View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11866_low_29 (Length: 207)

Name: NF11866_low_29
Description: NF11866
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11866_low_29
NF11866_low_29
[»] chr5 (47 HSPs)
chr5 (41-205)||(32305815-32305979)
chr5 (56-203)||(10721798-10721945)
chr5 (56-203)||(16752955-16753104)
chr5 (57-203)||(28494857-28495003)
chr5 (57-205)||(41834443-41834592)
chr5 (69-203)||(27307086-27307220)
chr5 (69-207)||(16752607-16752745)
chr5 (70-203)||(22651371-22651505)
chr5 (139-207)||(28495223-28495291)
chr5 (70-171)||(17260352-17260454)
chr5 (69-204)||(27307443-27307581)
chr5 (1-61)||(32305754-32305814)
chr5 (57-201)||(4966829-4966973)
chr5 (69-192)||(13557017-13557140)
chr5 (101-203)||(28289741-28289844)
chr5 (69-203)||(21371082-21371217)
chr5 (129-202)||(164276-164350)
chr5 (142-203)||(14215340-14215402)
chr5 (101-203)||(18150109-18150213)
chr5 (107-203)||(28290030-28290127)
chr5 (101-177)||(20266327-20266404)
chr5 (139-203)||(39083455-39083520)
chr5 (129-203)||(2864839-2864915)
chr5 (129-203)||(5819014-5819090)
chr5 (57-199)||(38900657-38900800)
chr5 (148-205)||(16018969-16019027)
chr5 (129-205)||(25000471-25000549)
chr5 (143-203)||(29454840-29454901)
chr5 (57-203)||(4967155-4967304)
chr5 (139-202)||(8419008-8419072)
chr5 (129-203)||(18183055-18183131)
chr5 (57-196)||(32697616-32697759)
chr5 (142-203)||(15709353-15709415)
chr5 (154-203)||(24331672-24331722)
chr5 (143-203)||(8461315-8461376)
chr5 (139-203)||(14340793-14340858)
chr5 (139-203)||(19291452-19291517)
chr5 (57-138)||(28595193-28595274)
chr5 (129-203)||(8647822-8647898)
chr5 (148-203)||(19359520-19359576)
chr5 (57-121)||(20260938-20261002)
chr5 (69-121)||(22651780-22651832)
chr5 (129-207)||(8647523-8647602)
chr5 (103-177)||(14464929-14465004)
chr5 (139-203)||(5161678-5161743)
chr5 (129-185)||(6018398-6018455)
chr5 (57-203)||(15029695-15029842)
[»] chr2 (59 HSPs)
chr2 (57-207)||(28143412-28143562)
chr2 (57-201)||(31797166-31797310)
chr2 (57-207)||(14942226-14942379)
chr2 (57-182)||(2190482-2190609)
chr2 (101-203)||(33920669-33920772)
chr2 (57-203)||(42192253-42192400)
chr2 (101-203)||(43160066-43160170)
chr2 (139-203)||(18450926-18450991)
chr2 (101-203)||(4355812-4355915)
chr2 (57-203)||(11540024-11540171)
chr2 (101-203)||(15550730-15550834)
chr2 (57-203)||(42192628-42192776)
chr2 (101-203)||(13399479-13399582)
chr2 (129-203)||(43058717-43058792)
chr2 (101-203)||(9330180-9330284)
chr2 (139-203)||(5560936-5561001)
chr2 (101-203)||(4808936-4809039)
chr2 (129-203)||(7446730-7446806)
chr2 (69-203)||(16953320-16953455)
chr2 (129-203)||(40815430-40815506)
chr2 (139-202)||(43160397-43160461)
chr2 (101-203)||(43216095-43216198)
chr2 (69-203)||(11539662-11539798)
chr2 (101-203)||(16175735-16175839)
chr2 (107-203)||(44219707-44219804)
chr2 (142-202)||(3025848-3025909)
chr2 (139-203)||(6949547-6949612)
chr2 (142-202)||(8425453-8425514)
chr2 (139-203)||(33920997-33921062)
chr2 (101-202)||(38008007-38008110)
chr2 (69-203)||(62982-63117)
chr2 (129-203)||(22374709-22374785)
chr2 (129-207)||(26538459-26538539)
chr2 (108-203)||(32418221-32418317)
chr2 (129-202)||(1978494-1978569)
chr2 (154-203)||(14432525-14432575)
chr2 (139-203)||(63344-63409)
chr2 (139-203)||(20128123-20128188)
chr2 (139-203)||(22445735-22445800)
chr2 (148-203)||(239736-239792)
chr2 (139-202)||(13399807-13399871)
chr2 (129-203)||(28616998-28617074)
chr2 (129-203)||(40027524-40027600)
chr2 (140-203)||(43215805-43215869)
chr2 (129-207)||(239437-239516)
chr2 (129-207)||(11090606-11090685)
chr2 (69-155)||(25336034-25336121)
chr2 (129-207)||(26538182-26538261)
chr2 (129-207)||(40815726-40815805)
chr2 (107-203)||(4356142-4356239)
chr2 (139-203)||(13315591-13315657)
chr2 (107-203)||(38008337-38008434)
chr2 (142-207)||(14432241-14432306)
chr2 (139-203)||(15551060-15551125)
chr2 (139-203)||(16953032-16953097)
chr2 (139-203)||(17061003-17061068)
chr2 (139-203)||(20127832-20127897)
chr2 (101-195)||(649584-649679)
chr2 (148-203)||(11090904-11090960)
[»] chr3 (84 HSPs)
chr3 (57-207)||(36701478-36701629)
chr3 (56-203)||(2323391-2323538)
chr3 (69-207)||(27200074-27200212)
chr3 (57-203)||(50900545-50900692)
chr3 (101-205)||(37847204-37847308)
chr3 (69-207)||(55192143-55192281)
chr3 (57-204)||(50900913-50901060)
chr3 (71-205)||(8874070-8874205)
chr3 (57-207)||(49407809-49407959)
chr3 (69-207)||(37075711-37075852)
chr3 (57-203)||(52237203-52237350)
chr3 (56-207)||(27199714-27199866)
chr3 (69-207)||(49408165-49408302)
chr3 (56-203)||(43222402-43222550)
chr3 (139-203)||(8873786-8873850)
chr3 (57-203)||(25534903-25535051)
chr3 (57-203)||(40839038-40839185)
chr3 (101-203)||(52236873-52236976)
chr3 (101-207)||(36701163-36701272)
chr3 (57-203)||(40275106-40275255)
chr3 (107-203)||(50662798-50662895)
chr3 (56-203)||(37076060-37076208)
chr3 (129-203)||(5137365-5137441)
chr3 (129-203)||(26837445-26837521)
chr3 (139-207)||(33412389-33412457)
chr3 (129-203)||(37727314-37727390)
chr3 (101-203)||(51828014-51828117)
chr3 (57-203)||(55389618-55389765)
chr3 (142-203)||(31778752-31778814)
chr3 (57-203)||(43222775-43222923)
chr3 (139-203)||(51828343-51828408)
chr3 (129-203)||(22424899-22424975)
chr3 (129-203)||(24300641-24300717)
chr3 (129-203)||(32535044-32535120)
chr3 (129-203)||(39555663-39555739)
chr3 (57-203)||(40275480-40275626)
chr3 (129-203)||(41047083-41047159)
chr3 (129-203)||(43973824-43973900)
chr3 (101-203)||(46013479-46013582)
chr3 (69-203)||(51472880-51473015)
chr3 (57-203)||(52375717-52375864)
chr3 (101-203)||(49720428-49720531)
chr3 (58-202)||(330223-330368)
chr3 (129-205)||(29801798-29801876)
chr3 (107-203)||(44676858-44676955)
chr3 (69-203)||(46013808-46013944)
chr3 (101-203)||(51828596-51828700)
chr3 (139-203)||(14654577-14654642)
chr3 (139-203)||(40838747-40838812)
chr3 (139-203)||(47431792-47431857)
chr3 (139-203)||(49951932-49951997)
chr3 (139-203)||(55389983-55390048)
chr3 (129-203)||(4275748-4275824)
chr3 (129-203)||(17464576-17464652)
chr3 (129-203)||(20840945-20841021)
chr3 (129-203)||(25853319-25853395)
chr3 (129-203)||(27393746-27393822)
chr3 (129-203)||(30098147-30098223)
chr3 (101-203)||(34105034-34105139)
chr3 (101-203)||(38535681-38535784)
chr3 (101-203)||(44676529-44676632)
chr3 (101-203)||(52375384-52375487)
chr3 (57-203)||(22370609-22370757)
chr3 (139-203)||(32730775-32730840)
chr3 (139-203)||(51473241-51473306)
chr3 (69-203)||(2044296-2044431)
chr3 (101-182)||(12140994-12141076)
chr3 (129-203)||(23644849-23644925)
chr3 (129-203)||(26274652-26274728)
chr3 (139-203)||(34104733-34104797)
chr3 (129-207)||(5137065-5137144)
chr3 (101-167)||(12141113-12141180)
chr3 (129-207)||(37727014-37727093)
chr3 (129-207)||(41046785-41046864)
chr3 (139-182)||(41998636-41998679)
chr3 (107-203)||(38535372-38535469)
chr3 (107-203)||(43678358-43678455)
chr3 (142-207)||(24300937-24301002)
chr3 (57-130)||(33412614-33412687)
chr3 (142-207)||(39555958-39556023)
chr3 (139-203)||(41998325-41998390)
chr3 (139-203)||(51828926-51828991)
chr3 (101-203)||(32730446-32730549)
chr3 (101-203)||(43678670-43678773)
[»] scaffold0007 (4 HSPs)
scaffold0007 (57-207)||(205750-205900)
scaffold0007 (125-207)||(205031-205114)
scaffold0007 (125-207)||(205461-205543)
scaffold0007 (57-143)||(210784-210870)
[»] chr7 (59 HSPs)
chr7 (57-203)||(34595158-34595305)
chr7 (57-207)||(35578912-35579062)
chr7 (69-202)||(9393761-9393894)
chr7 (69-204)||(39136711-39136846)
chr7 (56-182)||(33880632-33880759)
chr7 (68-201)||(4477726-4477860)
chr7 (69-205)||(9394115-9394251)
chr7 (57-181)||(49064047-49064171)
chr7 (108-203)||(34594647-34594742)
chr7 (69-207)||(35579268-35579406)
chr7 (93-190)||(45815465-45815563)
chr7 (139-207)||(32427402-32427470)
chr7 (107-203)||(25637584-25637681)
chr7 (107-203)||(9181595-9181692)
chr7 (101-203)||(16081685-16081788)
chr7 (129-203)||(19590909-19590985)
chr7 (148-203)||(19830804-19830860)
chr7 (101-203)||(28687885-28687988)
chr7 (101-203)||(26026374-26026478)
chr7 (129-201)||(37787153-37787227)
chr7 (139-203)||(16081394-16081459)
chr7 (101-203)||(7732545-7732648)
chr7 (139-203)||(33880971-33881035)
chr7 (101-203)||(11973788-11973891)
chr7 (129-202)||(32004699-32004774)
chr7 (129-202)||(35288988-35289063)
chr7 (130-203)||(38859025-38859100)
chr7 (69-203)||(48247977-48248113)
chr7 (57-166)||(5334243-5334352)
chr7 (139-203)||(24929689-24929754)
chr7 (101-202)||(25637254-25637357)
chr7 (139-203)||(27245299-27245364)
chr7 (57-200)||(28687606-28687750)
chr7 (69-203)||(39388652-39388789)
chr7 (101-203)||(9181795-9181901)
chr7 (139-203)||(786878-786943)
chr7 (101-167)||(45815398-45815466)
chr7 (139-203)||(48247686-48247751)
chr7 (129-203)||(2658924-2659000)
chr7 (57-203)||(2758084-2758231)
chr7 (129-203)||(4641828-4641904)
chr7 (129-203)||(29099935-29100011)
chr7 (129-203)||(34533876-34533952)
chr7 (129-207)||(19830505-19830584)
chr7 (129-207)||(34534172-34534251)
chr7 (129-207)||(37786852-37786931)
chr7 (129-207)||(38858728-38858807)
chr7 (107-203)||(5745702-5745799)
chr7 (69-203)||(14311340-14311476)
chr7 (142-203)||(23952830-23952892)
chr7 (107-203)||(26026704-26026801)
chr7 (107-203)||(27245590-27245687)
chr7 (139-203)||(11971433-11971498)
chr7 (139-203)||(14311673-14311738)
chr7 (139-203)||(15712460-15712525)
chr7 (162-203)||(26048067-26048108)
chr7 (136-203)||(26048333-26048401)
chr7 (101-201)||(35161189-35161291)
chr7 (70-158)||(39136965-39137053)
[»] chr6 (35 HSPs)
chr6 (69-203)||(35163572-35163708)
chr6 (69-205)||(32836032-32836163)
chr6 (81-182)||(11523721-11523824)
chr6 (69-207)||(32836379-32836517)
chr6 (69-172)||(35163209-35163312)
chr6 (101-182)||(33095771-33095853)
chr6 (57-182)||(835407-835532)
chr6 (129-207)||(10900024-10900104)
chr6 (107-203)||(5114531-5114628)
chr6 (101-203)||(31073528-31073631)
chr6 (101-202)||(5120856-5120958)
chr6 (139-203)||(20741485-20741550)
chr6 (139-203)||(31573820-31573885)
chr6 (129-203)||(11445371-11445447)
chr6 (129-203)||(12935242-12935318)
chr6 (129-203)||(22219737-22219813)
chr6 (101-203)||(31574111-31574214)
chr6 (139-182)||(22534165-22534208)
chr6 (101-202)||(25468906-25469010)
chr6 (142-203)||(31470414-31470476)
chr6 (139-203)||(25472398-25472463)
chr6 (139-203)||(28636582-28636647)
chr6 (139-203)||(29891466-29891531)
chr6 (148-203)||(11276695-11276751)
chr6 (99-177)||(28636347-28636425)
chr6 (69-182)||(33096014-33096132)
chr6 (129-207)||(10900311-10900390)
chr6 (148-207)||(12935538-12935597)
chr6 (142-196)||(15827739-15827794)
chr6 (142-207)||(20741199-20741264)
chr6 (139-203)||(30251077-30251142)
chr6 (179-207)||(2322600-2322628)
chr6 (179-207)||(11445123-11445151)
chr6 (148-203)||(18505024-18505080)
chr6 (129-203)||(23075512-23075588)
[»] chr1 (74 HSPs)
chr1 (57-207)||(39485078-39485228)
chr1 (57-200)||(23526671-23526815)
chr1 (57-201)||(29021252-29021398)
chr1 (69-205)||(44802555-44802692)
chr1 (59-207)||(17088161-17088314)
chr1 (69-203)||(48173773-48173909)
chr1 (57-203)||(50926627-50926774)
chr1 (57-207)||(17088522-17088672)
chr1 (72-203)||(9833538-9833670)
chr1 (57-192)||(45048533-45048668)
chr1 (57-182)||(44291314-44291442)
chr1 (57-203)||(50926243-50926392)
chr1 (70-199)||(44291701-44291831)
chr1 (69-205)||(45048180-45048316)
chr1 (129-207)||(29307322-29307402)
chr1 (69-203)||(52335896-52336031)
chr1 (70-203)||(29020906-29021040)
chr1 (139-203)||(9992250-9992315)
chr1 (101-203)||(8230027-8230130)
chr1 (57-203)||(44954612-44954759)
chr1 (129-205)||(17433597-17433675)
chr1 (69-203)||(6224722-6224859)
chr1 (139-203)||(17641750-17641815)
chr1 (57-177)||(23526942-23527063)
chr1 (69-203)||(30786796-30786932)
chr1 (101-203)||(1837562-1837665)
chr1 (129-207)||(9019343-9019423)
chr1 (129-203)||(18984503-18984579)
chr1 (136-203)||(37505454-37505522)
chr1 (142-203)||(5962677-5962739)
chr1 (107-203)||(10278936-10279030)
chr1 (107-203)||(21938626-21938723)
chr1 (129-201)||(50970363-50970437)
chr1 (139-203)||(8229735-8229800)
chr1 (107-202)||(9992542-9992638)
chr1 (139-203)||(16299068-16299133)
chr1 (139-203)||(33144013-33144078)
chr1 (139-203)||(34555766-34555831)
chr1 (57-203)||(2868094-2868241)
chr1 (129-203)||(15173478-15173554)
chr1 (129-203)||(17112366-17112442)
chr1 (129-203)||(21856127-21856203)
chr1 (129-203)||(29870003-29870079)
chr1 (101-203)||(34555436-34555541)
chr1 (129-203)||(39154404-39154480)
chr1 (139-202)||(50305169-50305233)
chr1 (129-202)||(4636356-4636431)
chr1 (101-203)||(10278605-10278709)
chr1 (139-203)||(1744422-1744487)
chr1 (112-203)||(15646260-15646353)
chr1 (139-203)||(23340278-23340343)
chr1 (139-203)||(44954321-44954386)
chr1 (101-203)||(443937-444040)
chr1 (129-203)||(8678626-8678702)
chr1 (101-203)||(16298739-16298842)
chr1 (101-203)||(37421217-37421322)
chr1 (129-207)||(5540199-5540278)
chr1 (129-207)||(5962959-5963038)
chr1 (129-207)||(15173181-15173260)
chr1 (129-207)||(15646576-15646655)
chr1 (129-207)||(29307038-29307117)
chr1 (143-182)||(48174122-48174161)
chr1 (129-207)||(50970659-50970738)
chr1 (107-203)||(4080084-4080181)
chr1 (57-119)||(25274769-25274831)
chr1 (101-203)||(29438987-29439091)
chr1 (69-203)||(37505092-37505228)
chr1 (139-203)||(17641460-17641525)
chr1 (162-203)||(30787158-30787199)
chr1 (142-207)||(33144300-33144365)
chr1 (148-203)||(5539921-5539977)
chr1 (129-203)||(26859144-26859220)
chr1 (127-170)||(36229399-36229443)
chr1 (101-203)||(44582114-44582217)
[»] scaffold0108 (2 HSPs)
scaffold0108 (57-207)||(15126-15276)
scaffold0108 (56-182)||(15506-15632)
[»] chr4 (61 HSPs)
chr4 (58-207)||(35193322-35193471)
chr4 (59-207)||(17503989-17504137)
chr4 (57-203)||(229545-229692)
chr4 (101-203)||(18965197-18965300)
chr4 (69-207)||(40160119-40160257)
chr4 (69-203)||(24336149-24336284)
chr4 (69-202)||(24335786-24335920)
chr4 (56-191)||(40160489-40160624)
chr4 (57-203)||(229174-229321)
chr4 (69-190)||(35193702-35193823)
chr4 (129-205)||(46193490-46193568)
chr4 (139-207)||(17504341-17504410)
chr4 (112-203)||(18965522-18965614)
chr4 (69-203)||(33689854-33689988)
chr4 (57-158)||(23986533-23986635)
chr4 (101-203)||(34807173-34807277)
chr4 (142-203)||(48526565-48526627)
chr4 (139-203)||(12593409-12593474)
chr4 (139-203)||(14439923-14439988)
chr4 (139-203)||(45838933-45838998)
chr4 (129-203)||(11153231-11153307)
chr4 (129-203)||(12503521-12503597)
chr4 (139-202)||(15523331-15523395)
chr4 (129-203)||(20470895-20470971)
chr4 (148-203)||(22434284-22434340)
chr4 (101-203)||(28465138-28465241)
chr4 (129-203)||(45082808-45082884)
chr4 (101-203)||(46737041-46737144)
chr4 (101-203)||(54440628-54440729)
chr4 (129-202)||(25938056-25938131)
chr4 (129-203)||(51021180-51021255)
chr4 (107-203)||(12593087-12593184)
chr4 (107-203)||(14440214-14440311)
chr4 (101-203)||(19528926-19529030)
chr4 (101-203)||(24851851-24851955)
chr4 (139-203)||(21034622-21034687)
chr4 (139-203)||(26974379-26974444)
chr4 (139-203)||(35643662-35643727)
chr4 (139-203)||(46736750-46736815)
chr4 (129-203)||(12234713-12234789)
chr4 (129-203)||(25447332-25447408)
chr4 (129-203)||(54995154-54995230)
chr4 (110-203)||(34807525-34807619)
chr4 (101-203)||(34789768-34789872)
chr4 (107-203)||(56077710-56077807)
chr4 (139-203)||(6616768-6616833)
chr4 (139-203)||(16214881-16214946)
chr4 (139-203)||(24851560-24851625)
chr4 (139-203)||(41608470-41608535)
chr4 (129-203)||(2118378-2118454)
chr4 (129-203)||(4219943-4220019)
chr4 (139-202)||(28166099-28166163)
chr4 (129-207)||(33109769-33109848)
chr4 (142-203)||(18751698-18751760)
chr4 (107-203)||(34789445-34789542)
chr4 (101-201)||(45838604-45838705)
chr4 (57-143)||(51309952-51310038)
chr4 (107-203)||(54440955-54441052)
chr4 (101-181)||(6617070-6617151)
chr4 (129-205)||(22170320-22170397)
chr4 (139-203)||(41114254-41114319)
[»] chr8 (45 HSPs)
chr8 (57-207)||(28876916-28877067)
chr8 (147-205)||(18805266-18805324)
chr8 (57-203)||(35427198-35427345)
chr8 (101-203)||(599589-599692)
chr8 (101-203)||(41260647-41260750)
chr8 (69-203)||(7911002-7911137)
chr8 (101-203)||(28254812-28254915)
chr8 (57-207)||(28877272-28877422)
chr8 (69-203)||(9796751-9796886)
chr8 (69-202)||(18049615-18049750)
chr8 (129-203)||(13225023-13225099)
chr8 (101-203)||(26252866-26252969)
chr8 (57-203)||(42035785-42035932)
chr8 (101-202)||(18049978-18050080)
chr8 (107-203)||(5731198-5731295)
chr8 (101-203)||(6115496-6115600)
chr8 (103-203)||(16578482-16578583)
chr8 (139-203)||(5730912-5730977)
chr8 (139-203)||(28254521-28254586)
chr8 (143-203)||(33743021-33743082)
chr8 (129-203)||(9928994-9929070)
chr8 (129-203)||(11656841-11656917)
chr8 (129-203)||(12572235-12572311)
chr8 (129-203)||(19176375-19176451)
chr8 (101-182)||(16578165-16578247)
chr8 (130-203)||(44831333-44831408)
chr8 (129-207)||(44831626-44831705)
chr8 (57-203)||(34799092-34799240)
chr8 (139-203)||(599884-599949)
chr8 (139-203)||(9797112-9797177)
chr8 (139-203)||(18428147-18428212)
chr8 (139-203)||(35693965-35694030)
chr8 (129-203)||(33328524-33328600)
chr8 (101-203)||(34799469-34799572)
chr8 (129-203)||(41681518-41681594)
chr8 (56-143)||(7910628-7910714)
chr8 (129-197)||(4629882-4629952)
chr8 (100-158)||(10047068-10047126)
chr8 (101-177)||(15255910-15255987)
chr8 (129-201)||(34540934-34541008)
chr8 (101-203)||(42036157-42036261)
chr8 (139-203)||(15256214-15256279)
chr8 (142-202)||(31133605-31133666)
chr8 (139-203)||(35426908-35426973)
chr8 (139-203)||(35694256-35694321)
[»] scaffold0712 (2 HSPs)
scaffold0712 (101-203)||(6777-6885)
scaffold0712 (107-202)||(6455-6551)
[»] scaffold0709 (2 HSPs)
scaffold0709 (101-203)||(6795-6903)
scaffold0709 (107-202)||(6473-6569)
[»] scaffold0951 (2 HSPs)
scaffold0951 (129-203)||(2051-2127)
scaffold0951 (129-207)||(1752-1831)
[»] scaffold0157 (1 HSPs)
scaffold0157 (129-203)||(16880-16956)
[»] scaffold0027 (1 HSPs)
scaffold0027 (129-207)||(42254-42334)
[»] scaffold0097 (1 HSPs)
scaffold0097 (57-203)||(46279-46427)
[»] scaffold0021 (2 HSPs)
scaffold0021 (101-182)||(159288-159370)
scaffold0021 (69-182)||(159044-159159)
[»] scaffold0273 (2 HSPs)
scaffold0273 (129-207)||(4588-4667)
scaffold0273 (129-203)||(4288-4364)
[»] scaffold0025 (1 HSPs)
scaffold0025 (139-203)||(78412-78477)
[»] scaffold0417 (1 HSPs)
scaffold0417 (129-203)||(11007-11083)
[»] scaffold1223 (2 HSPs)
scaffold1223 (129-206)||(1122-1201)
scaffold1223 (129-205)||(838-914)
[»] scaffold0295 (1 HSPs)
scaffold0295 (159-203)||(5179-5224)
[»] scaffold0019 (1 HSPs)
scaffold0019 (142-207)||(134054-134119)


Alignment Details
Target: chr5 (Bit Score: 121; Significance: 3e-62; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 41 - 205
Target Start/End: Original strand, 32305815 - 32305979
Alignment:
Q  41 ccctcatgccaaccctttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtt 140  Q
    ||||||||||||||||||||||||||| |||||||| |||||||  ||||||||||| | ||||| ||||||||||||||| | |||||| |||||||||    
T  32305815 ccctcatgccaaccctttttggtcatcgcattttgatcagctcacgaaaattgttctacctcttttaaatcgaacaaaatcgtccctaaactatcatgtt 32305914  T
Q  141 tttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagac 205  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32305915 tttgcagttttagtcctacctcttattttcaactccagaaacacagagaaatgacagttttagac 32305979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 56 - 203
Target Start/End: Original strand, 10721798 - 10721945
Alignment:
Q  56 tttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttt-tgcagttttagt 154  Q
    ||||||||| |||||||||||||||||||  ||||| ||  ||  ||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||    
T  10721798 tttttggtcctcacattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaatcgt-cctaaactatcatgttttttgcagttttagt 10721896  T
Q  155 cctacctcctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||    
T  10721897 cctacctcctattttcaactccagaaacgtagagaaatgacagttttag 10721945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 56 - 203
Target Start/End: Complemental strand, 16753104 - 16752955
Alignment:
Q  56 tttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt---gcagtttta 152  Q
    |||||||||||| ||||||||||| ||||  ||||| ||||||| ||||||||||||||| ||| ||| |||||||||||||||||||   |||||||||    
T  16753104 tttttggtcatcgcattttgaccaactcacgaaaatggttctgcctctttcaaatcgaacgaaaccat-cctaaattatcatgttttttttgcagtttta 16753006  T
Q  153 gtcctacctcctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    | |||| ||||||||||||||||||||||| |||| ||||| |||||||||    
T  16753005 gacctaactcctattttcaactccagaaacgcagaaaaatggcagttttag 16752955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 57 - 203
Target Start/End: Original strand, 28494857 - 28495003
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttt-tgcagttttagtc 155  Q
    |||||||| | ||||||||||||| |||  ||||| ||||||| |||||||||||||||||||   | |||||| ||||||||||| |||||||||||||    
T  28494857 ttttggtccttacattttgaccagttcaggaaaatggttctgcctctttcaaatcgaacaaaactgt-cctaaactatcatgttttttgcagttttagtc 28494955  T
Q  156 ctacctcctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||||||||||||||| ||||||| ||||| ||||||    
T  28494956 ctacctcctattttcaactccagaaacgcagagaagtgacaattttag 28495003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 57 - 205
Target Start/End: Complemental strand, 41834592 - 41834443
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt--gcagttttagt 154  Q
    |||||||| || ||||||||||||||||  ||||| || |||| ||||||| ||||||||||| | | |||||| ||||||||||||  |||||||||||    
T  41834592 ttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcagatcgaacaaaaccgt-cctaaactatcatgtttttttgcagttttagt 41834494  T
Q  155 cctacctcctattttcaactccagaaacacagagaaatgacagttttagac 205  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||||||||    
T  41834493 cctacctcctattttcaactcttgaaacgcagagaaatgacagttttagac 41834443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 69 - 203
Target Start/End: Original strand, 27307086 - 27307220
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttt-tgcagttttagtcctacctcctatt 167  Q
    ||||||||||| || || ||||| ||  || ||||||||||| |||||||||||| |||||| ||||||||||| ||||||||||||| |||||||||||    
T  27307086 cattttgaccaacttatgaaaatggtcatgtttctttcaaattgaacaaaatcat-cctaaactatcatgttttttgcagttttagtcttacctcctatt 27307184  T
Q  168 ttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||| || |||||||||||||||||    
T  27307185 ttcaactccagaaacgcatagaaatgacagttttag 27307220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 69 - 207
Target Start/End: Original strand, 16752607 - 16752745
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttt-tgcagttttagtcctacctcctatt 167  Q
    ||||||||||||||||  |||||  |  ||||||||||||||||||||||||| | | |||| ||| ||||||| ||||||||| ||| |||||||||||    
T  16752607 cattttgaccagctcacgaaaatgatcatgcttctttcaaatcgaacaaaatcgtccataaactat-atgttttttgcagtttttgtcatacctcctatt 16752705  T
Q  168 ttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    |||||||||| |||| || |||||||| ||||||||||||    
T  16752706 ttcaactccataaacgcaaagaaatgatagttttagacct 16752745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 70 - 203
Target Start/End: Original strand, 22651371 - 22651505
Alignment:
Q  70 attttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcctacctcc-tattt 168  Q
    |||||||||||||||   |||| ||  ||| ||||| ||||| ||||||| ||| | |||| |||||||||||||||||||||||||||||||| |||||    
T  22651371 attttgaccagctcacggaaatggtcatgcctcttttaaatcaaacaaaaccatccttaaactatcatgtttttgcagttttagtcctacctccttattt 22651470  T
Q  169 tcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||| || | ||||| |||||||||    
T  22651471 tcaactccagaaacgcacaaaaatggcagttttag 22651505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 28495291 - 28495223
Alignment:
Q  139 tttttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||    
T  28495291 tttttgcagttttagtcctacctcctattttcaactccagaaccgcagagaaatgatagttttagacct 28495223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 70 - 171
Target Start/End: Original strand, 17260352 - 17260454
Alignment:
Q  70 attttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatg-tttttgcagttttagtcctacctcctattt 168  Q
    ||||||| ||| ||| |||||| ||||||| ||||||||||||||||||||  | | |||||||||||| |||||||||||||||||||||| |||||||    
T  17260352 attttgatcagttcacaaaaatggttctgcatctttcaaatcgaacaaaattgtccataaattatcatgttttttgcagttttagtcctaccccctattt 17260451  T
Q  169 tca 171  Q
    |||    
T  17260452 tca 17260454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 69 - 204
Target Start/End: Complemental strand, 27307581 - 27307443
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt----gcagttttagtcctacctcct 164  Q
    |||||||||||| |||  ||||| ||||| | ||||||||||||||||||| | | | |||| ||| ||||||||    | |||||||||||||||||||    
T  27307581 cattttgaccagttcacgaaaatggttctccctctttcaaatcgaacaaaaccgtccataaactat-atgtttttttttgtagttttagtcctacctcct 27307483  T
Q  165 attttcaactccagaaacacagagaaatgacagttttaga 204  Q
    |||||||||||||||||  ||||||||||||| |||||||    
T  27307482 attttcaactccagaaatgcagagaaatgacatttttaga 27307443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 32305754 - 32305814
Alignment:
Q  1 tttctagaagaggcctaagaaaacggccttaatagctttaccctcatgccaaccctttttg 61  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  32305754 tttctagaagaggcctaagaaaacggtcttagtagctttaccctcatgccaaccctttttg 32305814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 57 - 201
Target Start/End: Original strand, 4966829 - 4966973
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtc 155  Q
    |||||||| || ||||||||||| ||||  ||||| || |||| ||||| ||||||||||||||| | |||||| ||| |||||||| ||||||||||||    
T  4966829 ttttggtcctcgcattttgaccaactcacgaaaatagtactgcctcttttaaatcgaacaaaatcgtccctaaactat-atgtttttagcagttttagtc 4966927  T
Q  156 ctacctcctattttcaactccagaaacacagagaaatgacagtttt 201  Q
     || | ||||||| |||||| |||||  || |||||||||||||||    
T  4966928 atatcccctatttccaactctagaaatgcacagaaatgacagtttt 4966973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 13557017 - 13557140
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttt-tgcagttttagtcctacctcctatt 167  Q
    ||||||||||||||||  ||||| ||  ||| ||||||||||| ||||||||| | | |||| ||||||||||| ||||||||||||||||| || ||||    
T  13557017 cattttgaccagctcacgaaaatggtcatgcctctttcaaatcaaacaaaatcgt-cttaaactatcatgttttttgcagttttagtcctacatcttatt 13557115  T
Q  168 ttcaactccagaaacacagagaaat 192  Q
    || |||| ||||||| |||||||||    
T  13557116 ttgaactgcagaaacgcagagaaat 13557140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 28289741 - 28289844
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgtttttgc-agttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| ||||||||||||||| | |||||||||| |||||||| | ||||||||||||| |||| ||||| ||||||||||||| || ||||||||||||    
T  28289741 tcttttaaatcgaacaaaatcgtccctaaattat-atgttttttccagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagt 28289839  T
Q  199 tttag 203  Q
    |||||    
T  28289840 tttag 28289844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 69 - 203
Target Start/End: Complemental strand, 21371217 - 21371082
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tat 166  Q
    ||||||||||| ||||||||| | || || | ||||| ||||| ||||||||| | |||||| ||| |||||||| ||| ||||||||||| |||| |||    
T  21371217 cattttgaccaactcataaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaactat-atgttttttgcaattttagtcctatctccctat 21371119  T
Q  167 tttcaactccagaaacacagagaaatgacagttttag 203  Q
    || ||||||||||||| || | |||||||||||||||    
T  21371118 ttccaactccagaaacgcacataaatgacagttttag 21371082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 164276 - 164350
Alignment:
Q  129 aattatcatgtttttgcagttttagtcctacctcctattttc-aactccagaaacacagagaaatgacagtttta 202  Q
    ||||||||| || ||||| |||| |||||||||||||||||| |||||||||||| ||||||||||||| |||||    
T  164276 aattatcattttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaatttta 164350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 14215340 - 14215402
Alignment:
Q  142 ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||| |||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  14215340 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 14215402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 18150213 - 18150109
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt--gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacag 197  Q
    ||||| ||||||||||||||||| |||||| ||| ||||||||  ||||||||||||||| |||| ||||| ||||||||||||| || | ||||||| |    
T  18150213 tcttttaaatcgaacaaaatcatccctaaactat-atgtttttttgcagttttagtcctatctccctatttccaactccagaaacgcacataaatgaccg 18150115  T
Q  198 ttttag 203  Q
    ||||||    
T  18150114 ttttag 18150109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 28290127 - 28290030
Alignment:
Q  107 aaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||| | | |||| ||| |||||||| ||||||||||||||| |||| ||||| ||||||||||||| || |||||||||||||||||    
T  28290127 aaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 28290030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 20266404 - 20266327
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcat-gtttttgcagttttagtcctacctcctattttcaactcca 177  Q
    ||||||||||||||||||||| | |||||| |||||| ||| ||| ||||||||||||||| |||||||||| |||||    
T  20266404 tctttcaaatcgaacaaaatcgtccctaaactatcatggttgttgtagttttagtcctaccccctattttcacctcca 20266327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 39083455 - 39083520
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||||| || |||| ||||| |||||||||||||||| |||||||||||||||||    
T  39083455 tttttgcagttttagtcatatctccatatttccaactccagaaacacacagaaatgacagttttag 39083520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 2864839 - 2864915
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||||| ||||| |||| ||||||||||||||||||||    
T  2864839 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 2864915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 5819014 - 5819090
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| ||| |||||||||||||||| |||||||||| ||||||||||||||||||||    
T  5819014 aattatcatttttgttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatgacagttttag 5819090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 199
Target Start/End: Original strand, 38900657 - 38900800
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatg-tttttgcagttttagtc 155  Q
    |||||||| || ||||||||||| ||||  |||||  | || | ||||| ||||||||||||||| | |||||||||| ||| |||||||||||||||||    
T  38900657 ttttggtcctcgcattttgaccaactcacgaaaatgatcctacctcttttaaatcgaacaaaatcgtccctaaattat-atgttttttgcagttttagtc 38900755  T
Q  156 ctacct-cctattttcaactccagaaacacagagaaatgacagtt 199  Q
    ||| || ||||||| |||||||| ||||  | | |||||||||||    
T  38900756 ctatctccctatttccaactccataaacgtacataaatgacagtt 38900800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 205
Target Start/End: Complemental strand, 16019027 - 16018969
Alignment:
Q  148 ttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttagac 205  Q
    |||| ||||||||||||||||| || |||||||||| ||||||||||||||||||||||    
T  16019027 ttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttagac 16018969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 205
Target Start/End: Complemental strand, 25000549 - 25000471
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttagac 205  Q
    ||||||||| ||| ||||| |||| |||| ||||||||||||||| ||||| |||| ||||||||||||||||||||||    
T  25000549 aattatcatttttgttgcatttttcgtcccacctcctattttcaaactccaaaaacgcagagaaatgacagttttagac 25000471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 29454840 - 29454901
Alignment:
Q  143 tgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    |||| |||| |||||||||||||||||||| |||||||||| ||||||||||| ||||||||    
T  29454840 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 29454901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 4967304 - 4967155
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatg---tttttgcagttttag 153  Q
    |||||||| |||||||||||||| |||| |||||| ||  | | ||||| ||||||||||||||| | |||||| ||| |||   |||||||||||||||    
T  4967304 ttttggtcctcacattttgaccaactcacaaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttttttgcagttttag 4967206  T
Q  154 tcctacct-cctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||  | |||||||  ||||| |||||| || | |||||| ||||||||    
T  4967205 tcctatatccctatttctaactctagaaacgcacataaatgatagttttag 4967155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 8419072 - 8419008
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagtttta 202  Q
    |||||||||||||||||||| |||| ||||| ||||||||||||| || |||||||||| |||||    
T  8419072 tttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaatttta 8419008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 18183055 - 18183131
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttca-actccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| ||||||||||||||||| | || |||||||| ||||||||||||||||||||    
T  18183055 aattatcatttttgttgcatttttcgtcctacctcctatttttataccccagaaacgcagagaaatgacagttttag 18183131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 196
Target Start/End: Complemental strand, 32697759 - 32697616
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgt----ttttgcagtttta 152  Q
    ||||||||||  ||||||||||| ||||  ||| | || || | ||||| |||||||||| |||| | |||||| ||| ||||    |||||||||||||    
T  32697759 ttttggtcattgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacagaatcgtccctaaactat-atgttttattttgcagtttta 32697661  T
Q  153 gtcctacct-cctattttcaactccagaaacacagagaaatgaca 196  Q
    ||  ||||| ||||||| |||||||||||||||| ||||||||||    
T  32697660 gtgatacctccctatttccaactccagaaacacacagaaatgaca 32697616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 15709415 - 15709353
Alignment:
Q  142 ttgcagttttagtcctacctcctattttc-aactccagaaacacagagaaatgacagttttag 203  Q
    ||||| |||| |||||||||||||||||| ||||||| || | ||||||||||||||||||||    
T  15709415 ttgcatttttcgtcctacctcctattttcaaactccataagcgcagagaaatgacagttttag 15709353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 24331672 - 24331722
Alignment:
Q  154 tcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||||||||    
T  24331672 tcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 24331722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 8461376 - 8461315
Alignment:
Q  143 tgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    |||| |||| ||| |||||||||||||||| |||||||||| ||||||||||||| ||||||    
T  8461376 tgcatttttcgtcatacctcctattttcaaactccagaaacgcagagaaatgacaattttag 8461315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 14340858 - 14340793
Alignment:
Q  139 tttttgcagttttagtcctacctcct-attttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||| ||||||||||||| ||||| |||| |||||||| ||||  |||||||||||||||||||    
T  14340858 tttttgtagttttagtcctatctccttatttccaactccaaaaacgtagagaaatgacagttttag 14340793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 19291452 - 19291517
Alignment:
Q  139 tttttgcagttttagtcctacctcct-attttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||||| || ||||| |||| |||||||| |||| || |||||||||||||||||    
T  19291452 tttttgcagttttagtcttatctccttatttccaactccataaacgcacagaaatgacagttttag 19291517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 138
Target Start/End: Original strand, 28595193 - 28595274
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatg 138  Q
    |||||||| ||  ||||||||||||| | |||||| ||  ||||||||||||| ||||||||||| | |||||| |||||||    
T  28595193 ttttggtcctcgtattttgaccagcttacaaaaatggtcatgcttctttcaaaacgaacaaaatcgtccctaaactatcatg 28595274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 8647898 - 8647822
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| ||| ||||| |||||||||| ||||| |||| ||||||||||||||||||||    
T  8647898 aattatcatttttgttgcatttttcgtcataccttctattttcaaactccataaacgcagagaaatgacagttttag 8647822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 19359576 - 19359520
Alignment:
Q  148 ttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    |||| |||||||||||||||||||| ||||||||||  ||||||||| |||||||||    
T  19359576 ttttcgtcctacctcctattttcaaactccagaaacgtagagaaatggcagttttag 19359520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 20260938 - 20261002
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatc 121  Q
    |||||||| |||||||||||| ||||||| ||||| || | || ||||||||||| |||||||||    
T  20260938 ttttggtcctcacattttgactagctcatgaaaatggtcccgcctctttcaaatcaaacaaaatc 20261002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 22651832 - 22651780
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatc 121  Q
    ||||||||||||||||  ||||| ||||||| | |||||||||||||||||||    
T  22651832 cattttgaccagctcacgaaaatggttctgcctttttcaaatcgaacaaaatc 22651780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 8647523 - 8647602
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||||||| ||| ||||| |||| |||||||| || |||||   ||||| |||| ||||||||||||||||||||||||    
T  8647523 aattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacct 8647602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 14465004 - 14464929
Alignment:
Q  103 tttcaaatcgaacaaaatcatacctaaattatcat-gtttttgcagttttagtcctacctcctattttcaactcca 177  Q
    |||||||||||| |||||| | |||||||||||||  |||||||||||||| || |||| | |||||||| |||||    
T  14465004 tttcaaatcgaataaaatcgtccctaaattatcatattttttgcagttttaatcataccccttattttcacctcca 14464929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 5161678 - 5161743
Alignment:
Q  139 tttttgcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||||| || || ||||||| ||||| || |||| || |||||||||||||||||    
T  5161678 tttttgcagttttagtcttatcttcctatttccaacttcaaaaacgcatagaaatgacagttttag 5161743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 6018398 - 6018455
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaactccagaaacaca 185  Q
    ||||||||| ||| |||||||||||||||||||  ||||||||| ||||| |||||||    
T  6018398 aattatcatttttgttgcagttttagtcctaccctctattttcacctccaaaaacaca 6018455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 15029842 - 15029695
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtc 155  Q
    |||||||| || ||||||||||| ||||  ||||| ||  | | | ||| ||||||||||||||| | | |||| ||| |||||||| |||||||||||     
T  15029842 ttttggtcctcccattttgaccaactcacgaaaatggtcttaccttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtt 15029744  T
Q  156 ctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    | | |||| |||||  |||||||||||| || | |||||||||||||||    
T  15029743 cgatctccctatttcaaactccagaaacgcacataaatgacagttttag 15029695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 2e-51; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 57 - 207
Target Start/End: Complemental strand, 28143562 - 28143412
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcc 156  Q
    |||||||| || ||||||||||||||||  ||||| || |||| ||||||||||||||||||||| | |||||| |||||||||||||||||||||||||    
T  28143562 ttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatgtttttgcagttttagtcc 28143463  T
Q  157 tacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  28143462 tacgtcctattttcaactccagaaacgcagagaaatgacagttttagacct 28143412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 201
Target Start/End: Complemental strand, 31797310 - 31797166
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtc 155  Q
    |||||||| |||||||||||||||||||  ||||| ||  ||| ||||||||||||||||||| | | |||||| ||| |||||||| ||||||||||||    
T  31797310 ttttggtcctcacattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactat-atgttttttgcagttttagtc 31797212  T
Q  156 ctacctcctattttcaactccagaaacacagagaaatgacagtttt 201  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||    
T  31797211 ctacctcctattttcaactctagaaacgcagagaaatgacagtttt 31797166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 57 - 207
Target Start/End: Complemental strand, 14942379 - 14942226
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt---gcagttttag 153  Q
    |||||||| || ||||||||||||||||  ||||| ||  ||  ||||||||||||||||||||  | | |||||||||||||||||   ||||||||||    
T  14942379 ttttggtcttcgcattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaattgtccataaattatcatgttttttttgcagttttag 14942280  T
Q  154 tcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    |||||| |||||||||||||||||||||  |||||||||  |||||||||||||    
T  14942279 tcctacatcctattttcaactccagaaatgcagagaaatcgcagttttagacct 14942226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 57 - 182
Target Start/End: Complemental strand, 2190609 - 2190482
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatg--tttttgcagttttagt 154  Q
    ||||||||||| ||||||||||||||||  ||| | || |||| | ||||||||||||||||||| | |||||||||||| |  ||||||||||||||||    
T  2190609 ttttggtcatcgcattttgaccagctcacgaaattggtcctgcctttttcaaatcgaacaaaatcgtccctaaattatcacgcttttttgcagttttagt 2190510  T
Q  155 cctacctcctattttcaactccagaaac 182  Q
    |||||| || | ||||| ||||| ||||    
T  2190509 cctacccccgaatttcatctccaaaaac 2190482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 33920669 - 33920772
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatg-tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| ||||||||||||||| | |||||| ||| ||| |||||||||||||||||||| |||| ||||||||||||||||||| || ||||||||||||    
T  33920669 tcttttaaatcgaacaaaatcgtccctaaactat-atgatttttgcagttttagtcctatctccctattttcaactccagaaacgcatagaaatgacagt 33920767  T
Q  199 tttag 203  Q
    |||||    
T  33920768 tttag 33920772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 57 - 203
Target Start/End: Original strand, 42192253 - 42192400
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatg-tttttgcagttttagtc 155  Q
    |||||||| |||||||||||||| ||||  ||||| || || | ||||| ||||||||||||||| | |||||| ||| ||| |||||||||||||||||    
T  42192253 ttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgcagttttagtc 42192351  T
Q  156 ctacct-cctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||| || |||||||  |||||||||||| || | |||||||||||||||    
T  42192352 ctatctccctatttctaactccagaaacgcacataaatgacagttttag 42192400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 43160066 - 43160170
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattat-catgtttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| ||||||||||||||| | |||||| ||| ||| |||||||||||||||||||| |||| ||||||||||||||||||| || | ||||||||||    
T  43160066 tcttttaaatcgaacaaaatcgtccctaaactatacatttttttgcagttttagtcctatctccctattttcaactccagaaacgcacataaatgacagt 43160165  T
Q  199 tttag 203  Q
    |||||    
T  43160166 tttag 43160170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 18450926 - 18450991
Alignment:
Q  139 tttttgcagttttagtcctacctcctattttc-aactccagaaacacagagaaatgacagttttag 203  Q
    |||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  18450926 tttttgcatttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 18450991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 4355812 - 4355915
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| ||||||||||||||| | |||||| ||| |||||||| ||||||||||||||| |||| ||||||||||||||||||| || | ||||||||||    
T  4355812 tcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgcagttttagtcctatctccctattttcaactccagaaacgcacataaatgacagt 4355910  T
Q  199 tttag 203  Q
    |||||    
T  4355911 tttag 4355915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 11540171 - 11540024
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtc 155  Q
    ||||||||||| ||||||||||| ||||  ||||| || || | ||||| ||||||||||||||| | | |||| ||| |||||||| ||||||||||||    
T  11540171 ttttggtcatcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat-atgttttttgcagttttagtc 11540073  T
Q  156 ctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
     ||  ||| ||||| ||||||||||||| || |||||||||||||||||    
T  11540072 atatatccctatttccaactccagaaacgcacagaaatgacagttttag 11540024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 15550730 - 15550834
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt--gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacag 197  Q
    ||||| ||||||||||||||| | |||||| ||| ||||||||  |||||||||||||||  ||| ||||||||||||||||||| || |||||||||||    
T  15550730 tcttttaaatcgaacaaaatcgtccctaaactat-atgtttttttgcagttttagtcctatttccctattttcaactccagaaacgcacagaaatgacag 15550828  T
Q  198 ttttag 203  Q
    ||||||    
T  15550829 ttttag 15550834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 42192776 - 42192628
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatg--tttttgcagttttagt 154  Q
    |||||||| || ||||||||||| ||||  ||||| || || | ||||| ||||||||||||||| | |||||| ||  |||  ||||||||||||||||    
T  42192776 ttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaacta-gatgtttttttgcagttttagt 42192678  T
Q  155 ccta-cctcctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    | || || ||||||| ||||||||||||| || |||||||||||||||||    
T  42192677 catatccccctatttccaactccagaaacgcacagaaatgacagttttag 42192628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 13399479 - 13399582
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| |||| |||||||||| | |||||| ||| |||||||| ||||||||||||||| |||| ||||| ||||||||||||| || ||||||||||||    
T  13399479 tcttttaaatggaacaaaatcgtccctaaactat-atgttttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagt 13399577  T
Q  199 tttag 203  Q
    |||||    
T  13399578 tttag 13399582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 43058792 - 43058717
Alignment:
Q  129 aattatcatgtttttgcagttttagtcctacctcctattttc-aactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| || ||||| |||| |||||||||||||||||| |||||||||||| |||||||||| |||||||||    
T  43058792 aattatcattttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 43058717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 9330284 - 9330180
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatg--tttttgcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacag 197  Q
    ||||| ||||||||||||||| | || ||| ||| |||  |||||||||||||||||||| || |||||||||||||  ||||||||| |||||||||||    
T  9330284 tcttttaaatcgaacaaaatcgtccccaaactat-atgtttttttgcagttttagtcctatctacctattttcaactatagaaacacatagaaatgacag 9330186  T
Q  198 ttttag 203  Q
    ||||||    
T  9330185 ttttag 9330180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 5561001 - 5560936
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||| |||| ||||| ||||||||||||| || |||||||||||||||||    
T  5561001 tttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 5560936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 4808936 - 4809039
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| ||||||||||||||| | | |||| ||| |||||||| | ||||||||||||| || ||||||| ||||||||||||| || ||||||||||||    
T  4808936 tcttttaaatcgaacaaaatcgtccataaactat-atgttttttgtagttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagt 4809034  T
Q  199 tttag 203  Q
    |||||    
T  4809035 tttag 4809039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 7446806 - 7446730
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||||| ||||| |||| ||||||||||||||||||||    
T  7446806 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 7446730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 203
Target Start/End: Complemental strand, 16953455 - 16953320
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatg-tttttgcagttttagtcctacct-cctat 166  Q
    ||||||||||| ||||| ||| | || || | ||||| |||||||||||||   | |||||| ||| ||| |||||||||||||||||||| || |||||    
T  16953455 cattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaaatgtccctaaagtat-atgttttttgcagttttagtcctatctccctat 16953357  T
Q  167 tttcaactccagaaacacagagaaatgacagttttag 203  Q
    || |||||||| |||| || |||||||||||||||||    
T  16953356 ttccaactccaaaaacgcacagaaatgacagttttag 16953320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 40815430 - 40815506
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| ||||||||||||||||| || |||||||||| ||||||||||||||||||||    
T  40815430 aattatcatttttgttgcatttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttag 40815506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 43160461 - 43160397
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagtttta 202  Q
    |||||||||||||||||||| |||| ||||| ||||||||||||| || ||||||||||||||||    
T  43160461 tttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 43160397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 43216198 - 43216095
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcctacctc-ctattttcaactccagaaacacagagaaatgacagtt 199  Q
    ||||| ||||||||||||||| | |||||| |||    |||||||||||||||||||| ||| |||||| ||||||||||||  || |||||||||| ||    
T  43216198 tcttttaaatcgaacaaaatcgtccctaaactatatattttttgcagttttagtcctatctctctatttccaactccagaaatgcacagaaatgacaatt 43216099  T
Q  200 ttag 203  Q
    ||||    
T  43216098 ttag 43216095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 69 - 203
Target Start/End: Original strand, 11539662 - 11539798
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatg--tttttgcagttttagtcctacct-ccta 165  Q
    ||||||||||| ||||  ||||| || ||  || ||| ||||||||||||||| | | |||| ||| |||  |||||||||||||||||||| || ||||    
T  11539662 cattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtccttaaactat-atgtttttttgcagttttagtcctatctcccta 11539760  T
Q  166 ttttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||| ||||||||||||| || | |||||||||||||||    
T  11539761 tttccaactccagaaacgcacataaatgacagttttag 11539798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 16175839 - 16175735
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatg--tttttgcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacag 197  Q
    ||||| ||||||||||||||| | | |||| ||| |||  |||||||||||||||||||| || ||||||| ||||||||||||| || | |||||||||    
T  16175839 tcttttaaatcgaacaaaatcgtccttaaactat-atgtttttttgcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacag 16175741  T
Q  198 ttttag 203  Q
    ||||||    
T  16175740 ttttag 16175735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 203
Target Start/End: Original strand, 44219707 - 44219804
Alignment:
Q  107 aaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||  | | |||||||| |||||||| ||||||||||||||| |||| | ||| ||||||||||||| || |||||||||||||||||    
T  44219707 aaatcgaacaaaattgtccttaaattat-atgttttttgcagttttagtcctatctccctgtttccaactccagaaacgcacagaaatgacagttttag 44219804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 3025909 - 3025848
Alignment:
Q  142 ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagtttta 202  Q
    ||||| |||| |||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  3025909 ttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 3025848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 6949547 - 6949612
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||| |||| ||||| |||||||| |||| || |||||||||||||||||    
T  6949547 tttttgcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttag 6949612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 8425453 - 8425514
Alignment:
Q  142 ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagtttta 202  Q
    ||||| |||| |||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  8425453 ttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 8425514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 33921062 - 33920997
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||| |||| ||||| |||||| |||||| || |||||||||||||||||    
T  33921062 tttttgcagttttagtcctatctccctatttccaactctagaaacgcacagaaatgacagttttag 33920997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 202
Target Start/End: Original strand, 38008007 - 38008110
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt--gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacag 197  Q
    ||||| ||||||||||||||| | |||||| ||| ||||||||  |||||||||||| || |||| ||||| |||||||| |||| || |||||||||||    
T  38008007 tcttttaaatcgaacaaaatcgtccctaaactat-atgtttttttgcagttttagtcatatctccctatttccaactccaaaaacgcacagaaatgacag 38008105  T
Q  198 tttta 202  Q
    |||||    
T  38008106 tttta 38008110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 69 - 203
Target Start/End: Original strand, 62982 - 63117
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tat 166  Q
    ||||||||||| ||||  ||||| || || | | ||| ||||||||||||||| | | |||| ||| |||||||| ||||||||||||||| |||| |||    
T  62982 cattttgaccaactcacgaaaatggtcctacctttttaaaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcctatctccctat 63080  T
Q  167 tttcaactccagaaacacagagaaatgacagttttag 203  Q
    || |||||| |||||| || | |||||||||||||||    
T  63081 ttccaactcaagaaacgcacataaatgacagttttag 63117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 22374785 - 22374709
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttc-aactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||| ||||| |||||  ||||||||||||||||||||    
T  22374785 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactctagaaatgcagagaaatgacagttttag 22374709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 26538539 - 26538459
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttagacct 207  Q
    ||||||||| ||| ||||| |||| |||||||| || |||||||| | |||||||| ||||||||||||||||||||||||    
T  26538539 aattatcatttttgttgcatttttcgtcctaccccccattttcaaaccccagaaacgcagagaaatgacagttttagacct 26538459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 203
Target Start/End: Original strand, 32418221 - 32418317
Alignment:
Q  108 aatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcctacctcct-attttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||| | |||||| |||    ||||||||||||||||| || ||||| |||| ||||||||||||| || |||||||||| ||||||    
T  32418221 aatcgaacaaaatcgtccctaaactatatattttttgcagttttagtcatatctccttatttccaactccagaaacgcacagaaatgacatttttag 32418317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 1978569 - 1978494
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttc-aactccagaaacacagagaaatgacagtttta 202  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||| ||||| ||||||||| ||||||| ||||||||    
T  1978569 aattatcatttttgttgcattttttgtcctacctcctattttcaaactctagaaacacaaagaaatggcagtttta 1978494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 14432575 - 14432525
Alignment:
Q  154 tcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||||||| ||| |||||| ||||||||||||||||||||    
T  14432575 tcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 14432525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 63409 - 63344
Alignment:
Q  139 tttttgcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||| || ||||||| |||||| |||||| || | |||||||||||||||    
T  63409 tttttgcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttag 63344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 20128188 - 20128123
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||| ||||||||||| |||| ||||| ||||||||||||| || | |||||||||||||||    
T  20128188 tttttgcaattttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttag 20128123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 22445735 - 22445800
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||| |||||||||| ||| |||| ||||||||||| |||||||||| | |||||||||||||||    
T  22445735 tttttacagttttagtactatctccctattttcaacttcagaaacacacataaatgacagttttag 22445800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 239792 - 239736
Alignment:
Q  148 ttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    |||| ||| |||||||||||||||| |||||||||| |||||||||| |||||||||    
T  239792 ttttcgtcatacctcctattttcaaactccagaaacgcagagaaatggcagttttag 239736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 13399871 - 13399807
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagtttta 202  Q
    ||||||||||||||||| || |||| ||||| |||||||| |||| || ||||||||||||||||    
T  13399871 tttttgcagttttagtcatatctccctatttccaactccataaacgcatagaaatgacagtttta 13399807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 28617074 - 28616998
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| ||| |||||||||||||||| |||||||||| |||||||||  |||||||||    
T  28617074 aattatcatttttgttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatagcagttttag 28616998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 40027600 - 40027524
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttc-aactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||| ||||||| |||| ||| |||||| |||||||||    
T  40027600 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactccataaacgcagtgaaatggcagttttag 40027524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 43215805 - 43215869
Alignment:
Q  140 ttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||| || |||| |||||||||||||| ||||  | |||||||||||||||||    
T  43215805 ttttgcagttttagtcatatctccctattttcaactccaaaaacgaatagaaatgacagttttag 43215869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 239437 - 239516
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||||||| ||| ||||| |||| |||||||| || |||||   ||||| |||| ||||||||||||||||||||||||    
T  239437 aattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacct 239516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 11090606 - 11090685
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||||||| ||| ||||| |||| |||||||| || |||||   ||||| |||| ||||||||||||||||||||||||    
T  11090606 aattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacct 11090685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 25336121 - 25336034
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattat-catgtttttgcagttttagtc 155  Q
    ||||||||||| ||||  ||| | || || ||||||| ||||||||||||||| | ||||||||||  || |||||||||||||||||    
T  25336121 cattttgaccaactcacgaaattggtcctacttcttttaaatcgaacaaaatcgtccctaaattatatatttttttgcagttttagtc 25336034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 26538182 - 26538261
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||||||| ||| ||||| |||| |||||||| || |||||   ||||| |||||||||||||| ||||||||||||||    
T  26538182 aattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaataacagttttagacct 26538261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 40815805 - 40815726
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||||||| ||| ||||| |||| |||||||| || |||||   ||||| |||| ||||||||||||||||||||||||    
T  40815805 aattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacct 40815726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 4356239 - 4356142
Alignment:
Q  107 aaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||| | | |||| ||| |||||||| ||||||||| | |||  ||| ||||| ||||||||||||| || |||||||||||||||||    
T  4356239 aaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttaattctatttccctatttccaactccagaaacgcacagaaatgacagttttag 4356142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 13315591 - 13315657
Alignment:
Q  139 tttttgcagttttagtcctacct-cctattttcaactccag-aaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||| || ||||||| ||||||||| |||  || |||||||||||||||||    
T  13315591 tttttgcagttttagtcctatctccctatttccaactccagaaaatgcacagaaatgacagttttag 13315657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 38008434 - 38008337
Alignment:
Q  107 aaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||| | | |||| ||| |||||||| ||||||||||||||| || ||||||| |||||||| |||| || | |||||| ||||||||    
T  38008434 aaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcctatctccctatttccaactccataaacgcacataaatgatagttttag 38008337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 207
Target Start/End: Original strand, 14432241 - 14432306
Alignment:
Q  142 ttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||| |||| |||||||| || |||||   ||||| |||| ||||||||||||||||||||||||    
T  14432241 ttgcatttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacct 14432306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 15551125 - 15551060
Alignment:
Q  139 tttttgcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||| || ||||||| ||||||||||||| || | |||| | ||||||||    
T  15551125 tttttgcagttttagtcctatctccctatttccaactccagaaacgcacataaataatagttttag 15551060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 16953032 - 16953097
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||| ||||||||| || |||| ||||| |||||| |||||| || |||||||||||||||||    
T  16953032 tttttgcggttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttag 16953097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 17061003 - 17061068
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||| ||||||||| || |||| ||||| |||||| |||||| || |||||||||||||||||    
T  17061003 tttttgcggttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttag 17061068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 20127832 - 20127897
Alignment:
Q  139 tttttgcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||| || ||||||| |||| |||||||| || | |||||||| ||||||    
T  20127832 tttttgcagttttagtcctatctccctatttccaaccccagaaacgcacaaaaatgacaattttag 20127897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 195
Target Start/End: Original strand, 649584 - 649679
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatg-tttttgcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgac 195  Q
    ||||| ||||||||||||||| | |||||| ||| ||| |||||||||||||||| ||  || ||||||| ||||||||||||| || | |||||||    
T  649584 tcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgcagttttagttctgtctccctatttccaactccagaaacgcacataaatgac 649679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 11090960 - 11090904
Alignment:
Q  148 ttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    |||| |||||| ||||||||||||| |||||||||| |||| |||||||| ||||||    
T  11090960 ttttcgtcctatctcctattttcaaactccagaaacgcagataaatgacaattttag 11090904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 2e-42; HSPs: 84)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 57 - 207
Target Start/End: Complemental strand, 36701629 - 36701478
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtc 155  Q
    |||||||| || ||||||||||||||||  ||||| ||  ||  ||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||    
T  36701629 ttttggtcctcgcattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaatcatccctaaactatcatgttttttgcagttttagtc 36701530  T
Q  156 ctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
     ||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  36701529 atacctcctattttcaactccagaaacacatagaaatggcagttttagacct 36701478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 56 - 203
Target Start/End: Original strand, 2323391 - 2323538
Alignment:
Q  56 tttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagt 154  Q
    ||||| ||| || |||||||||||| ||| ||||||| | |||| ||||||||||||||||||| ||| |||||| |||||||||||| ||| |||||||    
T  2323391 ttttttgtcctcgcattttgaccagttcacaaaaattatactgcctctttcaaatcgaacaaaaccat-cctaaactatcatgttttttgcaattttagt 2323489  T
Q  155 cctacctcctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||    
T  2323490 cctacctcctattttcaactccagaaacacggataaatgacagttttag 2323538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 69 - 207
Target Start/End: Complemental strand, 27200212 - 27200074
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcctatt 167  Q
    ||||||||||||||||  ||||| ||||||| ||||||||||||||||| | | | |||||| |||||||||||| |||||||||||| |||||||||||    
T  27200212 cattttgaccagctcacgaaaatggttctgcctctttcaaatcgaacaataccgt-cctaaactatcatgttttttgcagttttagtcatacctcctatt 27200114  T
Q  168 ttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  27200113 ttcaactccagaaacgcagagaaatgacaggtttagacct 27200074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 57 - 203
Target Start/End: Original strand, 50900545 - 50900692
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt--gcagttttagt 154  Q
    |||||||| ||| ||||||| |||||||  ||||| || ||   ||||||||||||||||||| | | |||||| ||||||||||||  |||||||||||    
T  50900545 ttttggtcttcaaattttgatcagctcacgaaaatggtcctaactctttcaaatcgaacaaaaccgt-cctaaactatcatgttttttcgcagttttagt 50900643  T
Q  155 cctacctcctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||| ||||||||||||| ||||||| |||||||||||||||||||    
T  50900644 cctaccttctattttcaactctagaaacatagagaaatgacagttttag 50900692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 101 - 205
Target Start/End: Complemental strand, 37847308 - 37847204
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttt 200  Q
    ||||||||||||||||||  | | |||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||  ||||||||||||| |||    
T  37847308 tctttcaaatcgaacaaagccgtccctaaactatcatgtttttgcagttttagtcctatctcctattttcaacttcagaaatgcagagaaatgacaattt 37847209  T
Q  201 tagac 205  Q
    |||||    
T  37847208 tagac 37847204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 69 - 207
Target Start/End: Original strand, 55192143 - 55192281
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatg-tttttgcagttttagtcctacctcctatt 167  Q
    ||||||||||||||||  ||||| ||   || ||||||||||| ||||||| | | | |||| ||| ||| |||||| ||||||||||||||||||||||    
T  55192143 cattttgaccagctcacgaaaatggtctcgcctctttcaaatcaaacaaaaccgtccataaactat-atgttttttgtagttttagtcctacctcctatt 55192241  T
Q  168 ttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  55192242 ttcaactccagaaacgcagagaaatgacagttttagacct 55192281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 57 - 204
Target Start/End: Complemental strand, 50901060 - 50900913
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtc 155  Q
    |||||||| || |||||||||||||||| |||||| |  |||| |||| |||||||||||||| | | |||||| ||| |||||||| |||||||| |||    
T  50901060 ttttggtcctcgcattttgaccagctcacaaaaatggccctgcctcttacaaatcgaacaaaaccgtccctaaactat-atgttttttgcagtttttgtc 50900962  T
Q  156 ctacctcctattttcaactccagaaacacagagaaatgacagttttaga 204  Q
    |||||||||||||||||||||| |||| || ||||||  ||||||||||    
T  50900961 ctacctcctattttcaactccataaacgcaaagaaattgcagttttaga 50900913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 71 - 205
Target Start/End: Complemental strand, 8874205 - 8874070
Alignment:
Q  71 ttttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatg---tttttgcagttttagtcctacctcctatt 167  Q
    ||||||||||||||  ||||| || |||||||||| ||||||||||||| | | |||||| ||| |||   |||||||||||||||| |||||| |||||    
T  8874205 ttttgaccagctcacgaaaatggtcctgcttcttttaaatcgaacaaaaccttccctaaactat-atgttttttttgcagttttagttctaccttctatt 8874107  T
Q  168 ttcaactccagaaacacagagaaatgacagttttagac 205  Q
    ||||||||||||||| || |||||||||||||||||||    
T  8874106 ttcaactccagaaacgca-agaaatgacagttttagac 8874070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 57 - 207
Target Start/End: Original strand, 49407809 - 49407959
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttt-tgcagttttagtc 155  Q
    |||||||| || ||||||||||||||||  ||||| ||  ||| |||||||||| |||||||| | | |||||| | | ||||||| | |||||||||||    
T  49407809 ttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaaccgtccctaaacttt-atgttttgtacagttttagtc 49407907  T
Q  156 ctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
     ||||||||||||||||||||| |||| ||||||||||||| ||||||||||    
T  49407908 atacctcctattttcaactccaaaaacgcagagaaatgacaattttagacct 49407959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 69 - 207
Target Start/End: Original strand, 37075711 - 37075852
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttt----tgcagttttagtcctacctcct 164  Q
    ||||||||||| ||||  ||||| || |||| ||||||||||| ||||||  | | |||||| ||| |||||||    |||||||||||||||||||| |    
T  37075711 cattttgaccaactcacgaaaatggtcctgcctctttcaaatcaaacaaacccgtccctaaactat-atgtttttttttgcagttttagtcctacctctt 37075809  T
Q  165 attttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    |||||||||||||||||| |||||||||||| |||||||||||    
T  37075810 attttcaactccagaaacgcagagaaatgaccgttttagacct 37075852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 52237350 - 52237203
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatg-tttttgcagttttagtc 155  Q
    |||||||| |||||||||||||| ||||  ||||| || || | ||||| ||||||||||||||| | |||||||||| ||| |||||||||||||||||    
T  52237350 ttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaattat-atgttttttgcagttttagtc 52237252  T
Q  156 ctacct-cctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||| || |||||||  |||||| ||||| || |||||||||||||||||    
T  52237251 ctatctccctatttctaactccggaaacgcacagaaatgacagttttag 52237203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 56 - 207
Target Start/End: Original strand, 27199714 - 27199866
Alignment:
Q  56 tttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatg--tttttgcagttttag 153  Q
    ||||||||| || ||||||||||||||||  ||||| ||  ||| ||||||||||||||||||| | |  ||||| ||| |||  |||||||||||||||    
T  27199714 tttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtcactaaactat-atgtttttttgcagttttag 27199812  T
Q  154 tcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    | |||| ||||||||||||||| |||||| |||| ||||  |||||||||||||    
T  27199813 tgctacatcctattttcaactctagaaacgcagataaatatcagttttagacct 27199866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 69 - 207
Target Start/End: Complemental strand, 49408302 - 49408165
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt--gcagttttagtcctacctcctat 166  Q
    ||||||||||| ||||  ||||| ||| ||  |||||||||||||||||||   | |||||| ||||||||||||  |||||||||||||||||||  ||    
T  49408302 cattttgaccatctcacgaaaatggttgtgtctctttcaaatcgaacaaaactgt-cctaaactatcatgtttttttgcagttttagtcctacctc--at 49408206  T
Q  167 tttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    |||||||||||||||| || ||||||| |||||||||||||    
T  49408205 tttcaactccagaaacgcaaagaaatggcagttttagacct 49408165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 56 - 203
Target Start/End: Original strand, 43222402 - 43222550
Alignment:
Q  56 tttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatg-tttttgcagttttagt 154  Q
    |||||||||||||||||||||||| ||||  ||||| ||| ||  ||||| ||||||||||||||| | |||||| ||| ||| |||||||| ||||| |    
T  43222402 tttttggtcatcacattttgaccaactcacgaaaatagttatgtctcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgcatttttaat 43222500  T
Q  155 cctacctccta-ttttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||| |||| |||||||||||||||||  | | |||||||||||||||    
T  43222501 cctaccccctatttttcaactccagaaacgtacaaaaatgacagttttag 43222550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 8873786 - 8873850
Alignment:
Q  139 tttttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||    
T  8873786 tttttgcagttttagtcttacctcctattttcaacttcagaaacgcagagaaatgacagttttag 8873850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 57 - 203
Target Start/End: Original strand, 25534903 - 25535051
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacc-taaattatcatgttttt-gcagttttagt 154  Q
    |||||||| || |||||||||||  |||| ||||| || || | ||||| ||||||||||||||| | || |||||||| |||||||| |||||||||||    
T  25534903 ttttggtcctcgcattttgaccaattcatgaaaatggtcctacctcttttaaatcgaacaaaatcgtcccctaaattat-atgttttttgcagttttagt 25535001  T
Q  155 cctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||| |||| ||||| ||||||||||||| || | |||||||||||||||    
T  25535002 cctatctccctatttccaactccagaaacgcacaaaaatgacagttttag 25535051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 40839185 - 40839038
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtc 155  Q
    |||||||| |||||||||||| | ||||  ||||| ||  | | ||||| ||||||||||||||| | |||||| ||| |||||||| ||||||||||||    
T  40839185 ttttggtcctcacattttgacaaactcacgaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgcagttttagtc 40839087  T
Q  156 ctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||| |||| |||||  |||||||||||| || |||||||||||||||||    
T  40839086 ctatctccctatttctaactccagaaacgcacagaaatgacagttttag 40839038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 52236873 - 52236976
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtccta-cctcctattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| ||||||||||||||| | |||||| ||| |||||||| |||||||||||| || || ||||||||||||||||||||| || ||||||||||||    
T  52236873 tcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgcagttttagtcatatccccctattttcaactccagaaacgcacagaaatgacagt 52236971  T
Q  199 tttag 203  Q
    |||||    
T  52236972 tttag 52236976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 101 - 207
Target Start/End: Original strand, 36701163 - 36701272
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgtttttg---cagttttagtcctacctcctattttcaactccagaaacacagagaaatgacag 197  Q
    ||||||||||||||||||||| | | |||| ||||||||||||    | ||||||||  | |||||||||||||||||||||||| |||| ||||||||     
T  36701163 tctttcaaatcgaacaaaatcgtccataaactatcatgttttttttacggttttagttatccctcctattttcaactccagaaacgcagataaatgacaa 36701262  T
Q  198 ttttagacct 207  Q
    ||||||||||    
T  36701263 ttttagacct 36701272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 57 - 203
Target Start/End: Original strand, 40275106 - 40275255
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaatt--atcatgtttttgcagttttagt 154  Q
    |||||||| |||||||||||||| ||||  ||||| || || | ||||| ||||||||||||||  | |||||| |  ||  | ||||||||||||||||    
T  40275106 ttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaattgtccctaaactctatgttttttttgcagttttagt 40275205  T
Q  155 cctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||| |||| |||||  |||||||||||| || |||||||||||||||||    
T  40275206 cctatctccatatttctaactccagaaacgcacagaaatgacagttttag 40275255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 50662895 - 50662798
Alignment:
Q  107 aaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||| | | |||| ||| |||||||| ||||||||||||||| |||| ||||||||||||||||||| || |||||||||||||||||    
T  50662895 aaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcctagctccctattttcaactccagaaacgcacagaaatgacagttttag 50662798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 56 - 203
Target Start/End: Complemental strand, 37076208 - 37076060
Alignment:
Q  56 tttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatg-tttttgcagttttagt 154  Q
    ||||||||| || |||||||| |||||||  ||||| || | || ||||||||||||||||||||| | |||||| ||||||| ||||| || |||||||    
T  37076208 tttttggtcctcgcattttgatcagctcacgaaaatggtcccgcctctttcaaatcgaacaaaatcgt-cctaaactatcatgttttttacatttttagt 37076110  T
Q  155 cctacctccta-ttttcaactccagaaacacagagaaatgacagttttag 203  Q
    | ||||| ||| |||| ||||| ||||||  ||||||||| |||||||||    
T  37076109 cttaccttctattttttaactctagaaacgtagagaaatggcagttttag 37076060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 5137441 - 5137365
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| ||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||    
T  5137441 aattatcatttttgttgcatttttagtcctatctcctattttcaaactccagaaacgcagagaaatgacagttttag 5137365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 26837445 - 26837521
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  26837445 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 26837521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 33412457 - 33412389
Alignment:
Q  139 tttttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    |||||||||||||||||||||||||||||||||  |  |||||| ||||||||||| ||||||||||||    
T  33412457 tttttgcagttttagtcctacctcctattttcatttttagaaacgcagagaaatgatagttttagacct 33412389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 37727390 - 37727314
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  37727390 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 37727314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 51828014 - 51828117
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| ||||||||||||||| | |||||| ||| |||||||| ||| ||||||||||| |||| ||||||||||||||||||| || | ||||||||||    
T  51828014 tcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgcatttttagtcctatctccctattttcaactccagaaacgcacataaatgacagt 51828112  T
Q  199 tttag 203  Q
    |||||    
T  51828113 tttag 51828117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 57 - 203
Target Start/End: Original strand, 55389618 - 55389765
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtc 155  Q
    |||||||| || ||||| ||||| ||||  ||||| || || | | ||| ||||||||||||||| | | |||| ||| |||||||| ||||||||||||    
T  55389618 ttttggtcctcccatttcgaccaactcacgaaaatggtcctaccttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtc 55389716  T
Q  156 ctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||| |||| ||||| ||||||||||||| || |||||||||||||||||    
T  55389717 ctatctccctatttccaactccagaaacgcacagaaatgacagttttag 55389765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 31778752 - 31778814
Alignment:
Q  142 ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||| |||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  31778752 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 31778814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 43222923 - 43222775
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaa--ttatcatgtttttgcagttttagt 154  Q
    |||||||| || ||||||||| ||| ||  ||||| ||  ||| ||||| ||||||||||||||| | ||||||  ||||  | ||||||||||||||||    
T  43222923 ttttggtcctcgcattttgacaagcgcacgaaaatggtcatgcctcttttaaatcgaacaaaatcgtccctaaactttat-gtttttttgcagttttagt 43222825  T
Q  155 cctacctccta-ttttcaactccagaaacacagagaaatgacagttttag 203  Q
    || ||| |||| ||||||||||||||||| || | |||||||||||||||    
T  43222824 cccaccccctatttttcaactccagaaacgcacaaaaatgacagttttag 43222775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 51828408 - 51828343
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||| |||| ||||| ||||||||||||| || |||||||||||||||||    
T  51828408 tttttgcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagttttag 51828343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 22424899 - 22424975
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||||| |||||||||  ||||||||||||||||||||    
T  22424899 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttag 22424975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 24300641 - 24300717
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  24300641 aattatcatttttgttgcaattttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacagttttag 24300717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 32535044 - 32535120
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||||| ||| |||| ||||||||||||||||||||||    
T  32535044 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactctagaatcacagagaaatgacagttttag 32535120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 39555663 - 39555739
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| || ||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  39555663 aattatcatttttgttgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 39555739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 40275626 - 40275480
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtc 155  Q
    |||||||| |||||||||||||| ||||  ||| | || || | ||||| ||||||||||||||| |  ||||| ||| |||||||| ||||||||||||    
T  40275626 ttttggtcctcacattttgaccaactcacgaaa-tggtcctacctcttttaaatcgaacaaaatcgtctctaaactat-atgttttttgcagttttagtc 40275529  T
Q  156 cta-cctcctattttcaactccagaaacacagagaaatgacagttttag 203  Q
     || || ||||||| ||||||||||||| || | |||||||||||||||    
T  40275528 atatccccctatttccaactccagaaacgcacaaaaatgacagttttag 40275480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 41047159 - 41047083
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||||| |||||||||| |||||||||| |||||||||    
T  41047159 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 41047083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 43973900 - 43973824
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttca-actccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| ||||||||||||||||||| || |||||||| ||||||||||||||||||||    
T  43973900 aattatcatttttgttgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 43973824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 46013479 - 46013582
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| ||||||||||||||| | |||||| ||| |||||||| |||||||||||| || |||| ||||||||||||||||||| || | ||||||| ||    
T  46013479 tcttttaaatcgaacaaaatcgtccctaaagtat-atgttttttgcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacggt 46013577  T
Q  199 tttag 203  Q
    |||||    
T  46013578 tttag 46013582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 203
Target Start/End: Original strand, 51472880 - 51473015
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tat 166  Q
    ||||||||||| ||||| ||| || | || | ||||| ||||| ||||||||  | |||||| ||| |||||||| ||||||||||||||| |||| |||    
T  51472880 cattttgaccaactcatgaaatttttcctacctcttttaaatcaaacaaaattgtccctaaagtat-atgttttttgcagttttagtcctatctccctat 51472978  T
Q  167 tttcaactccagaaacacagagaaatgacagttttag 203  Q
    || |||||||| |||| || |||||||||||||||||    
T  51472979 ttccaactccataaacgcacagaaatgacagttttag 51473015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 52375864 - 52375717
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtc 155  Q
    |||||||| || ||||||||||| ||||  ||||| || || | ||||| |||| |||||||||| | | |||| ||| |||||||| ||||||||||||    
T  52375864 ttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaattgaacaaaatcgtccataaactat-atgttttttgcagttttagtc 52375766  T
Q  156 ctac-ctcctattttcaactccagaaacacagagaaatgacagttttag 203  Q
     ||  | ||||||| ||||||||||||| || |||||||||||||||||    
T  52375765 atattcccctatttccaactccagaaacgcacagaaatgacagttttag 52375717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 49720428 - 49720531
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagtt 199  Q
    ||||| ||||||||||||||| | |||||| |||    |||||||||||||||||||| |||| |||||  |||||||||||| || | |||||||||||    
T  49720428 tcttttaaatcgaacaaaatcgtccctaaagtatacgttttttgcagttttagtcctatctccttatttctaactccagaaacgcacataaatgacagtt 49720527  T
Q  200 ttag 203  Q
    ||||    
T  49720528 ttag 49720531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 202
Target Start/End: Complemental strand, 330368 - 330223
Alignment:
Q  58 tttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcc 156  Q
    ||||||| || ||||||||||| ||||  ||||| || || | | ||| ||||| ||||||||| | |||||| ||| |||||||| ||||||||||||     
T  330368 tttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccctaaactat-atgttttttgcagttttagtca 330270  T
Q  157 tacctcc-tattttcaactccagaaacacagagaaatgacagtttta 202  Q
    || |||| ||||| |||||| |||||| || ||||||||||||||||    
T  330269 tatctccctatttccaactctagaaacgcacagaaatgacagtttta 330223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 205
Target Start/End: Complemental strand, 29801876 - 29801798
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttagac 205  Q
    ||||||||| ||| ||||| |||| |||| ||||||||||||||| |||||||||| ||||||||||||| ||||||||    
T  29801876 aattatcatttttgttgcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttagac 29801798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 44676955 - 44676858
Alignment:
Q  107 aaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctc-ctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||| | | |||| ||| |||||||| ||| ||||||||||| ||| |||||||||||||||||||| || | |||||||||||||||    
T  44676955 aaatcgaacaaaatcgtccttaaactat-atgttttttgcaattttagtcctatctctctattttcaactccagaaacgcacataaatgacagttttag 44676858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 69 - 203
Target Start/End: Complemental strand, 46013944 - 46013808
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatg--tttttgcagttttagtcctacct-ccta 165  Q
    ||||||||||| |||  |||||| |||||   | ||| ||||||||||||||| | | |||| ||| |||  |||||||||||||||||||| || ||||    
T  46013944 cattttgaccaactcccaaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttttgcagttttagtcctatctcccta 46013846  T
Q  166 ttttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||| ||||||||||||| || | |||||||||||||||    
T  46013845 tttccaactccagaaacgcacataaatgacagttttag 46013808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 51828596 - 51828700
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatg--tttttgcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacag 197  Q
    ||||| ||||||||||||||| | | |||| ||| |||  |||||||||||||||||||| || ||||||| ||||||||||||| || | |||||||||    
T  51828596 tcttttaaatcgaacaaaatcgtccgtaaactat-atgtttttttgcagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacag 51828694  T
Q  198 ttttag 203  Q
    ||||||    
T  51828695 ttttag 51828700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 14654642 - 14654577
Alignment:
Q  139 tttttgcagttttagtcctacctcct-attttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||| ||||| |||| ||||||||||||| || | |||||||||||||||    
T  14654642 tttttgcagttttagtcctatctccttatttccaactccagaaacgcacataaatgacagttttag 14654577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 40838747 - 40838812
Alignment:
Q  139 tttttgcagttttagtccta-cctcctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||||| || || ||||||| ||||||||||||| || |||||||||||||||||    
T  40838747 tttttgcagttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagttttag 40838812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 47431792 - 47431857
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||| |||| |||||  |||||||||||| || |||||||||||||||||    
T  47431792 tttttgcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttag 47431857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 49951997 - 49951932
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||||| || |||| ||||||||||||||||||| || | |||||||||||||||    
T  49951997 tttttgcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacagttttag 49951932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 55390048 - 55389983
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||| |||||||||||||||||| ||||| |||||||| |||| || |||||||||||||||||    
T  55390048 tttttgtagttttagtcctacctccctatttccaactccataaacgcacagaaatgacagttttag 55389983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 4275824 - 4275748
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttc-aactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||| ||||||| |||| |||||||||| |||||||||    
T  4275824 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 4275748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 17464576 - 17464652
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttc-aactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||| ||||||||||||  | |||||||||||||||||    
T  17464576 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgtaaagaaatgacagttttag 17464652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 20841021 - 20840945
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttc-aactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||| ||||||| |||| |||||||||| |||||||||    
T  20841021 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 20840945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 25853319 - 25853395
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| || ||||||||||||||||| |||||||||| ||||||||| ||||||||||    
T  25853319 aattatcatttttgttgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaataacagttttag 25853395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 27393746 - 27393822
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||| ||||||||||| | |||||||| ||||||||||||||||||||    
T  27393746 aattatcatttttgttgcatttttcgtcctaccccctattttcaaaccccagaaacgcagagaaatgacagttttag 27393822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 30098223 - 30098147
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttc-aactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||| |||| ||||||| |||||| |||||||||||||    
T  30098223 aattatcatttttgttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagatatgacagttttag 30098147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 34105139 - 34105034
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt---gcagttttagtcctacctcct-attttcaactccagaaacacagagaaatgaca 196  Q
    ||||| ||||||||||||||| | |||||| ||| ||||||||   ||||||||||||| | ||||| |||| ||||| ||||||| || ||||||||||    
T  34105139 tcttttaaatcgaacaaaatcgtccctaaactat-atgttttttttgcagttttagtcccatctccttatttccaacttcagaaacgcacagaaatgaca 34105041  T
Q  197 gttttag 203  Q
    |||||||    
T  34105040 gttttag 34105034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 38535784 - 38535681
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| |||||||| |||||| | |||||| ||| |||||||| ||||||||||||||| |||| ||||| ||||||||||||| || | |||| |||||    
T  38535784 tcttttaaatcgaataaaatcgtccctaaactat-atgttttttgcagttttagtcctatctccctatttccaactccagaaacgcacataaattacagt 38535686  T
Q  199 tttag 203  Q
    |||||    
T  38535685 tttag 38535681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 44676529 - 44676632
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| ||||||||||||| | | |||||| ||| |||||||| |||| |||||||||| |||| ||||| |||||| |||||| || ||||||||||||    
T  44676529 tcttttaaatcgaacaaaaccgtccctaaactat-atgttttttgcagctttagtcctatctccctatttccaactcaagaaacgcacagaaatgacagt 44676627  T
Q  199 tttag 203  Q
    |||||    
T  44676628 tttag 44676632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 52375384 - 52375487
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| |||| |||||||||| | |||||| ||| |||||||| ||||||||||| ||| |||| |||||  |||||||||||| || ||||||||||||    
T  52375384 tcttttaaattgaacaaaatcgtccctaaactat-atgttttttgcagttttagttctatctccctatttctaactccagaaacgcatagaaatgacagt 52375482  T
Q  199 tttag 203  Q
    |||||    
T  52375483 tttag 52375487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 57 - 203
Target Start/End: Original strand, 22370609 - 22370757
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttt--tgcagttttagt 154  Q
    |||||||| || ||||||||||| ||||  ||||| || || | | ||| ||| | ||||||||| | |||||| ||| |||||||  ||||||||||||    
T  22370609 ttttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaaccaaacaaaatcgtccctaaactat-atgtttttttgcagttttagt 22370707  T
Q  155 cctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||| |||| ||| | ||||||||||||| || |||||| ||||||||||    
T  22370708 cctatctccttatctccaactccagaaacgcacagaaataacagttttag 22370757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 32730840 - 32730775
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||| ||||| |||| |||||  |||||||||||| || |||||||||||||||||    
T  32730840 tttttgcagttttaatcctatctccctatttcaaactccagaaacgcacagaaatgacagttttag 32730775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 51473306 - 51473241
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||| |||| ||||| |||||||| |||| || | |||||||||||||||    
T  51473306 tttttgcagttttagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttag 51473241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 203
Target Start/End: Original strand, 2044296 - 2044431
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatg-tttttgcagttttagtcctacct-cctat 166  Q
    ||||||||||| ||||| ||||| ||  | | ||||| ||||||||||||||| | | |||||||| ||| |||||| |||||||||| || || |||||    
T  2044296 cattttgaccaactcatgaaaatggtcatacctcttttaaatcgaacaaaatcgtccataaattat-atgttttttggagttttagtcatatctccctat 2044394  T
Q  167 tttcaactccagaaacacagagaaatgacagttttag 203  Q
    || |||||| |||||| || | |||| ||||||||||    
T  2044395 ttccaactcaagaaacgcacataaataacagttttag 2044431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 12140994 - 12141076
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgtttttg--cagttttagtcctacctcctattttcaactccagaaac 182  Q
    |||||||||||||| |||| | | |||||| ||||||||||||   |||||||||||||||| |||||||||| ||||| ||||    
T  12140994 tctttcaaatcgaagaaaa-cgtccctaaactatcatgttttttttcagttttagtcctaccccctattttcacctccaaaaac 12141076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 23644925 - 23644849
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| ||||  ||||||||||||||||||| ||| || ||| ||||||||||||||||||||    
T  23644925 aattatcatttttgttgcatttttcatcctacctcctattttcaaactctagtaacgcagagaaatgacagttttag 23644849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 26274652 - 26274728
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| ||| |||||||||||||||| |||||||||| |||  |||||||||||||||    
T  26274652 aattatcatttttgttgcatttttcgtcatacctcctattttcaaactccagaaacgcagttaaatgacagttttag 26274728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 34104733 - 34104797
Alignment:
Q  139 tttttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||||| || ||||||||| || |||||||||| || | |||||||| ||||||    
T  34104733 tttttgcagttttagtcatatctcctatttccagctccagaaacgcacaaaaatgacatttttag 34104797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 5137065 - 5137144
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||||||| ||| ||||| |||| |||||||| || |||||   ||||| |||| ||||||||||||||||||||||||    
T  5137065 aattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacct 5137144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 167
Target Start/End: Complemental strand, 12141180 - 12141113
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgt-ttttgcagttttagtcctacctcctatt 167  Q
    ||||||||||||||||||| |||  ||||| |||||||| ||||||||||||| || |||| ||||||    
T  12141180 tctttcaaatcgaacaaaaccatctctaaactatcatgttttttgcagttttaatcttaccccctatt 12141113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 37727014 - 37727093
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||||||| ||| ||||| |||| |||||||| || |||||   ||||| |||| ||||||||||||||||||||||||    
T  37727014 aattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacct 37727093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 41046785 - 41046864
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||||||| ||| ||||| |||| |||||||| || |||||   ||||| |||| ||||||||||||||||||||||||    
T  41046785 aattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacct 41046864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 41998679 - 41998636
Alignment:
Q  139 tttttgcagttttagtcctacctcctattttcaactccagaaac 182  Q
    |||||||||||||||||||||  |||||||||||||| ||||||    
T  41998679 tttttgcagttttagtcctactccctattttcaactctagaaac 41998636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 203
Target Start/End: Original strand, 38535372 - 38535469
Alignment:
Q  107 aaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||| | | |||| ||| |||||||| ||||||| ||||||| |||| ||||| |||||||| |||| || | |||||||||||||||    
T  38535372 aaatcgaacaaaatcgtccttaaactat-atgttttttgcagtttcagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttag 38535469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 203
Target Start/End: Original strand, 43678358 - 43678455
Alignment:
Q  107 aaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||| | | |||| ||| |||||||| |||||||||||| || |||| ||||| ||||||||||| | || | |||||||||||||||    
T  43678358 aaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcttatctccctatttccaactccagaagcgcacataaatgacagttttag 43678455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 207
Target Start/End: Complemental strand, 24301002 - 24300937
Alignment:
Q  142 ttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||| |||| |||||||| || |||||   ||||| |||| ||||||||||||||||||||||||    
T  24301002 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacct 24300937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 33412687 - 33412614
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaa 130  Q
    |||||||| || |||||||| |||||||  ||||| ||||||  |||||| |||||||||||||| | ||||||    
T  33412687 ttttggtcctcgcattttgatcagctcacgaaaatggttctgtctctttcgaatcgaacaaaatcgtccctaaa 33412614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 207
Target Start/End: Complemental strand, 39556023 - 39555958
Alignment:
Q  142 ttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||| |||| |||||||| || |||||   ||||| |||| ||||||||||||||||||||||||    
T  39556023 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacct 39555958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 41998325 - 41998390
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||||| || |||| ||||| |||||||| ||||  | |||||||||||||||||    
T  41998325 tttttgcagttttagtcatatctccctatttccaactccataaacgaacagaaatgacagttttag 41998390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 51828991 - 51828926
Alignment:
Q  139 tttttgcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||| || ||||||| ||||| || |||| || | |||||||||||||||    
T  51828991 tttttgcagttttagtcctatctccctatttccaacttcataaacgcacataaatgacagttttag 51828926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 32730446 - 32730549
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| |||| |||||||||| | |||||| ||| |||||||| ||||||||| || || |||| ||||| |||||| |||||| || | ||||||||||    
T  32730446 tcttttaaattgaacaaaatcgtccctaaactat-atgttttttgcagttttaatcgtatctccctatttccaactctagaaacgcacataaatgacagt 32730544  T
Q  199 tttag 203  Q
    |||||    
T  32730545 tttag 32730549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 43678773 - 43678670
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| ||||||||||||||| | | |||| ||| |||||||| ||||||| |||| || || ||||||| |||||| |||||| || | ||||||||||    
T  43678773 tcttttaaatcgaacaaaatcgtccataaactat-atgttttttgcagtttcagtcatatcttcctatttccaactctagaaacgcacataaatgacagt 43678675  T
Q  199 tttag 203  Q
    |||||    
T  43678674 tttag 43678670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 87; Significance: 7e-42; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 57 - 207
Target Start/End: Complemental strand, 205900 - 205750
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcc 156  Q
    |||| ||| |||||||||||||| ||||  ||||| || |||| ||||||||||||||||||| | | |||||| |||||||||||||||||||||||||    
T  205900 ttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatgtttttgcagttttagtcc 205801  T
Q  157 tacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||| ||||||||||||||||| |||| |||||||||| |||||||||||||    
T  205800 tacgtcctattttcaactccaaaaacgcagagaaatggcagttttagacct 205750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 125 - 207
Target Start/End: Original strand, 205031 - 205114
Alignment:
Q  125 cctaaattatcatgtttt-tgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||    
T  205031 cctaaactatcatgttttttgcagttttagtcctacctcctattttcaactctagaaacacagagaaatggaagttttagacct 205114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 125 - 207
Target Start/End: Original strand, 205461 - 205543
Alignment:
Q  125 cctaaattatcatgtttttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    |||||| |||||| |||||| ||||||||||| |||||||||||||||||| |||| |||||||||||| |||||||||||||    
T  205461 cctaaactatcatttttttgtagttttagtccaacctcctattttcaactctagaatcacagagaaatggcagttttagacct 205543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 143
Target Start/End: Complemental strand, 210870 - 210784
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt 143  Q
    |||||||| |||||||||||||| ||||| ||||| || |||| ||||||||||||||||||| | | |||||| |||||| |||||    
T  210870 ttttggtcctcacattttgaccaactcatgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcattttttt 210784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 34595305 - 34595158
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcc 156  Q
    |||||||| |||||||||||||| ||||  ||||| || |||| ||||| ||||||||||||||| | |||||| ||||||||||||||||||||||| |    
T  34595305 ttttggtcctcacattttgaccaactcacgaaaatggtcctgcatcttttaaatcgaacaaaatcgtccctaaactatcatgtttttgcagttttagtgc 34595206  T
Q  157 tacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||| || ||||||||||||||||||| || |||||||||||||||||    
T  34595205 tacccccttattttcaactccagaaacgcacagaaatgacagttttag 34595158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 57 - 207
Target Start/End: Original strand, 35578912 - 35579062
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttt-tgcagttttagtc 155  Q
    ||||||||||  |||||||||||||||| |||||| || ||||  |||||||||||||||||| | | | |||| ||||||||||| |||||||||| ||    
T  35578912 ttttggtcattgcattttgaccagctcacaaaaatggtcctgccactttcaaatcgaacaaaaccgt-cataaactatcatgttttttgcagttttaatc 35579010  T
Q  156 ctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    |||| |||||||||||||||||||||| ||||||||||||| ||||||||||    
T  35579011 ctacatcctattttcaactccagaaacgcagagaaatgacatttttagacct 35579062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 69 - 202
Target Start/End: Original strand, 9393761 - 9393894
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcctatt 167  Q
    |||||||| |||||||  ||||||||  ||| ||||||||||||||||||| | | |||||| |||||||||||| || |||||||||||||||||||||    
T  9393761 cattttgatcagctcacgaaaattgtcttgcctctttcaaatcgaacaaaaccgt-cctaaactatcatgttttttgctgttttagtcctacctcctatt 9393859  T
Q  168 ttcaactccagaaacacagagaaatgacagtttta 202  Q
    ||||||||||||||||||| |||||||||||||||    
T  9393860 ttcaactccagaaacacagtgaaatgacagtttta 9393894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 69 - 204
Target Start/End: Original strand, 39136711 - 39136846
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcctacctcctattt 168  Q
    ||||||||||||||||  ||||| ||||||  ||||||||||||||||||||| | |||||| |||||||||| |||| ||||||||||| |||  ||||    
T  39136711 cattttgaccagctcacgaaaatggttctgactctttcaaatcgaacaaaatcgtccctaaactatcatgtttatgcacttttagtcctaactctaattt 39136810  T
Q  169 tcaactccagaaacacagagaaatgacagttttaga 204  Q
    ||||||||||||||  | | ||||||||||||||||    
T  39136811 tcaactccagaaactaacaaaaatgacagttttaga 39136846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 56 - 182
Target Start/End: Original strand, 33880632 - 33880759
Alignment:
Q  56 tttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcat-gtttttgcagttttagt 154  Q
    ||||||||| ||  ||||||||||||||| |||||||||||||| ||||||||||||||||||| | | |||||||||||||  |||||||| |||||||    
T  33880632 tttttggtcctcgtattttgaccagctcacaaaaattgttctgcctctttcaaatcgaacaaaaccgtccctaaattatcatattttttgcacttttagt 33880731  T
Q  155 cctacctcctattttcaactccagaaac 182  Q
    |||||| | |||||||| || |||||||    
T  33880732 cctaccccttattttcaccttcagaaac 33880759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 68 - 201
Target Start/End: Original strand, 4477726 - 4477860
Alignment:
Q  68 acattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcctacctcctatt 167  Q
    ||||||||||||  |||  ||||| || | || ||||| |||| ||| |||||| | |||||| ||||||||||||||||||||||||||||||||||||    
T  4477726 acattttgaccaattcacgaaaatggtcccgcctcttttaaattgaataaaatcgtccctaaactatcatgtttttgcagttttagtcctacctcctatt 4477825  T
Q  168 ttc-aactccagaaacacagagaaatgacagtttt 201  Q
    ||| |||||||||||| ||| ||||||||||||||    
T  4477826 ttcaaactccagaaacgcagggaaatgacagtttt 4477860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 69 - 205
Target Start/End: Complemental strand, 9394251 - 9394115
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcctacctcctattt 168  Q
    |||||||||||||||| |||||| || || | | ||||||||||||||||| | | |||||| |||    |||||||||||||||||||| |||||||||    
T  9394251 cattttgaccagctcacaaaaatggtcctacctttttcaaatcgaacaaaaccgtccctaaactatatattttttgcagttttagtcctatctcctattt 9394152  T
Q  169 tcaactccagaaacacagagaaatgacagttttagac 205  Q
     ||||| || ||||||| |||||||||||||||||||    
T  9394151 ccaacttcaaaaacacaaagaaatgacagttttagac 9394115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 57 - 181
Target Start/End: Original strand, 49064047 - 49064171
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcc 156  Q
    |||||||| ||  |||||||||||||||  ||||| ||  ||| |||||||||| |||||||||| | | |||| ||||||||||||||| |||||||||    
T  49064047 ttttggtcctcgtattttgaccagctcacgaaaatggtattgcctctttcaaatagaacaaaatcttccataaactatcatgtttttgcacttttagtcc 49064146  T
Q  157 tacctcctattttcaactccagaaa 181  Q
    || ||||||||||||||||||||||    
T  49064147 taactcctattttcaactccagaaa 49064171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 108 - 203
Target Start/End: Original strand, 34594647 - 34594742
Alignment:
Q  108 aatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||| ||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||| | | |||||| ||||||||    
T  34594647 aatcaaacaaaatcatccctaaactatcatgtttttgcagttttagtcctaccccctattttcaactcgagaaacaaacataaatgatagttttag 34594742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 69 - 207
Target Start/End: Complemental strand, 35579406 - 35579268
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcctatt 167  Q
    |||||||| |||||||  |||||  || ||| ||||||||||| ||||||| | | |||||| |||||||||||| |||||||||||| |||||||||||    
T  35579406 cattttgatcagctcacgaaaatgattatgcctctttcaaatcaaacaaaaccgt-cctaaactatcatgttttttgcagttttagtcatacctcctatt 35579308  T
Q  168 ttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    |||||||| | |||| ||| ||||| ||||||||||||||    
T  35579307 ttcaactctaaaaacgcagggaaataacagttttagacct 35579268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 93 - 190
Target Start/End: Complemental strand, 45815563 - 45815465
Alignment:
Q  93 gttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt--gcagttttagtcctacctcctattttcaactccagaaacacagagaa 190  Q
    ||||||| ||||| ||||||||||||||| | |||||| ||||||||||||  ||||||||||| ||||||| ||||||||||||||||||| |||||||    
T  45815563 gttctgcctcttttaaatcgaacaaaatcgt-cctaaactatcatgtttttttgcagttttagttctacctcttattttcaactccagaaacgcagagaa 45815465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 32427470 - 32427402
Alignment:
Q  139 tttttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    |||||| |||||||||||| ||||||||||||||||| | |||| ||||||||||||||||||||||||    
T  32427470 tttttgtagttttagtccttcctcctattttcaactctaaaaacgcagagaaatgacagttttagacct 32427402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 25637681 - 25637584
Alignment:
Q  107 aaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||| | | |||| ||| |||||||| ||||||||||||||| |||| ||||| |||||||||||||||| |||||||||||||||||    
T  25637681 aaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttag 25637584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 203
Target Start/End: Original strand, 9181595 - 9181692
Alignment:
Q  107 aaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||| | | |||| |||  | |||||||||||||||||||| |||| ||||| ||||||||||||| || |||||||||||||||||    
T  9181595 aaatcgaacaaaatcgtccttaaactatattttttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 9181692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 16081788 - 16081685
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| ||||||||||||||||| |||||| ||| |||||||| ||||||||||||||| |||| ||||| |||||||| |||| || | ||||||||||    
T  16081788 tcttttaaatcgaacaaaatcatccctaaactat-atgttttttgcagttttagtcctatctccctatttccaactccaaaaacgcacaaaaatgacagt 16081690  T
Q  199 tttag 203  Q
    |||||    
T  16081689 tttag 16081685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 19590985 - 19590909
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  19590985 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 19590909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 19830860 - 19830804
Alignment:
Q  148 ttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19830860 tttttgtcctacctcctattttcaaactccagaaacacagagaaatgacagttttag 19830804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 28687988 - 28687885
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| ||||||||||||||| | |||||| ||| |||||||| ||| ||||||||||| || ||||||| ||||||||||||| || ||||||||||||    
T  28687988 tcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgcacttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagt 28687890  T
Q  199 tttag 203  Q
    |||||    
T  28687889 tttag 28687885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 26026374 - 26026478
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatg--tttttgcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacag 197  Q
    ||||| ||||||||||||||| | | |||| ||| |||  ||||||||||||||||| || || ||||||||||||||||||||| || |||||||||||    
T  26026374 tcttttaaatcgaacaaaatcgtccataaactat-atgtttttttgcagttttagtcttatctccctattttcaactccagaaacgcacagaaatgacag 26026472  T
Q  198 ttttag 203  Q
    ||||||    
T  26026473 ttttag 26026478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 37787227 - 37787153
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagtttt 201  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  37787227 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttt 37787153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 16081394 - 16081459
Alignment:
Q  139 tttttgcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||| || ||||||| |||||||| ||||||| |||||||||||||||||    
T  16081394 tttttgcagttttagtcctatctacctatttccaactccaaaaacacacagaaatgacagttttag 16081459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 7732545 - 7732648
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| ||||||||||||||| | | |||| ||| |||||||| ||||||||||||||| |||| |||||||||||||| |||| || | ||||||||||    
T  7732545 tcttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcctatctccctattttcaactccataaacgcacataaatgacagt 7732643  T
Q  199 tttag 203  Q
    |||||    
T  7732644 tttag 7732648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 33881035 - 33880971
Alignment:
Q  139 tttttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||||| || | ||||||||||||||||||||| || | |||||||||||||||    
T  33881035 tttttgcagttttagtcttatcccctattttcaactccagaaacgcacataaatgacagttttag 33880971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 11973891 - 11973788
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacagtt 199  Q
    ||||| |||| |||||||||| | |||||||||    ||||||||||||||||| ||| || ||||||| ||||| ||||||| || |||||||||||||    
T  11973891 tcttttaaattgaacaaaatcgtccctaaattaaatggtttttgcagttttagttctatcttcctatttccaacttcagaaacgcacagaaatgacagtt 11973792  T
Q  200 ttag 203  Q
    ||||    
T  11973791 ttag 11973788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 32004699 - 32004774
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagtttta 202  Q
    ||||||||| ||| ||||| |||| | |||||||||||||||||| |||||||||| |||||||||||||||||||    
T  32004699 aattatcatttttgttgcatttttcgccctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 32004774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 35288988 - 35289063
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagtttta 202  Q
    ||||||||| ||| ||||| |||| ||||||| || ||||||||| ||||||||||||||||||||||||||||||    
T  35288988 aattatcatttttgttgcatttttcgtcctacttcatattttcaaactccagaaacacagagaaatgacagtttta 35289063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 38859100 - 38859025
Alignment:
Q  130 attatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    |||||||| ||| ||||| |||| |||||||||||||||||||| |||||||||| ||||||||||| ||||||||    
T  38859100 attatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 38859025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 69 - 203
Target Start/End: Complemental strand, 48248113 - 48247977
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt--gcagttttagtcctacctcc-ta 165  Q
    ||||||||||| |||| |||||| || ||   | ||| ||||||||||||||| | | |||| ||| ||||||||  ||||||||||||| | |||| ||    
T  48248113 cattttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttttgcagttttagtcccatctcccta 48248015  T
Q  166 ttttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||| ||||||||||||| || |||||||||||||||||    
T  48248014 tttccaactccagaaacgcacagaaatgacagttttag 48247977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 166
Target Start/End: Complemental strand, 5334352 - 5334243
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcc 156  Q
    |||||||| |||||||||||||| ||||  ||||| || || | ||||| ||||||||||||||| | |||||| |||    ||||||||||||||||||    
T  5334352 ttttggtcctcacattttgaccaactcacgaaaatagtcctacctcttttaaatcgaacaaaatcgtccctaaactatatattttttgcagttttagtcc 5334253  T
Q  157 tacctcctat 166  Q
     ||| |||||    
T  5334252 aaccacctat 5334243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 24929754 - 24929689
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||| |||| ||||| |||||||| |||| || |||||||||||||||||    
T  24929754 tttttgcagttttagtcctatctccctatttccaactccaaaaacgcacagaaatgacagttttag 24929689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 202
Target Start/End: Original strand, 25637254 - 25637357
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt--gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacag 197  Q
    ||||| ||||||||||||||| | |||||| ||| ||||||||  | ||||||||||||| |||| ||||| ||||||||||||| || | |||||||||    
T  25637254 tcttttaaatcgaacaaaatcgtccctaaactat-atgtttttttgtagttttagtcctatctccctatttccaactccagaaacgcacataaatgacag 25637352  T
Q  198 tttta 202  Q
    |||||    
T  25637353 tttta 25637357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 27245299 - 27245364
Alignment:
Q  139 tttttgcagttttagtcctacctcct-attttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||| ||||| |||| ||||||||||||| || |||||||| ||||||||    
T  27245299 tttttgcagttttagtcctatctccttatttccaactccagaaacgcacagaaatgatagttttag 27245364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 57 - 200
Target Start/End: Original strand, 28687606 - 28687750
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcc 156  Q
    ||||||||||  ||||||||||| ||||  ||||| |||||   | ||  ||||||||||||||| | | |||| |||  | ||||||||||| ||||||    
T  28687606 ttttggtcatatcattttgaccaactcacgaaaatggttctatcttttataaatcgaacaaaatcgtccttaaactatattttttttgcagttctagtcc 28687705  T
Q  157 tacct-cctattttcaactccagaaacacagagaaatgacagttt 200  Q
    || || ||||||| ||||||||||||| || | ||||||||||||    
T  28687706 tatcttcctatttccaactccagaaacgcacataaatgacagttt 28687750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 203
Target Start/End: Complemental strand, 39388789 - 39388652
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatg--tttttgcagttttagtcctacct-ccta 165  Q
    ||||||||||| ||||  ||| |||| || | ||||| ||||||||||||||| |  ||||| ||| |||  |||||||||||||||||||| || ||||    
T  39388789 cattttgaccaactcacgaaatttgtcctacctcttttaaatcgaacaaaatcgtctctaaactat-atgtttttttgcagttttagtcctatctcccta 39388691  T
Q  166 ttttcaactccagaaacaca-gagaaatgacagttttag 203  Q
    |||||||||||| |||| ||  | |||||||||||||||    
T  39388690 ttttcaactccaaaaacgcacaaaaaatgacagttttag 39388652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 9181901 - 9181795
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgtttttg----cagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgac 195  Q
    ||||| ||||||||||||||| | |||||| ||| ||||||||     |||||||||||||| |||| ||||| ||||||||||||| || | |||||||    
T  9181901 tcttttaaatcgaacaaaatcgtccctaaactat-atgtttttttttccagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgac 9181803  T
Q  196 agttttag 203  Q
    ||||||||    
T  9181802 agttttag 9181795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 786878 - 786943
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||| |||| ||||| |||||||| |||| || |||| ||||||||||||    
T  786878 tttttgcagttttagtcctatctccctatttccaactccataaacgcacagaagtgacagttttag 786943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 167
Target Start/End: Original strand, 45815398 - 45815466
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatg--tttttgcagttttagtcctacctcctatt 167  Q
    ||||||||||||||||||| | | |||||| |||||||  ||||||||||||||||| |||||| ||||    
T  45815398 tctttcaaatcgaacaaaaccgtccctaaactatcatgtttttttgcagttttagtcttacctcttatt 45815466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 48247686 - 48247751
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||||| || |||| ||||| |||||||| |||| || |||||||||||||||||    
T  48247686 tttttgcagttttagtcatatctccctatttccaactccaaaaacgcacagaaatgacagttttag 48247751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 2658924 - 2659000
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttc-aactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| ||| |||||||||||||| ||||||| |||| |||||||||| |||||||||    
T  2658924 aattatcatttttgttgcatttttcgtcatacctcctattttcaaactccaaaaacgcagagaaatggcagttttag 2659000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 2758231 - 2758084
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtc 155  Q
    |||||||| || |||||||  || ||||  ||||| ||||| | ||||| ||||||||||||||| | | |||| ||| |||||||| |||| |||||||    
T  2758231 ttttggtcctcgcattttgttcaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactat-atgttttttgcaggtttagtc 2758133  T
Q  156 cta-cctcctattttcaactccagaaacacagagaaatgacagttttag 203  Q
     || || |||||||  |||||||||||| || | |||||||||||||||    
T  2758132 atatccccctatttctaactccagaaacgcatataaatgacagttttag 2758084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 4641904 - 4641828
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| |||||  ||| ||||||| |||||||||||| ||| |||||| ||||||||||||||||||||    
T  4641904 aattatcatttttgttgcatatttcgtcctacgtcctattttcaaactctagaaacgcagagaaatgacagttttag 4641828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 29099935 - 29100011
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttc-aactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||| ||| ||||||||  ||| |||||||||||||||    
T  29099935 aattatcatttttgttgcatttttcgtcctacctcctattttcaaaccccagaaacgtagataaatgacagttttag 29100011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 34533876 - 34533952
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||  |||||||||||||||||||| ||||| |||| ||||||||||||| ||||||    
T  34533876 aattatcatttttgttgcattttccgtcctacctcctattttcaaactccaaaaacgcagagaaatgacacttttag 34533952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 19830505 - 19830584
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||||||| ||| ||||| |||| |||||||| || |||||   ||||| |||| ||||||||||||||||||||||||    
T  19830505 aattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacct 19830584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 34534251 - 34534172
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||||||| ||| ||||| |||| |||||||| || |||||   ||||| ||| |||||||||||||||||||||||||    
T  34534251 aattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaaaacagagaaatgacagttttagacct 34534172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 37786852 - 37786931
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||||||| ||| ||||| |||| |||||||| || |||||   ||||| |||| ||||||||||||||||||||||||    
T  37786852 aattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacct 37786931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 38858728 - 38858807
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||||||| ||| ||||| |||| |||||||| || |||||   ||||| |||| ||||||||||||||||||||||||    
T  38858728 aattatcatttttgttgcatttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacct 38858807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 203
Target Start/End: Original strand, 5745702 - 5745799
Alignment:
Q  107 aaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||| | | |||| ||| |||||||| |||||||||||| || |||| ||||| | ||||||||||| || | |||||||||||||||    
T  5745702 aaatcgaacaaaatctttcttaaactat-atgttttttgcagttttagtcttatctccctatttcctactccagaaacgcacataaatgacagttttag 5745799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 203
Target Start/End: Original strand, 14311340 - 14311476
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttttg--cagttttagtcctacctcc-ta 165  Q
    |||||| |||| ||||||||| | ||| | | ||||| |||| ||| |||||| | |||||| ||| ||||||||   |||||||| ||||| |||| ||    
T  14311340 cattttaaccaactcataaaattggttatacctcttttaaattgaataaaatcgtccctaaactat-atgtttttttacagttttaatcctatctcccta 14311438  T
Q  166 ttttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||| |||||||| ||||||| | |||||||||||||||    
T  14311439 tttccaactccataaacacacataaatgacagttttag 14311476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 23952830 - 23952892
Alignment:
Q  142 ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||| |||| ||||||||| |||||||||| | |||||||| ||||||||||| ||||||||    
T  23952830 ttgcatttttcgtcctaccttctattttcaaaccccagaaacgcagagaaatgatagttttag 23952892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 26026801 - 26026704
Alignment:
Q  107 aaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||| ||| | |||| ||| |||||||| |||||||||||  || |||| ||||| |||||||| |||| || |||||||||||||||||    
T  26026801 aaatcgaacaaaaccatccttaaactat-atgttttttgcagttttagttttatctccctatttccaactccaaaaacgcatagaaatgacagttttag 26026704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 27245687 - 27245590
Alignment:
Q  107 aaatcgaacaaaatcatacctaaattatcatgt-ttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||| | | |||||||| |||| ||||||| |||||||| || |||| ||||| ||||||||||||| || |||||| | ||||||||    
T  27245687 aaatcgaacaaaatcgtccttaaattat-atgtattttgcaattttagtcatatctccctatttccaactccagaaacgcacagaaatcatagttttag 27245590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 11971433 - 11971498
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||| |||||||||||||| |||| ||||| ||| || ||||||||| | |||||||||||||||    
T  11971433 tttttacagttttagtcctatctccctatttccaattctagaaacacacataaatgacagttttag 11971498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 14311738 - 14311673
Alignment:
Q  139 tttttgcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||||| || || ||||||| |||||| |||||| || |||||||||| ||||||    
T  14311738 tttttgcagttttagtcttatctccctatttccaactctagaaacgcacagaaatgacaattttag 14311673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 15712460 - 15712525
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||| ||||||||||||| |||| ||||| |||||| |||||| || | |||||||||||||||    
T  15712460 tttttgtagttttagtcctatctccctatttccaactctagaaacgcacataaatgacagttttag 15712525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 26048067 - 26048108
Alignment:
Q  162 cctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||| ||||||||||||| || |||||||||||||||||    
T  26048067 cctatttccaactccagaaacgcacagaaatgacagttttag 26048108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 26048401 - 26048333
Alignment:
Q  136 atgtttttgcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||| || || ||||||| |||||||| |||  || | |||||||||||||||    
T  26048401 atgtttttgcagttttagtcatatctccctatttccaactccaaaaatgcacataaatgacagttttag 26048333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 35161291 - 35161189
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatg--tttttgcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacag 197  Q
    ||||| ||||||||||||||| | |||||| ||| |||  ||||||||||||||||| || || ||||||| |||||||| |||| || | |||||| ||    
T  35161291 tcttttaaatcgaacaaaatcgtccctaaactat-atgtttttttgcagttttagtcatatctccctatttccaactccataaacgcacataaatgatag 35161193  T
Q  198 tttt 201  Q
    ||||    
T  35161192 tttt 35161189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 158
Target Start/End: Complemental strand, 39137053 - 39136965
Alignment:
Q  70 attttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtccta 158  Q
    ||||||||| |||||  ||||| || |||| ||||| ||||||||||||||| | | |||| | |||| |||||| | |||||||||||    
T  39137053 attttgacccgctcacgaaaatggtcctgcctcttttaaatcgaacaaaatcgtccataaactctcatatttttgtacttttagtccta 39136965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 69 - 203
Target Start/End: Complemental strand, 35163708 - 35163572
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt---gcagttttagtcctacctccta 165  Q
    ||||||||||||||||  ||||| ||||||| ||||||||||| ||||||||| | |||||| ||| ||||||||   ||||||||||||||||||||||    
T  35163708 cattttgaccagctcacgaaaatggttctgcctctttcaaatcaaacaaaatcgtccctaaactat-atgttttttttgcagttttagtcctacctccta 35163610  T
Q  166 ttttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||| |||||||||||||||||||||||||    
T  35163609 ttttcaactccaaaaacacagagaaatgacagttttag 35163572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 69 - 205
Target Start/End: Original strand, 32836032 - 32836163
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcctacctcctattt 168  Q
    |||||||||||||||| |||||  || |||| ||||||||||||||||||| | | |||||| ||||||||||    ||||||||| |||||||||||||    
T  32836032 cattttgaccagctcacaaaaacggtcctgcctctttcaaatcgaacaaaaccgt-cctaaactatcatgttt----agttttagttctacctcctattt 32836126  T
Q  169 tcaactccagaaacacagagaaatgacagttttagac 205  Q
    |||||||| ||||||||||||||||||||||||||||    
T  32836127 tcaactcctgaaacacagagaaatgacagttttagac 32836163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 81 - 182
Target Start/End: Original strand, 11523721 - 11523824
Alignment:
Q  81 ctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttt--tgcagttttagtcctacctcctattttcaactccag 178  Q
    ||||||||||| ||| ||||||||||||||| ||||||| | | |||||| |||||||||||  |||||||||||||||||||| ||||||||||||||     
T  11523721 ctcataaaaatggttatgcttctttcaaatcaaacaaaaccgtccctaaactatcatgtttttttgcagttttagtcctacctcatattttcaactccat 11523820  T
Q  179 aaac 182  Q
    ||||    
T  11523821 aaac 11523824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 69 - 207
Target Start/End: Complemental strand, 32836517 - 32836379
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcctatt 167  Q
    ||||||||||||||||  ||||| ||  ||| ||||||||||||||||||| | | | |||| | | |||||||| |||||||||||||||||| |||||    
T  32836517 cattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgttcttaaactgt-atgttttttgcagttttagtcctaccttctatt 32836419  T
Q  168 ttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||||| |||||||  |||||||| ||||||||||||||    
T  32836418 ttcaacttcagaaacgaagagaaataacagttttagacct 32836379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 69 - 172
Target Start/End: Original strand, 35163209 - 35163312
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttt-tgcagttttagtcctacctcctatt 167  Q
    |||||||||||||||| |||||| ||  ||  ||||||||||||||||||| | | |||||| ||||||||||| |||||||||||||||||||||||||    
T  35163209 cattttgaccagctcacaaaaatggtcttgtctctttcaaatcgaacaaaaccgt-cctaaactatcatgttttttgcagttttagtcctacctcctatt 35163307  T
Q  168 ttcaa 172  Q
    |||||    
T  35163308 ttcaa 35163312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 33095771 - 33095853
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgtttt-tgcagttttagtcctacctcctattttcaactccagaaac 182  Q
    ||||||||||||||||||| | | |||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||    
T  33095771 tctttcaaatcgaacaaaaccgtccctaaactatcatgttttttgcagttttagtcctacctcctattttcacctccaaaaac 33095853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 57 - 182
Target Start/End: Original strand, 835407 - 835532
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcc 156  Q
    |||||||| ||||||||| | |||||||  ||||| ||  ||| |||||||||||||||||||   | |||||| |||||| ||||||||| ||||||||    
T  835407 ttttggtcctcacatttttagcagctcacgaaaatggtcttgcctctttcaaatcgaacaaaactgtccctaaactatcatttttttgcagctttagtcc 835506  T
Q  157 tacctcctattttcaactccagaaac 182  Q
    |||| |||||||||| ||||| ||||    
T  835507 taccccctattttcacctccaaaaac 835532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 10900024 - 10900104
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttagacct 207  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  10900024 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacct 10900104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 107 - 203
Target Start/End: Original strand, 5114531 - 5114628
Alignment:
Q  107 aaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||| | | |||| ||| |||||||| ||||||||||||||| |||| ||||| |||||||||||||||| |||||||||||||||||    
T  5114531 aaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttag 5114628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 31073631 - 31073528
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgtttt-tgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| ||||||||||||||  | |||||| ||| ||||||| |||||||||||||||| |||| ||||| ||||||||||||| || ||||||||||||    
T  31073631 tcttttaaatcgaacaaaattgtccctaaactat-atgttttgtgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagt 31073533  T
Q  199 tttag 203  Q
    |||||    
T  31073532 tttag 31073528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 101 - 202
Target Start/End: Complemental strand, 5120958 - 5120856
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| ||||||||||||||| | |||||| ||| |||||||| ||||||||||||||| |||| ||||| |||||||| |||| || ||||||||||||    
T  5120958 tcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagt 5120860  T
Q  199 ttta 202  Q
    ||||    
T  5120859 ttta 5120856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 20741550 - 20741485
Alignment:
Q  139 tttttgcagttttagtcctacctcctattttc-aactccagaaacacagagaaatgacagttttag 203  Q
    |||||||| |||| |||||||||||||||||| |||||||||||| ||||||||||||| ||||||    
T  20741550 tttttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttag 20741485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 31573820 - 31573885
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||| |||| ||||| ||||||||||||| || |||||||||||||||||    
T  31573820 tttttgcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagttttag 31573885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 11445447 - 11445371
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||||| ||| |||||| ||||||||||||||||||||    
T  11445447 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 11445371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 12935242 - 12935318
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||||| ||||| |||| ||||||||||||||||||||    
T  12935242 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 12935318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 22219813 - 22219737
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| || ||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  22219813 aattatcatttttgttgcatttttcgttctacctcctattttcaaactccagaaactcagagaaatgacagttttag 22219737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 31574214 - 31574111
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| ||||||||||||||| | |||||| ||| |||||||| |||||||||||| || |||| ||||||||||||||||||| || | |||||||| |    
T  31574214 tcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacaat 31574116  T
Q  199 tttag 203  Q
    |||||    
T  31574115 tttag 31574111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 22534165 - 22534208
Alignment:
Q  139 tttttgcagttttagtcctacctcctattttcaactccagaaac 182  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  22534165 tttttgcagttttagtcctacctcctattttcaactccaaaaac 22534208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 101 - 202
Target Start/End: Original strand, 25468906 - 25469010
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt---gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgaca 196  Q
    ||||| ||||||||||||||| | |||||| ||| ||||||||   ||||||||||||||| |||| |||||| || ||||||||| || ||||||||||    
T  25468906 tcttttaaatcgaacaaaatcgtccctaaactat-atgtttttcttgcagttttagtcctatctccctattttaaattccagaaacgcacagaaatgaca 25469004  T
Q  197 gtttta 202  Q
    ||||||    
T  25469005 gtttta 25469010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 31470414 - 31470476
Alignment:
Q  142 ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||| |||| |||||||||||||||||||| |||||||||| |||||||||| |||||||||    
T  31470414 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 31470476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 25472463 - 25472398
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||| |||| ||||| || |||||||||| || |||||||||||||||||    
T  25472463 tttttgcagttttagtcctatctccctatttccagctccagaaacgcacagaaatgacagttttag 25472398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 28636647 - 28636582
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||||| || |||| ||||| ||||||||||||| || |||||||||||||||||    
T  28636647 tttttgcagttttagtcttatctccctatttccaactccagaaacgcacagaaatgacagttttag 28636582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 29891531 - 29891466
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||| |||| ||||| ||||||||||||| || |||||||| ||||||||    
T  29891531 tttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgatagttttag 29891466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 11276695 - 11276751
Alignment:
Q  148 ttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    |||| |||||||||||||||||||| ||||| |||| ||||||||||||||||||||    
T  11276695 ttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 11276751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 28636347 - 28636425
Alignment:
Q  99 cttctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcctacct-cctattttcaactcca 177  Q
    ||||||| ||||||||||||||| | |||||| ||| |||||||||||||||||||| || || ||||||| ||||||||    
T  28636347 cttcttttaaatcgaacaaaatcgttcctaaactat-atgtttttgcagttttagtcatatctccctatttccaactcca 28636425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 182
Target Start/End: Complemental strand, 33096132 - 33096014
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatca----tacctaaattatcatgttttt-gcagttttagtcctacctcc 163  Q
    |||||| |||||||||| ||||| ||  ||  ||||||||||||||||||| ||    | | |||| |||||||||||| ||| ||||||||||||| ||    
T  33096132 catttttaccagctcatgaaaatggtcatgtctctttcaaatcgaacaaaaccaactgtccttaaactatcatgttttttgcaattttagtcctaccccc 33096033  T
Q  164 tattttcaactccagaaac 182  Q
    |||||||| ||||| ||||    
T  33096032 tattttcacctccaaaaac 33096014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 10900390 - 10900311
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||||||| ||| ||||| |||| |||||||| || |||||   ||||| |||| ||||||||||||||||||||||||    
T  10900390 aattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacct 10900311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 12935597 - 12935538
Alignment:
Q  148 ttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    |||| |||||||| || |||||   ||||| |||||||||||||||||||||||||||||    
T  12935597 ttttcgtcctaccccccattttattctccataaacacagagaaatgacagttttagacct 12935538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 15827739 - 15827794
Alignment:
Q  142 ttgcagttttagtcctacctcctattttc-aactccagaaacacagagaaatgaca 196  Q
    ||||| |||| |||||||||||||||||| |||||||||||| |||| ||||||||    
T  15827739 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgaca 15827794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 207
Target Start/End: Original strand, 20741199 - 20741264
Alignment:
Q  142 ttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||| |||| |||||||| || |||||   ||||| |||| ||||||||||||||||||||||||    
T  20741199 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacct 20741264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 30251142 - 30251077
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||| |||||||||| || |||| ||||| ||||||||||||| || ||||||||||| |||||    
T  30251142 tttttgtagttttagtcttatctccctatttccaactccagaaacgcacagaaatgacagatttag 30251077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 207
Target Start/End: Complemental strand, 2322628 - 2322600
Alignment:
Q  179 aaacacagagaaatgacagttttagacct 207  Q
    |||||||||||||||||||||||||||||    
T  2322628 aaacacagagaaatgacagttttagacct 2322600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 207
Target Start/End: Original strand, 11445123 - 11445151
Alignment:
Q  179 aaacacagagaaatgacagttttagacct 207  Q
    |||||||||||||||||||||||||||||    
T  11445123 aaacacagagaaatgacagttttagacct 11445151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 18505024 - 18505080
Alignment:
Q  148 ttttagtcctacctcctattttc-aactccagaaacacagagaaatgacagttttag 203  Q
    |||| |||||||||||||||||| ||||| |||||   |||||||||||||||||||    
T  18505024 ttttcgtcctacctcctattttcaaactctagaaatgtagagaaatgacagttttag 18505080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 23075588 - 23075512
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| || |||||||||||||| || ||||| |||  ||||||||||||||||||||    
T  23075588 aattatcatttttgttgcatttttcgttctacctcctatttttaaactccaaaaatgcagagaaatgacagttttag 23075512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 2e-35; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 57 - 207
Target Start/End: Original strand, 39485078 - 39485228
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttt-tgcagttttagtc 155  Q
    |||||||| || ||||||||| ||||||  ||||| || || | ||||||||||||||||||||| | |||||| ||| ||||||| |||||||||||||    
T  39485078 ttttggtcctcgcattttgactagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactat-atgttttttgcagttttagtc 39485176  T
Q  156 ctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||| ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  39485177 ctatctcctattttcaacttcagaaacacagagagatgacagttttagacct 39485228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 57 - 200
Target Start/End: Original strand, 23526671 - 23526815
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagt-c 155  Q
    |||||||| |||||||||||||||||||  ||||| || |||| ||||| ||||||||||||||||| |||| | |||||| |||||||||||||||| |    
T  23526671 ttttggtcctcacattttgaccagctcacgaaaatggtcctgcctcttttaaatcgaacaaaatcatccctagactatcatttttttgcagttttagtcc 23526770  T
Q  156 ctacctcctattttcaactccagaaacacagagaaatgacagttt 200  Q
    || || |||||||||||||||| |||| || ||||||||||||||    
T  23526771 ctgccccctattttcaactccaaaaacgcacagaaatgacagttt 23526815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 57 - 201
Target Start/End: Complemental strand, 29021398 - 29021252
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttc-tgcttctttcaaatcgaacaaaatcatacctaaattatcatg--tttttgcagttttag 153  Q
    |||||||| |||||||||||||||||||  ||||| |||| ||| ||||||||||||||||||||| | |||||||||||| |  |||||||||||||||    
T  29021398 ttttggtcctcacattttgaccagctcacgaaaat-gttcatgcctctttcaaatcgaacaaaatcgtccctaaattatcacggttttttgcagttttag 29021300  T
Q  154 tcctacctcctattttcaactccagaaacacagagaaatgacagtttt 201  Q
    || |||| ||||||||||||||||||||| || | |||||||||||||    
T  29021299 tcttaccccctattttcaactccagaaacgcacataaatgacagtttt 29021252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 69 - 205
Target Start/End: Complemental strand, 44802692 - 44802555
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcctatt 167  Q
    ||||||||||||||||  ||| | ||  ||| |||||||||  |||||||||| | |||||| |||||||||||| ||||||||||| ||||||||||||    
T  44802692 cattttgaccagctcacgaaagtggtcatgcctctttcaaacggaacaaaatcgtccctaaactatcatgttttttgcagttttagttctacctcctatt 44802593  T
Q  168 ttcaactccagaaacacagagaaatgacagttttagac 205  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  44802592 ttcaactccagaaacacagaaaaatgacaattttagac 44802555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 59 - 207
Target Start/End: Original strand, 17088161 - 17088314
Alignment:
Q  59 ttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt------gcagtttta 152  Q
    ||||||||| ||||||||||||||||  ||||| ||| ||| ||||||||||||||||||| | | |||||| ||||||||||||      ||| |||||    
T  17088161 ttggtcatcgcattttgaccagctcacgaaaatggttttgcctctttcaaatcgaacaaaaccgt-cctaaactatcatgtttttttttttgcaatttta 17088259  T
Q  153 gtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    |||||||||||||||||||||| ||||||  |||||||||| |||||||||||||    
T  17088260 gtcctacctcctattttcaacttcagaaatgcagagaaatggcagttttagacct 17088314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 69 - 203
Target Start/End: Original strand, 48173773 - 48173909
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatg--tttttgcagttttagtcctacctcctat 166  Q
    |||||||||||| ||| |||||| ||||||| |||||||||||||||||||||   ||||||||||||||  |||||||| |||||||| |||| |||||    
T  48173773 cattttgaccagttcacaaaaatggttctgcctctttcaaatcgaacaaaatcgaccctaaattatcatgtttttttgcacttttagtcataccccctat 48173872  T
Q  167 tttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||| |||| |  | |||||||||||||||    
T  48173873 tttcaactccaaaaactctcataaatgacagttttag 48173909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 50926774 - 50926627
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcc 156  Q
    ||||||||||| ||||||||||||||||  ||||| || | |  ||||||||||||||||||| | | |||||| |||||| ||||||||||||||||||    
T  50926774 ttttggtcatcgcattttgaccagctcacgaaaatggtcccgtctctttcaaatcgaacaaaaccgtccctaaactatcatttttttgcagttttagtcc 50926675  T
Q  157 -tacctcctattttcaactccagaaacacagagaaatgacagttttag 203  Q
     |||| |||||||||||||||| ||||||| | |||||  ||||||||    
T  50926674 ttaccccctattttcaactccataaacacacataaatggtagttttag 50926627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 57 - 207
Target Start/End: Complemental strand, 17088672 - 17088522
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcc 156  Q
    |||||||| || |||||||| |||||||  ||||| ||  ||| ||||||||||| ||||||| | | |||||| |||    |||||||||||||||| |    
T  17088672 ttttggtcctctcattttgaacagctcacgaaaatggtcatgcctctttcaaatcaaacaaaaccgtccctaaactatatattttttgcagttttagttc 17088573  T
Q  157 tacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    |||||||||||||||| || |||||| ||||||||||||||||||||||||    
T  17088572 tacctcctattttcaaatctagaaacgcagagaaatgacagttttagacct 17088522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 72 - 203
Target Start/End: Complemental strand, 9833670 - 9833538
Alignment:
Q  72 tttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcctattttc 170  Q
    |||||||| ||||  ||||| ||  ||| ||||||||||||||||||||| | |||||| ||| |||||||| ||||||||||||||||| |||||||||    
T  9833670 tttgaccaactcacgaaaatagtcatgcctctttcaaatcgaacaaaatcgtccctaaaatattatgttttttgcagttttagtcctaccccctattttc 9833571  T
Q  171 aactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||| || |||||| ||| ||||||    
T  9833570 aactccagaaacgcacagaaataacatttttag 9833538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 57 - 192
Target Start/End: Complemental strand, 45048668 - 45048533
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtc 155  Q
    |||||||| || |||||||||||| |||  ||||| ||  | | |||||| |||||||||||| | | |||||| |||||||||||| ||||||||||||    
T  45048668 ttttggtcctcgcattttgaccagttcacgaaaatggtcatacctctttccaatcgaacaaaaccgt-cctaaactatcatgttttttgcagttttagtc 45048570  T
Q  156 ctacctcctattttcaactccagaaacacagagaaat 192  Q
    ||||||||||||||||||||||||||| |||||||||    
T  45048569 ctacctcctattttcaactccagaaacgcagagaaat 45048533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 57 - 182
Target Start/End: Original strand, 44291314 - 44291442
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatg---tttttgcagttttag 153  Q
    |||||||| |||||||||||||||||||  ||||| ||| ||| |||||||||| |||||||||| | | |||| |||||||   |||||||||||||||    
T  44291314 ttttggtcctcacattttgaccagctcacgaaaatggttatgcctctttcaaattgaacaaaatcgtccataaactatcatgttttttttgcagttttag 44291413  T
Q  154 tcctacctcctattttcaactccagaaac 182  Q
    || |||||||| ||||||| |||||||||    
T  44291414 tcatacctcctgttttcaaatccagaaac 44291442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 57 - 203
Target Start/End: Original strand, 50926243 - 50926392
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt--gcagttttagt 154  Q
    |||||||| || ||||||||||||||||  |||||  |  | | ||||||||||||||||||||| | |||||| |||||| |||||  |||||||||||    
T  50926243 ttttggtcctcccattttgaccagctcacgaaaataatcatacctctttcaaatcgaacaaaatcgtccctaaactatcatttttttttgcagttttagt 50926342  T
Q  155 cct-acctcctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||| |||||||||||||||||||||||||||| | |||||  ||||||||    
T  50926343 ccttacctcctattttcaactccagaaacacacataaatggtagttttag 50926392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 70 - 199
Target Start/End: Complemental strand, 44291831 - 44291701
Alignment:
Q  70 attttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcat-acctaaattatcatgttttt-gcagttttagtcctacctcctatt 167  Q
    |||||||||||||||| ||||| ||  ||  ||||| |||||||| |||||| | |||||| | ||||||||||| ||||||||||||||||| ||||||    
T  44291831 attttgaccagctcatgaaaatggtcatgtctcttttaaatcgaataaaatcgtcacctaact-atcatgttttttgcagttttagtcctaccccctatt 44291733  T
Q  168 ttcaactccagaaacacagagaaatgacagtt 199  Q
    |||||||||||||||||| ||||||| |||||    
T  44291732 ttcaactccagaaacacatagaaatggcagtt 44291701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 69 - 205
Target Start/End: Original strand, 45048180 - 45048316
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttt-tgcagttttagtcctacctcctatt 167  Q
    ||||||||||| || |  ||||| ||||| | ||||| |||| |||||||||| | | |||| ||| ||||||| |||||||||||||||||||| ||||    
T  45048180 cattttgaccaacttacgaaaatggttctacctcttttaaattgaacaaaatcgtccataaactat-atgttttttgcagttttagtcctacctcatatt 45048278  T
Q  168 ttcaactccagaaacacagagaaatgacagttttagac 205  Q
    ||||||||||||||| || |||||| ||||||||||||    
T  45048279 ttcaactccagaaacgcatagaaataacagttttagac 45048316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 29307402 - 29307322
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttagacct 207  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  29307402 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacct 29307322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 69 - 203
Target Start/End: Complemental strand, 52336031 - 52335896
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcctacct-cctatt 167  Q
    ||||||||||| ||||| ||| | || || | ||||| ||||||||||||||| | |||||| |||  | ||||||||||||||||| || || ||||||    
T  52336031 cattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatattttttttgcagttttagtcatatctccctatt 52335932  T
Q  168 ttcaactccagaaacacagagaaatgacagttttag 203  Q
    | ||||||||||||| || | |||||||||||||||    
T  52335931 tccaactccagaaacgcacataaatgacagttttag 52335896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 70 - 203
Target Start/End: Original strand, 29020906 - 29021040
Alignment:
Q  70 attttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatg-tttttgcagttttagtcctacctcctattt 168  Q
    ||||||| |||||||||||||| ||  ||  ||||| ||||||||||||||||| | |||||||||||| |||||||| |||||||  |||  |||||||    
T  29020906 attttgatcagctcataaaaatggtcatgtctcttttaaatcgaacaaaatcatccttaaattatcatgttttttgcaattttagtgttactccctattt 29021005  T
Q  169 tcaactccagaaacacagagaaatgacagttttag 203  Q
    ||| ||||| |||| || | ||||| |||||||||    
T  29021006 tcacctccaaaaacgcacataaatgtcagttttag 29021040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 9992250 - 9992315
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||| |||| ||||| |||||||||||||||| |||||||||||||||||    
T  9992250 tttttgcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttag 9992315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 8230130 - 8230027
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtccta-cctcctattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| ||||||||||||||| | |||||| ||| |||||||| |||||||||||| || || ||||||| ||||||||||||| || ||||||||||||    
T  8230130 tcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgcagttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagt 8230032  T
Q  199 tttag 203  Q
    |||||    
T  8230031 tttag 8230027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 44954759 - 44954612
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtc 155  Q
    |||||||| || ||||||||||| ||||| |||||  |  | | | ||| ||||| ||||||||||| | |||| ||| |||||||| ||||||||||||    
T  44954759 ttttggtcctcgcattttgaccaactcatgaaaatgatcataccttttttaaatcaaacaaaatcatccataaactat-atgttttttgcagttttagtc 44954661  T
Q  156 ctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||| |||| ||||| ||||||||||||| || |||||||||||||||||    
T  44954660 ctatctccctatttccaactccagaaacgcacagaaatgacagttttag 44954612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 205
Target Start/End: Complemental strand, 17433675 - 17433597
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttagac 205  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  17433675 aattatcatttttgttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacagttttagac 17433597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 69 - 203
Target Start/End: Original strand, 6224722 - 6224859
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattat-cat-gtttttgcagttttagtcctacctc-cta 165  Q
    ||||||||||| ||||||||||| |||||  || ||| ||||||||||||||| | | ||||||||  ||  ||||| ||||||||||| || ||| |||    
T  6224722 cattttgaccaactcataaaaatggttcttgtttttttaaatcgaacaaaatcgtccttaaattatatatattttttacagttttagtcttatctctcta 6224821  T
Q  166 ttttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||| ||||||||||||| || | |||||||||||||||    
T  6224822 tttccaactccagaaacgcacataaatgacagttttag 6224859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 17641815 - 17641750
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||| |||| ||||| ||||||||||||| || |||||||||||||||||    
T  17641815 tttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 17641750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 57 - 177
Target Start/End: Complemental strand, 23527063 - 23526942
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcc 156  Q
    ||||| || ||||||||||| |||||||| ||||| ||  ||| | ||| ||||||||||||| | |  ||||| |||||| ||||||||||||||||||    
T  23527063 ttttgatcctcacattttgatcagctcatgaaaatggtcatgccttttttaaatcgaacaaaaccgtctctaaactatcatttttttgcagttttagtcc 23526964  T
Q  157 -tacctcctattttcaactcca 177  Q
     | || ||||||||||||||||    
T  23526963 gtgccccctattttcaactcca 23526942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 69 - 203
Target Start/End: Original strand, 30786796 - 30786932
Alignment:
Q  69 cattttgaccagctcataaaaattgttc-tgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttt-tgcagttttagtcctacct-ccta 165  Q
    ||||||||||| ||||  ||||||| || | | ||||| ||||||||||||||| | |||||| ||| ||||||| |||||||||||||||| || ||||    
T  30786796 cattttgaccaactcacgaaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgcagttttagtcctatctcccta 30786894  T
Q  166 ttttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||| |||||||| |||| || ||||||||| |||||||    
T  30786895 tttccaactccataaacgcacagaaatgacggttttag 30786932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 1837562 - 1837665
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| ||||||||||||||  | |||||| ||| |||||||| |||||||||||| || |||| ||||||||||||||||||| || | ||||||||||    
T  1837562 tcttttaaatcgaacaaaattgtccctaaactat-atgttttttgcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacagt 1837660  T
Q  199 tttag 203  Q
    |||||    
T  1837661 tttag 1837665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 9019423 - 9019343
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttagacct 207  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||||| | |||||||| ||||||||| ||||||||||||||    
T  9019423 aattatcatttttgttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaataacagttttagacct 9019343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 18984579 - 18984503
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||||| ||| ||||||||||||||||| |||||||||    
T  18984579 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactctagaaacacagagaaatggcagttttag 18984503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 37505522 - 37505454
Alignment:
Q  136 atgtttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||||||||||| |||| |||||||||||||| |||| || | |||||||||||||||    
T  37505522 atgtttttgcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttag 37505454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 5962677 - 5962739
Alignment:
Q  142 ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||| |||| || ||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  5962677 ttgcatttttcgttctacctcctattttcaaactccagaaacacagagtaatgacagttttag 5962739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 10279030 - 10278936
Alignment:
Q  107 aaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||| | | |||| ||| |||||||  |||||||||||||| |||| ||| | |||||||||||||||| |||||||||||||||||    
T  10279030 aaatcgaacaaaatcgtccttaaactat-atgtttt--cagttttagtcctatctccatatatccaactccagaaacacacagaaatgacagttttag 10278936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 203
Target Start/End: Original strand, 21938626 - 21938723
Alignment:
Q  107 aaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||| | | |||| ||| |||||||| ||||||||||||||| |||| ||||| |||||||| |||| || |||||||||||||||||    
T  21938626 aaatcgaacaaaatcgtccataaactat-atgttttttgcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttag 21938723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 50970363 - 50970437
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagtttt 201  Q
    ||||||||| ||| ||||| |||| ||||||||| |||||||||| |||||||||| ||||||||||||||||||    
T  50970363 aattatcatttttgttgcatttttcgtcctaccttctattttcaaactccagaaacgcagagaaatgacagtttt 50970437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 8229735 - 8229800
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||| |||| |||||  |||||||||||| || |||||||||||||||||    
T  8229735 tttttgcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttag 8229800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 202
Target Start/End: Complemental strand, 9992638 - 9992542
Alignment:
Q  107 aaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagtttta 202  Q
    ||||||||||||||| | | |||| ||| |||||||| ||||| ||||||||| |||| ||||||||||||||||||| |  ||||||||||||||||    
T  9992638 aaatcgaacaaaatcgtgcttaaactat-atgttttttgcagtattagtcctatctccctattttcaactccagaaacgcgtagaaatgacagtttta 9992542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 16299133 - 16299068
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||| |||| ||||| ||||||||||||| || |||||||||| ||||||    
T  16299133 tttttgcagttttagtcctatctccatatttccaactccagaaacgcacagaaatgacaattttag 16299068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 33144013 - 33144078
Alignment:
Q  139 tttttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||  ||| |||||||||||||||||||| ||| |||||| ||||||||||||||||||||    
T  33144013 tttttgcatatttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 33144078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 34555831 - 34555766
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||||| || |||| ||||| ||||||||||||| || |||||||||||||||||    
T  34555831 tttttgcagttttagtcatatctccctatttccaactccagaaacgcacagaaatgacagttttag 34555766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 2868241 - 2868094
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtc 155  Q
    ||||| || |||||||||||||| | ||  ||||| || || | ||||| ||||||||||||||| | |||| | ||| |||||||| ||||||||||||    
T  2868241 ttttgatcctcacattttgaccaacacacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctacactat-atgttttttgcagttttagtc 2868143  T
Q  156 cta-cctcctattttcaactccagaaacacagagaaatgacagttttag 203  Q
     || || ||||||| ||||||||||||| || | || ||||||||||||    
T  2868142 atatccccctatttccaactccagaaacgcacataagtgacagttttag 2868094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 15173554 - 15173478
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttc-aactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||| ||||| | |||| ||||||||||||||||||||    
T  15173554 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactctataaacgcagagaaatgacagttttag 15173478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 17112366 - 17112442
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttc-aactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||| |||||||||||| |||| |||||| ||||||||    
T  17112366 aattatcatttttattgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgatagttttag 17112442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 21856127 - 21856203
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| ||||  ||||| ||||||||||||| |||||||||| ||||||||||||||||||||    
T  21856127 aattatcatttttgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 21856203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 29870079 - 29870003
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||||| ||  |||||| ||||||||||||||||||||    
T  29870079 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactttagaaacgcagagaaatgacagttttag 29870003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 34555436 - 34555541
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgtttttg---cagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgaca 196  Q
    ||||| ||||||||||||||| | |||||| ||| ||||||||    |||||||||||||| |||| ||||| ||||||||||||| || |||||||| |    
T  34555436 tcttttaaatcgaacaaaatcgtccctaaactat-atgttttttttacagttttagtcctatctccctatttccaactccagaaacgcacagaaatgata 34555534  T
Q  197 gttttag 203  Q
    |||||||    
T  34555535 gttttag 34555541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 39154480 - 39154404
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttc-aactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||| |||| ||||||| ||||||||||||| ||||||    
T  39154480 aattatcatttttgttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacaattttag 39154404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 50305233 - 50305169
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagtttta 202  Q
    ||||||||||||||||| || |||| |||||||||||||| ||||||| | ||||||||||||||    
T  50305233 tttttgcagttttagtcatatctccctattttcaactccataaacacacataaatgacagtttta 50305169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 4636431 - 4636356
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagtttta 202  Q
    ||||||||| ||| ||||| |||| |||| ||||||||||||||| |||||||||| ||||||||||||| |||||    
T  4636431 aattatcatttttgttgcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaatttta 4636356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 10278605 - 10278709
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgtttt--tgcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacag 197  Q
    ||||| ||||||||||||||| | |||||| ||| |||||||  |||||||||||||||| || || |||| ||||||||||||| || | ||||||||     
T  10278605 tcttttaaatcgaacaaaatcgtccctaaactat-atgtttttttgcagttttagtcctatctccccatttgcaactccagaaacgcacataaatgacaa 10278703  T
Q  198 ttttag 203  Q
    ||||||    
T  10278704 ttttag 10278709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 1744422 - 1744487
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||||| || |||| ||||| ||||||||||||| || | |||||||||||||||    
T  1744422 tttttgcagttttagtcatatctccctatttccaactccagaaacgcacataaatgacagttttag 1744487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 203
Target Start/End: Original strand, 15646260 - 15646353
Alignment:
Q  112 gaacaaaatcatacctaaattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    |||||||||  ||| | ||||||||| ||| ||||| |||| |||||||||| ||||||||| ||||| |||  ||||||||||||||||||||    
T  15646260 gaacaaaatggtacttcaattatcatttttgttgcatttttcgtcctacctcatattttcaaactccataaatgcagagaaatgacagttttag 15646353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 23340278 - 23340343
Alignment:
Q  139 tttttgcagttttagtcctacctcct-attttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||||| || ||||| |||| ||||||||||||| |  |||||||||||||||||    
T  23340278 tttttgcagttttagtcatatctccttatttccaactccagaaacgctcagaaatgacagttttag 23340343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 44954321 - 44954386
Alignment:
Q  139 tttttgcagttttagtcctacctc-ctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||||| || ||| || ||| ||||||||||||| || |||||||||||||||||    
T  44954321 tttttgcagttttagtcgtatctctctgtttccaactccagaaacgcacagaaatgacagttttag 44954386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 444040 - 443937
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| ||||||||||||||| | |||||| ||| |||||||| ||||||||||||||| || ||||||| ||| |||| |||| |  | ||||||||||    
T  444040 tcttttaaatcgaacaaaatcgttcctaaactat-atgttttttgcagttttagtcctatctccctatttccaattccataaacgcgcataaatgacagt 443942  T
Q  199 tttag 203  Q
    |||||    
T  443941 tttag 443937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 8678626 - 8678702
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||    
T  8678626 aattatcatttttgttgcatttttcgtcctacctgctattttcaaacttcagaaacgcaaagaaatgacagttttag 8678702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 16298739 - 16298842
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgtttt-tgcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| ||||||||||||||| | |||||| ||| ||||||| |||||||||||||||| || ||||||| ||||||  ||||| || | |||||| |||    
T  16298739 tcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgcagttttagtcctatctacctatttccaactctggaaacgcaaataaatgatagt 16298837  T
Q  199 tttag 203  Q
    |||||    
T  16298838 tttag 16298842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 37421217 - 37421322
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt---gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgaca 196  Q
    ||||| ||||||||||||||| | |||||| ||| ||||||||   |||||||||||| ||  ||| ||||| |||||||| |||| || ||||||||||    
T  37421217 tcttttaaatcgaacaaaatcgtccctaaactat-atgttttttttgcagttttagtcatatttccctatttccaactccaaaaacgcacagaaatgaca 37421315  T
Q  197 gttttag 203  Q
    |||||||    
T  37421316 gttttag 37421322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 5540278 - 5540199
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||||||| ||| ||||| |||| |||||||| || |||||   ||||| |||| ||||||||||||||||||||||||    
T  5540278 aattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacct 5540199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 5963038 - 5962959
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||||||| ||| ||||| |||| |||||||| || |||||   ||||| |||| ||||||||||||||||||||||||    
T  5963038 aattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacct 5962959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 15173181 - 15173260
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||||||| ||| ||||| |||| |||||||| || |||||   ||||| |||| ||||||||||||||||||||||||    
T  15173181 aattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacct 15173260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 15646655 - 15646576
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||||||| ||| ||||| |||| |||||||| || |||||   ||||| |||| ||||||||||||||||||||||||    
T  15646655 aattatcatttttgttgcatttttcgtcctacccccaattttattctccaaaaacgcagagaaatgacagttttagacct 15646576  T

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Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 29307038 - 29307117
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||||||| ||| ||||| |||| |||||||| || |||||   ||||| |||| ||||||||||||||||||||||||    
T  29307038 aattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacct 29307117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 143 - 182
Target Start/End: Complemental strand, 48174161 - 48174122
Alignment:
Q  143 tgcagttttagtcctacctcctattttcaactccagaaac 182  Q
    |||||||||||||| ||| |||||||||||||||||||||    
T  48174161 tgcagttttagtcccaccccctattttcaactccagaaac 48174122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 50970738 - 50970659
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||||||| ||| ||||| |||| |||||||| || |||||   ||||| |||| ||||||||||||||||||||||||    
T  50970738 aattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacct 50970659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 203
Target Start/End: Original strand, 4080084 - 4080181
Alignment:
Q  107 aaatcgaacaaaatcatacctaaattatcatgtttttg-cagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||| | |||||| ||| ||||||||  ||||||||||| || |||| ||||| |||||| |||||| || | |||||||||||||||    
T  4080084 aaatcgaacaaaatcgtccctaaactat-atgttttttacagttttagtcatatctccctatttccaactctagaaacgcacaaaaatgacagttttag 4080181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 119
Target Start/End: Original strand, 25274769 - 25274831
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaa 119  Q
    |||||||| || ||||||||||||||||  ||||| ||  ||| |||||||||||||||||||    
T  25274769 ttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaa 25274831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 29438987 - 29439091
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatg--tttttgcagttttagtcctacctc-ctattttcaactccagaaacacagagaaatgacag 197  Q
    ||||| ||||||||||||||| | |||||| ||  |||  |||||||||||||||||||| ||| |||||||||| || | ||||||| | |||| ||||    
T  29438987 tcttttaaatcgaacaaaatcgtccctaaacta-aatgtttttttgcagttttagtcctatctctctattttcaattcaaaaaacacacaaaaataacag 29439085  T
Q  198 ttttag 203  Q
    ||||||    
T  29439086 ttttag 29439091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 203
Target Start/End: Original strand, 37505092 - 37505228
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatg--tttttgcagttttagtcctacct-ccta 165  Q
    ||||||||||| ||||  ||||| |||||   | ||| ||||||||||||||| | | |||| ||| |||  ||||||||||||||||||||  | ||||    
T  37505092 cattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttttgcagttttagtcctatttcccta 37505190  T
Q  166 ttttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||| |||   | |||||||||||||||||    
T  37505191 ttttcaactccaaaaatgaacagaaatgacagttttag 37505228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 17641460 - 17641525
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||| ||||||||| ||| |||| ||||| ||||||||||||| || | |||||||||||||||    
T  17641460 tttttgtagttttagttctatctccctatttccaactccagaaacgcacataaatgacagttttag 17641525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 30787199 - 30787158
Alignment:
Q  162 cctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||| |||  ||||||||||||||||||||    
T  30787199 cctattttcaactccataaatgcagagaaatgacagttttag 30787158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 207
Target Start/End: Complemental strand, 33144365 - 33144300
Alignment:
Q  142 ttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||| |||| |||||||| || |||||   ||||| |||| ||||||||||||||||||||||||    
T  33144365 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacct 33144300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 5539921 - 5539977
Alignment:
Q  148 ttttagtcctacctcctattttc-aactccagaaacacagagaaatgacagttttag 203  Q
    |||| |||||||||||||||||| ||||||| |||| || ||||||| |||||||||    
T  5539921 ttttcgtcctacctcctattttcaaactccataaacgcatagaaatggcagttttag 5539977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 26859144 - 26859220
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||| ||||||||| |||||||||| ||||||| | | ||||||||    
T  26859144 aattatcatttttgttgcatttttcgtcctacctcatattttcaaactccagaaacgcagagaagtaatagttttag 26859220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 170
Target Start/End: Complemental strand, 36229443 - 36229399
Alignment:
Q  127 taaattatcatgttttt-gcagttttagtcctacctcctattttc 170  Q
    |||| |||||||||||| |||||||||||| ||||||||||||||    
T  36229443 taaactatcatgttttttgcagttttagtcatacctcctattttc 36229399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 44582114 - 44582217
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgtttt-tgcagttttagtcctacctc-ctattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| ||||||||||||||| |  ||||||||| ||||||| |||||||||||||||| |||  | ||| |||||||| |||| || | |||||||| |    
T  44582114 tcttttaaatcgaacaaaatcgtctctaaattat-atgttttttgcagttttagtcctatctctttgtttccaactccataaacgcacataaatgacaat 44582212  T
Q  199 tttag 203  Q
    |||||    
T  44582213 tttag 44582217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 57 - 207
Target Start/End: Original strand, 15126 - 15276
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcc 156  Q
    ||||||||||| |||||||||||||||   |||||  |||||| ||||||||||||||||||| ||  |||||| |||||||||||||||||||| |||     
T  15126 ttttggtcatcgcattttgaccagctcgcgaaaatgattctgcctctttcaaatcgaacaaaaacaaccctaaactatcatgtttttgcagtttttgtct 15225  T
Q  157 tacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    |||||||||||||||||| || |||| || |||||| ||| ||||||||||    
T  15226 tacctcctattttcaacttcataaacgcacagaaataacaattttagacct 15276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 56 - 182
Target Start/End: Complemental strand, 15632 - 15506
Alignment:
Q  56 tttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtc 155  Q
    ||||||||  || |||||||| |||||||  ||||| || |||  |||||||||||||||||||   | |||||| ||||||||||||| ||||||||||    
T  15632 tttttggttctcgcattttgatcagctcacgaaaatggtcctgactctttcaaatcgaacaaaactgtccctaaactatcatgtttttgtagttttagtc 15533  T
Q  156 ctacctcctattttcaactccagaaac 182  Q
     ||||||||||||||||||||||||||    
T  15532 atacctcctattttcaactccagaaac 15506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 1e-34; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 58 - 207
Target Start/End: Original strand, 35193322 - 35193471
Alignment:
Q  58 tttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttt-tgcagttttagtcc 156  Q
    ||||||| || |||||||| |||||||  ||||| || || | ||||||||||||||||||||| | |||||| ||| ||||||| ||||||||||||||    
T  35193322 tttggtcctcgcattttgatcagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactat-atgttttttgcagttttagtcc 35193420  T
Q  157 tacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    || ||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  35193421 tatctcctattttcaacttcagaaacgcagagaaatgacagttttagacct 35193471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 207
Target Start/End: Original strand, 17503989 - 17504137
Alignment:
Q  59 ttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttt-tgcagttttagtcct 157  Q
    |||||| || ||||||||||| ||||  ||||| || |||| |||||||||| ||||| || | | |||||| ||||||||||| |||||||||||||||    
T  17503989 ttggtcctcgcattttgaccatctcacgaaaatggtcctgcctctttcaaatggaacataaccgt-cctaaactatcatgttttttgcagttttagtcct 17504087  T
Q  158 acctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||    
T  17504088 acctcctattttcaactccagaaacgtagagaaatgacagttttagacct 17504137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 229692 - 229545
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcc 156  Q
    |||||||| || ||||||||||||||||  ||||| ||  ||| ||||||||||| ||||||||| | | |||| ||||||||||||||||||||| |||    
T  229692 ttttggtcttcgcattttgaccagctcacgaaaatggtcttgcctctttcaaatcaaacaaaatcgtccttaaactatcatgtttttgcagttttaatcc 229593  T
Q  157 tacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||| ||||||||||||||||||| || |||| ||||| ||||||    
T  229592 tacctccttattttcaactccagaaacgcacagaagtgacaattttag 229545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 18965197 - 18965300
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagtt 199  Q
    ||||||||||||||||||||| | | |||| ||||||||||||||||||||||| |||||||| |||||||||||| |||||| || | |||||||||||    
T  18965197 tctttcaaatcgaacaaaatcgtccttaaactatcatgtttttgcagttttagttctacctccttattttcaactctagaaacgcatataaatgacagtt 18965296  T
Q  200 ttag 203  Q
    ||||    
T  18965297 ttag 18965300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 69 - 207
Target Start/End: Original strand, 40160119 - 40160257
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttt-tgcagttttagtcctacctcctatt 167  Q
    |||||| |||||||||  ||||| ||  ||| ||||| ||||||||||||| | | |||||| ||| ||||||| |||||||||||||||||||||||||    
T  40160119 cattttaaccagctcacgaaaatagtcatgcctcttttaaatcgaacaaaaccgtccctaaactat-atgttttttgcagttttagtcctacctcctatt 40160217  T
Q  168 ttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    |||||||| | |||||  ||||||||||||||||||||||    
T  40160218 ttcaactctataaacatggagaaatgacagttttagacct 40160257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 69 - 203
Target Start/End: Complemental strand, 24336284 - 24336149
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgt-ttttgcagttttagtcctacctcctatt 167  Q
    ||||||||| ||||||  ||||| || |||| ||||||||||||||||||| | | ||||||||||||||| ||||||  ||||||||||||| | ||||    
T  24336284 cattttgacaagctcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgttcctaaattatcatgttttttgctcttttagtcctaccccatatt 24336185  T
Q  168 ttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||  | ||||||| ||| |||||    
T  24336184 ttcaactccagaaacgtatagaaatggcagctttag 24336149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 69 - 202
Target Start/End: Original strand, 24335786 - 24335920
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcctatt 167  Q
    ||||||||||||||||  ||||| ||  ||| ||||||||||||||||||| | || || || |||||||||||| | ||||||||||||||  ||||||    
T  24335786 cattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtatctgaactatcatgttttttggagttttagtcctacaccctatt 24335885  T
Q  168 ttcaactccagaaacacagagaaatgacagtttta 202  Q
    |||||||||| |||| || | ||||||||||||||    
T  24335886 ttcaactccaaaaacgcacataaatgacagtttta 24335920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 56 - 191
Target Start/End: Complemental strand, 40160624 - 40160489
Alignment:
Q  56 tttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagt 154  Q
    ||||||||| |  ||||||||||| ||||  ||||| ||  ||| |||||||||| |||||||| | | |||||| |||||||||||| |||||||||||    
T  40160624 tttttggtccttgcattttgaccaactcacgaaaatagtcatgcctctttcaaattgaacaaaaccgt-cctaaactatcatgttttttgcagttttagt 40160526  T
Q  155 cctacctcctattttcaactccagaaacacagagaaa 191  Q
    | ||||||||||||||||||||||||||  |||||||    
T  40160525 cttacctcctattttcaactccagaaacgtagagaaa 40160489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 57 - 203
Target Start/End: Original strand, 229174 - 229321
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcc 156  Q
    |||||||| ||  ||||||||||||||   ||||| ||  ||| |||||||||| |||||||||| | | |||| ||||||||||||||||||||||| |    
T  229174 ttttggtcctcgtattttgaccagctcgcgaaaatggtcttgcctctttcaaattgaacaaaatcgtccttaaactatcatgtttttgcagttttagttc 229273  T
Q  157 tac-ctcctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||| | | |||||||||||||| |||| || | || ||||||||||||    
T  229274 tactcccttattttcaactccataaacgcacaaaagtgacagttttag 229321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 35193823 - 35193702
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttttgca-gttttagtcctacctcctatt 167  Q
    ||||||||  ||||||  ||||| || |||| ||||||||||| ||||||| | | |||||| ||||||||||||  | ||||||||| |||||||||||    
T  35193823 cattttgataagctcacgaaaatggtcctgcctctttcaaatctaacaaaaccgt-cctaaactatcatgttttttgatgttttagtcatacctcctatt 35193725  T
Q  168 ttcaactccagaaacacagagaa 190  Q
    ||||||||||||||| |||||||    
T  35193724 ttcaactccagaaacgcagagaa 35193702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 129 - 205
Target Start/End: Original strand, 46193490 - 46193568
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttagac 205  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  46193490 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagac 46193568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 17504410 - 17504341
Alignment:
Q  139 tttttgcagttttagtcctacctcctatttt-caactccagaaacacagagaaatgacagttttagacct 207  Q
    |||||||| ||||||| |||||||||||||| |||||| |||||| ||||||||||||||||||||||||    
T  17504410 tttttgcaattttagtactacctcctatttttcaactctagaaacgcagagaaatgacagttttagacct 17504341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 112 - 203
Target Start/End: Complemental strand, 18965614 - 18965522
Alignment:
Q  112 gaacaaaatcatacctaaattatcatgtttttgcagttttagtcctac-ctcctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||| | |||||| ||||||||||||| |||||||||| ||| | |||||||||||||||| |||| || | |||||||||||||||    
T  18965614 gaacaaaatcgttcctaaactatcatgtttttgtagttttagtcatactcccctattttcaactccataaacgcacataaatgacagttttag 18965522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 69 - 203
Target Start/End: Original strand, 33689854 - 33689988
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcctacctcc-tatt 167  Q
    ||||||||||| |||| |||| | || || | ||||| ||||||||||||||| | | |||| ||| |||||||||||||||||||| || |||| ||||    
T  33689854 cattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaactat-atgtttttgcagttttagtcatatctccctatt 33689952  T
Q  168 ttcaactccagaaacacagagaaatgacagttttag 203  Q
    | ||||||||||||| || | |||||||||| ||||    
T  33689953 tacaactccagaaacgcacataaatgacagtgttag 33689988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 158
Target Start/End: Original strand, 23986533 - 23986635
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatg-tttttgcagttttagtc 155  Q
    |||||||| |||||||||||||||||||  ||||| ||  ||  |||||||||||||||||||   | |||||| ||||||| |||||||||||||||||    
T  23986533 ttttggtcctcacattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaactgtccctaaactatcatgttttttgcagttttagtc 23986632  T
Q  156 cta 158  Q
    |||    
T  23986633 cta 23986635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 34807173 - 34807277
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt--gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacag 197  Q
    ||||| ||||||||||||||| | |||||| ||| ||||||||  ||||||||||||||| |||| ||||| ||||||||||||| || | |||||||||    
T  34807173 tcttttaaatcgaacaaaatcgtccctaaagtat-atgtttttttgcagttttagtcctatctccatatttccaactccagaaacgcacataaatgacag 34807271  T
Q  198 ttttag 203  Q
    ||||||    
T  34807272 ttttag 34807277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 48526627 - 48526565
Alignment:
Q  142 ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||| |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  48526627 ttgcatttttcgtcctacctcctattttcaaactccataaacacagagaaatgacagttttag 48526565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 12593474 - 12593409
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||| |||| ||||||||||||||||||| || || ||||||||||||||    
T  12593474 tttttgcagttttagtcctatctccctattttcaactccagaaacgcacaggaatgacagttttag 12593409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 14439923 - 14439988
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||| |||| ||||| ||||||||||||| || |||||||||||||||||    
T  14439923 tttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 14439988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 45838998 - 45838933
Alignment:
Q  139 tttttgcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||| || ||||||| ||||||||||||| || |||||||||||||||||    
T  45838998 tttttgcagttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagttttag 45838933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 11153231 - 11153307
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||||| | |||||||| ||||||||||||||||||||    
T  11153231 aattatcatttttgttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaatgacagttttag 11153307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 12503521 - 12503597
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||||| |||||||||| ||||||||| ||||||||||    
T  12503521 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaattacagttttag 12503597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 202
Target Start/End: Original strand, 15523331 - 15523395
Alignment:
Q  139 tttttgcagttttagtcctacctcctattttc-aactccagaaacacagagaaatgacagtttta 202  Q
    |||||||| |||| |||||||||||||||||| ||||| |||||| |||||||||||||||||||    
T  15523331 tttttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagtttta 15523395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 20470971 - 20470895
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||||| |||||||||| ||||||||||| ||||||||    
T  20470971 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 20470895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 22434284 - 22434340
Alignment:
Q  148 ttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    |||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  22434284 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 22434340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 28465138 - 28465241
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| ||||||||||||||| | | |||| ||| |||||||| |||||||||||| || |||| ||||||||||||||||||| || | ||||||||||    
T  28465138 tcttttaaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacagt 28465236  T
Q  199 tttag 203  Q
    |||||    
T  28465237 tttag 28465241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 45082884 - 45082808
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||||| ||| |||||| ||||||||||||||||||||    
T  45082884 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 45082808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 46737144 - 46737041
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| ||||||||||||||| | |||||| ||| |||||||| |||||||||||| || || ||||| | ||||||||||||| || ||||||||||||    
T  46737144 tcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgcagttttagtcatatcttcctatctccaactccagaaacgcacagaaatgacagt 46737046  T
Q  199 tttag 203  Q
    |||||    
T  46737045 tttag 46737041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 54440628 - 54440729
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagtt 199  Q
    ||||| ||||||||||||||| | |||||| |||  |  ||||||||||||||||||| |||| ||||||||||| ||||||  || |||||||||||||    
T  54440628 tcttttaaatcgaacaaaatcgtccctaaactatgtt--ttttgcagttttagtcctatctccctattttcaacttcagaaatgcacagaaatgacagtt 54440725  T
Q  200 ttag 203  Q
    ||||    
T  54440726 ttag 54440729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 25938131 - 25938056
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagtttta 202  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  25938131 aattatcatttttgttgcattttttgtcctacctcctattttcaaactccagaaacacaaagaaatggcagtttta 25938056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 51021255 - 51021180
Alignment:
Q  129 aattatcatgtttttgcagttttagtcctacctcctattttc-aactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| || ||||| |||| |||||||||||||||||| |||||||||||| |||||||||| || ||||||    
T  51021255 aattatcattttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcaattttag 51021180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 203
Target Start/End: Original strand, 12593087 - 12593184
Alignment:
Q  107 aaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||| | | |||| ||| |||||||| ||| ||||| ||||| |||| ||||||||||||||||||| || |||||||||||||||||    
T  12593087 aaatcgaacaaaatcgtccttaaactat-atgttttttgcaattttaatcctatctccctattttcaactccagaaacgcacagaaatgacagttttag 12593184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 14440311 - 14440214
Alignment:
Q  107 aaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||||| | |||| ||| |||||||| |||||||||||| || |||| ||||| |||||| |||||| || |||||||||||||||||    
T  14440311 aaatcgaacaaaatcatccttaaactat-atgttttttgcagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttag 14440214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 19528926 - 19529030
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt--gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacag 197  Q
    ||||| |||||||| |||||| | |||||| ||| ||||||||  ||||||||||||||| |||| ||||| ||||||| ||||| || |||||||||||    
T  19528926 tcttttaaatcgaataaaatcgtccctaaactat-atgtttttttgcagttttagtcctatctccctatttccaactccggaaacgcacagaaatgacag 19529024  T
Q  198 ttttag 203  Q
    ||||||    
T  19529025 ttttag 19529030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 24851955 - 24851851
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt--gcagttttagtcctacctc-ctattttcaactccagaaacacagagaaatgacag 197  Q
    ||||| ||||||||||||||| | |||||| ||| ||||||||  ||||||||||||||| ||  |||||| ||||||||||||| || |||||||| ||    
T  24851955 tcttttaaatcgaacaaaatcgtccctaaactat-atgtttttttgcagttttagtcctatctttctatttccaactccagaaacgcacagaaatgaaag 24851857  T
Q  198 ttttag 203  Q
    ||||||    
T  24851856 ttttag 24851851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 21034687 - 21034622
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||| ||| |||| ||||| |||||||||||||||| | |||||||||||||||    
T  21034687 tttttgcagttttagttctatctccctatttccaactccagaaacacacaaaaatgacagttttag 21034622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 26974379 - 26974444
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||| |||||||||||||| |||| ||||| ||||||||||||| || |||||||||||||||||    
T  26974379 tttttacagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 26974444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 35643662 - 35643727
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||| |||| ||||| |||||||| |||| || |||||||||||||||||    
T  35643662 tttttgcagttttagtcctatctccctatttacaactccataaacgcacagaaatgacagttttag 35643727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 46736750 - 46736815
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| |||| ||||| |||| ||||||||||||||||||| || |||||||||||||||||    
T  46736750 tttttgcagatttaatcctatctccctattttcaactccagaaacgcacagaaatgacagttttag 46736815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 12234789 - 12234713
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttc-aactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||| ||| |||||||  ||||||||||||||||||||    
T  12234789 aattatcatttttgttgcatttttcgtcctacctcctattttcaaaccccagaaatgcagagaaatgacagttttag 12234713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 25447332 - 25447408
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttc-aactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||| ||||||| |||| ||||||||||||| ||||||    
T  25447332 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacaattttag 25447408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 54995154 - 54995230
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttc-aactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||| |||||||||||   |||||||||||||||||||    
T  54995154 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 54995230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 203
Target Start/End: Complemental strand, 34807619 - 34807525
Alignment:
Q  110 tcgaacaaaatcatacctaaattatcatgtttttg-cagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||| | | |||| ||| ||||||||| |||||||||||||| |||| ||||| |||||||| |||| || |||||||||||||||||    
T  34807619 tcgaacaaaatcgtccttaaactat-atgtttttggcagttttagtcctatctccctatttccaactccataaacgcatagaaatgacagttttag 34807525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 34789872 - 34789768
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt--gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacag 197  Q
    ||||| ||||||||||||||  | |||||| ||| ||||||||  ||||||||||||||| |||| ||||| |||||||| |||| || | |||||||||    
T  34789872 tcttttaaatcgaacaaaattgtccctaaactat-atgtttttttgcagttttagtcctatctccctatttccaactccaaaaacgcacataaatgacag 34789774  T
Q  198 ttttag 203  Q
    ||||||    
T  34789773 ttttag 34789768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 56077807 - 56077710
Alignment:
Q  107 aaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||| | | |||| ||| |||||||| ||||||||||||||| |||| ||||| |||||| |||||| || | |||||||||||||||    
T  56077807 aaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcctatctccctatttccaactctagaaacgcacaaaaatgacagttttag 56077710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 6616768 - 6616833
Alignment:
Q  139 tttttgcagttttagtcctacctc-ctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||| || ||||||||||||| |||||| ||||||||||||| || | |||||||||||||||    
T  6616768 tttttgctgtgttagtcctacctctctatttccaactccagaaacgcacataaatgacagttttag 6616833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 16214946 - 16214881
Alignment:
Q  139 tttttgcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||| | ||| || |||||||||||||||||||||||| | |||||| ||||||||    
T  16214946 tttttgcagttttaattctatcttcctattttcaactccagaaacacacataaatgatagttttag 16214881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 24851560 - 24851625
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||||| || |||| ||||| ||||||||||||| || | |||||||||||||||    
T  24851560 tttttgcagttttagtcttatctccctatttccaactccagaaacgcacaaaaatgacagttttag 24851625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 41608470 - 41608535
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||| |||| ||||| ||||| || |||| || |||||||||||||||||    
T  41608470 tttttgcagttttagtcctatctccatatttccaacttcaaaaacgcacagaaatgacagttttag 41608535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 2118378 - 2118454
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttc-aactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||| |||| ||||||| |||||||||  |||||||||    
T  2118378 aattatcatttttgttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaattgcagttttag 2118454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 4220019 - 4219943
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttc-aactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||| |||| || |||| ||||||||| ||||||||||    
T  4220019 aattatcatttttgttgcatttttcgtcctacctcctattttcaaacttcaaaaacgcagagaaataacagttttag 4219943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 202
Target Start/End: Original strand, 28166099 - 28166163
Alignment:
Q  139 tttttgcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacagtttta 202  Q
    |||||||||||||||||||| || ||||||||||||| || |||| || |||||||| |||||||    
T  28166099 tttttgcagttttagtcctatctccctattttcaactacaaaaacgcacagaaatgatagtttta 28166163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 33109769 - 33109848
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||||||| ||| ||||| |||| |||||||| || |||||   ||||| |||| ||||||||||||||||||||||||    
T  33109769 aattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacct 33109848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 18751698 - 18751760
Alignment:
Q  142 ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||| |||| |||| ||||||||||||||| |||||||||| |||| ||||| |||||||||    
T  18751698 ttgcatttttcgtcccacctcctattttcaaactccagaaacgcagaaaaatggcagttttag 18751760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 203
Target Start/End: Original strand, 34789445 - 34789542
Alignment:
Q  107 aaatcgaacaaaatcatacctaaattatcatgtttt-tgcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||| | | |||| ||| ||||||| |||||||||||||||| || |||||||  |||||||||||| || | |||||||| ||||||    
T  34789445 aaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcctatctccctatttcaaactccagaaacgcacataaatgacaattttag 34789542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 45838604 - 45838705
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgtttt-tgcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| ||||||||||||||| | |||||| ||| ||||||| |||||||||||||||| || ||||||| | ||| || |||| || |||||||| |||    
T  45838604 tcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgcagttttagtcctatctccctatttcctacttcaaaaacgcacagaaatgatagt 45838702  T
Q  199 ttt 201  Q
    |||    
T  45838703 ttt 45838705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 143
Target Start/End: Complemental strand, 51310038 - 51309952
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt 143  Q
    |||||||| || |||||| |||||||||  ||||| ||  ||| |||||||||||||||||||   | |||||| ||||||||||||    
T  51310038 ttttggtcctcgcatttttaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaacagtccctaaactatcatgttttt 51309952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 54441052 - 54440955
Alignment:
Q  107 aaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||| | | |||| ||| |||||||| ||||||||||||||| || ||||||| ||||||||||||| ||    ||||||||||||||    
T  54441052 aaatcgaacaaaatcgtccttaaactat-atgttttttgcagttttagtcctatctccctatttccaactccagaaacgcacgtcaatgacagttttag 54440955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 6617151 - 6617070
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcctacct-cctattttcaactccagaaa 181  Q
    ||||| |||||||| |||||| | |||||| |||  | |||||||||||||||||||| || ||||| | ||||||||||||    
T  6617151 tcttttaaatcgaataaaatcgtccctaaactatattttttttgcagttttagtcctatctccctatctccaactccagaaa 6617070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 205
Target Start/End: Complemental strand, 22170397 - 22170320
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagac 205  Q
    ||||||||| ||| ||||| |||| |||||||| || |||||   ||||| |||| ||||||||||||||||||||||    
T  22170397 aattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagac 22170320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 41114254 - 41114319
Alignment:
Q  139 tttttgcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||||| || || ||||||| |||||| |||||| || |||||||||| ||||||    
T  41114254 tttttgcagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacaattttag 41114319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 9e-26; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 57 - 207
Target Start/End: Original strand, 28876916 - 28877067
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagtttt-agtc 155  Q
    |||||||| || |||||||| |||||||  |||||  |||||| ||||||||||||||||||||| | |||||| ||||||||||||| |||||| | ||    
T  28876916 ttttggtcctcgcattttgatcagctcacgaaaataattctgcctctttcaaatcgaacaaaatcgtccctaaactatcatgtttttgtagttttaaatc 28877015  T
Q  156 ctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
     ||| || |||||||||||| |||||| |||||||| || || |||||||||    
T  28877016 ttacttcttattttcaactcaagaaacgcagagaaacgatagctttagacct 28877067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 18805266 - 18805324
Alignment:
Q  147 gttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagac 205  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18805266 gttttagtcctacctcctatcttcaactccagaaacacagagaaatgacagttttagac 18805324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 35427345 - 35427198
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcc 156  Q
    |||||||| || ||||||||||| ||||  ||||| ||||| | ||||| ||| ||||||||||| | ||||||||||    ||||||||||||||||||    
T  35427345 ttttggtcctcgcattttgaccaactcacgaaaatggttctacctcttttaaaccgaacaaaatcgtccctaaattatatattttttgcagttttagtcc 35427246  T
Q  157 tacct-cctattttcaactccagaaacacagagaaatgacagttttag 203  Q
     | || ||||||| |||||||| |||| || |||||||||||||||||    
T  35427245 catctccctatttccaactccataaacgcacagaaatgacagttttag 35427198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 599589 - 599692
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatg-tttttgcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| ||||||||||||||||| |||||||||| ||| ||||||||||||||||| || || ||||||| ||||||||||||| || | ||||||||||    
T  599589 tcttttaaatcgaacaaaatcatccctaaattat-atgttttttgcagttttagtcatatctccctatttccaactccagaaacgcacacaaatgacagt 599687  T
Q  199 tttag 203  Q
    |||||    
T  599688 tttag 599692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 41260750 - 41260647
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| ||||||||||||||| | |||||| ||| |||||||| ||||||||||||||| |||| ||||||||||||||||||| || | ||||||||||    
T  41260750 tcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgcagttttagtcctatctccctattttcaactccagaaacgcacataaatgacagt 41260652  T
Q  199 tttag 203  Q
    |||||    
T  41260651 tttag 41260647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 69 - 203
Target Start/End: Complemental strand, 7911137 - 7911002
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcctacctc-ctatt 167  Q
    ||||||||||| ||||  ||||| ||||| | ||||| ||||||||||||||| | |||||| |||    ||||||||||||||||| || | | |||||    
T  7911137 cattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccctaaactatatattttttgcagttttagtcatatccctctatt 7911038  T
Q  168 ttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||| |||| || |||||||||||||||||    
T  7911037 ttcaactccataaacgcacagaaatgacagttttag 7911002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 28254915 - 28254812
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagtt 199  Q
    ||||| ||||||||||||||| | |||||| |||    |||||||||||||||||||| |||| ||||| ||||||||||||| || |||||||||||||    
T  28254915 tcttttaaatcgaacaaaatcgtccctaaactatataatttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtt 28254816  T
Q  200 ttag 203  Q
    ||||    
T  28254815 ttag 28254812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 57 - 207
Target Start/End: Complemental strand, 28877422 - 28877272
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtc 155  Q
    |||||||| || ||||||||||| ||||  ||||| ||| | | |||||||||| |||||||||  | ||||| | ||||||||||| || |||||||||    
T  28877422 ttttggtcctcgcattttgaccaactcacgaaaatggttatacctctttcaaattgaacaaaattgtccctaact-atcatgttttttgctgttttagtc 28877324  T
Q  156 ctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    |||||| ||||||| ||||||||||||  | | |||||||| ||||||||||    
T  28877323 ctaccttctatttttaactccagaaacgtatataaatgacaattttagacct 28877272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 69 - 203
Target Start/End: Original strand, 9796751 - 9796886
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tat 166  Q
    ||||||||||| |||| |||| | || || | ||||| ||||||||||||||||| | |||| ||| |||||||| |||||||||||| || |||| |||    
T  9796751 cattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcatccataaactat-atgttttttgcagttttagtcatatctccctat 9796849  T
Q  167 tttcaactccagaaacacagagaaatgacagttttag 203  Q
    || |||||||| |||| || |||||||||||||||||    
T  9796850 ttccaactccataaacgcacagaaatgacagttttag 9796886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 69 - 202
Target Start/End: Original strand, 18049615 - 18049750
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatg--tttttgcagttttagtcctacct-ccta 165  Q
    ||||||||||| ||||  ||||| |||||   | ||| ||||||||||||||| | | |||| ||| |||  |||||||||||||||||||| || ||||    
T  18049615 cattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttttttgcagttttagtcctatctcccta 18049713  T
Q  166 ttttcaactccagaaacacagagaaatgacagtttta 202  Q
    ||| ||||||||||||| || ||||||||||||||||    
T  18049714 tttccaactccagaaacgcacagaaatgacagtttta 18049750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 13225099 - 13225023
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||||| |||||||||| |||||||||| |||||||||    
T  13225099 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 13225023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 26252866 - 26252969
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgtttt-tgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| ||||||||||||||| | |||||| ||| ||||||| |||||||||||||||| |||| ||||| ||||||||||||| |  |||||||||||     
T  26252866 tcttttaaatcgaacaaaatcgtccctaaactat-atgttttgtgcagttttagtcctatctccctatttccaactccagaaacgctcagaaatgacaga 26252964  T
Q  199 tttag 203  Q
    |||||    
T  26252965 tttag 26252969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 203
Target Start/End: Original strand, 42035785 - 42035932
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgt-ttttgcagttttagtc 155  Q
    |||||||| |||||||||||||| ||||  ||||| ||||| | ||||| ||||||||||||||| | | |||| ||| || | ||||||| ||||||||    
T  42035785 ttttggtcctcacattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactat-atatattttgcaattttagtc 42035883  T
Q  156 ctacct-cctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||| || |||||||  ||||||| |||| || | |||||||||||||||    
T  42035884 ctatctccctatttctaactccataaacgcacaaaaatgacagttttag 42035932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 101 - 202
Target Start/End: Complemental strand, 18050080 - 18049978
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| ||||||||||||||| | |||||| ||| |||||||| || |||||| ||||| |||| ||||||||||||||||||| || |||||| |||||    
T  18050080 tcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgctgttttaatcctatctccctattttcaactccagaaacgcacagaaataacagt 18049982  T
Q  199 ttta 202  Q
    ||||    
T  18049981 ttta 18049978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 5731295 - 5731198
Alignment:
Q  107 aaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||| | | |||| ||| |||||||| ||||||||||| ||| |||| ||||||||||||||||||| || | |||||||||||||||    
T  5731295 aaatcgaacaaaatcgtccataaactat-atgttttttgcagttttagttctatctccctattttcaactccagaaacgcacataaatgacagttttag 5731198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 6115600 - 6115496
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt--gcagttttagtcctacctcct-attttcaactccagaaacacagagaaatgacag 197  Q
    ||||| ||||||||||||||| | |||||| ||| ||||||||  | ||||||||| ||| ||||| ||||||||||| |||||| || |||||||||||    
T  6115600 tcttttaaatcgaacaaaatcgtccctaaactat-atgtttttttgtagttttagttctatctccttattttcaactcaagaaacgcacagaaatgacag 6115502  T
Q  198 ttttag 203  Q
    ||||||    
T  6115501 ttttag 6115496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 203
Target Start/End: Complemental strand, 16578583 - 16578482
Alignment:
Q  103 tttcaaatcgaacaaaatcatacctaaattatcatg-tttttgcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacagttt 200  Q
    |||||||||||||||||||||   |||| ||| ||| |||||||||||||||||||| || ||||||| |||| | |||||| || ||||||||||||||    
T  16578583 tttcaaatcgaacaaaatcatcattaaactat-atgttttttgcagttttagtcctatctccctatttccaacactagaaacgcacagaaatgacagttt 16578485  T
Q  201 tag 203  Q
    |||    
T  16578484 tag 16578482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 5730912 - 5730977
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||| ||||||||||||||||| |||||| ||||||||||||  | |||||||||||||||||    
T  5730912 tttttgctgttttagtcctacctccctatttttaactccagaaacgtacagaaatgacagttttag 5730977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 28254521 - 28254586
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||| |||| ||||| ||||||||||||| || |||||||||| ||||||    
T  28254521 tttttgcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacatttttag 28254586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 33743021 - 33743082
Alignment:
Q  143 tgcagttttagtcctacctcctattttca-actccagaaacacagagaaatgacagttttag 203  Q
    |||| |||| ||||||||||||||||||| || |||||||| ||||||||||||||||||||    
T  33743021 tgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 33743082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 9928994 - 9929070
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||| ||||||| |||||||||| |||||||||| |||||||||    
T  9928994 aattatcatttttgttgcatttttcgtcctacctccttttttcaaactccagaaacgcagagaaatgtcagttttag 9929070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 11656917 - 11656841
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttc-aactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||| |||||||||||| |||||||||  |||||||||    
T  11656917 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatagcagttttag 11656841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 12572311 - 12572235
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttc-aactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||| |||||||||||| |||||||||  |||||||||    
T  12572311 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaattgcagttttag 12572235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 19176375 - 19176451
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||| ||||||||||||||| |||||||||| ||||||||||||| ||||||    
T  19176375 aattatcatttttgttgcatttttcgtccgacctcctattttcaaactccagaaacgcagagaaatgacaattttag 19176451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 16578165 - 16578247
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatg-tttttgcagttttagtcctacct-cctattttcaactccagaaac 182  Q
    ||||| ||||||||||||||| | |||||||||| ||| ||||||||||||| |||||| || ||||||| |||||||||||||    
T  16578165 tcttttaaatcgaacaaaatcgtccctaaattat-atgttttttgcagttttggtcctatctccctatttccaactccagaaac 16578247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 44831333 - 44831408
Alignment:
Q  130 attatcatgttt-ttgcagttttagtcctacctcctattttc-aactccagaaacacagagaaatgacagttttag 203  Q
    |||||||| ||| ||||| |||| |||||||||||||||||| ||||||| |||| ||||||||||| ||||||||    
T  44831333 attatcatttttgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgatagttttag 44831408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 44831705 - 44831626
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||||||| ||| ||||| |||| |||||||| || |||||   ||||| |||||||||||||||||||||||||||||    
T  44831705 aattatcatttttgttgcatttttggtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacct 44831626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 57 - 203
Target Start/End: Original strand, 34799092 - 34799240
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatg--tttttgcagttttagt 154  Q
    ||||||||||  ||||||||||| ||||| ||||| || ||  || ||| |||||||||||| || | | |||| ||| |||  ||||||||||||||||    
T  34799092 ttttggtcataccattttgaccaactcatgaaaatggtcctattttttttaaatcgaacaaagtcgtccttaaactat-atgtttttttgcagttttagt 34799190  T
Q  155 cctacct-cctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||| || ||||||| |||||||| |||| || | |||||||| ||||||    
T  34799191 cctatctccctatttccaactccataaacgcacataaatgacaattttag 34799240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 599949 - 599884
Alignment:
Q  139 tttttgcagttttagtcctacctc-ctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||||||||| || ||| |||||| ||| ||||||||| || |||||||||||||||||    
T  599949 tttttgcagttttagtcttatctctctatttccaattccagaaacgcatagaaatgacagttttag 599884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 9797177 - 9797112
Alignment:
Q  139 tttttgcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||| ||| || ||||||| |||||||| |||| || |||||||||||||||||    
T  9797177 tttttgcagttttagttctatctacctatttccaactccataaacgcacagaaatgacagttttag 9797112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 18428212 - 18428147
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||| ||||| |||| ||||| ||||||||||||| || | |||||||||||||||    
T  18428212 tttttgcagttttactcctatctccctatttccaactccagaaacgcacaaaaatgacagttttag 18428147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 35693965 - 35694030
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||| |||||||||||||| |||| ||||| ||||||||||||| || | |||||||||||||||    
T  35693965 ttttttcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttag 35694030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 33328600 - 33328524
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||| |||||| |||||||| |||||||||| |||||||||| |||||||||    
T  33328600 aattatcatttttgttgcatttttcgtcccacctcccattttcaaactccagaaacgcagagaaatggcagttttag 33328524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 34799572 - 34799469
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtccta-cctcctattttcaactccagaaacacagagaaatgacagt 198  Q
    ||||| ||||||||||||||  | |||||| ||| |||||||| ||||||||||||||| | |||||||| |||||||| |||| || | |||||| |||    
T  34799572 tcttttaaatcgaacaaaattgtccctaaactat-atgttttttgcagttttagtcctatcttcctatttccaactccataaacgcacataaatgatagt 34799474  T
Q  199 tttag 203  Q
    |||||    
T  34799473 tttag 34799469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 41681594 - 41681518
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| ||||||||| |||||||||| |||||||||| ||||||||||  ||||||||    
T  41681594 aattatcatttttgttgcatttttcgtcctacctgctattttcaaactccagaaacgcagagaaatggtagttttag 41681518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 56 - 143
Target Start/End: Original strand, 7910628 - 7910714
Alignment:
Q  56 tttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatgttttt 143  Q
    ||||||||| ||||||||||| || ||||  ||||| ||| | | ||||| ||||||||||||||| | |||||||||| ||||||||    
T  7910628 tttttggtcctcacattttgatcaactcacgaaaatggttatacctcttttaaatcgaacaaaatcgtccctaaattat-atgttttt 7910714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 4629882 - 4629952
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttc-aactccagaaacacagagaaatgacag 197  Q
    ||||||||| ||| ||||| |||| ||| |||||||||||||| |||||||||||| || |||||||||||    
T  4629882 aattatcatttttattgcatttttcgtcttacctcctattttcaaactccagaaacgcaaagaaatgacag 4629952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 158
Target Start/End: Complemental strand, 10047126 - 10047068
Alignment:
Q  100 ttctttcaaatcgaacaaaatcatacctaaattatcatgtttttgcagttttagtccta 158  Q
    |||||| ||||||||||||||  |  ||||| ||||||||||||||||||||| |||||    
T  10047126 ttcttttaaatcgaacaaaatggtctctaaactatcatgtttttgcagttttaatccta 10047068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 15255910 - 15255987
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgtttt-tgcagttttagtcctacct-cctattttcaactcca 177  Q
    ||||| ||||||||||||||| | |||||| ||| ||||||| |||||||||||||||| || ||||||| ||||||||    
T  15255910 tcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgcagttttagtcctatctccctatttccaactcca 15255987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 34541008 - 34540934
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttc-aactccagaaacacagagaaatgacagtttt 201  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||| ||||  |||||| ||||||||||| ||||||    
T  34541008 aattatcatttttgttgcatttttcgtcctacctcctattttcaaacttaagaaacgcagagaaatgatagtttt 34540934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 42036261 - 42036157
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt--gcagttttagtcctac-ctcctattttcaactccagaaacacagagaaatgacag 197  Q
    ||||| ||||||||||||||| | |||||| ||| ||||||||  |||||||||||| ||  ||| ||||| ||||||||||||  || | |||||||||    
T  42036261 tcttttaaatcgaacaaaatcgtccctaaactat-atgtttttttgcagttttagtcgtattctcatatttccaactccagaaatgcacaaaaatgacag 42036163  T
Q  198 ttttag 203  Q
    ||||||    
T  42036162 ttttag 42036157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 15256279 - 15256214
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||||| ||||| || |||| ||||| ||||||||||||| || |||||||||| ||||||    
T  15256279 tttttgcagttctagtcatatctccctatttccaactccagaaacgcacagaaatgacaattttag 15256214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 31133666 - 31133605
Alignment:
Q  142 ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagtttta 202  Q
    ||||| |||| ||| |||||||||||||||| |||||||||  |||||||||||| ||||||    
T  31133666 ttgcatttttcgtcatacctcctattttcaaactccagaaatgcagagaaatgacggtttta 31133605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 35426908 - 35426973
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||| ||||| ||||| |||| ||||| |||||||| |||| || |||||||||||||||||    
T  35426908 tttttgcaattttactcctatctccctatttccaactccataaacgcacagaaatgacagttttag 35426973  T

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Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 35694321 - 35694256
Alignment:
Q  139 tttttgcagttttagtcctacctcc-tattttcaactccagaaacacagagaaatgacagttttag 203  Q
    ||||||| ||||||||| || |||| ||||| ||||||||||||| || | |||||||||||||||    
T  35694321 tttttgctgttttagtcttatctccctatttccaactccagaaacgcacataaatgacagttttag 35694256  T

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Target: scaffold0712 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 6885 - 6777
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt--gcagttttagtcctacct-----cctattttcaactccagaaacacagagaaatg 193  Q
    ||||| ||||||||||||||| |||||||| || |||||||||  ||||||||||||||||||     ||||||||||||||||||||| || |||||||    
T  6885 tcttttaaatcgaacaaaatcgtacctaaacta-catgtttttttgcagttttagtcctacctatctccctattttcaactccagaaacgcacagaaatg 6787  T
Q  194 acagttttag 203  Q
    ||||||||||    
T  6786 acagttttag 6777  T

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Target: scaffold0712; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 107 - 202
Target Start/End: Original strand, 6455 - 6551
Alignment:
Q  107 aaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacagtttta 202  Q
    ||||||||||||||| | | |||||||| |||||||| ||||||||||||||| || ||||||| ||||| ||||||| || ||||||||||||||||    
T  6455 aaatcgaacaaaatcgtccttaaattat-atgttttttgcagttttagtcctatcttcctatttccaacttcagaaacgcacagaaatgacagtttta 6551  T

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Target: scaffold0709 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 6903 - 6795
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt--gcagttttagtcctacct-----cctattttcaactccagaaacacagagaaatg 193  Q
    ||||| ||||||||||||||| |||||||| || |||||||||  ||||||||||||||||||     ||||||||||||||||||||| || |||||||    
T  6903 tcttttaaatcgaacaaaatcgtacctaaacta-catgtttttttgcagttttagtcctacctatctccctattttcaactccagaaacgcacagaaatg 6805  T
Q  194 acagttttag 203  Q
    ||||||||||    
T  6804 acagttttag 6795  T

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Target: scaffold0709; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 107 - 202
Target Start/End: Original strand, 6473 - 6569
Alignment:
Q  107 aaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacct-cctattttcaactccagaaacacagagaaatgacagtttta 202  Q
    ||||||||||||||| | | |||||||| |||||||| ||||||||||||||| || ||||||| ||||| ||||||| || ||||||||||||||||    
T  6473 aaatcgaacaaaatcgtccttaaattat-atgttttttgcagttttagtcctatcttcctatttccaacttcagaaacgcacagaaatgacagtttta 6569  T

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Target: scaffold0951 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 2127 - 2051
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||||| |||||||||| ||||||||||| ||||||||    
T  2127 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 2051  T

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Target: scaffold0951; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 1752 - 1831
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||||||| ||| ||||| |||| |||||||| || |||||   ||||| |||| ||||||||||||||||||||||||    
T  1752 aattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacct 1831  T

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Target: scaffold0157 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 16956 - 16880
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||||| |||||||||| ||||||||| ||||||||||    
T  16956 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaattacagttttag 16880  T

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Target: scaffold0027 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 42254 - 42334
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttagacct 207  Q
    ||||||||| ||| ||||| |||| ||| |||||||||||||||| || ||||||| ||||||||||||||||||||||||    
T  42254 aattatcatttttgttgcattttttgtcatacctcctattttcaaacttcagaaacgcagagaaatgacagttttagacct 42334  T

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Target: scaffold0097 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 203
Target Start/End: Original strand, 46279 - 46427
Alignment:
Q  57 ttttggtcatcacattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacctaaattatcatg--tttttgcagttttagt 154  Q
    |||||||| || ||||||||||| || |  ||||| ||||| | ||||| ||||||||||||||||| |||||| ||| |||  ||||||||||||||||    
T  46279 ttttggtcctcgcattttgaccaacttacgaaaatggttctacctcttttaaatcgaacaaaatcatccctaaactat-atgtttttttgcagttttagt 46377  T
Q  155 cctacct-cctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    | || || ||||||| ||| |||| |||  || | |||||||||||||||    
T  46378 catatctccctatttccaattccataaatgcacaaaaatgacagttttag 46427  T

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Target: scaffold0021 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 182
Target Start/End: Complemental strand, 159370 - 159288
Alignment:
Q  101 tctttcaaatcgaacaaaatcatacctaaattatcatgttttt-gcagttttagtcctacctcctattttcaactccagaaac 182  Q
    ||||||||||||||||||||| | | |||| |||||| ||||| |||||||||||| |||| |||||||||| ||||| ||||    
T  159370 tctttcaaatcgaacaaaatcgttcataaactatcatattttttgcagttttagtcataccccctattttcacctccaaaaac 159288  T

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Target: scaffold0021; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 182
Target Start/End: Original strand, 159044 - 159159
Alignment:
Q  69 cattttgaccagctcataaaaattgttctgcttctttcaaatcgaacaaaatcatacct--aaattatcatgtttttgcagttttagtcctacctcctat 166  Q
    |||||| |||||||||  |||||  | |||| ||||||||||||||||||| | |  ||  ||| |||| | ||||||||||||||||||||||  ||||    
T  159044 catttttaccagctcacgaaaatgatcctgcctctttcaaatcgaacaaaaccgtctctctaaactatcgtttttttgcagttttagtcctaccctctat 159143  T
Q  167 tttcaactccagaaac 182  Q
    ||||| ||||| ||||    
T  159144 tttcacctccaaaaac 159159  T

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Target: scaffold0273 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 4667 - 4588
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||||||| ||| ||||| |||| |||||||| || |||||   ||||| |||||||||||||||||||||||||||||    
T  4667 aattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacct 4588  T

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Target: scaffold0273; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 4288 - 4364
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| || ||||||||||||||||| ||| | |||  ||||||||||||||||||||    
T  4288 aattatcatttttgttgcatttttcgttctacctcctattttcaaactctaaaaatgcagagaaatgacagttttag 4364  T

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Target: scaffold0025 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 78412 - 78477
Alignment:
Q  139 tttttgcagttttagtcctacctc-ctattttcaactccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||  || |||||||||| ||||||    
T  78412 tttttgcagttttagtcctatctctctatttccaactccagaaatgcatagaaatgacaattttag 78477  T

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Target: scaffold0417 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 11083 - 11007
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttc-aactccagaaacacagagaaatgacagttttag 203  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||| ||||| |||||| |||||||||  |||||||||    
T  11083 aattatcatttttgttgcatttttcgtcctacctcctattttcaaactcgagaaacgcagagaaattgcagttttag 11007  T

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Target: scaffold1223 (Bit Score: 32; Significance: 0.000000004; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 206
Target Start/End: Complemental strand, 1201 - 1122
Alignment:
Q  129 aattatcatgttt-ttgcagttttagtcctacctcctattttcaa-ctccagaaacacagagaaatgacagttttagacc 206  Q
    ||||||||| ||| |||||  ||| |||||||||||||||||||| | |||||||| |||| ||||| ||||||||||||    
T  1201 aattatcatttttgttgcatctttcgtcctacctcctattttcaaaccccagaaacgcagaaaaatggcagttttagacc 1122  T

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Target: scaffold1223; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 205
Target Start/End: Original strand, 838 - 914
Alignment:
Q  129 aattatcatgtttttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagac 205  Q
    ||||||||| || ||||| |||| |||||||| || |||||   ||||| |||| ||||||||| ||||||||||||    
T  838 aattatcattttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagac 914  T

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Target: scaffold0295 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 5224 - 5179
Alignment:
Q  159 cctcctattttcaa-ctccagaaacacagagaaatgacagttttag 203  Q
    |||||||||||||| |||||||||| |||| |||||||||||||||    
T  5224 cctcctattttcaaactccagaaacgcagaaaaatgacagttttag 5179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 207
Target Start/End: Complemental strand, 134119 - 134054
Alignment:
Q  142 ttgcagttttagtcctacctcctattttcaactccagaaacacagagaaatgacagttttagacct 207  Q
    ||||| |||| |||||||| || |||||   ||||| |||| ||||||||||||||||||||||||    
T  134119 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacct 134054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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