View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11865_low_19 (Length: 221)

Name: NF11865_low_19
Description: NF11865
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11865_low_19
NF11865_low_19
[»] chr4 (12 HSPs)
chr4 (1-218)||(3768010-3768227)
chr4 (142-218)||(5787115-5787191)
chr4 (140-218)||(34514117-34514195)
chr4 (140-213)||(37910474-37910547)
chr4 (140-218)||(34940565-34940643)
chr4 (140-218)||(36198626-36198703)
chr4 (140-218)||(45498984-45499062)
chr4 (140-208)||(44289437-44289505)
chr4 (140-204)||(28115543-28115607)
chr4 (173-218)||(34512170-34512215)
chr4 (149-193)||(3320017-3320061)
chr4 (105-141)||(45498901-45498937)
[»] chr6 (7 HSPs)
chr6 (140-218)||(9315081-9315159)
chr6 (140-218)||(391095-391173)
chr6 (140-218)||(12255386-12255464)
chr6 (140-218)||(10789233-10789310)
chr6 (148-218)||(23404760-23404830)
chr6 (140-218)||(32329614-32329691)
chr6 (157-218)||(24660620-24660681)
[»] chr5 (9 HSPs)
chr5 (140-218)||(25346862-25346940)
chr5 (141-218)||(21091074-21091151)
chr5 (139-218)||(33007806-33007885)
chr5 (140-218)||(31078142-31078220)
chr5 (140-218)||(33134360-33134438)
chr5 (140-218)||(29861141-29861219)
chr5 (140-218)||(15921995-15922072)
chr5 (140-218)||(7883601-7883679)
chr5 (140-193)||(39351568-39351621)
[»] chr1 (7 HSPs)
chr1 (140-218)||(37346168-37346246)
chr1 (140-218)||(17702930-17703008)
chr1 (146-218)||(28622728-28622800)
chr1 (141-193)||(52268237-52268289)
chr1 (140-195)||(19910309-19910364)
chr1 (140-207)||(10306618-10306686)
chr1 (144-175)||(30952148-30952179)
[»] chr8 (12 HSPs)
chr8 (140-218)||(16295610-16295688)
chr8 (140-218)||(16303312-16303390)
chr8 (140-218)||(27696504-27696582)
chr8 (140-218)||(40953503-40953581)
chr8 (140-218)||(3174191-3174269)
chr8 (138-218)||(37246434-37246514)
chr8 (140-216)||(42180586-42180662)
chr8 (140-218)||(43597106-43597184)
chr8 (140-218)||(15268900-15268978)
chr8 (140-207)||(11656158-11656225)
chr8 (140-193)||(511936-511989)
chr8 (144-175)||(23586059-23586090)
[»] chr3 (5 HSPs)
chr3 (140-218)||(40700836-40700914)
chr3 (143-218)||(28457596-28457671)
chr3 (140-208)||(54819668-54819737)
chr3 (140-218)||(21748218-21748295)
chr3 (140-193)||(41864800-41864853)
[»] chr2 (9 HSPs)
chr2 (140-218)||(27338985-27339063)
chr2 (138-218)||(40619503-40619583)
chr2 (140-218)||(13349341-13349419)
chr2 (140-207)||(13995549-13995616)
chr2 (140-218)||(19695958-19696036)
chr2 (140-218)||(37485847-37485925)
chr2 (140-218)||(41595515-41595592)
chr2 (138-210)||(15665205-15665277)
chr2 (149-187)||(15262243-15262281)
[»] chr7 (8 HSPs)
chr7 (140-218)||(34703312-34703390)
chr7 (140-218)||(34866253-34866331)
chr7 (140-199)||(18502879-18502938)
chr7 (143-218)||(6110373-6110447)
chr7 (139-203)||(17508576-17508640)
chr7 (139-203)||(17544574-17544638)
chr7 (148-193)||(25103038-25103083)
chr7 (138-178)||(33819421-33819461)


Alignment Details
Target: chr4 (Bit Score: 174; Significance: 9e-94; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 3768227 - 3768010
Alignment:
Q  1 ttttatcttctacacactagttnnnnnnnttaacataaaaaccaaaatacacaggtaagatcaaaattttgatgtccaaaagtcacttctttttaagatt 100  Q
    ||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3768227 ttttatcttctacacactagttataaaaattaacataaaaaccaaaatacacaggtaagatcaaaattttgatgtccaaaagtcacttctttttaagatt 3768128  T
Q  101 aggatccgtttgatggtcatgatagg-ataggggcatgatattaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaa 199  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  3768127 aggatccgtttgatggtcatgataggaaaaggggcatgatattaatcctatcatgtgtttgatgcgcacatgataa-aaaaaggatatcattattattaa 3768029  T
Q  200 atgaaaaaattgctctcat 218  Q
    |||||||||||||||||||    
T  3768028 atgaaaaaattgctctcat 3768010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 5787115 - 5787191
Alignment:
Q  142 taatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5787115 taatactatcatgtgtttgatgcgcacatgataacaaacaggatatcattataattaaatgaaaaaattgctctcat 5787191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 34514195 - 34514117
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    ||||||| | |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  34514195 attaatcatgtcatatgtttgatgcgcacatgataacaaataggatatcattataattaaatgaaaaaattgatctcat 34514117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 37910474 - 37910547
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgct 213  Q
    ||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||    
T  37910474 attaatcatatcatgtgtttgatgcacacatgataacaaacaggatatcattataattaaatgaaaatattgct 37910547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 34940643 - 34940565
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    ||||||| |||||||||||||||||||||||||| ||||| || |||||| ||||||||||||||||||||| ||||||    
T  34940643 attaatcatatcatgtgtttgatgcgcacatgatgacaaacagaatatcaatataattaaatgaaaaaattgttctcat 34940565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 36198626 - 36198703
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    ||||||| |||||||||||||||| ||||||||||||||| | |||||||||||||||||||| |||||||||||||||    
T  36198626 attaatcttatcatgtgtttgatgtgcacatgataacaaatatgatatcattataattaaatg-aaaaattgctctcat 36198703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 45498984 - 45499062
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    ||||||| ||||||||||||||||| |||||||||||||| |  |||||||||||||||||||||||| ||||||||||    
T  45498984 attaatcatatcatgtgtttgatgcacacatgataacaaacacaatatcattataattaaatgaaaaatttgctctcat 45499062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 44289437 - 44289505
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaa 208  Q
    ||||||| | |||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||    
T  44289437 attaatcttctcatgtgtttgatgcgcacatgataacaaacatgatatcattataattaaaagaaaaaa 44289505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 28115543 - 28115607
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaa 204  Q
    ||||||| ||||||||||||||||  |||||||||||||| | ||||||||||||||||||||||    
T  28115543 attaatcatatcatgtgtttgatggccacatgataacaaacaagatatcattataattaaatgaa 28115607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 34512170 - 34512215
Alignment:
Q  173 taacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    ||||||| | ||||||||||||||||||||||||||||||| ||||    
T  34512170 taacaaacaagatatcattataattaaatgaaaaaattgctgtcat 34512215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 3320061 - 3320017
Alignment:
Q  149 atcatgtgtttgatgcgcacatgataacaaaaaggatatcattat 193  Q
    ||||| ||||||| ||||||||||||||||| | |||||||||||    
T  3320061 atcatatgtttgaggcgcacatgataacaaatatgatatcattat 3320017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 141
Target Start/End: Original strand, 45498901 - 45498937
Alignment:
Q  105 tccgtttgatggtcatgataggataggggcatgatat 141  Q
    |||||||||||||||||||||||||| |||| |||||    
T  45498901 tccgtttgatggtcatgataggatagaggcaggatat 45498937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 9315159 - 9315081
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  9315159 attaatcctatcatgtgtttgatgcgcacatgataacaaacaagatatcattataattaaatgaaaaaattgctctcat 9315081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 391095 - 391173
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    ||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  391095 attaatcttatcatgtgtttgatgtgcacatgataacaaataggatatcattataattaaatgaaaaaattgctctcat 391173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 12255464 - 12255386
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    ||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||    
T  12255464 attaatcttatcatgtgtttgatgcgcacatgataacaaacatgatatcattataattaaatgaaaaaattactctcat 12255386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 10789233 - 10789310
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    ||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  10789233 attaatcttatcatgtgtttgatgcgaacatgataacaaacaggatatcattataattaaatg-aaaaattgctctcat 10789310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 23404830 - 23404760
Alignment:
Q  148 tatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    |||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||| ||||    
T  23404830 tatcatgtgtttgatgtgcacatgataacaaacacgatatcattataattaaatgaaaaaattgctatcat 23404760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 32329691 - 32329614
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    ||||||| ||||||||||||||| |||||||||||||||| | |||||||||| |||||||||||||||||||||||||    
T  32329691 attaatcatatcatgtgtttgatacgcacatgataacaaatatgatatcatta-aattaaatgaaaaaattgctctcat 32329614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 24660620 - 24660681
Alignment:
Q  157 tttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    ||||||| |||| | |||||||| | |||||||||||||||||||||||||||| |||||||    
T  24660620 tttgatgtgcacgtaataacaaacatgatatcattataattaaatgaaaaaattactctcat 24660681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 25346862 - 25346940
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  25346862 attaatcctatcatgtgtttgatgcgcacatgataacaaataggatatcattgtaattaaatgaaaaaattgctctcat 25346940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 21091074 - 21091151
Alignment:
Q  141 ttaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  21091074 ttaatcctatcatgtgtttgatgcgcacatgataacaaacaagatatcattataattaaatgaaaaaattgctctcat 21091151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 139 - 218
Target Start/End: Original strand, 33007806 - 33007885
Alignment:
Q  139 tattaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    |||||||| ||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  33007806 tattaatcatatcatgtgtttgatgcacacatgataacaaacaagatatcattataattaaatgaaaaaattgctctcat 33007885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 31078220 - 31078142
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    |||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||    
T  31078220 attaattctatcatgtgtttgatgcgcacatgataacaaacatgatatcattataattaaatgaaaaaattgttctcat 31078142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 33134438 - 33134360
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    |||||||||||||||||||||||||||||||||||||  | | ||||||||||||||||||||||||||||||||||||    
T  33134438 attaatcctatcatgtgtttgatgcgcacatgataacgcacatgatatcattataattaaatgaaaaaattgctctcat 33134360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 29861219 - 29861141
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    ||||||| |||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||| ||||    
T  29861219 attaatcttatcatgtgtttgatgtgcacatgataacaaacacgatatcattataattaaatgaaaaaattgctttcat 29861141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 15921995 - 15922072
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    |||| ||||||||||| ||||| ||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||    
T  15921995 attattcctatcatgtatttgaagcgcacatgataacaaacaagatatcattataattaaat-aaaaaattgctctcat 15922072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 7883601 - 7883679
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    ||||||| ||||||||||||||||||||||||| || ||  |||||||||||||||||  || ||||||||||||||||    
T  7883601 attaatcatatcatgtgtttgatgcgcacatgaaaataagcaggatatcattataattttattaaaaaattgctctcat 7883679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 39351621 - 39351568
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattat 193  Q
    ||||||| |||||||||||||||||||||||||||||||| | |||||||||||    
T  39351621 attaatcatatcatgtgtttgatgcgcacatgataacaaatatgatatcattat 39351568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 3e-32; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 37346168 - 37346246
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  37346168 attaatcctatcatgtgtttgatgcgcacatgataacaaacatgatatcattataattaaatgaaaaaattgctctcat 37346246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 17703008 - 17702930
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    |||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  17703008 attaatcctatcatgtttttgatgcacacatgataacaaacaggatatcattataattaaatgaaaaaatttctctcat 17702930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 28622728 - 28622800
Alignment:
Q  146 cctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    ||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28622728 cctatcatgcgtttgatgcacacatgataacaaacaggatatcattataattaaatgaaaaaattgctctcat 28622800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 52268289 - 52268237
Alignment:
Q  141 ttaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattat 193  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  52268289 ttaatcctatcatgtgtttgatgcgcacatgataacaaacaggatataattat 52268237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 19910364 - 19910309
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataa 195  Q
    ||||||||||||||||||||||||||| |||||||||||| | ||||| |||||||    
T  19910364 attaatcctatcatgtgtttgatgcgcccatgataacaaacatgatattattataa 19910309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 10306618 - 10306686
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatga-taacaaaaaggatatcattataattaaatgaaaaa 207  Q
    ||||||| ||||| |||||||||| |||||||| ||||||| |  ||||||||| ||||||||||||||    
T  10306618 attaatcatatcacgtgtttgatgtgcacatgaataacaaacattatatcattaaaattaaatgaaaaa 10306686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 175
Target Start/End: Complemental strand, 30952179 - 30952148
Alignment:
Q  144 atcctatcatgtgtttgatgcgcacatgataa 175  Q
    ||||||||||||||||||||||||||||||||    
T  30952179 atcctatcatgtgtttgatgcgcacatgataa 30952148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 6e-30; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 16295688 - 16295610
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    ||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16295688 attaatcttatcatgtgtttgatgtgcacatgataacaaacaggatatcattataattaaatgaaaaaattgctctcat 16295610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 16303390 - 16303312
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    ||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16303390 attaatcttatcatgtgtttgatgtgcacatgataacaaacaggatatcattataattaaatgaaaaaattgctctcat 16303312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 27696582 - 27696504
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    |||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  27696582 attaatcctatcatgtgtttaatgtgcacatgataacaaacaggatatcattataattaaatgaaaaaattgctctcat 27696504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 40953581 - 40953503
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    ||||||| |||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||    
T  40953581 attaatcatatcatgtgtttgatgcgcacatgataacaaacatgatatcatcataattaaatgaaaaaattgctctcat 40953503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 3174269 - 3174191
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    |||||||||||||||||||||||||| ||||||||||||| |  |||||||||||||||||||||||||||||| ||||    
T  3174269 attaatcctatcatgtgtttgatgcgtacatgataacaaacataatatcattataattaaatgaaaaaattgctttcat 3174191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 138 - 218
Target Start/End: Complemental strand, 37246514 - 37246434
Alignment:
Q  138 atattaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    ||||||||| |||||||||||||||  |||||||| |||||| |||||||||||||||||||||||| |||||||||||||    
T  37246514 atattaatcttatcatgtgtttgatttgcacatgaaaacaaacaggatatcattataattaaatgaataaattgctctcat 37246434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 42180662 - 42180586
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctc 216  Q
    ||||||||||||||  |||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||    
T  42180662 attaatcctatcatacgtttgatgcgcacatgataacaaacatgatatcattataattaaataaaaaaattgctctc 42180586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 43597184 - 43597106
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    |||||||||||||| ||||||||| ||||||||||||||| |  |||||||||||||||||||||||||||| ||||||    
T  43597184 attaatcctatcatatgtttgatgggcacatgataacaaatataatatcattataattaaatgaaaaaattgttctcat 43597106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 15268978 - 15268900
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    |||||||||||||| |||||| || ||||||||||||||| | |||||||||||||||||||| ||||||||| |||||    
T  15268978 attaatcctatcatatgtttggtgtgcacatgataacaaacaagatatcattataattaaatggaaaaattgcactcat 15268900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 11656158 - 11656225
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaa 207  Q
    ||||||| |||||||||||||||||| ||||||||||||| | | || ||||||||||||||||||||    
T  11656158 attaatcatatcatgtgtttgatgcgtacatgataacaaacaaggtaccattataattaaatgaaaaa 11656225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 511989 - 511936
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattat 193  Q
    ||||||| ||||||||||||||| ||||||||||| |||| | |||||||||||    
T  511989 attaatcttatcatgtgtttgattcgcacatgataccaaataagatatcattat 511936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 175
Target Start/End: Complemental strand, 23586090 - 23586059
Alignment:
Q  144 atcctatcatgtgtttgatgcgcacatgataa 175  Q
    ||||||||||||||||||||||||||||||||    
T  23586090 atcctatcatgtgtttgatgcgcacatgataa 23586059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 6e-30; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 40700836 - 40700914
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    ||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  40700836 attaatcctatcatgtgtttgatgcacacatgataacaaacatgatatcattataattaaatgaaaaaattgctctcat 40700914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 28457596 - 28457671
Alignment:
Q  143 aatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  28457596 aatcctatcatatgtttgatgcgcacatgataacaaataagatatcattataattaaatgaaaaaattgctctcat 28457671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 54819668 - 54819737
Alignment:
Q  140 attaatcctatcatgtgtttgatg-cgcacatgataacaaaaaggatatcattataattaaatgaaaaaa 208  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||    
T  54819668 attaatcctatcatgtgtttgatgtcgcacatgataacaaacaggatattattataattaaatgaaaaaa 54819737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 21748218 - 21748295
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaa-aggatatcattataattaaatgaaaaaattgctctcat 218  Q
    ||||||| |||||||||||||||||  ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  21748218 attaatcatatcatgtgtttgatgc--acatgataaaaaaacaggatatcattataattaaatgaaaaaattgttctcat 21748295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 193
Target Start/End: Original strand, 41864800 - 41864853
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattat 193  Q
    ||||||| |||||||| |||||||| |||||||||||||| | || ||||||||    
T  41864800 attaatcttatcatgtatttgatgcacacatgataacaaataagaaatcattat 41864853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 6e-30; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 27339063 - 27338985
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    ||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  27339063 attaatcatatcatgtgtttgatgcgcacatgataacaaaccggatatcattataattaaatgaaaaaattgctctcat 27338985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 218
Target Start/End: Original strand, 40619503 - 40619583
Alignment:
Q  138 atattaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    ||||||||| |||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  40619503 atattaatcttatcatgtgtttgatgtgcacatgataacaaacatgatatcattataattaaatgaaaaaattgctctcat 40619583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 13349341 - 13349419
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    |||||||||||| ||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  13349341 attaatcctatcgtgtgtttgatgcgcatatgataacaaacaggatattattataattaaatgaaaaaattgctctcat 13349419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 13995549 - 13995616
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaa 207  Q
    |||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||    
T  13995549 attaatcctatcatgtgtttgatgcgcacatgataagaaacatgatatcattataattaaatgaaaaa 13995616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 19696036 - 19695958
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    ||||||| ||| |||||||||||| ||||||||||| ||| | ||||||||||||||||||||||||||||||||||||    
T  19696036 attaatcttattatgtgtttgatgtgcacatgataataaacatgatatcattataattaaatgaaaaaattgctctcat 19695958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 37485925 - 37485847
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    ||||||| |||||||||||||||| ||||||||||||||| |  ||| |||||||||||||||||||||||||||||||    
T  37485925 attaatcatatcatgtgtttgatgtgcacatgataacaaacataataccattataattaaatgaaaaaattgctctcat 37485847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 41595592 - 41595515
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    ||||||||||| |||||||||||| |||||| |||||||| | |||||||||||||| ||||| |||||||||||||||    
T  41595592 attaatcctattatgtgtttgatgtgcacataataacaaacatgatatcattataatcaaatg-aaaaattgctctcat 41595515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 15665205 - 15665277
Alignment:
Q  138 atattaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaatt 210  Q
    ||||||||| |||||||||||| |||| |||||||||| ||| ||| |||||||||| ||||||||| |||||    
T  15665205 atattaatcttatcatgtgttttatgcacacatgataataaacagggtatcattatatttaaatgaataaatt 15665277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 187
Target Start/End: Original strand, 15262243 - 15262281
Alignment:
Q  149 atcatgtgtttgatgcgcacatgataacaaaaaggatat 187  Q
    |||||||||||||||| |||||||||||||| |||||||    
T  15262243 atcatgtgtttgatgcacacatgataacaaataggatat 15262281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 4e-25; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 34703390 - 34703312
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    |||||||||||||||| ||| | ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  34703390 attaatcctatcatgtattttacgcgcacatgataacaaacatgatatcattataattaaatgaaaaaattgctctcat 34703312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 34866253 - 34866331
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    ||||||| |||||||||||||||||||||||||||||||| | || |||||||||||||||| ||||||||||||||||    
T  34866253 attaatcttatcatgtgtttgatgcgcacatgataacaaacaagacatcattataattaaattaaaaaattgctctcat 34866331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 18502879 - 18502938
Alignment:
Q  140 attaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaa 199  Q
    |||||| ||||||||||||||| ||| ||||||||||||| |||||||||||||||||||    
T  18502879 attaatactatcatgtgtttgaagcgtacatgataacaaacaggatatcattataattaa 18502938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 6110447 - 6110373
Alignment:
Q  143 aatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatgaaaaaattgctctcat 218  Q
    ||||||| ||||||||||||||||| ||||||||||| |  |||| |||||||||||||| | |||||||||||||    
T  6110447 aatcctaacatgtgtttgatgcgcaaatgataacaaataaaatattattataattaaatg-agaaattgctctcat 6110373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 17508576 - 17508640
Alignment:
Q  139 tattaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatga 203  Q
    |||||||| |||||||| ||||||||| ||||||||||||| |  ||||||||||||||| ||||    
T  17508576 tattaatcatatcatgtatttgatgcgtacatgataacaaacataatatcattataattatatga 17508640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 17544638 - 17544574
Alignment:
Q  139 tattaatcctatcatgtgtttgatgcgcacatgataacaaaaaggatatcattataattaaatga 203  Q
    |||||||| |||||||| ||||||||| ||||||||||||| |  ||||||||||||||| ||||    
T  17544638 tattaatcatatcatgtatttgatgcgtacatgataacaaacataatatcattataattatatga 17544574  T

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Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 193
Target Start/End: Complemental strand, 25103083 - 25103038
Alignment:
Q  148 tatcatgtgtttgatgcgcacatgataacaaaaaggatatcattat 193  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||    
T  25103083 tatcatgtgattgatgcgcacatgataacaaatagaatatcattat 25103038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 33819421 - 33819461
Alignment:
Q  138 atattaatcctatcatgtgtttgatgcgcacatgataacaa 178  Q
    ||||| ||||||| |||||||||| ||||||||||||||||    
T  33819421 atatttatcctatgatgtgtttgacgcgcacatgataacaa 33819461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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