgtacaaatatcattgctc 51224726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18568774 - 18568709
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatca 61  Q
    ||||||||||||| |||||| |||| ||||||| ||||||||||     |||||||||||||||||    
T  18568774 accaataagaagatagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatatca 18568709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 32901441 - 32901506
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatca 61  Q
    |||||||| |||||||||||||||||||||||| ||| || |||     |||||||||||||||||    
T  32901441 accaataaaaagagagaaaaacaagattgtcaccaaaattatcatcaattggatgtacaaatatca 32901506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 33484063 - 33483998
Alignment:
Q  3 caataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatcatt 63  Q
    ||||||||||||||||||  ||| ||||||| ||||||||||     |||||||||||||||||||    
T  33484063 caataagaagagagaaaagtaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcatt 33483998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 40629316 - 40629272
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcat 45  Q
    ||||||||||| |||||||| |||||||||||| |||||| ||||    
T  40629316 accaataagaaaagagaaaagcaagattgtcaccaaagttatcat 40629272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 3e-18; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 13159773 - 13159844
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||||| |||||||||||||||||     ||||||||||||||||||||||||    
T  13159773 accaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 13159844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 30400115 - 30400068
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatgga 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  30400115 accaataagaagagagaaaaacaagattgtcactaaagttgtcatgga 30400068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 44855363 - 44855433
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatg-----gatgtacaaatatcattgct 66  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||     ||||||||||||||||||||    
T  44855363 accaataagaagagagaaaaataagattgtcactaaagttgtcatgaaattgatgtacaaatatcattgct 44855433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 36819068 - 36819136
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattg 64  Q
    ||||||||||||||||||||||||| |||||||||||||||||     |||||||||||||||||||||    
T  36819068 accaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattg 36819136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 11327220 - 11327291
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||| ||||||| |||||||||||||||||     ||||||||||||||||||||||||    
T  11327220 accaataagaagagagagaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaatatcattgctc 11327291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 34021422 - 34021351
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||||  ||||||||||||||||||     |||||||||||||||||||||||    
T  34021422 accaataagaagagagaaaaacaaagttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 34021351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 53102859 - 53102792
Alignment:
Q  3 caataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatcattgc 65  Q
    ||||||||||||||||||||||| ||||||||||||||||||     |||||||||||||||||||||    
T  53102859 caataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgc 53102792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 3957974 - 3957906
Alignment:
Q  4 aataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    |||||||||| ||||||||||| |||||||||||||||||     ||||||||||||||||||||||||    
T  3957974 aataagaagatagaaaaacaaggttgtcactaaagttgtcctggaatggatgtacaaatatcattgctc 3957906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 32931877 - 32931809
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgt-----catggatgtacaaatatcattg 64  Q
    ||||||||||||||||||||||||| ||||||||||||||||      |||||||||||||||||||||    
T  32931877 accaataagaagagagaaaaacaaggttgtcactaaagttgttgtgaaatggatgtacaaatatcattg 32931809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 50280043 - 50279975
Alignment:
Q  4 aataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    |||||||||||||||||||||| |||||| ||||||||||     ||||||||||||||||||||||||    
T  50280043 aataagaagagagaaaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaatatcattgctc 50279975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 3069534 - 3069487
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatgga 48  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||    
T  3069534 accaataagaagagagaaaaacaagattcccactaaagttgtcatgga 3069487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 38944107 - 38944037
Alignment:
Q  2 ccaataagaagagagaaaaacaagattgtcactaaagttgtcatg------gatgtacaaatatcattgct 66  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||      ||||||||||||||||||||    
T  38944107 ccaataagaagggagaaaaataagattgtcactaaagttgtcatggaaatagatgtacaaatatcattgct 38944037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 52454051 - 52453980
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||| ||||||  |||||||||||||||||     ||||||||||||||||||||||||    
T  52454051 accaataagaagagagagaaacaaagttgtcactaaagttgtcatgaaatggatgtacaaatatcattgctc 52453980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 40558958 - 40558888
Alignment:
Q  3 caataagaagagagaaaaacaagattgtcactaaagttgtcatgg-----atgtacaaatatcattgctcc 68  Q
    ||||||||||||||||||| ||| |||||||||||||||| ||||     |||||||||||||||||||||    
T  40558958 caataagaagagagaaaaataaggttgtcactaaagttgttatggaatgaatgtacaaatatcattgctcc 40558888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 54233460 - 54233395
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatca 61  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||     |||||||||||||||||    
T  54233460 accaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatca 54233395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 35756092 - 35756164
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatg-----gatgtacaaatatcattgctcc 68  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||||     ||||||||||||| ||||||||    
T  35756092 accaataagaagagagaaaaacaaagttgtcaccaaagttgtcatgaaatagatgtacaaatatgattgctcc 35756164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 23163104 - 23163057
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatgga 48  Q
    ||||||||||| |||||||||||| |||||||||||| ||||||||||    
T  23163104 accaataagaaaagagaaaaacaaaattgtcactaaaattgtcatgga 23163057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 43900884 - 43900955
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||||  |||||||||||||||||     ||||||||  ||||||||||||||    
T  43900884 accaataagaagagagaaaaacaaagttgtcactaaagttgtccttaaatggatgtcaaaatatcattgctc 43900955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 46344526 - 46344597
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||||||||||| ||||||| ||| |||||||||||||||||     ||| ||||||||||||||||||||    
T  46344526 accaataagaagaaagaaaaataaggttgtcactaaagttgtcgtgaaatgaatgtacaaatatcattgctc 46344597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 50879707 - 50879774
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatgg-----atgtacaaatatcatt 63  Q
    |||||||||||||||||| |||||  |||||||||||||||||||||     ||||||||||||||||    
T  50879707 accaataagaagagagaacaacaaagttgtcactaaagttgtcatggaatggatgtacaaatatcatt 50879774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 11574666 - 11574730
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatggatgtacaaatatcattgct 66  Q
    ||||||||||||||||||||  ||| ||||||| ||||||||  ||||||||||||||||| ||||    
T  11574666 accaataagaagagagaaaattaaggttgtcaccaaagttgt-ttggatgtacaaatatcactgct 11574730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23906946 - 23906881
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatca 61  Q
    |||||||||||||||||||| |||| ||||||| ||||||||||     |||||||||||||||||    
T  23906946 accaataagaagagagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatatca 23906881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 2009766 - 2009810
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcat 45  Q
    |||||||||||||||||||| |||| ||||||| |||||||||||    
T  2009766 accaataagaagagagaaaagcaaggttgtcaccaaagttgtcat 2009810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 28263657 - 28263728
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||||||||||| ||||||| ||  |||||||||||||||||     ||||||| ||||||||||||||||    
T  28263657 accaataagaagaaagaaaaataaagttgtcactaaagttgtcatgaaatggatgaacaaatatcattgctc 28263728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 30633773 - 30633703
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgct 66  Q
    ||||||||||||||||||||| ||| |||||| ||||||| ||     || ||||||||||||||||||||    
T  30633773 accaataagaagagagaaaaataaggttgtcattaaagttatcataaaatagatgtacaaatatcattgct 30633703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 217
Target Start/End: Original strand, 48897730 - 48897819
Alignment:
Q  128 cattgattttcagccaataataaatctaagtggttgaaatctttttgtgatcaattcttgatataatctctttagataattagcaatgct 217  Q
    |||||||||||  | ||||| |||| ||| | | |||||  ||||| |||| ||||||||||| ||||||| ||||||| ||||||||||    
T  48897730 cattgattttcgacaaataacaaatttaacttgctgaaacatttttttgattaattcttgataaaatctctctagataaatagcaatgct 48897819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 51717553 - 51717618
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatca 61  Q
    ||||| |||||||||||||| |||| ||||||| ||||||||||     |||||||||||||||||    
T  51717553 accaacaagaagagagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatatca 51717618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 20714355 - 20714423
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattg 64  Q
    ||||||||||||| ||||||| ||| ||||||||||| || ||     |||||||||||||||||||||    
T  20714355 accaataagaagatagaaaaataaggttgtcactaaaattatcatggaatggatgtacaaatatcattg 20714423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 23048042 - 23047971
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||||| ||||||||||||||||||     |||||||||||||||||||||||    
T  23048042 accaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 23047971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 34144511 - 34144464
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatgga 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34144511 accaataagaagagagaaaaacaagattgtcactaaagttgtcatgga 34144464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 37966468 - 37966536
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattg 64  Q
    ||||||||||||||||||||||||| |||||||||||||||||     |||||||||||||||||||||    
T  37966468 accaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaatatcattg 37966536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 3196046 - 3195975
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||||| |||| |||||||||||||     |||||||||||||||||||||||    
T  3196046 accaataagaagagagaaaaacaaggttgttactaaagttgtcatggaatggatgtacaaatatcattgctc 3195975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 38246710 - 38246639
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatg-----gatgtacaaatatcattgctc 67  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||     |||||||||||||||||||||    
T  38246710 accaataagaagagagagaaacaaggttgtcactaaagttgtcatggaattgatgtacaaatatcattgctc 38246639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 27307204 - 27307157
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatgga 48  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  27307204 accaataagaagagagaaaaataaggttgtcactaaagttgtcatgga 27307157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 44484615 - 44484544
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||||  |||||||||||||||||     || |||||||||||||||||||||    
T  44484615 accaataagaagagagaaaaacaaagttgtcactaaagttgtcataaaattgatgtacaaatatcattgctc 44484544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 36383574 - 36383615
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgt 42  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  36383574 accaataagaagagagaaaaacaaggttgtcactaaagttgt 36383615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 6885025 - 6885093
Alignment:
Q  4 aataagaagagagaaaaacaagattgtcactaaagttgtcatgga-----tgtacaaatatcattgctc 67  Q
    |||||||||||||||||||||  |||||||||||||||||||| |     |||||||||||||||||||    
T  6885025 aataagaagagagaaaaacaaagttgtcactaaagttgtcatgaaatgaatgtacaaatatcattgctc 6885093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 36582368 - 36582439
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    |||||| |||| ||||||||||||| ||||||| |||||||||     ||||||||||||||||||||||||    
T  36582368 accaattagaatagagaaaaacaaggttgtcaccaaagttgtcatcaaatggatgtacaaatatcattgctc 36582439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 20974466 - 20974526
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatggatgtacaaatatcattgct 66  Q
    |||||||||||||||||||||||| ||||||| ||||||     ||||| ||||||||||||||||    
T  20974466 accaataagaagagagaaaaacaaaattgtcattaaagt-----tggatatacaaatatcattgct 20974526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 29893724 - 29893793
Alignment:
Q  3 caataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    |||||||||||||||||||||| |||||||||||| || ||     |||||| |||||||||||||||||    
T  29893724 caataagaagagagaaaaacaaaattgtcactaaacttatcatagaatggatatacaaatatcattgctc 29893793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 35171196 - 35171151
Alignment:
Q  22 caagattgtcactaaagttgtcatggatgtacaaatatcattgctc 67  Q
    |||| |||||||||||||| ||||||||||| ||||||||||||||    
T  35171196 caaggttgtcactaaagttatcatggatgtaaaaatatcattgctc 35171151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 38572051 - 38572092
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgt 42  Q
    ||||||||||||||||||||||||| ||||||| ||||||||    
T  38572051 accaataagaagagagaaaaacaaggttgtcaccaaagttgt 38572092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 44018208 - 44018164
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcat 45  Q
    ||||||||||| |||||||||||||||| ||| ||||||||||||    
T  44018208 accaataagaaaagagaaaaacaagattttcattaaagttgtcat 44018164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6742369 - 6742326
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca 44  Q
    ||||||||||||||||| ||| ||||||||||| ||||||||||    
T  6742369 accaataagaagagagagaaagaagattgtcacaaaagttgtca 6742326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 23391176 - 23391221
Alignment:
Q  3 caataagaagagagaaaaacaagattgtcactaaagttgtcatgga 48  Q
    ||||||||||||||||||||||  ||||| |||||||| |||||||    
T  23391176 caataagaagagagaaaaacaaagttgtcgctaaagttatcatgga 23391221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 29871314 - 29871269
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatg 46  Q
    ||||||||||||||||| ||||||  ||||||| ||||||||||||    
T  29871314 accaataagaagagagagaaacaaagttgtcaccaaagttgtcatg 29871269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 4432439 - 4432483
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcat 45  Q
    ||||||||||||||||||||||||  ||| |||| ||||||||||    
T  4432439 accaataagaagagagaaaaacaaagttgacactgaagttgtcat 4432483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 10688056 - 10688100
Alignment:
Q  4 aataagaagagagaaaaacaagattgtcactaaagttgtcatgga 48  Q
    |||||||||||||||||||||| || ||| |||||||| ||||||    
T  10688056 aataagaagagagaaaaacaaggttttcattaaagttgccatgga 10688100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 12358425 - 12358497
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatcattgctcc 68  Q
    |||||||| |||| |||||| |||| ||||||| ||||||||||     ||||||||||||||||| ||||||    
T  12358425 accaataaaaagatagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcactgctcc 12358497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 29168837 - 29168881
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcat 45  Q
    ||||||||||||||||||||| ||  ||||||| |||||||||||    
T  29168837 accaataagaagagagaaaaataatgttgtcaccaaagttgtcat 29168881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 249099 - 249030
Alignment:
Q  3 caataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||| ||||||||||||||||||     |||||||||||||||||||||||    
T  249099 caataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 249030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 1455 - 1384
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||||||  ||||||||||| |||||     ||||||||||||||||||||||||    
T  1455 accaataagaagagagaaaaacaaagttgtcactaaaattgtcatggaatggatgtacaaatatcattgctc 1384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 3473 - 3544
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||||||||||| ||||||| ||| |||||||||||||||||     ||| ||||||||||||||||||||    
T  3473 accaataagaagaaagaaaaataaggttgtcactaaagttgtcgtgaaatgaatgtacaaatatcattgctc 3544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 17087 - 17161
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcat-----ggatgtacaaatatcattgctccaa 70  Q
    |||||| |||||||||| ||||||  ||||||| |||||||||||     |||||||||||||||||||||||||    
T  17087 accaatcagaagagagagaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatcattgctccaa 17161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 29897 - 29963
Alignment:
Q  3 caataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattg 64  Q
    |||||| |||||||||||||||| |||| ||||||||||||     |||||||||||||||||||||    
T  29897 caataaaaagagagaaaaacaaggttgtaactaaagttgtcattaaatggatgtacaaatatcattg 29963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 18710 - 18777
Alignment:
Q  4 aataagaagagagaaaaacaagattgtcactaaagttgtc----atggatgtacaaatatcattgctc 67  Q
    |||||||| ||||||||| ||| || ||||||||||||||    ||||||||||||||||||||||||    
T  18710 aataagaatagagaaaaataaggttatcactaaagttgtctggaatggatgtacaaatatcattgctc 18777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 9785 - 9741
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcat 45  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  9785 accaataagaaaagagaaaaacaaaattgtcagtaaagttgtcat 9741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 2463 - 2392
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca-----tggatgtacaaatatcattgctc 67  Q
    |||||||| ||||||||||| |||||||||||| ||| || |||     |||||||||||||||||||||||    
T  2463 accaataaaaagagagaaaatcaagattgtcaccaaaattatcatcaattggatgtacaaatatcattgctc 2392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 24785 - 24856
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatg-----gatgtacaaatatcattgctc 67  Q
    ||||||||||||||||||||| ||| ||||||||||| || |||||     |||||||||||||| ||||||    
T  24785 accaataagaagagagaaaaataaggttgtcactaaaattatcatgaaatagatgtacaaatatcgttgctc 24856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 31259 - 31188
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtcatg-----gatgtacaaatatcattgctc 67  Q
    ||||||||||| ||||||||||||  ||||||||||| || |||||     |||||||||||||||||||||    
T  31259 accaataagaacagagaaaaacaaagttgtcactaaaattatcatgtaatagatgtacaaatatcattgctc 31188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 204406 - 204363
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtca 44  Q
    |||||||||||||||||||||  |||||||||| ||||||||||    
T  204406 accaataagaagagagaaaaagtagattgtcacaaaagttgtca 204363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 88920 - 88991
Alignment:
Q  1 accaataagaagagagaaaaacaagattgtcactaaagttgtc-----atggatgtacaaatatcattgctc 67  Q
    ||||||||||| ||| ||||| ||| |||||||||||||| ||     ||||||||||||||||||||||||    
T  88920 accaataagaaaagaaaaaaataaggttgtcactaaagttatcatgagatggatgtacaaatatcattgctc 88991  T

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Target: scaffold0122 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 18645 - 18603
Alignment:
Q  175 tgatcaattcttgatataatctctttagataattagcaatgct 217  Q
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T  18645 tgatcaattcttaataaaatctctttagataaatagcaatgct 18603  T

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