View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11864_low_23 (Length: 254)
Name: NF11864_low_23
Description: NF11864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11864_low_23 |
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Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 16 - 240
Target Start/End: Original strand, 9566482 - 9566706
Alignment:
| Q |
16 |
caacatacaacatggagggttggatatgtcgtttgaaacctagacatatgagctttcctaagaacaactaatcactcaaatccgtgacatgagattaatc |
115 |
Q |
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| T |
9566482 |
caacatacaacatggagggttggatatgtcgtttgaaacctagacatatgagctttcctaagaacaactaatcactcaaatccgtgacatgagattaatc |
9566581 |
T |
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| Q |
116 |
atttcttgtacaaaaagcaatataatactaatgctgaaattcttacatccacttgttggatggagaaagctgctattaggacgaaatttgtgtatgtttt |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |
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| T |
9566582 |
atttcttgtacaaaaagcaatataatactaatgctgaaattcttacatccacttgttggttggagaaagctgttattaggacgaaatttgtgtatgtttt |
9566681 |
T |
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| Q |
216 |
tgtggatcgataaatgttatttgtc |
240 |
Q |
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|||||||||| |||||||||||||| |
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| T |
9566682 |
tgtggatcgacaaatgttatttgtc |
9566706 |
T |
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