View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11866_low_26 (Length: 218)
Name: NF11866_low_26
Description: NF11866
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11866_low_26 |
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Alignment Details
Target: chr1 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 30 - 201
Target Start/End: Complemental strand, 39265812 - 39265641
Alignment:
| Q |
30 |
acccataggctaggtcaactctatcattggtttcattatccctataacggtcactagaaaaagatatgtgctactactatcccaatgcagcgaaactagg |
129 |
Q |
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| T |
39265812 |
acccataggctaggtcaactctatcattggtttcattatccctataacgatcactagaaaaagatatgtgctactactatcccaatgcagcgaaactagg |
39265713 |
T |
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| Q |
130 |
tggtgctatgtaagaaatgtgaaaggtgcttactggacatgaaaataataatgtctggactaggaaaataat |
201 |
Q |
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| T |
39265712 |
tggtgctatgtaagaaatgtgaaaggtgcttactggacatgaaaataataatgtctggactaggaaaataat |
39265641 |
T |
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