View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11866_high_19 (Length: 254)
Name: NF11866_high_19
Description: NF11866
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11866_high_19 |
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Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 3 - 241
Target Start/End: Original strand, 10858706 - 10858944
Alignment:
| Q |
3 |
accagccctgatgcccttccctttttccctgaaggtattgactttagagcagttgccaaatttgaagaatgtttggaatgaagatcctcatggaattcta |
102 |
Q |
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| T |
10858706 |
accagccctgatgcccttccctttttccctgaaggtattgactttagagcagttgccaaatttggagaatgtttggaatgaagatcctcatggaattcta |
10858805 |
T |
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| Q |
103 |
acaattgaacttctaaaacaagtatatgttgatgactgtaaaggccttacaagtttgttcccagcctcagtagccaaagatcttgtgaaacttgaagatc |
202 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10858806 |
acaattgaacttctaaaacaagtatatgttgatgactgtaaaggccttataagtttgttcccagcctcagtagccaaagatcttgtgaaacttgaagatc |
10858905 |
T |
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| Q |
203 |
tacacgtgaaacactgtgaagagctgatggttattgttg |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
10858906 |
tacacgtgaaacactgtgaagagctgatggttattgttg |
10858944 |
T |
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