View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11866_low_22 (Length: 254)
Name: NF11866_low_22
Description: NF11866
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11866_low_22 |
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Alignment Details
Target: chr3 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 53120590 - 53120358
Alignment:
| Q |
3 |
atttcgttaaataaaatagagttttaaaaagataatgttactagcattccgttttatatagccaccattaagatccacttaggataaaatttgttctcat |
102 |
Q |
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| T |
53120590 |
atttcgctcaataaaatagagttttaaaaagataatgttactagcattccgttttatctagccaccattaagatccacttaggataaaatttgttctcat |
53120491 |
T |
|
| Q |
103 |
ataaaaccttttctttgtaataaatctaatactacaagttaattaccacttaatactaattatcccaatagaagtaaactgttattatgaacaaacttta |
202 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |
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| T |
53120490 |
gtaaaaccttttctttgtaataaatctaatactacaagttaattaccacttaatactaattatcccaataaaagtaaactcttattatgaacaaacttta |
53120391 |
T |
|
| Q |
203 |
cttattatatatcgggcatttcataactcctta |
235 |
Q |
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|||||||||||||||||||||||| |||||||| |
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| T |
53120390 |
cttattatatatcgggcatttcattactcctta |
53120358 |
T |
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