View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11867_high_1 (Length: 1545)

Name: NF11867_high_1
Description: NF11867
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11867_high_1
NF11867_high_1
[»] chr7 (49 HSPs)
chr7 (15-496)||(39930810-39931292)
chr7 (913-1209)||(39930151-39930446)
chr7 (45-290)||(36363991-36364236)
chr7 (87-508)||(4937330-4937751)
chr7 (711-859)||(39930500-39930649)
chr7 (544-655)||(39930701-39930812)
chr7 (87-509)||(17721152-17721574)
chr7 (87-495)||(11276463-11276871)
chr7 (87-508)||(29968491-29968912)
chr7 (87-285)||(234863-235061)
chr7 (90-273)||(31423122-31423305)
chr7 (236-341)||(9978664-9978769)
chr7 (87-254)||(47877500-47877666)
chr7 (209-426)||(18768047-18768264)
chr7 (209-281)||(13553613-13553685)
chr7 (90-220)||(37255278-37255408)
chr7 (101-254)||(25018774-25018927)
chr7 (369-426)||(34232500-34232557)
chr7 (351-419)||(19735299-19735367)
chr7 (121-338)||(6335776-6335993)
chr7 (120-265)||(17056079-17056224)
chr7 (369-426)||(33820843-33820900)
chr7 (351-419)||(18671952-18672020)
chr7 (372-426)||(4078079-4078133)
chr7 (209-287)||(32815738-32815816)
chr7 (209-278)||(34457590-34457659)
chr7 (209-289)||(9895537-9895617)
chr7 (351-419)||(36227442-36227510)
chr7 (374-426)||(45993380-45993432)
chr7 (372-419)||(2820012-2820059)
chr7 (375-426)||(13440863-13440914)
chr7 (109-228)||(17504041-17504160)
chr7 (109-228)||(17549054-17549173)
chr7 (109-280)||(19544832-19545003)
chr7 (120-295)||(27218537-27218712)
chr7 (351-426)||(41340330-41340405)
chr7 (368-419)||(45164838-45164889)
chr7 (355-421)||(29917005-29917071)
chr7 (209-273)||(11341435-11341500)
chr7 (209-282)||(23887722-23887795)
chr7 (209-282)||(23898898-23898971)
chr7 (209-280)||(19735157-19735229)
chr7 (209-265)||(22819162-22819218)
chr7 (369-409)||(31423393-31423433)
chr7 (371-419)||(46626623-46626671)
chr7 (368-419)||(6335683-6335734)
chr7 (369-419)||(23054261-23054311)
chr7 (377-426)||(28740219-28740268)
chr7 (1478-1507)||(39929953-39929982)
[»] scaffold0034 (1 HSPs)
scaffold0034 (87-508)||(105045-105466)
[»] chr4 (57 HSPs)
chr4 (87-508)||(23641793-23642214)
chr4 (87-508)||(23647451-23647872)
chr4 (90-508)||(55724909-55725326)
chr4 (87-508)||(47419321-47419742)
chr4 (90-508)||(48312614-48313032)
chr4 (87-508)||(1827742-1828163)
chr4 (87-285)||(19755784-19755982)
chr4 (87-285)||(19783824-19784022)
chr4 (87-285)||(15740737-15740935)
chr4 (87-289)||(46146194-46146396)
chr4 (88-278)||(5789524-5789714)
chr4 (90-281)||(11586627-11586818)
chr4 (90-419)||(54482451-54482779)
chr4 (351-501)||(29553010-29553160)
chr4 (195-419)||(19115061-19115285)
chr4 (195-426)||(26694553-26694784)
chr4 (209-280)||(42952935-42953006)
chr4 (95-419)||(8935599-8935923)
chr4 (369-508)||(19756066-19756205)
chr4 (369-508)||(19783601-19783740)
chr4 (153-419)||(7662599-7662865)
chr4 (351-508)||(19733190-19733347)
chr4 (351-419)||(42952822-42952890)
chr4 (369-419)||(20396381-20396431)
chr4 (369-419)||(42779049-42779099)
chr4 (369-426)||(34976740-34976797)
chr4 (375-508)||(55299426-55299559)
chr4 (101-281)||(7099013-7099193)
chr4 (371-419)||(10562615-10562663)
chr4 (721-854)||(34774688-34774819)
chr4 (208-280)||(43516178-43516250)
chr4 (209-271)||(51072132-51072194)
chr4 (373-426)||(2072343-2072396)
chr4 (168-289)||(19733402-19733523)
chr4 (375-508)||(23872679-23872812)
chr4 (374-419)||(43516039-43516084)
chr4 (364-419)||(40688874-40688930)
chr4 (368-419)||(19162460-19162511)
chr4 (101-184)||(19162703-19162786)
chr4 (87-134)||(19735311-19735358)
chr4 (369-408)||(53486231-53486270)
chr4 (383-426)||(55464165-55464208)
chr4 (233-291)||(25136067-25136125)
chr4 (207-324)||(23872862-23872979)
chr4 (91-184)||(36183058-36183151)
chr4 (122-254)||(38296258-38296390)
chr4 (369-409)||(15741019-15741059)
chr4 (95-135)||(23657822-23657862)
chr4 (210-245)||(13841794-13841829)
chr4 (375-426)||(20675840-20675891)
chr4 (372-419)||(29328072-29328119)
chr4 (101-184)||(40688597-40688680)
chr4 (369-419)||(38296504-38296554)
chr4 (198-295)||(5633850-5633947)
chr4 (378-419)||(19648503-19648544)
chr4 (209-274)||(48805617-48805682)
chr4 (207-324)||(55299249-55299366)
[»] chr3 (61 HSPs)
chr3 (87-508)||(2364794-2365216)
chr3 (87-508)||(34332017-34332438)
chr3 (74-508)||(962365-962799)
chr3 (87-508)||(19919431-19919852)
chr3 (87-285)||(10322996-10323194)
chr3 (90-508)||(19891197-19891615)
chr3 (90-289)||(48569460-48569659)
chr3 (87-287)||(3141368-3141568)
chr3 (87-285)||(16179464-16179662)
chr3 (93-289)||(12341676-12341872)
chr3 (101-271)||(52250564-52250733)
chr3 (209-426)||(15481042-15481259)
chr3 (84-293)||(20531470-20531677)
chr3 (369-505)||(48569228-48569364)
chr3 (122-278)||(48930278-48930434)
chr3 (351-508)||(17077499-17077656)
chr3 (209-509)||(36709549-36709848)
chr3 (209-426)||(46907954-46908171)
chr3 (209-281)||(21739952-21740024)
chr3 (209-280)||(14863895-14863966)
chr3 (209-419)||(22734014-22734224)
chr3 (209-281)||(10868242-10868314)
chr3 (351-426)||(24925969-24926044)
chr3 (120-295)||(31675481-31675656)
chr3 (120-246)||(6825372-6825498)
chr3 (352-426)||(42674722-42674796)
chr3 (351-419)||(14863747-14863815)
chr3 (351-419)||(21739779-21739847)
chr3 (101-281)||(25024273-25024453)
chr3 (207-295)||(34830030-34830118)
chr3 (101-184)||(8130482-8130565)
chr3 (120-295)||(31920766-31920941)
chr3 (122-280)||(40513154-40513312)
chr3 (209-319)||(45684815-45684925)
chr3 (369-426)||(23819364-23819421)
chr3 (140-265)||(44888474-44888599)
chr3 (351-408)||(50545024-50545081)
chr3 (372-409)||(52907343-52907380)
chr3 (374-419)||(53942050-53942095)
chr3 (215-291)||(23604008-23604084)
chr3 (369-417)||(36731692-36731740)
chr3 (207-294)||(30166760-30166847)
chr3 (369-408)||(43120976-43121015)
chr3 (207-289)||(3271119-3271201)
chr3 (368-418)||(8130771-8130821)
chr3 (369-415)||(10868443-10868489)
chr3 (369-419)||(18381847-18381897)
chr3 (375-508)||(6175679-6175812)
chr3 (374-419)||(31675735-31675780)
chr3 (374-419)||(40513015-40513060)
chr3 (209-281)||(1231653-1231725)
chr3 (371-419)||(16672312-16672360)
chr3 (371-419)||(30166614-30166662)
chr3 (209-265)||(31548017-31548073)
chr3 (381-472)||(1709592-1709683)
chr3 (369-508)||(16179739-16179878)
chr3 (364-419)||(25388163-25388218)
chr3 (372-419)||(47538069-47538116)
chr3 (368-419)||(55367407-55367458)
chr3 (140-254)||(17077754-17077868)
chr3 (209-282)||(55367249-55367321)
[»] chr1 (46 HSPs)
chr1 (87-508)||(6051120-6051541)
chr1 (140-285)||(35541604-35541749)
chr1 (87-281)||(47622506-47622700)
chr1 (209-419)||(49264256-49264465)
chr1 (209-419)||(20796296-20796509)
chr1 (369-426)||(26721432-26721489)
chr1 (371-419)||(7396011-7396059)
chr1 (209-281)||(39430916-39430988)
chr1 (207-295)||(45795912-45796000)
chr1 (371-426)||(17708859-17708914)
chr1 (153-324)||(32352696-32352867)
chr1 (369-508)||(47622279-47622418)
chr1 (390-508)||(51052701-51052819)
chr1 (120-265)||(22191227-22191372)
chr1 (207-272)||(45270878-45270943)
chr1 (376-472)||(33259940-33260036)
chr1 (376-472)||(33280099-33280195)
chr1 (351-419)||(39431067-39431135)
chr1 (374-421)||(28358695-28358742)
chr1 (369-407)||(10710506-10710544)
chr1 (122-275)||(13867268-13867421)
chr1 (375-508)||(32352514-32352647)
chr1 (375-508)||(48072628-48072761)
chr1 (374-426)||(3074548-3074600)
chr1 (120-295)||(3544516-3544691)
chr1 (376-419)||(5809387-5809430)
chr1 (369-428)||(35541833-35541892)
chr1 (209-295)||(1248001-1248087)
chr1 (369-419)||(19014274-19014324)
chr1 (375-469)||(22191023-22191117)
chr1 (141-271)||(33142652-33142782)
chr1 (374-419)||(3544392-3544437)
chr1 (375-408)||(5497891-5497924)
chr1 (209-254)||(15174746-15174791)
chr1 (374-419)||(25504283-25504328)
chr1 (209-281)||(13112717-13112789)
chr1 (209-245)||(26131910-26131946)
chr1 (371-419)||(45271042-45271090)
chr1 (375-418)||(5283169-5283212)
chr1 (195-325)||(25504379-25504509)
chr1 (369-419)||(48434949-48434999)
chr1 (209-254)||(3074384-3074429)
chr1 (374-415)||(13867135-13867176)
chr1 (374-419)||(20987959-20988004)
chr1 (209-254)||(21405476-21405521)
chr1 (209-254)||(44692059-44692104)
[»] scaffold1350 (1 HSPs)
scaffold1350 (84-508)||(58-482)
[»] chr5 (57 HSPs)
chr5 (87-508)||(42514237-42514658)
chr5 (74-289)||(33170162-33170377)
chr5 (87-508)||(30731516-30731937)
chr5 (87-506)||(23238900-23239319)
chr5 (87-285)||(27116598-27116796)
chr5 (87-500)||(28534886-28535298)
chr5 (87-285)||(42928648-42928846)
chr5 (95-508)||(27796009-27796422)
chr5 (87-288)||(35983213-35983414)
chr5 (87-502)||(8299391-8299805)
chr5 (109-419)||(10780740-10781050)
chr5 (73-419)||(22094540-22094887)
chr5 (87-254)||(31642028-31642195)
chr5 (209-426)||(38358106-38358323)
chr5 (140-502)||(25856647-25857009)
chr5 (101-278)||(41590627-41590804)
chr5 (140-289)||(27165386-27165535)
chr5 (101-278)||(4297741-4297918)
chr5 (351-419)||(19506779-19506847)
chr5 (351-426)||(35121972-35122047)
chr5 (237-419)||(26261609-26261790)
chr5 (369-426)||(20208004-20208061)
chr5 (369-426)||(30509307-30509364)
chr5 (369-426)||(30549650-30549707)
chr5 (372-416)||(6885715-6885759)
chr5 (369-424)||(6050039-6050094)
chr5 (195-281)||(35122135-35122221)
chr5 (103-280)||(380434-380611)
chr5 (381-426)||(380712-380757)
chr5 (120-249)||(476763-476892)
chr5 (198-323)||(30509434-30509559)
chr5 (198-323)||(30549774-30549899)
chr5 (87-135)||(27165525-27165573)
chr5 (351-426)||(588288-588363)
chr5 (207-325)||(10486304-10486423)
chr5 (369-508)||(33170457-33170596)
chr5 (101-184)||(36256309-36256392)
chr5 (87-165)||(12825716-12825794)
chr5 (209-294)||(26262292-26262377)
chr5 (369-419)||(42260081-42260131)
chr5 (373-426)||(22438021-22438074)
chr5 (371-419)||(21084682-21084730)
chr5 (371-426)||(29572154-29572209)
chr5 (371-426)||(29573531-29573586)
chr5 (371-426)||(29574908-29574963)
chr5 (371-426)||(29576285-29576340)
chr5 (371-426)||(29577662-29577717)
chr5 (371-426)||(29579039-29579094)
chr5 (207-294)||(34481585-34481672)
chr5 (368-419)||(36256573-36256624)
chr5 (95-181)||(15862206-15862292)
chr5 (229-291)||(41925734-41925796)
chr5 (95-181)||(42039234-42039320)
chr5 (195-324)||(10460794-10460922)
chr5 (209-289)||(26263407-26263487)
chr5 (213-286)||(38184033-38184106)
chr5 (213-286)||(38214251-38214324)
[»] chr8 (57 HSPs)
chr8 (87-508)||(7924903-7925324)
chr8 (231-509)||(14345121-14345398)
chr8 (87-509)||(9923118-9923540)
chr8 (87-285)||(8300320-8300518)
chr8 (87-508)||(41664570-41664991)
chr8 (87-285)||(172464-172662)
chr8 (90-508)||(13878689-13879107)
chr8 (87-296)||(20824816-20825025)
chr8 (90-289)||(25090907-25091105)
chr8 (157-508)||(32267141-32267492)
chr8 (101-278)||(36492912-36493089)
chr8 (90-289)||(17700000-17700199)
chr8 (70-169)||(38046858-38046957)
chr8 (198-419)||(23942715-23942936)
chr8 (140-254)||(12332418-12332532)
chr8 (209-280)||(24794385-24794456)
chr8 (198-419)||(18187774-18187994)
chr8 (140-289)||(43271007-43271155)
chr8 (198-289)||(37434380-37434471)
chr8 (209-419)||(5585328-5585538)
chr8 (369-426)||(6901736-6901793)
chr8 (369-426)||(36157953-36158010)
chr8 (207-419)||(7452989-7453201)
chr8 (209-281)||(11393777-11393849)
chr8 (351-419)||(24794501-24794569)
chr8 (209-281)||(43249234-43249305)
chr8 (91-282)||(37165549-37165740)
chr8 (90-319)||(42176946-42177172)
chr8 (351-426)||(43612469-43612544)
chr8 (33-135)||(43283248-43283350)
chr8 (351-419)||(11393622-11393690)
chr8 (209-293)||(16048333-16048417)
chr8 (369-508)||(8300602-8300741)
chr8 (141-280)||(8902398-8902537)
chr8 (369-419)||(29721202-29721252)
chr8 (369-419)||(45255131-45255181)
chr8 (370-423)||(4991983-4992036)
chr8 (354-423)||(12135007-12135076)
chr8 (364-421)||(28992508-28992565)
chr8 (369-410)||(36025320-36025361)
chr8 (351-403)||(43611498-43611550)
chr8 (101-184)||(4310368-4310451)
chr8 (369-508)||(10530459-10530598)
chr8 (377-419)||(6245891-6245933)
chr8 (211-281)||(10530306-10530376)
chr8 (369-419)||(17659640-17659690)
chr8 (209-291)||(27288715-27288797)
chr8 (374-419)||(25193892-25193937)
chr8 (207-275)||(6245719-6245787)
chr8 (371-419)||(12332649-12332697)
chr8 (371-419)||(36493182-36493230)
chr8 (209-265)||(40366287-40366343)
chr8 (378-505)||(4987270-4987397)
chr8 (369-410)||(8445612-8445653)
chr8 (369-426)||(12341366-12341423)
chr8 (381-426)||(15539868-15539913)
chr8 (372-417)||(26774540-26774585)
[»] scaffold0472 (1 HSPs)
scaffold0472 (87-508)||(3769-4190)
[»] chr2 (43 HSPs)
chr2 (91-289)||(14440265-14440463)
chr2 (87-281)||(28253237-28253431)
chr2 (33-268)||(37445556-37445792)
chr2 (140-319)||(12646091-12646270)
chr2 (90-289)||(33515628-33515827)
chr2 (101-254)||(43310790-43310943)
chr2 (101-250)||(26146746-26146895)
chr2 (209-426)||(28399834-28400051)
chr2 (209-415)||(11233784-11233991)
chr2 (209-419)||(9668297-9668507)
chr2 (351-419)||(8065552-8065620)
chr2 (351-505)||(33515398-33515552)
chr2 (209-295)||(33583842-33583928)
chr2 (198-419)||(35488465-35488687)
chr2 (195-419)||(15018302-15018526)
chr2 (207-419)||(45422157-45422369)
chr2 (369-508)||(12646349-12646488)
chr2 (207-295)||(11196988-11197076)
chr2 (351-409)||(25380695-25380753)
chr2 (369-419)||(33583719-33583769)
chr2 (368-421)||(13416484-13416537)
chr2 (375-508)||(13551387-13551520)
chr2 (368-419)||(6724923-6724974)
chr2 (101-184)||(13416202-13416285)
chr2 (171-294)||(13550718-13550841)
chr2 (171-294)||(13551171-13551294)
chr2 (95-273)||(20004483-20004662)
chr2 (369-508)||(28253528-28253667)
chr2 (372-419)||(44028504-44028551)
chr2 (369-419)||(2207113-2207163)
chr2 (140-268)||(37437559-37437688)
chr2 (207-252)||(15127057-15127102)
chr2 (194-254)||(10689178-10689238)
chr2 (371-419)||(26147016-26147064)
chr2 (207-259)||(42051722-42051774)
chr2 (371-419)||(43311060-43311108)
chr2 (207-279)||(43722474-43722546)
chr2 (372-419)||(20004747-20004794)
chr2 (73-135)||(15018180-15018242)
chr2 (201-247)||(30504774-30504820)
chr2 (369-415)||(43722321-43722367)
chr2 (209-278)||(36804758-36804827)
chr2 (381-426)||(39116301-39116346)
[»] chr6 (52 HSPs)
chr6 (87-508)||(2554123-2554543)
chr6 (87-502)||(17605542-17605957)
chr6 (87-508)||(13938236-13938656)
chr6 (90-281)||(14372420-14372611)
chr6 (90-316)||(10576644-10576870)
chr6 (88-508)||(18681776-18682196)
chr6 (141-285)||(24766839-24766983)
chr6 (140-502)||(21629330-21629692)
chr6 (93-296)||(17577130-17577335)
chr6 (84-157)||(10922067-10922140)
chr6 (351-426)||(21549628-21549703)
chr6 (90-287)||(20882456-20882653)
chr6 (369-426)||(649357-649414)
chr6 (195-419)||(502823-503047)
chr6 (209-281)||(13086178-13086250)
chr6 (140-319)||(15956383-15956561)
chr6 (146-295)||(14843552-14843701)
chr6 (369-409)||(17078368-17078408)
chr6 (215-291)||(17228636-17228712)
chr6 (33-120)||(5041980-5042066)
chr6 (207-254)||(34434897-34434944)
chr6 (369-419)||(11060153-11060203)
chr6 (383-505)||(29824777-29824899)
chr6 (369-410)||(11469372-11469413)
chr6 (351-428)||(12673401-12673478)
chr6 (369-426)||(13563214-13563271)
chr6 (171-324)||(15674430-15674583)
chr6 (351-428)||(24766696-24766773)
chr6 (374-419)||(25351027-25351072)
chr6 (375-508)||(26206138-26206271)
chr6 (351-419)||(1104238-1104306)
chr6 (198-282)||(1104375-1104459)
chr6 (209-281)||(21549487-21549559)
chr6 (375-426)||(15674637-15674688)
chr6 (373-415)||(13086346-13086388)
chr6 (374-419)||(14686299-14686344)
chr6 (374-419)||(14843428-14843473)
chr6 (123-232)||(18588902-18589011)
chr6 (373-410)||(18589140-18589177)
chr6 (95-135)||(5085601-5085641)
chr6 (101-173)||(15602855-15602927)
chr6 (88-280)||(32186201-32186393)
chr6 (372-502)||(17576925-17577055)
chr6 (91-181)||(26514245-26514335)
chr6 (374-419)||(2923634-2923679)
chr6 (127-232)||(7956149-7956254)
chr6 (381-426)||(12687036-12687081)
chr6 (378-419)||(19350752-19350793)
chr6 (74-135)||(24767004-24767065)
chr6 (207-324)||(26205978-26206095)
chr6 (355-408)||(28575763-28575816)
chr6 (195-272)||(33805405-33805482)
[»] scaffold0418 (1 HSPs)
scaffold0418 (153-419)||(8187-8453)
[»] scaffold0131 (2 HSPs)
scaffold0131 (153-338)||(3928-4113)
scaffold0131 (371-426)||(3832-3887)
[»] scaffold0002 (2 HSPs)
scaffold0002 (153-338)||(327507-327692)
scaffold0002 (153-338)||(312053-312238)
[»] scaffold0016 (2 HSPs)
scaffold0016 (140-251)||(28344-28455)
scaffold0016 (371-419)||(28575-28623)
[»] scaffold0179 (2 HSPs)
scaffold0179 (369-426)||(8331-8388)
scaffold0179 (369-426)||(13265-13322)
[»] scaffold0043 (1 HSPs)
scaffold0043 (146-295)||(34024-34173)
[»] scaffold0029 (1 HSPs)
scaffold0029 (153-338)||(134226-134411)
[»] scaffold0007 (1 HSPs)
scaffold0007 (369-426)||(182914-182971)
[»] scaffold0112 (2 HSPs)
scaffold0112 (355-419)||(14952-15016)
scaffold0112 (211-281)||(15090-15160)
[»] scaffold1809 (1 HSPs)
scaffold1809 (362-409)||(1101-1148)
[»] scaffold0309 (1 HSPs)
scaffold0309 (201-280)||(715-794)
[»] scaffold0308 (1 HSPs)
scaffold0308 (195-281)||(17770-17856)
[»] scaffold0026 (2 HSPs)
scaffold0026 (369-423)||(67879-67933)
scaffold0026 (96-181)||(67606-67691)
[»] scaffold0048 (2 HSPs)
scaffold0048 (207-272)||(63737-63802)
scaffold0048 (369-415)||(63595-63641)
[»] scaffold0036 (1 HSPs)
scaffold0036 (209-296)||(2993-3080)
[»] scaffold0250 (1 HSPs)
scaffold0250 (209-271)||(12464-12526)


Alignment Details
Target: chr7 (Bit Score: 403; Significance: 0; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 403; E-Value: 0
Query Start/End: Original strand, 15 - 496
Target Start/End: Complemental strand, 39931292 - 39930810
Alignment:
Q  15 tggacatcacaccaaaaagacacacacgacgcaaaccacccatcactcc-taccttcaaccccatcccggattctcactatctcccaccaccaacaagaa 113  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  39931292 tggacatcataccaaaaagacacacacgacacaaaccacccatcactccctaccttcaaccccatcccgaattctcactatctcccaccaccaacaagaa 39931193  T
Q  114 caacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaac 213  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39931192 caactccggcccccatcctccaaccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaac 39931093  T
Q  214 accatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatccaaga 313  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39931092 accatttacctaacagagcaatattaagctccctcaacctcctaacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatccaaga 39930993  T
Q  314 aattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagacca 413  Q
    |||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  39930992 aattttcctatgtccctcacaccccttccaaaaaaaattattcaataaatattttatggaagagattatacatgatggagctttgaagaaggaaagagca 39930893  T
Q  414 tagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgccaaccagacaa 496  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||    
T  39930892 tagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaagaaaaggaatcagatatgccaaccagacaa 39930810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 227; E-Value: 1e-124
Query Start/End: Original strand, 913 - 1209
Target Start/End: Complemental strand, 39930446 - 39930151
Alignment:
Q  913 aaagaatttattttcccacctccgcgtttctcacgcgccctctgaatttccattattaccttcgattggattatacaatccaacnnnnnnnnn--cagtt 1010  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||           |||||    
T  39930446 aaagaatttcttttcccacctccgtgtttctcacgcgccctctgaatttccattattacctccgattggattatacaatccaacaaaaaaaaaaacagtt 39930347  T
Q  1011 cagattcctaattggtagtacttgcatagccttaatatgcaaaagtaccttttccaccatcaatgttagacctaataacgttcctaatctctcgaagcat 1110  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39930346 cagattcctaattggta---cttgcatagccttaatatgcaaaagtaccttttccaccatcaatgttagacctaataacgttcctaatctctcgaagcat 39930250  T
Q  1111 tactttgatatttttatcttgatttcatttgcagtgagcaatgcattggataacattcatgctaatatctactgggaaggatatttcgcaatgaattct 1209  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  39930249 tactttgatttttttatcttgatttcatttgcagtgagcaatgcattggataacattcatgctcatatctactgggaaggatatttcgcaatgaattct 39930151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 142; E-Value: 8e-74
Query Start/End: Original strand, 45 - 290
Target Start/End: Original strand, 36363991 - 36364236
Alignment:
Q  45 gcaaaccacccatcactcctaccttcaaccccatcccggattctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccat 144  Q
    ||||||||||||||||  |||||| | |||||||||||||||||||||||||||| ||| ||| ||||||||||||||||| ||||||||| |     ||    
T  36363991 gcaaaccacccatcaccactacctcctaccccatcccggattctcactatctccctccatcaagaagaacaacttcggccctcatcctccaactatttat 36364090  T
Q  145 cctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactc 244  Q
    |||||||||| || ||||||||||||||||||| || |||| ||| ||||||||||||||||||||||||||||||||  |||| |||||||||||||||    
T  36364091 cctccacaccttaactagccaccaacaccctacgccccaaaccattaccctccactaacaaacgccaacaccatttactcaacaaagcaatattaaactc 36364190  T
Q  245 cctcaacctcataacccccaaccctccatactcctttctcaaacaa 290  Q
    |||||| ||| ||||||||||||| |||||||||||||||||||||    
T  36364191 cctcaatctcctaacccccaacccaccatactcctttctcaaacaa 36364236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 126; E-Value: 3e-64
Query Start/End: Original strand, 87 - 508
Target Start/End: Complemental strand, 4937751 - 4937330
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||||||||||||||||||||||| |||||| | | |||||||     
T  4937751 ctcacaatctccctccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaag 4937652  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaa 286  Q
    |||| | ||||| |||||| | ||||||||||||||| |||| |||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||     
T  4937651 catccctctccaataacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatactccttcctcat 4937552  T
Q  287 acaaacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacct 386  Q
    ||  | ||||  ||| |  | |||||| ||||| || | | |||||| |||   ||        ||||| || ||| |||  ||||||||||||||||||    
T  4937551 actcaaagaatcccacctaacccaagatatttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacct 4937452  T
Q  387 gatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgcc 486  Q
    |  ||||||||||||||||||||  |||||||| | |||||| | | || |||||| || ||||  | ||||||||||||||| ||||| | | | ||||    
T  4937451 gtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaacgaccaccgaaagataggaaccgactttgcc 4937352  T
Q  487 aaccagacaatctagatttaat 508  Q
    ||||||||||||||||||||||    
T  4937351 aaccagacaatctagatttaat 4937330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 126; E-Value: 3e-64
Query Start/End: Original strand, 711 - 859
Target Start/End: Complemental strand, 39930649 - 39930500
Alignment:
Q  711 caattaacctaaaaatta-acaatacaaattgtataaaataaaaaacaccaacatcatccataataatatttctccaaaacttcaaaaataaggttcaaa 809  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39930649 caattaacctaaaaattatacaatacaaatcgtataaaataaaaaacaccaacatcatccataataatatttctccaaaacctcaaaaataaggttcaaa 39930550  T
Q  810 ctttacaaatcatataaaccaaatggtaattataaatattgatgattttg 859  Q
    || ||||||||||||||||||||||||||||||||||||| |||||||||    
T  39930549 ctctacaaatcatataaaccaaatggtaattataaatattaatgattttg 39930500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 108; E-Value: 2e-53
Query Start/End: Original strand, 544 - 655
Target Start/End: Complemental strand, 39930812 - 39930701
Alignment:
Q  544 caacaatatttattaaaagtaaaaattccaaacctctttggttctaacagtatttatcgtcaagttgcaacgacaaagattaaaagcctaaacactcgtt 643  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39930812 caacaatatttattaaaagtaaaaattccaaacctctttggttctaatagtatttatcgtcaagttgcaacgacaaagattaaaagcctaaacactcgtt 39930713  T
Q  644 gtgttcaaaata 655  Q
    ||||||||||||    
T  39930712 gtgttcaaaata 39930701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 107; E-Value: 6e-53
Query Start/End: Original strand, 87 - 509
Target Start/End: Original strand, 17721152 - 17721574
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||||||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||| |||||||||||||||||||||||||| | | |||||||     
T  17721152 ctcactatctccctccaccatgaagaacaactccggcccccatcctccaaacctccatccgccacaccatacctagccaccaacacctttctccacaaag 17721251  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaa 286  Q
    | ||   ||||| |||||| ||||||||||||||||| |||| ||| | ||||||||| ||||||||| ||||||||||||||||||||||||| |||||    
T  17721252 cttccttctccaataacaaccgccaacaccatttacccaacaaagctaaattaaactctctcaacctcgtaacccccaaccctccatactccttcctcaa 17721351  T
Q  287 acaaacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacct 386  Q
    ||  | || |  ||| |  ||||| |||||||| || |   |||||| |||   ||        ||||| || ||| |||  ||||||||||||||||||    
T  17721352 actcaaagtatcccacctaatccatgaaatttttcttttatcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacct 17721451  T
Q  387 gatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgcc 486  Q
    || ||||||||||| ||||||||  |||||||| | |||||| | | ||   |||| || ||||| | ||||||||| ||||||||||| | | | ||||    
T  17721452 gacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacgaacttaagaagaaccaaacgaccaccaaaagaaaggaaccgactttgcc 17721551  T
Q  487 aaccagacaatctagatttaatg 509  Q
    ||||||||||||||  |||||||    
T  17721552 aaccagacaatctatttttaatg 17721574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 105; E-Value: 1e-51
Query Start/End: Original strand, 87 - 495
Target Start/End: Complemental strand, 11276871 - 11276463
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||||||||||| ||||||  | |||||||| ||| ||||||||||||  |  |||||| ||||||||||||||||||| |||||| | | |||||||     
T  11276871 ctcactatctccctccaccacgacgaacaactccgggccccatcctccaaacctccatccgccacaccatacctagccactaacacctttctccacaaag 11276772  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaa 286  Q
    | || | ||||| |||||| ||||||||||||||||| | || |||||| |||||||||||||||||| ||||||||||||||||||||||||| | |||    
T  11276771 cttccctctccaataacaaccgccaacaccatttacccaccaaagcaatgttaaactccctcaacctcgtaacccccaaccctccatactccttccgcaa 11276672  T
Q  287 acaaacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacct 386  Q
    ||  | || |  ||| |  | |||||| ||||| || | | |||||| |||   ||        ||||| || ||| |||  ||||||||||||||||||    
T  11276671 actcaaagtatcccacctaacccaagatatttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacct 11276572  T
Q  387 gatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgcc 486  Q
    || ||||||||||| ||||||||  |||||||| | |||||| | | ||  ||||| |||||||  | ||||||||||||||||||||| ||| | ||||    
T  11276571 gacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttaggagaatcaaacgaccaccgaaagaaaggaaccaactttgcc 11276472  T
Q  487 aaccagaca 495  Q
    |||||||||    
T  11276471 aaccagaca 11276463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 87 - 508
Target Start/End: Original strand, 29968491 - 29968912
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||||||||||| ||||||  | |||||||| |||||| |||||||||  |  |||||| |||| |||||||||||||| |||||| | | |||||||     
T  29968491 ctcactatctccctccaccacgacgaacaactccggcccgcatcctccaaacctccatccgccacgccatacctagccactaacacctttctccacaaag 29968590  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaa 286  Q
    | || | ||||| |||||| ||||||||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||| | ||     
T  29968591 cttccctctccaataacaaccgccaacaccatttacccaacaaagcaatattaaactccctcaatctcgtaacccccaaccctccatactccttccgcag 29968690  T
Q  287 acaaacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacct 386  Q
    ||  | || |  ||| |  | |||||| ||||| || | | |||||| |||   ||        ||||| || ||| |||  ||||||||||||||||||    
T  29968691 actcaaagtatcccacctaacccaagatatttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacct 29968790  T
Q  387 gatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgcc 486  Q
    || ||||||||||| ||||||||| |||||||| | |||||| | | ||  ||||| || ||||  | ||| |||||||| |||||||| | | | ||||    
T  29968791 gacggagctttgaaaaaggaaagagcatagacaggtagagcagtcaggacggactttagaagaatcaaacggccaccgaaggaaaggaaccgactttgcc 29968890  T
Q  487 aaccagacaatctagatttaat 508  Q
    |||||| |||||||||||||||    
T  29968891 aaccagccaatctagatttaat 29968912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 87 - 285
Target Start/End: Complemental strand, 235061 - 234863
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||||||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||| ||||||||||||||||||| |||||| | | |||||||     
T  235061 ctcactatctccctccaccacgaagaacaactccggcccccatcctccaaacctccatccgccacaccatacctagccactaacacctttcgccacaaag 234962  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctca 285  Q
    | || | ||||| |||||| | ||||||||||||||| |||| ||||||||||||||| | ||||||| |||| |||||||||||||||||||| ||||    
T  234961 cttctctctccaataacaaccaccaacaccatttacccaacaaagcaatattaaactctcgcaacctcgtaactcccaaccctccatactccttcctca 234863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 2e-34
Query Start/End: Original strand, 90 - 273
Target Start/End: Original strand, 31423122 - 31423305
Alignment:
Q  90 actatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcat 189  Q
    |||||||||| | ||||  |||||||||| ||||||||||||||||  |  |||||| ||||||||| |||||||||||||||||||| ||||||| |||    
T  31423122 actatctccctcaaccacgaagaacaactccggcccccatcctccaaaccaccatccgccacaccatgcctagccaccaacaccctacgccacaaaccat 31423221  T
Q  190 caccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccat 273  Q
    | |  || |||||||| |||||||||||||| || |||| |||| | |||||||| ||||||||| |||| |||| ||||||||    
T  31423222 ccctatcaactaacaaccgccaacaccatttccccaacaaagcactgttaaactctctcaacctcctaacacccatccctccat 31423305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 3e-33
Query Start/End: Original strand, 236 - 341
Target Start/End: Complemental strand, 9978769 - 9978664
Alignment:
Q  236 attaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatccaagaaattttcctatgtccctcacac 335  Q
    |||||||||||||||||||||||| |||||||| |||||||||||| | ||||||||||||||||||  |||||||| |||||||||||||||||||||     
T  9978769 attaaactccctcaacctcataacgcccaacccaccatactccttttttaaacaaacagaagaccatgatatccaagtaattttcctatgtccctcacaa 9978670  T
Q  336 cccttc 341  Q
    ||||||    
T  9978669 cccttc 9978664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 87 - 254
Target Start/End: Original strand, 47877500 - 47877666
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||||||||||| ||||||  |||||||||| ||||||| ||||||||  |  |||||| ||||||||||||||||||||||||||   | |||||||     
T  47877500 ctcactatctccctccaccacgaagaacaactccggcccc-atcctccaaacctccatccgccacaccatacctagccaccaacacctgtcgccacaaag 47877598  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctc 254  Q
    | || | ||||| |||||| ||||||||||||||| | |||| ||||||||||||||| |||||||||    
T  47877599 cttccctctccaataacaaccgccaacaccatttatccaacaaagcaatattaaactctctcaacctc 47877666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 209 - 426
Target Start/End: Original strand, 18768047 - 18768264
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatc 308  Q
    |||||||||||||||||  | |||||||||||||||| |||| ||| |||||||||| |||||| |||||||| |  |||| | ||||  ||| ||||||    
T  18768047 ccaacaccatttacctagtaaagcaatattaaactccttcaatctcctaacccccaaacctccaaactcctttttagaacacaaagaatcccaacctatc 18768146  T
Q  309 caagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaa 408  Q
    |||| |||||| |||    |||||| |||   ||        |||||||||||| |||  |||||||||||||||| || ||||||||||||||| ||||    
T  18768147 caagtaatttttctacaatcctcactcccaccccagaaaaaattattcaataaagattcaatggaagagattatacttgttggagctttgaagaaagaaa 18768246  T
Q  409 gaccatagacatgcagag 426  Q
    || |||||||| ||||||    
T  18768247 gagcatagacaggcagag 18768264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 209 - 281
Target Start/End: Complemental strand, 13553685 - 13553613
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactccttt 281  Q
    ||||||||||||| |||||| ||||| ||||||||||||||||||| ||||||||||||| ||| ||||||||    
T  13553685 ccaacaccatttatctaacaaagcaaaattaaactccctcaacctcctaacccccaaccccccagactccttt 13553613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 90 - 220
Target Start/End: Original strand, 37255278 - 37255408
Alignment:
Q  90 actatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcat 189  Q
    |||||||||| ||| ||  | |||||||| | ||||||||||||||  |  |||||| |||||||||||||||||||||||||||||| || |||| |||    
T  37255278 actatctccctccatcacgatgaacaactccagcccccatcctccaaaccaccatccgccacaccatacctagccaccaacaccctacgccccaaaccat 37255377  T
Q  190 caccctccactaacaaacgccaacaccattt 220  Q
    | |  || |||||||| |||||||| |||||    
T  37255378 ccctatcaactaacaaccgccaacatcattt 37255408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 101 - 254
Target Start/End: Complemental strand, 25018927 - 25018774
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccact 200  Q
    ||||||| |||||| |||||| |||||| |||||| || |||| ||||| ||||||| || ||||||||||||||| |||| ||   |   | || |||     
T  25018927 ccaccaagaagaaccacttcgacccccaacctccaacctcccagcctcctcaccatatcttgccaccaacaccctataccataagctactcctcttcacc 25018828  T
Q  201 aacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctc 254  Q
    || ||||||||||||||||| | |||||  |||| |||||||||||||||||||    
T  25018827 aataaacgccaacaccattttcttaacaacgcaacattaaactccctcaacctc 25018774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 369 - 426
Target Start/End: Original strand, 34232500 - 34232557
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||    
T  34232500 atggaagagattatacctgatggagctttgaagaaggaaagcgcatagacaagcagag 34232557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 351 - 419
Target Start/End: Original strand, 19735299 - 19735367
Alignment:
Q  351 ttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||||| ||| |||  ||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  19735299 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagaca 19735367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 121 - 338
Target Start/End: Complemental strand, 6335993 - 6335776
Alignment:
Q  121 ggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccattt 220  Q
    ||||||||||||||| || ||||||   ||||||||||||||| |||||||||| | |||| ||  |  | |  || ||||| || |  |||||||||||    
T  6335993 ggcccccatcctccaacctcccatcgcgcacaccatacctagcaaccaacacccgataccataaccctcctctatctactaataatcttcaacaccattt 6335894  T
Q  221 acctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatccaagaaattttc 320  Q
    ||| ||||  ||   ||| ||||||| ||||  | |||| || ||||| || ||||||||| |||||||||||||   ||| |||| |||||||||||||    
T  6335893 acccaacaatgcctcattgaactcccgcaactgcctaactcctaaccccccgtactcctttttcaaacaaacagacctccaacctacccaagaaattttc 6335794  T
Q  321 ctatgtccctcacacccc 338  Q
    |||||| |||||| ||||    
T  6335793 ctatgttcctcactcccc 6335776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 120 - 265
Target Start/End: Original strand, 17056079 - 17056224
Alignment:
Q  120 cggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatt 219  Q
    ||||||||| || ||| || |||||||||| ||||||| |  ||||||||||||||| |||||| |  | |    || ||||| || | |||||||||||    
T  17056079 cggcccccaaccaccaacctcccatcctcctcaccataacgcgccaccaacaccctataccacatactacccttatcaactaataacctccaacaccatt 17056178  T
Q  220 tacctaacagagcaatattaaactccctcaacctcataacccccaa 265  Q
    |||||||||||| || |||||||||||||| |||| | ||||||||    
T  17056179 tacctaacagagaaacattaaactccctcatcctcctcacccccaa 17056224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 369 - 426
Target Start/End: Complemental strand, 33820900 - 33820843
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||| | ||||||    
T  33820900 atggaagagataatacctgatggagctttgaagaaggaaagaacatagataggcagag 33820843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 419
Target Start/End: Original strand, 18671952 - 18672020
Alignment:
Q  351 ttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    ||||| |||||| |||  |||||||||||||||||||||  ||||||||||||||||||| ||||||||    
T  18671952 ttattaaataaagattcaatggaagagattatacctgatatagctttgaagaaggaaagatcatagaca 18672020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 372 - 426
Target Start/End: Original strand, 4078079 - 4078133
Alignment:
Q  372 gaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    |||||||||||||||||||||||| |||||||||||||  |||||||| ||||||    
T  4078079 gaagagattatacctgatggagctctgaagaaggaaagcgcatagacaggcagag 4078133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 32815816 - 32815738
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaa 287  Q
    ||||||||||||  |||| |||||||||||||||||||||| ||   ||||||||||||| ||| ||||||||| ||||    
T  32815816 ccaacaccatttttctaaaagagcaatattaaactccctcatccggttaacccccaacccaccaaactcctttcccaaa 32815738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 209 - 278
Target Start/End: Complemental strand, 34457659 - 34457590
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcc 278  Q
    |||||||||||||||||  | |||||||||||||||| |||| ||| |||||||||| ||||||| ||||    
T  34457659 ccaacaccatttacctagtaaagcaatattaaactccttcaatctcctaacccccaaacctccatgctcc 34457590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 289
Target Start/End: Original strand, 9895537 - 9895617
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaaca 289  Q
    ||||||||||||||||| || | |||||||||| ||||| ||| || | ||| ||||||||||||||||||| | ||||||    
T  9895537 ccaacaccatttacctagcaaatcaatattaaattcccttaacttcctcaccgccaaccctccatactccttacgcaaaca 9895617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 419
Target Start/End: Complemental strand, 36227510 - 36227442
Alignment:
Q  351 ttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    ||||||| |||| |||  |||||||| |||||||||||||||||||||||||| |||||  ||||||||    
T  36227510 ttattcattaaagattcaatggaagaaattatacctgatggagctttgaagaaagaaagggcatagaca 36227442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 374 - 426
Target Start/End: Original strand, 45993380 - 45993432
Alignment:
Q  374 agagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    ||||||||||||||| |||||||||||||| |||||| |||||||| ||||||    
T  45993380 agagattatacctgacggagctttgaagaaagaaagagcatagacaggcagag 45993432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 372 - 419
Target Start/End: Complemental strand, 2820059 - 2820012
Alignment:
Q  372 gaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    ||||||||||||||||| || |||||||||||||||||| ||||||||    
T  2820059 gaagagattatacctgacggggctttgaagaaggaaagaacatagaca 2820012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 375 - 426
Target Start/End: Original strand, 13440863 - 13440914
Alignment:
Q  375 gagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    ||||||||||||| |||||||||||||||||||||  |||||||| ||||||    
T  13440863 gagattatacctgctggagctttgaagaaggaaagcgcatagacaggcagag 13440914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 228
Target Start/End: Complemental strand, 17504160 - 17504041
Alignment:
Q  109 aagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacg 208  Q
    |||||| ||| |||||||||||||||| || |||||||||| |||| || || ||||||||||| | | |||| | | |||| |  || ||||||| | |    
T  17504160 aagaaccactccggcccccatcctccaacctcccatcctcctcaccgtatctcgccaccaacactcgataccaaagaccatctctatcaactaacatatg 17504061  T
Q  209 ccaacaccatttacctaaca 228  Q
    ||||||||| ||||||||||    
T  17504060 ccaacaccacttacctaaca 17504041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 228
Target Start/End: Original strand, 17549054 - 17549173
Alignment:
Q  109 aagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacg 208  Q
    |||||| ||| |||||||||||||||| || |||||||||| |||| || || ||||||||||| | | |||| | | |||| |  || ||||||| | |    
T  17549054 aagaaccactccggcccccatcctccaacctcccatcctcctcaccgtatctcgccaccaacactcgataccaaagaccatctctatcaactaacatatg 17549153  T
Q  209 ccaacaccatttacctaaca 228  Q
    ||||||||| ||||||||||    
T  17549154 ccaacaccacttacctaaca 17549173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 280
Target Start/End: Complemental strand, 19545003 - 19544832
Alignment:
Q  109 aagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacg 208  Q
    |||||| ||| ||||||||| |||||| || | |  ||||| ||||||| |  | | ||||||||||| |||| ||  |||| |  ||||| ||||  ||    
T  19545003 aagaaccactccggcccccaacctccaacctctctgcctcctcaccatatcgtgtcgccaacaccctataccaaaacccatctctatccaccaacatccg 19544904  T
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctt 280  Q
    |||||||||||| ||||| |  ||| |||||||||||||||||  | | ||||| |||||||||||||||||    
T  19544903 ccaacaccatttgcctaataaggcactattaaactccctcaactgcctgacccctaaccctccatactcctt 19544832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 295
Target Start/End: Complemental strand, 27218712 - 27218537
Alignment:
Q  120 cggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatt 219  Q
    ||||||||| || ||| || |||  ||||| ||||||| || ||||||||||||||| |||| ||  || | |  || |  ||||| |||||||||||||    
T  27218712 cggcccccaaccgccaacctccctgcctcctcaccatatctcgccaccaacaccctataccaaaatccacctctatctatcaacaaccgccaacaccatt 27218613  T
Q  220 tacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacaga 295  Q
    ||||||||| ||| | |||||| | || ||||  | | ||||||| ||||||| |||||||| | |||||||||||    
T  27218612 tacctaacaaagctaaattaaatttccgcaactgcctcacccccagccctccaaactccttttttaaacaaacaga 27218537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 351 - 426
Target Start/End: Original strand, 41340330 - 41340405
Alignment:
Q  351 ttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    ||||| |||||| |||  |||||||||||||||||| | | ||||||||||||||||||  ||||||||| |||||    
T  41340330 ttattaaataaagattcaatggaagagattataccttacgaagctttgaagaaggaaagggcatagacatacagag 41340405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 368 - 419
Target Start/End: Complemental strand, 45164889 - 45164838
Alignment:
Q  368 tatggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    ||||||||||||| |||||| |||||| ||||||||||||||| ||||||||    
T  45164889 tatggaagagattgtacctgctggagccttgaagaaggaaagagcatagaca 45164838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 355 - 421
Target Start/End: Original strand, 29917005 - 29917071
Alignment:
Q  355 tcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagacatg 421  Q
    |||||||| |||  || ||||||||| ||||||| ||||||||||||||||||||  ||||||||||    
T  29917005 tcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacatg 29917071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 273
Target Start/End: Original strand, 11341435 - 11341500
Alignment:
Q  209 ccaacaccatttacctaacagagc-aatattaaactccctcaacctcataacccccaaccctccat 273  Q
    |||||||||||| ||||||| ||| || ||||||||||||||||| | |||||||||| |||||||    
T  11341435 ccaacaccattttcctaacatagctaaaattaaactccctcaaccgcgtaacccccaaacctccat 11341500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 282
Target Start/End: Original strand, 23887722 - 23887795
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttc 282  Q
    |||||||||||| ||||||| ||| ||||||||||||||||||    | ||||||||||||||| |||| ||||    
T  23887722 ccaacaccattttcctaacaaagctatattaaactccctcaactgtctgacccccaaccctccaaactcatttc 23887795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 282
Target Start/End: Original strand, 23898898 - 23898971
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttc 282  Q
    |||||||||||| ||||||| ||| ||||||||||||||||||    | ||||||||||||||| |||| ||||    
T  23898898 ccaacaccattttcctaacaaagctatattaaactccctcaactgtctgacccccaaccctccaaactcatttc 23898971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 19735157 - 19735229
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcat-aacccccaaccctccatactcctt 280  Q
    ||||||||||||||||||||  |||| |||||||| |||||| ||| | ||||| |||||||||| |||||||    
T  19735157 ccaacaccatttacctaacaatgcaaaattaaacttcctcaatctcgtaaaccctcaaccctccagactcctt 19735229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 265
Target Start/End: Complemental strand, 22819218 - 22819162
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaa 265  Q
    ||||||||| || |||||||||| || ||||||||||||||||||| | ||||||||    
T  22819218 ccaacaccacttgcctaacagagaaacattaaactccctcaacctcctcacccccaa 22819162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 369 - 409
Target Start/End: Original strand, 31423393 - 31423433
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaag 409  Q
    |||||||||||||||||||| ||||||||||| ||||||||    
T  31423393 atggaagagattatacctgacggagctttgaaaaaggaaag 31423433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 46626623 - 46626671
Alignment:
Q  371 ggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    ||||||||||||| ||||||||||||||||||| |||||  ||||||||    
T  46626623 ggaagagattatatctgatggagctttgaagaaagaaagggcatagaca 46626671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 419
Target Start/End: Complemental strand, 6335734 - 6335683
Alignment:
Q  368 tatggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    ||||||||||||| ||| || |||||| ||||||||||||||| ||||||||    
T  6335734 tatggaagagattgtacatgctggagccttgaagaaggaaagagcatagaca 6335683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 369 - 419
Target Start/End: Complemental strand, 23054311 - 23054261
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    ||||||||||||||||||||  ||||||| |||||||||||  ||||||||    
T  23054311 atggaagagattatacctgacagagctttaaagaaggaaagtgcatagaca 23054261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 377 - 426
Target Start/End: Complemental strand, 28740268 - 28740219
Alignment:
Q  377 gattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    |||||||||| | ||||||||||||||||||||| |||| ||| ||||||    
T  28740268 gattatacctaagggagctttgaagaaggaaagagcataaacaggcagag 28740219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1478 - 1507
Target Start/End: Complemental strand, 39929982 - 39929953
Alignment:
Q  1478 ctattaataaattgttggtttttacaacaa 1507  Q
    ||||||||||||||||||||||||||||||    
T  39929982 ctattaataaattgttggtttttacaacaa 39929953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 126; Significance: 3e-64; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 126; E-Value: 3e-64
Query Start/End: Original strand, 87 - 508
Target Start/End: Complemental strand, 105466 - 105045
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||||||||||||||||||||||| |||||| | | |||||||     
T  105466 ctcacaatctccctccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaag 105367  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaa 286  Q
    |||| | ||||| |||||| | ||||||||||||||| |||| |||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||     
T  105366 catccctctccaataacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatactccttcctcat 105267  T
Q  287 acaaacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacct 386  Q
    ||  | ||||  ||| |  | |||||| ||||| || | | |||||| |||   ||        ||||| || ||| |||  ||||||||||||||||||    
T  105266 actcaaagaatcccacctaacccaagatatttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacct 105167  T
Q  387 gatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgcc 486  Q
    |  ||||||||||||||||||||  |||||||| | |||||| | | || |||||| || ||||  | ||||||||||||||| ||||| | | | ||||    
T  105166 gtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaacgaccaccgaaagataggaaccgactttgcc 105067  T
Q  487 aaccagacaatctagatttaat 508  Q
    ||||||||||||||||||||||    
T  105066 aaccagacaatctagatttaat 105045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 126; Significance: 3e-64; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 126; E-Value: 3e-64
Query Start/End: Original strand, 87 - 508
Target Start/End: Complemental strand, 23642214 - 23641793
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||||||||||||||||||||||| |||||| | | |||||||     
T  23642214 ctcacaatctccctccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaag 23642115  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaa 286  Q
    |||| | ||||| |||||| | ||||||||||||||| |||| |||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||     
T  23642114 catccctctccaataacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatactccttcctcat 23642015  T
Q  287 acaaacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacct 386  Q
    ||  | ||||  ||| |  | |||||| ||||| || | | |||||| |||   ||        ||||| || ||| |||  ||||||||||||||||||    
T  23642014 actcaaagaatcccacctaacccaagatatttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacct 23641915  T
Q  387 gatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgcc 486  Q
    |  ||||||||||||||||||||  |||||||| | |||||| | | || |||||| || ||||  | ||||||||||||||| ||||| | | | ||||    
T  23641914 gtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaacgaccaccgaaagataggaaccgactttgcc 23641815  T
Q  487 aaccagacaatctagatttaat 508  Q
    ||||||||||||||||||||||    
T  23641814 aaccagacaatctagatttaat 23641793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 118; E-Value: 2e-59
Query Start/End: Original strand, 87 - 508
Target Start/End: Complemental strand, 23647872 - 23647451
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||||||||||||||||||||||| |||||| | | |||||||     
T  23647872 ctcacaatctccctccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaag 23647773  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaa 286  Q
    |||| | ||||| |||||| | ||||||||||||| | |||| |||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||     
T  23647772 catccctctccaataacaacctccaacaccatttatccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatactccttcctcat 23647673  T
Q  287 acaaacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacct 386  Q
    ||  | ||||  ||| |  | |||||| ||||| || | | |||||| |||   ||        ||||| || ||| |||  ||||||||||||||||||    
T  23647672 actcaaagaatcccacctaacccaagatatttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacct 23647573  T
Q  387 gatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgcc 486  Q
    |  ||||||||||||||||||||  |||||||| | |||||| | | || |||||| || ||||  | | ||||||||||||| ||||| | | | ||||    
T  23647572 gtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaatgaccaccgaaagataggaaccgactttgcc 23647473  T
Q  487 aaccagacaatctagatttaat 508  Q
    ||||||||||||||||||||||    
T  23647472 aaccagacaatctagatttaat 23647451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 2e-56
Query Start/End: Original strand, 90 - 508
Target Start/End: Complemental strand, 55725326 - 55724909
Alignment:
Q  90 actatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcat 189  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||  |  |||||||||||||||||||||||||||||||||||| |||| ||  |||    
T  55725326 actatctccctccaccaagaagaacaactccggcccccatcctccaaaccaccatcctccacaccatacctagccaccaacaccctataccataatccat 55725227  T
Q  190 caccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaaca 289  Q
    | |  || |||||||| | |||||||||||| ||||||| |||||  |||||||| ||||||||| |||| |||||||||||||||||| | ||||||||    
T  55725226 ctctatctactaacaacctccaacaccatttccctaacaaagcaaagttaaactctctcaacctcctaacacccaaccctccatactccctcctcaaaca 55725127  T
Q  290 aacagaagaccatcctatccaagaaattttcctatgtccctcac-accccttccnnnnnnnnttattcaataaatattttatggaagagattatacctga 388  Q
     | ||||  ||| || |||||||||||||| || | | |||||| |||||  ||        ||||| || ||| |||  ||||||||||||||||| ||    
T  55725126 caaagaattccaaccaatccaagaaatttttcttttttcctcactacccc--ccaaaaaaatttatttaacaaagattcaatggaagagattatacccga 55725029  T
Q  389 tggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgccaa 488  Q
     ||||||||||| ||||||||| |||||||| | ||  || ||| ||  || ||||| ||||  || |||||||| || || ||||| | | ||||||||    
T  55725028 cggagctttgaaaaaggaaagaacatagacaggaagcacatttaggacggatttgagaagaatcaggcgaccaccaaaggagaggaaccgactatgccaa 55724929  T
Q  489 ccagacaatctagatttaat 508  Q
      ||||||||||||||||||    
T  55724928 atagacaatctagatttaat 55724909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 87 - 508
Target Start/End: Original strand, 47419321 - 47419742
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||||||||||||||||||||||| |||||| | | |||||||     
T  47419321 ctcacaatctccctccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaag 47419420  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaa 286  Q
    |||| | |||||  ||||| | |||||||||||||||||||| |||||| ||||||||||||| ||||  |||||||||||||||| ||||||| ||||     
T  47419421 catccctctccaacaacaacctccaacaccatttacctaacaaagcaatgttaaactccctcagcctctgaacccccaaccctccaaactccttcctcat 47419520  T
Q  287 acaaacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacct 386  Q
    ||  | || |  |||||  | |||||| ||||| || | | |||||| |||   ||        ||||| || ||| |||  ||||||||||||||||||    
T  47419521 actcaaagtatcccatctaacccaagatatttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacct 47419620  T
Q  387 gatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgcc 486  Q
    |  ||||||||||||||||| ||  |||||||| | |||||| | | ||  ||||| || ||||  | ||||||||||||||| ||||| | | | ||||    
T  47419621 gtcggagctttgaagaaggagagtgcatagacagggagagcagtcaggaccgactttagtagaatcaaacgaccaccgaaagataggaaccgactttgcc 47419720  T
Q  487 aaccagacaatctagatttaat 508  Q
    ||||||||||||||||||||||    
T  47419721 aaccagacaatctagatttaat 47419742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 99; E-Value: 4e-48
Query Start/End: Original strand, 90 - 508
Target Start/End: Original strand, 48312614 - 48313032
Alignment:
Q  90 actatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcat 189  Q
    |||||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||| |||||||||||||||||||||||||||||| ||||||  | |    
T  48312614 actatctccctccaccacgaagaacaactccggcccccatcctccaaaccaccatccgccacaccatacctagccaccaacaccctacgccacaacccct 48312713  T
Q  190 caccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaaca 289  Q
    | |  || |||||||| ||| |||||||||| |||| || |||||| |||||||| ||||| |||  ||| |||||||| ||||||||| | ||||||||    
T  48312714 ctctatcaactaacaaccgctaacaccatttccctagcaaagcaatgttaaactctctcaatctccgaacacccaaccccccatactccctcctcaaaca 48312813  T
Q  290 aacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacctgat 389  Q
     | ||||  ||| || | |||| | ||||| || | | ||||||| |||  ||        ||||| || ||| |||  ||||||||||||||||||||     
T  48312814 caaagaatgccaaccaacccaaaatatttttcttttttcctcacaacccccccaaaaaaaattatttaacaaagattcaatggaagagattatacctgac 48312913  T
Q  390 ggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgccaac 489  Q
    ||||||||||| ||||||||  |||||||| | || ||| | ||||   | ||||| ||||  ||||||| ||| ||||||||||| | | |||||||||    
T  48312914 ggagctttgaaaaaggaaagtgcatagacaggaagtgcagtcatgacgaatttgagaagaattagacgacgaccaaaagaaaggaaccgactatgccaac 48313013  T
Q  490 cagacaatctagatttaat 508  Q
    |||||||||||| ||||||    
T  48313014 cagacaatctagttttaat 48313032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 87 - 508
Target Start/End: Complemental strand, 1828163 - 1827742
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||||||||||| ||||||| |||||||||| |||||||||||| |||  |  |||||||||||||||||||||||||| |||||| | | |||||||     
T  1828163 ctcactatctcccgccaccaagaagaacaactccggcccccatccgccaaacctccatcctccacaccatacctagccactaacaccttcctccacaaaa 1828064  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaa 286  Q
    ||||   ||||| |||||| ||||||||||||||| | |||| || ||| |||||||| ||||||||| |||||||||  |||||||||||||| ||||     
T  1828063 catccttctccaataacaaccgccaacaccatttatccaacaaagaaatgttaaactctctcaacctcgtaacccccagtcctccatactccttcctcat 1827964  T
Q  287 acaaacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacct 386  Q
    ||  | || |  ||| |  | |||||| ||||| || | | |||||| |||   ||        ||||| || ||| |||  ||||||||||||||||||    
T  1827963 actcaaagtatcccacctaacccaagatatttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacct 1827864  T
Q  387 gatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgcc 486  Q
    || ||||||||||| ||||||||  |||||||| | |||||| | | ||  ||||| || ||||  | ||| ||||||||||| ||||| | | | ||||    
T  1827863 gacggagctttgaaaaaggaaagtgcatagacaggaagagcagtcaggacggactttagaagaatcaaacggccaccgaaagagaggaaccgactttgcc 1827764  T
Q  487 aaccagacaatctagatttaat 508  Q
    ||||||||||||||||||||||    
T  1827763 aaccagacaatctagatttaat 1827742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 5e-41
Query Start/End: Original strand, 87 - 285
Target Start/End: Original strand, 19755784 - 19755982
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||||||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||| ||||||||||||||||||| |||||| | | |||||||     
T  19755784 ctcactatctccctccaccacgaagaacaactccggcccccatcctccaaacctccatccgccacaccatacctagccactaacaccttcctccacaaag 19755883  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctca 285  Q
    | || | ||||| |||||| ||||||||||||||| | |||| |||||| |||||||| ||||||||  |||| |||||||||||||||||||| ||||    
T  19755884 cttccctctccaataacaaccgccaacaccatttatccaacaaagcaatgttaaactctctcaaccttgtaacacccaaccctccatactccttcctca 19755982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 5e-41
Query Start/End: Original strand, 87 - 285
Target Start/End: Complemental strand, 19784022 - 19783824
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||||||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||| ||||||||||||||||||| |||||| | | |||||||     
T  19784022 ctcactatctccctccaccacgaagaacaactccggcccccatcctccaaacctccatccgccacaccatacctagccactaacaccttcctccacaaag 19783923  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctca 285  Q
    | || | ||||| |||||| ||||||||||||||| | |||| |||||| |||||||| ||||||||  |||| |||||||||||||||||||| ||||    
T  19783922 cttccctctccaataacaaccgccaacaccatttatccaacaaagcaatgttaaactctctcaaccttgtaacacccaaccctccatactccttcctca 19783824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 3e-36
Query Start/End: Original strand, 87 - 285
Target Start/End: Original strand, 15740737 - 15740935
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||||||||||| ||||||  |||||||||| |||||||||||| |||  |  |||||||||||||||||||||||||| |||||| | | |||||||     
T  15740737 ctcactatctcccgccaccatgaagaacaactccggcccccatccgccaaacctccatcctccacaccatacctagccactaacacctttctccacaaaa 15740836  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctca 285  Q
    | ||   ||||| |||||| ||  ||||||||||||| |||| |||||| ||||||||  |||||||| | ||||||||||||||||||||||| ||||    
T  15740837 cttccttctccaataacaaccgtaaacaccatttacccaacaaagcaatgttaaactctgtcaacctcgttacccccaaccctccatactccttcctca 15740935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 8e-34
Query Start/End: Original strand, 87 - 289
Target Start/End: Original strand, 46146194 - 46146396
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||||||||||| ||||||| | |||||||| |||||||||| |||||  |  |||||| |  ||||||| ||||||||||||||||||| ||||||      
T  46146194 ctcactatctcccgccaccaagatgaacaactccggcccccattctccaaaccaccatccgctgcaccatatctagccaccaacaccctacgccacaacc 46146293  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaa 286  Q
    |||| | ||| |||||||| |  ||||||||||| ||||||| |||||| |||||| ||||||| ||| |||| |||| |||||| |||||||| |||||    
T  46146294 catctctctctactaacaaccttcaacaccattttcctaacaaagcaatgttaaaccccctcaatctcctaacacccatccctccgtactccttcctcaa 46146393  T
Q  287 aca 289  Q
    |||    
T  46146394 aca 46146396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 2e-31
Query Start/End: Original strand, 88 - 278
Target Start/End: Complemental strand, 5789714 - 5789524
Alignment:
Q  88 tcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatc 187  Q
    |||| ||||||| ||||||| |||||||||| ||||||||||||||||  |  ||| |||||||||||||||||||||| |||||| ||| ||||||  |    
T  5789714 tcacaatctcccgccaccaagaagaacaactccggcccccatcctccaaacctccaccctccacaccatacctagccactaacaccttacgccacaaccc 5789615  T
Q  188 atcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcc 278  Q
     |||| ||| |||||||| | ||||||||| || || |||| ||  | ||||||||||||||||||| || | ||||||||| ||||||||    
T  5789614 ttcactctctactaacaacctccaacaccactttcccaacaaagtgacattaaactccctcaacctcctatctcccaacccttcatactcc 5789524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 90 - 281
Target Start/End: Complemental strand, 11586818 - 11586627
Alignment:
Q  90 actatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcat 189  Q
    |||||||||| ||||||| ||||||||||||||||||||| |||||  |  |||||| ||||||||||||||||||| |||||| ||||||||||  | |    
T  11586818 actatctccctccaccaagaagaacaacttcggcccccattctccaaacctccatccgccacaccatacctagccactaacaccttacaccacaaccctt 11586719  T
Q  190 caccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactccttt 281  Q
    |    || |||||||| |||||||||||||| |||||||| ||| || ||||||| || |||||| ||||  ||| ||||| ||| ||||||    
T  11586718 ccttatcaactaacaaccgccaacaccattttcctaacagggcagtaataaactctcttaacctcctaacatccatccctctatattccttt 11586627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 90 - 419
Target Start/End: Complemental strand, 54482779 - 54482451
Alignment:
Q  90 actatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcat 189  Q
    |||||||||| ||||||  |||||||||| || |||||||||||||  |  |||||  |||||||||||||||||||||||||||||| ||| ||  | |    
T  54482779 actatctccctccaccacgaagaacaactccgacccccatcctccaaaccaccatctgccacaccatacctagccaccaacaccctacgccataacccct 54482680  T
Q  190 caccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaaca 289  Q
    | |  || |||||||| |||||||||||||| |||| || |||||| |||||||| ||||| |||  ||| |||| ||| ||||||||| | ||||||||    
T  54482679 ctctatcaactaacaaccgccaacaccatttccctagcaaagcaatgttaaactcgctcaatctccgaacacccagccccccatactccctcctcaaaca 54482580  T
Q  290 aacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacctgat 389  Q
     | ||||  ||| || | ||| || ||||| || | | ||||||| |||  ||        ||||| || ||| |||  ||||||||||||||||||||     
T  54482579 caaagaatgccacccaacccacgatatttttcttttttcctcacaaccc-cccaaaaaaaattatttaacaaagattcaatggaagagattatacctgac 54482481  T
Q  390 ggagctttgaagaaggaaagaccatagaca 419  Q
    ||||||||||| ||||||||  ||||||||    
T  54482480 ggagctttgaaaaaggaaagtgcatagaca 54482451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 351 - 501
Target Start/End: Complemental strand, 29553160 - 29553010
Alignment:
Q  351 ttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaa 450  Q
    ||||| |||||| |||  |||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||| | | | || ||  ||||| ||||    
T  29553160 ttattaaataaagattcaatggaagagattatacctgacggagctttgaagaaggaaagagcatagacaggcagagaagtcaagacagctttgagaagaa 29553061  T
Q  451 cgagacgaccaccgaaagaaaggaatcaaatatgccaaccagacaatctag 501  Q
    | | ||||||||| ||||||||||| ||| ||| |||||| |||| |||||    
T  29553060 ccaaacgaccaccaaaagaaaggaaacaactattccaacccgacagtctag 29553010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 195 - 419
Target Start/End: Original strand, 19115061 - 19115285
Alignment:
Q  195 tccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacag 294  Q
    ||||||||||| | |||||||||||| ||||| | |||||||||||||||| |||||    ||||||| ||||||||| ||||||||   | ||||||||    
T  19115061 tccactaacaacctccaacaccatttccctaataaagcaatattaaactccttcaactgtctaacccctaaccctccaaactccttttggagacaaacag 19115160  T
Q  295 aagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacctgatggagc 394  Q
    ||  |||  |||||||||| |||||||||    |||||| |||   ||        ||||| |||||| |||  |||| ||||||||||||||| |||||    
T  19115161 aactccaagctatccaagatattttcctacaatcctcacccccaccccaaaaaaaattattaaataaagattcaatggtagagattatacctgacggagc 19115260  T
Q  395 tttgaagaaggaaagaccatagaca 419  Q
    |||||||||||||||  ||||||||    
T  19115261 tttgaagaaggaaagtgcatagaca 19115285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 195 - 426
Target Start/End: Original strand, 26694553 - 26694784
Alignment:
Q  195 tccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacag 294  Q
    ||||||||||  | |||||||||||||||||  | |||||||||||||||| |||| ||| | |||||||| |||||||||| |||| |  |||| | ||    
T  26694553 tccactaacatcctccaacaccatttacctagtaaagcaatattaaactccttcaatctcctcacccccaaacctccatacttctttttagaacacaaag 26694652  T
Q  295 aagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacctgatggagc 394  Q
     |  ||| |||||||||| |||||| |||    |||||| |||   ||        |||||||||||| |||  ||||||||||||||||||| ||||||    
T  26694653 tatcccaacctatccaagtaatttttctacaatcctcactcccaccccagaaaaaattattcaataaagattcaatggaagagattatacctgttggagc 26694752  T
Q  395 tttgaagaaggaaagaccatagacatgcagag 426  Q
    ||||||||| |||||  |||||||| ||||||    
T  26694753 tttgaagaaagaaagggcatagacaggcagag 26694784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 209 - 280
Target Start/End: Complemental strand, 42953006 - 42952935
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctt 280  Q
    |||||||||||||||||||| ||||| ||||||||||||||| ||| ||||||||||||||||| |||||||    
T  42953006 ccaacaccatttacctaacaaagcaaaattaaactccctcaatctcctaacccccaaccctccagactcctt 42952935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 95 - 419
Target Start/End: Original strand, 8935599 - 8935923
Alignment:
Q  95 ctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccc 194  Q
    ||||| ||||||| |||||||||| |||||||||||||||| || ||||  | || | ||||| | ||| || || || ||| |||| ||| || | |      
T  8935599 ctcccgccaccaagaagaacaactccggcccccatcctccaacctcccacacacctcgccataacgagcgactaaaactctataccaaaaaccaccccta 8935698  T
Q  195 tccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacag 294  Q
    ||||||||||  | |||||||||||| ||||  |  ||||||||||||||| |||||    ||||||| ||||||||| ||||||||   | ||||||||    
T  8935699 tccactaacatcctccaacaccatttccctagtaaggcaatattaaactccttcaactgtctaacccctaaccctccaaactccttttggagacaaacag 8935798  T
Q  295 aagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacctgatggagc 394  Q
    ||  |||  ||||| |||| |||||||| ||  |||||| || |  |         ||||| |||||| |||  |||| ||||||||||||||| |||||    
T  8935799 aactccaatctatctaagacattttcctgtgatcctcactccaccccaaaaaaaaattattaaataaaaattcaatggcagagattatacctgacggagc 8935898  T
Q  395 tttgaagaaggaaagaccatagaca 419  Q
    |||||||||||||||| ||||||||    
T  8935899 tttgaagaaggaaagagcatagaca 8935923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 369 - 508
Target Start/End: Original strand, 19756066 - 19756205
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaag 468  Q
    ||||||||||||||||||||  ||| |||||| ||||||||  |||||||| | || ||| | | ||  ||||| || ||||  | ||||||||||||||    
T  19756066 atggaagagattatacctgacagagttttgaaaaaggaaagtgcatagacaggtagcgcagtcaggacggactttagtagaatcaaacgaccaccgaaag 19756165  T
Q  469 aaaggaatcaaatatgccaaccagacaatctagatttaat 508  Q
    ||||||| | | | ||||||||||||||||||||||||||    
T  19756166 aaaggaaccgactttgccaaccagacaatctagatttaat 19756205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 369 - 508
Target Start/End: Complemental strand, 19783740 - 19783601
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaag 468  Q
    ||||||||||||||||||||  ||| |||||| ||||||||  |||||||| | || ||| | | ||  ||||| || ||||  | ||||||||||||||    
T  19783740 atggaagagattatacctgacagagttttgaaaaaggaaagtgcatagacaggtagcgcagtcaggacggactttagtagaatcaaacgaccaccgaaag 19783641  T
Q  469 aaaggaatcaaatatgccaaccagacaatctagatttaat 508  Q
    ||||||| | | | ||||||||||||||||||||||||||    
T  19783640 aaaggaaccgactttgccaaccagacaatctagatttaat 19783601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 153 - 419
Target Start/End: Complemental strand, 7662865 - 7662599
Alignment:
Q  153 ccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacc 252  Q
    ||||||||||| || || || ||| |||||||| || | |  ||||| ||||  |||||||||||||||||||||| |||| ||||||| ||| |||||     
T  7662865 ccatacctagcaactaagacactataccacaaaccacctctgtccaccaacatccgccaacaccatttacctaacaaagcactattaaattccttcaact 7662766  T
Q  253 tcataacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnntt 352  Q
       | |||||||| ||||||| ||||||| |  ||||||||     ||| |||||||||| |||||| |||||  ||||||| |||| ||        |     
T  7662765 gtctcacccccaaacctccattctcctttgtggaacaaacaattttccagcctatccaagtaatttttctatgatcctcacatccctcccaaaaaaaatg 7662666  T
Q  353 attcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    ||| |||||| |||  | |||||| |||||||||||||||||||||||||| |||||  ||||||||    
T  7662665 attaaataaagattcaagggaagaaattatacctgatggagctttgaagaaagaaagggcatagaca 7662599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 351 - 508
Target Start/End: Complemental strand, 19733347 - 19733190
Alignment:
Q  351 ttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaa 450  Q
    ||||| |||||| |||  |||||||||||||||||||| ||||||||||| ||||||||| |||||||| | || ||| | | || ||| ||||| || |    
T  19733347 ttatttaataaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcatagacaggaagggcagtcaggacagatttgagaagga 19733248  T
Q  451 cgagacgaccaccgaaagaaaggaatcaaatatgccaaccagacaatctagatttaat 508  Q
      |  |||||||| ||||||||||| | | ||||| ||||| ||||||||| ||||||    
T  19733247 tcaatcgaccaccaaaagaaaggaaccgactatgctaaccaaacaatctagctttaat 19733190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 351 - 419
Target Start/End: Complemental strand, 42952890 - 42952822
Alignment:
Q  351 ttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||||| ||| |||  ||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  42952890 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagaca 42952822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 369 - 419
Target Start/End: Original strand, 20396381 - 20396431
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  20396381 atggaagagattatacctgatggagctttgaagaaggaaagcgcatagaca 20396431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 369 - 419
Target Start/End: Original strand, 42779049 - 42779099
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  42779049 atggaagagattatacctgatggagctttgaagaaggaaagcgcatagaca 42779099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 369 - 426
Target Start/End: Original strand, 34976740 - 34976797
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    |||||||||||||||||||||||||||||||||||||||||  |||| ||| ||||||    
T  34976740 atggaagagattatacctgatggagctttgaagaaggaaagcgcataaacaggcagag 34976797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 375 - 508
Target Start/End: Original strand, 55299426 - 55299559
Alignment:
Q  375 gagattatacctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaagga 474  Q
    ||||||||||||| |||||||||||||||||||||  |||||||| ||||||   | | || ||| ||||| ||||| |  |||||||| ||||| || |    
T  55299426 gagattatacctgttggagctttgaagaaggaaagtgcatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaa 55299525  T
Q  475 atcaaatatgccaaccagacaatctagatttaat 508  Q
    | | | ||| |||||| |||||||||||||||||    
T  55299526 accgactattccaacccgacaatctagatttaat 55299559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 101 - 281
Target Start/End: Original strand, 7099013 - 7099193
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccact 200  Q
    |||||||  ||||| ||| |||||||||||||||| || | |||||||| ||||||| ||||| | ||| |||| | |||||||| | || |  || |||    
T  7099013 ccaccaaatagaaccactccggcccccatcctccaacctctcatcctcctcaccatatctagctatcaaaacccgataccacaaaccctctcgatcaact 7099112  T
Q  201 aacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactccttt 281  Q
    ||||||| ||||||| | || || ||||  ||   ||||||||||||||||  | |||| ||||| |||||||||||||||    
T  7099113 aacaaactccaacacaactttcccaacaacgcctcattaaactccctcaactgcctaacacccaaacctccatactccttt 7099193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 10562663 - 10562615
Alignment:
Q  371 ggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||    
T  10562663 ggaagagattatacctgatggagctttgaagaaggaaagcgcatagaca 10562615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 721 - 854
Target Start/End: Original strand, 34774688 - 34774819
Alignment:
Q  721 aaaaatta-acaatacaaattgtataaaataaaaaacaccaacatcatccataataatatttctccaaaacttcaaaaataaggttcaaactttacaaat 819  Q
    |||||||| |||||| |||| |||||||||||| |||| ||||||||||||||| ||   ||| ||||||| ||||||| | ||   ||| |||||||||    
T  34774688 aaaaattacacaataaaaatcgtataaaataaacaacatcaacatcatccataacaa---ttcaccaaaacctcaaaaacagggaataaattttacaaat 34774784  T
Q  820 catataaaccaaatggtaattataaatattgatga 854  Q
    | |||||| |||  ||||||| |||||||||||||    
T  34774785 cgtataaagcaatgggtaattgtaaatattgatga 34774819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 208 - 280
Target Start/End: Complemental strand, 43516250 - 43516178
Alignment:
Q  208 gccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctt 280  Q
    ||||||||||||||||||||| |||| ||||||| |||  |||| || | |||||||||||||||||||||||    
T  43516250 gccaacaccatttacctaacaaagcactattaaattcctgcaacttcctcacccccaaccctccatactcctt 43516178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 271
Target Start/End: Complemental strand, 51072194 - 51072132
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctcc 271  Q
    |||||||||||| ||||||||||||| |||||||||||||| |||| | |||||||| |||||    
T  51072194 ccaacaccatttccctaacagagcaacattaaactccctcatcctcctgacccccaaacctcc 51072132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 373 - 426
Target Start/End: Original strand, 2072343 - 2072396
Alignment:
Q  373 aagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    ||||||||||| |||| |||||||||||||| |||||| |||||||||||||||    
T  2072343 aagagattatatctgacggagctttgaagaaagaaagagcatagacatgcagag 2072396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 168 - 289
Target Start/End: Complemental strand, 19733523 - 19733402
Alignment:
Q  168 aacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaacc 267  Q
    |||||||||| ||||||  |||| | ||| | |||||| | |||||||||||| ||||||| | || | |||||||||||||| ||| |||| |||| ||    
T  19733523 aacaccctacgccacaacccatctctctctattaacaacctccaacaccattttcctaacaaaacagtgttaaactccctcaatctcctaacacccatcc 19733424  T
Q  268 ctccatactcctttctcaaaca 289  Q
    || | |||||||| ||||||||    
T  19733423 cttcgtactccttcctcaaaca 19733402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 375 - 508
Target Start/End: Complemental strand, 23872812 - 23872679
Alignment:
Q  375 gagattatacctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaagga 474  Q
    ||||||||||||| |||||||||||||||||||||  |||||||| ||||||   | | || ||| ||||| ||||| |  |||||||| ||||| || |    
T  23872812 gagattatacctgctggagctttgaagaaggaaagtgcatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaa 23872713  T
Q  475 atcaaatatgccaaccagacaatctagatttaat 508  Q
    | | | ||| |||||| |||| ||||||||||||    
T  23872712 accgactattccaacccgacagtctagatttaat 23872679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 374 - 419
Target Start/End: Complemental strand, 43516084 - 43516039
Alignment:
Q  374 agagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||    
T  43516084 agagattatacctgatggagccttgaagaaggaaagagcatagaca 43516039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 364 - 419
Target Start/End: Original strand, 40688874 - 40688930
Alignment:
Q  364 attttatggaagagattatacctgatggag-ctttgaagaaggaaagaccatagaca 419  Q
    ||||||||||||||||| |||||| ||||| ||||||||||||||||| ||||||||    
T  40688874 attttatggaagagattgtacctgctggagcctttgaagaaggaaagagcatagaca 40688930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 368 - 419
Target Start/End: Complemental strand, 19162511 - 19162460
Alignment:
Q  368 tatggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    ||||||||||||| |||||| |||||| ||||||||||||||| ||||||||    
T  19162511 tatggaagagattgtacctgctggagccttgaagaaggaaagagcatagaca 19162460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 184
Target Start/End: Complemental strand, 19162786 - 19162703
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaa 184  Q
    ||||||| |||||| ||| |||||||||||||||| || ||| |||   |||||||| ||||| |||||||||||| |||||||    
T  19162786 ccaccaaaaagaaccactccggcccccatcctccaacctcccgtccctaacaccatatctagcaaccaacaccctataccacaa 19162703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 134
Target Start/End: Complemental strand, 19735358 - 19735311
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctcc 134  Q
    ||||||||||||| ||||||| |||||||||| |||||||||||||||    
T  19735358 ctcactatctcccgccaccaagaagaacaactccggcccccatcctcc 19735311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 369 - 408
Target Start/End: Complemental strand, 53486270 - 53486231
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaa 408  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  53486270 atggaagagattatacttgatggagctttgaagaaggaaa 53486231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 383 - 426
Target Start/End: Complemental strand, 55464208 - 55464165
Alignment:
Q  383 acctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    ||||||| |||||||||||||||||||| |||||||||||||||    
T  55464208 acctgattgagctttgaagaaggaaagagcatagacatgcagag 55464165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 233 - 291
Target Start/End: Original strand, 25136067 - 25136125
Alignment:
Q  233 aatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaa 291  Q
    |||||||||||||||||||||| | || ||||| ||||||| ||||||| |||||||||    
T  25136067 aatattaaactccctcaacctcttcacacccaaacctccattctcctttttcaaacaaa 25136125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 324
Target Start/End: Complemental strand, 23872979 - 23872862
Alignment:
Q  207 cgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaagaccatccta 306  Q
    |||||||||||||| ||||||| ||| | |||||||||| ||||  ||   |||||||| || |||||||||||| | ||||||||||    ||| | ||    
T  23872979 cgccaacaccattttcctaacaaagctaaattaaactccttcaatttccgtacccccaaaccgccatactccttttttaaacaaacagtttgccaactta 23872880  T
Q  307 tccaagaaattttcctat 324  Q
     |||||||||||||||||    
T  23872879 accaagaaattttcctat 23872862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 184
Target Start/End: Original strand, 36183058 - 36183151
Alignment:
Q  91 ctatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaa 184  Q
    ||||||||| |||||||  ||||  ||| ||||||||| |||||| ||||||||||||| ||||||| || ||||| |  |||||| |||||||    
T  36183058 ctatctccctccaccaagtagaaacactccggcccccaacctccaaccgcccatcctcctcaccatatcttgccacaagtaccctataccacaa 36183151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 38296258 - 38296390
Alignment:
Q  122 gcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaa-tcatcaccctccactaacaaacgccaacaccattt 220  Q
    ||||||| |||||| || ||||| | || ||||||| || ||||||||||||||| |||| ||| || || | ||||||||| || ||||||||||||||    
T  38296258 gcccccaacctccaacctcccattcacctcaccatatctcgccaccaacaccctataccaaaaactcctc-ctctccactaataaccgccaacaccattt 38296356  T
Q  221 acctaacagagcaatattaaactccctcaacctc 254  Q
     ||||| |  ||   |||||||||||||||||||    
T  38296357 ccctaataacgcctcattaaactccctcaacctc 38296390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 369 - 409
Target Start/End: Original strand, 15741019 - 15741059
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaag 409  Q
    |||||||||||||||||||| ||||||||||| ||||||||    
T  15741019 atggaagagattatacctgacggagctttgaaaaaggaaag 15741059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 95 - 135
Target Start/End: Original strand, 23657822 - 23657862
Alignment:
Q  95 ctcccaccaccaacaagaacaacttcggcccccatcctcca 135  Q
    ||||| ||||||| |||||||||||||||||||||||||||    
T  23657822 ctcccgccaccaagaagaacaacttcggcccccatcctcca 23657862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 245
Target Start/End: Original strand, 13841794 - 13841829
Alignment:
Q  210 caacaccatttacctaacagagcaatattaaactcc 245  Q
    ||||||||||||||||| ||||||||||||||||||    
T  13841794 caacaccatttacctaaaagagcaatattaaactcc 13841829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 426
Target Start/End: Original strand, 20675840 - 20675891
Alignment:
Q  375 gagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    ||||||||||||| ||||||||||||||| |||||  |||||||| ||||||    
T  20675840 gagattatacctgctggagctttgaagaatgaaagtgcatagacaggcagag 20675891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 419
Target Start/End: Complemental strand, 29328119 - 29328072
Alignment:
Q  372 gaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    ||||| ||||||| || |||||| ||||||||||||||||||||||||    
T  29328119 gaagaaattatacttgttggagccttgaagaaggaaagaccatagaca 29328072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 40688597 - 40688680
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaa 184  Q
    ||||||| |||||| ||| |||||||||||||||| || |||||||   |||||||| ||| | |||||||||| | |||||||    
T  40688597 ccaccaaaaagaaccactccggcccccatcctccaacctcccatccctaacaccatatctaccaaccaacacccgataccacaa 40688680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 369 - 419
Target Start/End: Original strand, 38296504 - 38296554
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||| | ||||||||||| ||||| ||||||||||||||| ||||||||    
T  38296504 atggaaaaaattatacctgacggagccttgaagaaggaaagagcatagaca 38296554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 295
Target Start/End: Complemental strand, 5633947 - 5633850
Alignment:
Q  198 actaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacaga 295  Q
    |||||||| | ||||||||| |||||||| |  ||| |||||||||| || |  ||| | ||| |||| ||||||  |||||||||||||||||||||    
T  5633947 actaacaatctccaacaccacttacctaataatgcactattaaactcactaattctccttacctccaaacctccaacctcctttctcaaacaaacaga 5633850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 19648503 - 19648544
Alignment:
Q  378 attatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    ||||||||||| |||||||||||||| |||||| ||||||||    
T  19648503 attatacctgacggagctttgaagaaagaaagagcatagaca 19648544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 48805617 - 48805682
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccata 274  Q
    ||||||| | |||||||| ||||||||||||||||| |||| |||| | | |||||| ||||||||    
T  48805617 ccaacacaacttacctaatagagcaatattaaactctctcatcctcctcagccccaaacctccata 48805682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 324
Target Start/End: Original strand, 55299249 - 55299366
Alignment:
Q  207 cgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaagaccatccta 306  Q
    |||||||||||||| ||||||| ||| | |||||||||| ||||  ||   |||||||| || ||| |||||||| | ||||||||||    ||| | ||    
T  55299249 cgccaacaccattttcctaacaaagctaaattaaactccttcaatttccgcacccccaaaccgccacactccttttttaaacaaacagtttgccaactta 55299348  T
Q  307 tccaagaaattttcctat 324  Q
     |||||||||||||||||    
T  55299349 accaagaaattttcctat 55299366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 123; Significance: 2e-62; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 2e-62
Query Start/End: Original strand, 87 - 508
Target Start/End: Original strand, 2364794 - 2365216
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||||||||||||||||||||||| |||||| | | |||||||     
T  2364794 ctcacaatctccctccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaag 2364893  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaa 286  Q
    |||| | ||||| |||||| | ||||||||||||||| |||| |||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||     
T  2364894 catccctctccaataacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatactccttcctcat 2364993  T
Q  287 acaaacagaagaccatcctatccaagaaattttcctatgtccctcacaccc-cttccnnnnnnnnttattcaataaatattttatggaagagattatacc 385  Q
    ||  | ||||  ||| |  | |||||| ||||| || | | |||||| ||| |  ||        ||||| || ||| |||  |||||||||||||||||    
T  2364994 actcaaagaatcccacctaacccaagatatttttcttttttcctcaccccctcccccaaaaaaatttattaaacaaagattcaatggaagagattatacc 2365093  T
Q  386 tgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgc 485  Q
    ||  ||||||||||||||||||||  |||||||| | |||||| | | || |||||| || ||||  | ||||||||||||||| ||||| | | | |||    
T  2365094 tgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaacgaccaccgaaagataggaaccgactttgc 2365193  T
Q  486 caaccagacaatctagatttaat 508  Q
    |||||||||||||||||||||||    
T  2365194 caaccagacaatctagatttaat 2365216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 4e-57
Query Start/End: Original strand, 87 - 508
Target Start/End: Complemental strand, 34332438 - 34332017
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||||||||||| ||||||  |||||||||| | ||||||||||||||  |  |||||| ||||||||||||||||||| |||||| | | |||||||     
T  34332438 ctcactatctccctccaccacgaagaacaactcccgcccccatcctccaaacctccatccgccacaccatacctagccactaacacctttctccacaaag 34332339  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaa 286  Q
    | || | ||||| |||||| ||||||||||||||||| |||| |||||| |||||||| ||||||||| ||||||||||||||||||||||||| ||||     
T  34332338 cctccctctccaataacaaccgccaacaccatttacccaacaaagcaatgttaaactctctcaacctcgtaacccccaaccctccatactccttcctcat 34332239  T
Q  287 acaaacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacct 386  Q
    ||  | || |  |||||  | |||||| ||||| || | |  ||||| |||   ||        ||||| || ||| |||  ||||||||||||||||||    
T  34332238 actcaaagtatcccatctaacccaagatatttttctttttttctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacct 34332139  T
Q  387 gatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgcc 486  Q
    || |||||||| || ||||||||  |||||||| | |||||| | | || |||||| || ||||  | ||||||||||||||||||||| | | | ||||    
T  34332138 gacggagctttaaaaaaggaaagtgcatagacaggtagagcagtcaggacagactttagtagaatcaaacgaccaccgaaagaaaggaaccgactttgcc 34332039  T
Q  487 aaccagacaatctagatttaat 508  Q
    ||||||||||||||||||||||    
T  34332038 aaccagacaatctagatttaat 34332017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 4e-48
Query Start/End: Original strand, 74 - 508
Target Start/End: Complemental strand, 962799 - 962365
Alignment:
Q  74 cccatcccggattctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacacc 173  Q
    ||||||||  || ||||||||||||| ||||||| | |||||||| || |||||||||||||  |  |||||| || |||||||||||||||| ||||||    
T  962799 cccatccctaatcctcactatctccctccaccaagatgaacaactccgacccccatcctccaaaccaccatccgccccaccatacctagccactaacacc 962700  T
Q  174 ctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccat 273  Q
    |||| ||||||  |||| | ||| |||||||| | |||||||||||| ||||||| ||||||||||||||||||||| ||| |||| |||| |||||| |    
T  962699 ctacgccacaacccatctctctctactaacaacctccaacaccattttcctaacaaagcaatattaaactccctcaaactcctaacacccatccctccgt 962600  T
Q  274 actcctttctcaaacaaacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatgga 373  Q
    ||||||| |||||||| | ||||  ||| |  ||||| |  ||||| || |   ||||||  |||  ||        ||||| || ||| |||  |||||    
T  962599 actccttcctcaaacataaagaattccaactaatccacgttatttttcttttatcctcacttcccccccaaaaaaatttatttaacaaagattcaatgga 962500  T
Q  374 agagattatacctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaagg 473  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||| | || ||| | | || ||| ||||| || |  |  || ||||| |||||||||    
T  962499 agagattatacctgacggagctttgaaaaaggaaagagcatagacaggaagtgcagtcaggacagatttgagaaggatcaaccggccaccaaaagaaagg 962400  T
Q  474 aatcaaatatgccaaccagacaatctagatttaat 508  Q
    || | | ||||||||||||||||||||| ||||||    
T  962399 aaccgactatgccaaccagacaatctagctttaat 962365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 9e-43
Query Start/End: Original strand, 87 - 508
Target Start/End: Complemental strand, 19919852 - 19919431
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |   ||||||||||||||||||||||||| ||||||   | |||||||     
T  19919852 ctcacaatctccctccaccacgaagaacaactccggcccccatcctccaaaccgtcatcctccacaccatacctagccactaacacctgtctccacaaag 19919753  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaa 286  Q
    |||| | ||||| |||||| | |||||||||||| || ||||  ||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||     
T  19919752 catccctctccaataacaacctccaacaccatttgcccaacaaggcaatgttaaactccctcaacctcttaacccccaaccctccatactccttcctcat 19919653  T
Q  287 acaaacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacct 386  Q
    ||  | ||    |||    | |||||| ||||| || | | |||||| |||   ||        ||||| || ||| |||  ||||||||||||||||||    
T  19919652 acccaaagtctcccacgtaacccaagatatttttcttttttcctcactccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacct 19919553  T
Q  387 gatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgcc 486  Q
    |  ||||||||||||||||||||  |||||||| | |||||| ||| ||   |||| || ||||  | ||||||||||||||| || || | | | ||||    
T  19919552 gtcggagctttgaagaaggaaagtgcatagacaggtagagcagttaggacgaactttagtagaatcaaacgaccaccgaaagatagaaaccgactttgcc 19919453  T
Q  487 aaccagacaatctagatttaat 508  Q
    ||||||||||||||||||||||    
T  19919452 aaccagacaatctagatttaat 19919431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 5e-41
Query Start/End: Original strand, 87 - 285
Target Start/End: Complemental strand, 10323194 - 10322996
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||| ||||||| ||||||  ||||| |||| ||||||||||||||||  |  |||||||||||||||||||||||||| |||||| | | |||||||     
T  10323194 ctcacaatctccctccaccacgaagaataactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaag 10323095  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctca 285  Q
    |||| | |||||  ||||| | ||||||||||||||| |||| |||||| ||||||||||||| |||| ||||||||||||||||| ||||||| ||||    
T  10323094 catccctctccaacaacaacctccaacaccatttacccaacaaagcaatgttaaactccctcagcctcttaacccccaaccctccaaactccttcctca 10322996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 5e-41
Query Start/End: Original strand, 90 - 508
Target Start/End: Original strand, 19891197 - 19891615
Alignment:
Q  90 actatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcat 189  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||  |  |||||  |||||||||||||||||||||||||||||| ||||||| ||     
T  19891197 actatctccctccaccacgaagaacaacttcggcccccatcctccaaaccaccatctgccacaccatacctagccaccaacaccctacgccacaaaccaa 19891296  T
Q  190 caccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaaca 289  Q
    | |  || |||||||| |||||||||||||| |  ||||  ||||  |||||||| ||||||||| |||| |||| ||||||||||||| | ||||||||    
T  19891297 ccctatcaactaacaatcgccaacaccatttcctcaacaatgcaaagttaaactctctcaacctcctaacacccatccctccatactccctcctcaaaca 19891396  T
Q  290 aacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacctgat 389  Q
     | ||||  ||| || | |||||||| ||| || | | ||||||  |||  ||        ||||| || ||| |||  |||||||| |||||||||||     
T  19891397 caaagaactccaaccaacccaagaaaattttctttcttcctcactacccccccaaaaaaatttatttaacaaagattcaatggaagatattatacctgac 19891496  T
Q  390 ggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgccaac 489  Q
    ||||||||||| ||||||||  |||| ||| | || ||| | | || ||| ||||| ||||  ||  ||||||  || |||||||| | | ||||| |||    
T  19891497 ggagctttgaaaaaggaaagttcataaacaggaagcgcagtcaagacagatttgagtagaatcaggtgaccactaaaggaaaggaaccgactatgctaac 19891596  T
Q  490 cagacaatctagatttaat 508  Q
    |||||||||||||||||||    
T  19891597 cagacaatctagatttaat 19891615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 8e-37
Query Start/End: Original strand, 90 - 289
Target Start/End: Complemental strand, 48569659 - 48569460
Alignment:
Q  90 actatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcat 189  Q
    |||||||||| | ||||  ||||||| |||||||||||||||||||  |  |||||| |||||||||||||||||||||||||||||| ||||||  |||    
T  48569659 actatctccctctaccacgaagaacagcttcggcccccatcctccaaaccaccatccgccacaccatacctagccaccaacaccctacgccacaacccat 48569560  T
Q  190 caccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaaca 289  Q
    | |  || |||||||| ||||||||||||||  ||| || |||||| |||||||| ||||| ||| |||| |||| ||||||||||||| | ||||||||    
T  48569559 ctctatcaactaacaaccgccaacaccatttctctagcaaagcaatgttaaactctctcaatctcctaacacccagccctccatactccctcctcaaaca 48569460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 5e-35
Query Start/End: Original strand, 87 - 287
Target Start/End: Original strand, 3141368 - 3141568
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||||||||||| ||||||| | |||||| | ||||||||||||||||     |||||| || |||||||||||||||| |||||||||| ||||||      
T  3141368 ctcactatctcccgccaccaagatgaacaattccggcccccatcctccaaatcaccatccgccgcaccatacctagccactaacaccctacgccacaacc 3141467  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaa 286  Q
    |||| | ||| |||||||| | |||||||||||| ||||||| |||| | |||||||||||||| ||| |||| |||| ||||| ||||||||| |||||    
T  3141468 catctctctctactaacaacctccaacaccattttcctaacaaagcagtgttaaactccctcaatctcctaacacccatccctctatactccttcctcaa 3141567  T
Q  287 a 287  Q
    |    
T  3141568 a 3141568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 8e-34
Query Start/End: Original strand, 87 - 285
Target Start/End: Original strand, 16179464 - 16179662
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||| ||||||| ||||||| |||||||||| ||||||||||||||||  |  ||| | || ||||||||||| ||||| |||||| ||| ||||||      
T  16179464 ctcacaatctcccgccaccaagaagaacaactccggcccccatcctccaaacctccaccgtctacaccatacctcgccactaacaccttacgccacaacc 16179563  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctca 285  Q
    | |||| ||| |||||||| | |||||||||||| || |||| ||| | ||||||||||||||||||| |||| ||||||||| |||||||||| ||||    
T  16179564 cttcactctctactaacaacctccaacaccatttccccaacaaagcgacattaaactccctcaacctcctaactcccaacccttcatactccttcctca 16179662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 1e-32
Query Start/End: Original strand, 93 - 289
Target Start/End: Complemental strand, 12341872 - 12341676
Alignment:
Q  93 atctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcac 192  Q
    ||||||| ||||||  |||| ||||| ||||||||||||||||  |  ||||||||||| ||||||||||||| ||||||||||| ||||||| |  | |    
T  12341872 atctccctccaccacgaagagcaactccggcccccatcctccaaaccaccatcctccacgccatacctagccaacaacaccctactccacaaacctcccc 12341773  T
Q  193 cctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaaca 289  Q
      || |||||||  |||||||||||||| || |||| |||||| |||||||| ||||||||| | || |||||||||||||||||| | ||||||||    
T  12341772 tatcaactaacagccgccaacaccatttccccaacaaagcaatgttaaactctctcaacctcctcacacccaaccctccatactccctcctcaaaca 12341676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 5e-29
Query Start/End: Original strand, 101 - 271
Target Start/End: Complemental strand, 52250733 - 52250564
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccact 200  Q
    ||||||| |||||| ||| ||||||||| |||||| || |||||||||| ||||||| || ||||||||||||||| |||| |||  | | | ||||||     
T  52250733 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccataaactacc-ctctccacc 52250635  T
Q  201 aacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctcc 271  Q
    |||||||||||||||||||| |||||||  |||| |||||||||||||||||||   || |||||||||||    
T  52250634 aacaaacgccaacaccatttccctaacaacgcaacattaaactccctcaacctccgcacacccaaccctcc 52250564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 4e-26
Query Start/End: Original strand, 209 - 426
Target Start/End: Complemental strand, 15481259 - 15481042
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatc 308  Q
    |||||||||||||||||| | |||||||||||||||| ||||| || |||||||||| ||||||| ||||||| |  |||| |  | |  ||| ||||||    
T  15481259 ccaacaccatttacctaataaagcaatattaaactccttcaacttcctaacccccaaacctccatgctcctttttagaacacaaggtattccaacctatc 15481160  T
Q  309 caagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaa 408  Q
    |||| |||||| |||    |||||| |||   ||        |||||||||||| |||  ||||||||||||||||||||||||||||||||||| ||||    
T  15481159 caagtaatttttctacaatcctcactcccaccccaaaaaaaattattcaataaagattcaatggaagagattatacctgatggagctttgaagaaagaaa 15481060  T
Q  409 gaccatagacatgcagag 426  Q
    || |||||||| ||||||    
T  15481059 gagcatagacaagcagag 15481042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 84 - 293
Target Start/End: Complemental strand, 20531677 - 20531470
Alignment:
Q  84 attctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccaca 183  Q
    |||||||||||||||| ||||||| ||||| |||| |  |||||||| ||||  |  ||||||||| || |||||||||| ||||||||| ||| |||||    
T  20531677 attctcactatctccctccaccaagaagaataactccaacccccatcttccaaacctccatcctccgcagcatacctagctaccaacaccttacgccaca 20531578  T
Q  184 aatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttct 283  Q
    || | || |  || | ||||||||||||||||||||| || || |  ||  | |||||||  ||||||||| ||||||||||||| ||||||||||| ||    
T  20531577 aaccttccctatcaattaacaaacgccaacaccatttccccaataatgcggtgttaaact--ctcaacctcctaacccccaacccaccatactccttcct 20531480  T
Q  284 caaacaaaca 293  Q
    || |||||||    
T  20531479 catacaaaca 20531470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 369 - 505
Target Start/End: Complemental strand, 48569364 - 48569228
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaag 468  Q
    |||||||||||||||||||||||||||||||| ||||||||  |||||||| | || ||| | | ||  || ||||| ||||  | ||||||||| ||||    
T  48569364 atggaagagattatacctgatggagctttgaaaaaggaaagtgcatagacaggaagtgcagtcaggacggatttgagaagaatcaaacgaccaccaaaag 48569265  T
Q  469 aaaggaatcaaatatgccaaccagacaatctagattt 505  Q
    ||||||| | | |||||||||||||||||||||||||    
T  48569264 aaaggaaccgactatgccaaccagacaatctagattt 48569228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 122 - 278
Target Start/End: Original strand, 48930278 - 48930434
Alignment:
Q  122 gcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccattta 221  Q
    ||||||| |||||| || |||||||||| ||||||| || |||||||| |||||| |||| |||  ||  | ||| || ||||  |||||||||||||||    
T  48930278 gcccccaacctccaacctcccatcctcctcaccatatctcgccaccaaaaccctataccataaactattcctctctaccaacagccgccaacaccattta 48930377  T
Q  222 cctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcc 278  Q
    |||||||  ||||||||||||||||||||||||   |||||||| |||||| |||||    
T  48930378 cctaacaatgcaatattaaactccctcaacctccgcacccccaaacctccaaactcc 48930434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 351 - 508
Target Start/End: Complemental strand, 17077656 - 17077499
Alignment:
Q  351 ttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaa 450  Q
    |||||||| ||| |||  ||||||||||||||||||||  |||||||||| ||||||||  |||||||||| || ||||||| || | | ||||| || |    
T  17077656 ttattcaacaaagattcaatggaagagattatacctgacagagctttgaaaaaggaaagtgcatagacatgaagtgcaattaggacaaatttgagaagga 17077557  T
Q  451 cgagacgaccaccgaaagaaaggaatcaaatatgccaaccagacaatctagatttaat 508  Q
      | ||||||||  ||||||||||| | | ||||||||||||||||||||| ||||||    
T  17077556 tcaaacgaccactaaaagaaaggaaccgactatgccaaccagacaatctagttttaat 17077499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 209 - 509
Target Start/End: Original strand, 36709549 - 36709848
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatc 308  Q
    |||||||||||||||||  | |||||||||||||||| ||||| || |||||||||| ||||||| ||||||| |  |||| |  | |  ||| ||||||    
T  36709549 ccaacaccatttacctagtaaagcaatattaaactccttcaacttcctaacccccaaacctccatgctcctttttagaacacaaggtattccaacctatc 36709648  T
Q  309 caagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaa 408  Q
    |||| |||||| |||    |||||| |||   ||        |||||||||||| |||  ||||||||||||||||||| ||||||||||||||| ||||    
T  36709649 caagtaatttttctacaatcctcactcccac-cccaaaaaaattattcaataaagattcaatggaagagattatacctgttggagctttgaagaaagaaa 36709747  T
Q  409 gaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgccaaccagacaatctagatttaat 508  Q
    || ||| |||| ||||||   |||  |  || |||||||| |  | ||| |||||||||||||| |||| | ||| |||||| |||| ||||||||||||    
T  36709748 gagcatcgacaggcagagatgttagaactgatttgaggaggatcaaacggccaccgaaagaaagaaatctactattccaacccgacagtctagatttaat 36709847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 209 - 426
Target Start/End: Complemental strand, 46908171 - 46907954
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatc 308  Q
    |||| |||| |||||||||| ||||| ||||||||||| ||| | | | ||||||||||||||| |||||||    ||||| |||  |  ||| ||||||    
T  46908171 ccaagaccacttacctaacaaagcaaaattaaactcccacaaacgcctcacccccaaccctccaaactccttctgtaaacacacattatgccaacctatc 46908072  T
Q  309 caagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaa 408  Q
    || || ||||||||| |  ||||||||||   ||        ||||| |||||| |||  |||||||||||||||| |||||||||||||||||||||||    
T  46908071 catgatattttcctacggtcctcacacccaccccaaaaaaaattatttaataaagattcaatggaagagattatacttgatggagctttgaagaaggaaa 46907972  T
Q  409 gaccatagacatgcagag 426  Q
    || |||||| | ||||||    
T  46907971 gagcatagataggcagag 46907954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 209 - 281
Target Start/End: Complemental strand, 21740024 - 21739952
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactccttt 281  Q
    |||||||||||||||||||| ||||| ||||||||||||||| ||| | ||||||||||||||| ||||||||    
T  21740024 ccaacaccatttacctaacaaagcaaaattaaactccctcaatctccttacccccaaccctccagactccttt 21739952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 209 - 280
Target Start/End: Complemental strand, 14863966 - 14863895
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctt 280  Q
    ||||||||||||||||||||  |||| ||||||||||||||| ||| ||||||||||||||||| |||||||    
T  14863966 ccaacaccatttacctaacaatgcaaaattaaactccctcaatctcctaacccccaaccctccagactcctt 14863895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 209 - 419
Target Start/End: Complemental strand, 22734224 - 22734014
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatc 308  Q
    |||||||||||||||||  | |||||||||||| ||||| ||| || | ||| |||| |||||||||||||| | ||||||||||  |  ||| | || |    
T  22734224 ccaacaccatttacctagtaaagcaatattaaattcccttaacttcctcacctccaatcctccatactccttacgcaaacaaacaatattccaacgtaac 22734125  T
Q  309 caagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaa 408  Q
    ||||| |||||||||||  |||||| ||||  |         |||||||||| | |||  |||||||||||||||| ||||||||| ||||||||| | |    
T  22734124 caagatattttcctatgatcctcactcccccccaaaaaaaaattattcaatatagattcaatggaagagattatacatgatggagccttgaagaagaaca 22734025  T
Q  409 gaccatagaca 419  Q
    || ||||||||    
T  22734024 gagcatagaca 22734014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 209 - 281
Target Start/End: Original strand, 10868242 - 10868314
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactccttt 281  Q
    |||||||||||||||||||| ||||| ||||||||||||||| ||| | ||||| ||||||||| ||||||||    
T  10868242 ccaacaccatttacctaacaaagcaaaattaaactccctcaatctccttacccctaaccctccagactccttt 10868314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 351 - 426
Target Start/End: Complemental strand, 24926044 - 24925969
Alignment:
Q  351 ttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    ||||| |||||| |||  ||||||||||||||||||||||||||||||||||| |||||  |||||||| ||||||    
T  24926044 ttatttaataaagattcaatggaagagattatacctgatggagctttgaagaaagaaagtgcatagacaggcagag 24925969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 295
Target Start/End: Original strand, 31675481 - 31675656
Alignment:
Q  120 cggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatt 219  Q
    ||||||||  |||||| || |||  ||||| ||||||| ||  |||||| ||||||| |||| ||| || | |  ||||| ||||  |||||||||||||    
T  31675481 cggccccctacctccaacctccctgcctcctcaccatatctcaccaccagcaccctataccaaaaaccacctctatccaccaacattcgccaacaccatt 31675580  T
Q  220 tacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacaga 295  Q
    ||||||||| ||||   |||||||||||||||    | ||||| |||||||||||||||||||  |||||||||||    
T  31675581 tacctaacaaagcatggttaaactccctcaactgtctcacccctaaccctccatactcctttcgtaaacaaacaga 31675656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 120 - 246
Target Start/End: Original strand, 6825372 - 6825498
Alignment:
Q  120 cggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatt 219  Q
    ||||||||| || ||| || |||||||||| |||||||||  ||||||||||||||| |||| |||  |   | ||| || |||||||||||||||||||    
T  6825372 cggcccccaaccgccaacctcccatcctcctcaccataccgcgccaccaacaccctataccataaactactcctctcaaccaacaaacgccaacaccatt 6825471  T
Q  220 tacctaacagagcaatattaaactccc 246  Q
    | ||||| |  ||||||||||||||||    
T  6825472 tgcctaataacgcaatattaaactccc 6825498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 426
Target Start/End: Complemental strand, 42674796 - 42674722
Alignment:
Q  352 tattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    ||||||||||| |||  ||||||||||||| ||||| ||||||||||||||| |||||| |||||||| ||||||    
T  42674796 tattcaataaagattcaatggaagagattacacctgttggagctttgaagaaagaaagagcatagacaggcagag 42674722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 419
Target Start/End: Complemental strand, 14863815 - 14863747
Alignment:
Q  351 ttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||||| ||| |||  |||||||||||||||||| |||||||||| |||||||||||| ||||||||    
T  14863815 ttattcaacaaagattcaatggaagagattatacctaatggagctttaaagaaggaaagagcatagaca 14863747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 419
Target Start/End: Complemental strand, 21739847 - 21739779
Alignment:
Q  351 ttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||||| ||| |||  ||||||||||||||| ||||||||||||| |||||||||||| ||||||||    
T  21739847 ttattcaacaaagattcaatggaagagattataactgatggagctttaaagaaggaaagagcatagaca 21739779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 101 - 281
Target Start/End: Complemental strand, 25024453 - 25024273
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccact 200  Q
    ||||||| |||||||||| || |||||| || ||| || |||  ||||| ||||||| |||||  ||||||||||| |||| ||| |||| |  ||||||    
T  25024453 ccaccaataagaacaactccgacccccaaccgccaacctccctgcctcctcaccatatctagcttccaacaccctataccaaaaaccatctctatccact 25024354  T
Q  201 aacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactccttt 281  Q
    ||||  | |||||||||||| ||| | ||||  | ||||||||||| ||||  | |||| ||||||||||||  |||||||    
T  25024353 aacatcctccaacaccattttccttaaagagataaattaaactcccccaactgcctaactcccaaccctccaagctccttt 25024273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 207 - 295
Target Start/End: Original strand, 34830030 - 34830118
Alignment:
Q  207 cgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacaga 295  Q
    |||||||||||||||||||||| |||| ||||||| ||   |||| || | ||||||||||||||||||||||| |  |||||||||||    
T  34830030 cgccaacaccatttacctaacaaagcactattaaattcatgcaacttcctcacccccaaccctccatactccttacgtaaacaaacaga 34830118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 8130482 - 8130565
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaa 184  Q
    ||||||| |||||| ||| ||||||||| |||||| || ||||||   ||||||||||||||| |||||||||||| |||||||    
T  8130482 ccaccaaaaagaaccactccggcccccaacctccaacctcccatcacgcacaccatacctagcaaccaacaccctataccacaa 8130565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 120 - 295
Target Start/End: Complemental strand, 31920941 - 31920766
Alignment:
Q  120 cggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatt 219  Q
    ||||||||  |||||| || |||  ||||| ||||||| ||  |||||| ||||||| |||| ||| || | |  ||||| ||||  |||||||||||||    
T  31920941 cggccccctacctccaacctccctgcctcctcaccatatctcaccaccagcaccctataccaaaaaccacctctatccaccaacattcgccaacaccatt 31920842  T
Q  220 tacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacaga 295  Q
    ||||||||| ||||   |||||||||||||||    | || || |||||||||||||||||||  |||||||||||    
T  31920841 tacctaacaaagcatggttaaactccctcaactgtctcactcctaaccctccatactcctttcgtaaacaaacaga 31920766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 280
Target Start/End: Complemental strand, 40513312 - 40513154
Alignment:
Q  122 gcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccattta 221  Q
    ||||||| |||||| ||||||| ||  | ||||||||| ||| ||||  |||||| |||| ||| || | |  ||||| ||||  |||||||||||||||    
T  40513312 gcccccaacctccaaccgcccagccgtctcaccataccgagctaccaggaccctataccataaaccacctctatccaccaacatccgccaacaccattta 40513213  T
Q  222 cctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctt 280  Q
    ||||||| |||| ||||||| |||  |||| || | |||||||| || |||||||||||    
T  40513212 cctaacaaagcactattaaaatcctgcaacttcctcacccccaaacccccatactcctt 40513154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 319
Target Start/End: Original strand, 45684815 - 45684925
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatc 308  Q
    |||||||||||||||||  | |||||||||||||||| |||| | | |||||||||| |||||| |||||||| |  |||| | ||||  ||| ||||||    
T  45684815 ccaacaccatttacctagtaaagcaatattaaactccttcaatcgcctaacccccaaacctccaaactccttttttgaacacaaagaatcccaacctatc 45684914  T
Q  309 caagaaatttt 319  Q
    |||| ||||||    
T  45684915 caagtaatttt 45684925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 369 - 426
Target Start/End: Original strand, 23819364 - 23819421
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    |||||||||||||||| ||||||||||||||||||||||||  |||| ||| ||||||    
T  23819364 atggaagagattatacttgatggagctttgaagaaggaaagcgcatatacaggcagag 23819421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 140 - 265
Target Start/End: Original strand, 44888474 - 44888599
Alignment:
Q  140 cccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatatta 239  Q
    |||||||||| ||||||| |  ||||||||||||||| |||||| |  | |    || ||||| || | ||||||||||||||||||||||| || ||||    
T  44888474 cccatcctcctcaccataacgcgccaccaacaccctataccacatactacccttatcaactaataacctccaacaccatttacctaacagagaaacatta 44888573  T
Q  240 aactccctcaacctcataacccccaa 265  Q
    |||||||||| |||| | ||||||||    
T  44888574 aactccctcatcctcctcacccccaa 44888599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 351 - 408
Target Start/End: Original strand, 50545024 - 50545081
Alignment:
Q  351 ttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaa 408  Q
    ||||| |||||| |||  |||||||||||||||||||||||| |||||||||||||||    
T  50545024 ttattaaataaagattcaatggaagagattatacctgatggacctttgaagaaggaaa 50545081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 372 - 409
Target Start/End: Complemental strand, 52907380 - 52907343
Alignment:
Q  372 gaagagattatacctgatggagctttgaagaaggaaag 409  Q
    ||||||||||||||||||||||||||||||||||||||    
T  52907380 gaagagattatacctgatggagctttgaagaaggaaag 52907343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 374 - 419
Target Start/End: Original strand, 53942050 - 53942095
Alignment:
Q  374 agagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||    
T  53942050 agagattatacctgacggagctttgaagaaggaaagagcatagaca 53942095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 291
Target Start/End: Original strand, 23604008 - 23604084
Alignment:
Q  215 ccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaa 291  Q
    |||||| ||||| | || |||||||||||||| ||||||  ||||||||||||| |||| ||||||| |||||||||    
T  23604008 ccatttccctaataaagaaatattaaactcccgcaaccttttaacccccaaccccccattctcctttttcaaacaaa 23604084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 369 - 417
Target Start/End: Original strand, 36731692 - 36731740
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccataga 417  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||||||    
T  36731692 atggaagagattatacctgacggagctttgaaaaaggaaagagcataga 36731740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 30166847 - 30166760
Alignment:
Q  207 cgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacag 294  Q
    |||||||||||||||||||||| |||| ||||||| ||| |||||  | | |||||||| ||||||| ||||||| |  |||||||||    
T  30166847 cgccaacaccatttacctaacaaagcactattaaattccttcaactgcctcacccccaaacctccattctcctttgtggaacaaacag 30166760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 369 - 408
Target Start/End: Complemental strand, 43121015 - 43120976
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaa 408  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  43121015 atggaagagattatacctaatggagctttgaagaaggaaa 43120976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 207 - 289
Target Start/End: Complemental strand, 3271201 - 3271119
Alignment:
Q  207 cgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaaca 289  Q
    ||||| |||||||||||||| |||| || || ||||||| |||| ||| |||| ||||| ||||| | |||||||||||||||    
T  3271201 cgccaccaccatttacctaagagagtaagataaaactccttcaaactcctaacacccaaacctccctcctcctttctcaaaca 3271119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 8130771 - 8130821
Alignment:
Q  368 tatggaagagattatacctgatggagctttgaagaaggaaagaccatagac 418  Q
    ||||||||||||| |||||| |||||| ||||||||||||||| |||||||    
T  8130771 tatggaagagattctacctgctggagccttgaagaaggaaagagcatagac 8130821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 415
Target Start/End: Original strand, 10868443 - 10868489
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccata 415  Q
    ||||||||||||||||||||| ||||||| |||||||||||| ||||    
T  10868443 atggaagagattatacctgatagagctttaaagaaggaaagagcata 10868489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 419
Target Start/End: Original strand, 18381847 - 18381897
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||||| ||||||||||||||||||||||| ||||||| | ||||||||    
T  18381847 atggaagatattatacctgatggagctttgaaaaaggaaatagcatagaca 18381897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 508
Target Start/End: Complemental strand, 6175812 - 6175679
Alignment:
Q  375 gagattatacctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaagga 474  Q
    ||||||||||||| ||||| |||||||||||||||  |||||||| ||||||   | | || ||| ||||| ||||| |  |||||||| ||||| || |    
T  6175812 gagattatacctgttggagttttgaagaaggaaagtgcatagacaggcagagatgtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaa 6175713  T
Q  475 atcaaatatgccaaccagacaatctagatttaat 508  Q
    | | | ||| |||||| |||| ||||||||||||    
T  6175712 accgactattccaacccgacagtctagatttaat 6175679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 374 - 419
Target Start/End: Original strand, 31675735 - 31675780
Alignment:
Q  374 agagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    ||||||||||||||| ||||||||||||||||||||  ||||||||    
T  31675735 agagattatacctgacggagctttgaagaaggaaagggcatagaca 31675780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 374 - 419
Target Start/End: Complemental strand, 40513060 - 40513015
Alignment:
Q  374 agagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    ||||||||||||||| ||||| ||||||||||||||| ||||||||    
T  40513060 agagattatacctgacggagccttgaagaaggaaagagcatagaca 40513015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 281
Target Start/End: Complemental strand, 1231725 - 1231653
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactccttt 281  Q
    |||||||||||| || |||| || || ||||||||| || |||||| ||||||||||||| |||| |||||||    
T  1231725 ccaacaccatttccccaacaaagaaaaattaaactctcttaacctcctaacccccaaccccccatcctccttt 1231653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 16672360 - 16672312
Alignment:
Q  371 ggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||| ||||||||||| ||||| ||||||||||||||| ||||||||    
T  16672360 ggaagaaattatacctgacggagccttgaagaaggaaagaacatagaca 16672312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 30166662 - 30166614
Alignment:
Q  371 ggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||| |||||||||||||||||||||||||| |||||  ||||||||    
T  30166662 ggaagaaattatacctgatggagctttgaagaaagaaagggcatagaca 30166614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 265
Target Start/End: Original strand, 31548017 - 31548073
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaa 265  Q
    |||||||||||| |||||||||| || |||||||||||||| |||| | ||||||||    
T  31548017 ccaacaccattttcctaacagagaaacattaaactccctcatcctcctcacccccaa 31548073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 472
Target Start/End: Complemental strand, 1709683 - 1709592
Alignment:
Q  381 atacctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaag 472  Q
    |||||| ||||||||||||||||||||||| ||||||||   || |   | ||||||||||| |||||||| ||  ||||||| ||||||||    
T  1709683 ataccttatggagctttgaagaaggaaagagcatagacaaaaagtgaggtcatgatagacttaaggagaacaaggtgaccaccaaaagaaag 1709592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 508
Target Start/End: Original strand, 16179739 - 16179878
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaag 468  Q
    ||||||||||||||||||||  |||||||||| ||||||||  |||||||| | || ||||| | || ||| ||||| ||    |  | |||||| || |    
T  16179739 atggaagagattatacctgacagagctttgaaaaaggaaagtgcatagacaggaagtgcaatcaggacagatttgagaagggtcaacctaccaccaaagg 16179838  T
Q  469 aaaggaatcaaatatgccaaccagacaatctagatttaat 508  Q
    |||||||   | ||||||||| ||||||||||||||||||    
T  16179839 aaaggaactgactatgccaactagacaatctagatttaat 16179878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 419
Target Start/End: Complemental strand, 25388218 - 25388163
Alignment:
Q  364 attttatggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||| |||||||||||||||||| |  ||||||||||||| |||||| ||||||||    
T  25388218 atttaatggaagagattatacctaaaagagctttgaagaaagaaagagcatagaca 25388163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 419
Target Start/End: Original strand, 47538069 - 47538116
Alignment:
Q  372 gaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||||||||| ||||||||| |||||||||||||||  ||||||||    
T  47538069 gaagagattatatctgatggagttttgaagaaggaaagcgcatagaca 47538116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 419
Target Start/End: Original strand, 55367407 - 55367458
Alignment:
Q  368 tatggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    ||||||||||||||||||||| | ||||||||| ||||||||| | ||||||    
T  55367407 tatggaagagattatacctgacgcagctttgaaaaaggaaagagcgtagaca 55367458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 254
Target Start/End: Complemental strand, 17077868 - 17077754
Alignment:
Q  140 cccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatatta 239  Q
    ||||||||| || || |||||||||||||  ||| ||| ||||||  |||| | ||| |||||||| | | |||||||||| || |||| | || | |||    
T  17077868 cccatcctctactccgtacctagccaccagaaccttacgccacaacccatctctctctactaacaacctctaacaccattttcccaacaaaacagtgtta 17077769  T
Q  240 aactccctcaacctc 254  Q
    |||||||||||||||    
T  17077768 aactccctcaacctc 17077754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 282
Target Start/End: Original strand, 55367249 - 55367321
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttc 282  Q
    |||||||||||| |||||||  |||| |||||| ||| ||||| || | ||||||||||| |||||||||||||    
T  55367249 ccaacaccattttcctaacaacgcaagattaaattccttcaacttcctcacccccaaccc-ccatactcctttc 55367321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 122; Significance: 7e-62; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 7e-62
Query Start/End: Original strand, 87 - 508
Target Start/End: Original strand, 6051120 - 6051541
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||||||||||||||||||||||| |||||| | | |||||||     
T  6051120 ctcacaatctccctccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaag 6051219  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaa 286  Q
    |||| | ||||| |||||| | ||||||||||||||| |||| |||||| ||||||||| |||||||| ||||||||||||||||||||||||| ||||     
T  6051220 catcccgctccaataacaacctccaacaccatttacccaacaaagcaatgttaaactccttcaacctcttaacccccaaccctccatactccttcctcat 6051319  T
Q  287 acaaacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacct 386  Q
    ||  | ||||  ||| |  | |||||| ||||| || | | |||||| |||   ||        ||||| || ||| |||  ||||||||||||||||||    
T  6051320 actcaaagaatcccacctaacccaagatatttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacct 6051419  T
Q  387 gatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgcc 486  Q
    |  ||||||||||||||||||||  |||||||| | |||||| | | || |||||| || ||||  | ||||||||||||||| ||||| | | | ||||    
T  6051420 gtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaacgaccaccgaaagataggaaccgactttgcc 6051519  T
Q  487 aaccagacaatctagatttaat 508  Q
    ||||||||||||||||||||||    
T  6051520 aaccagacaatctagatttaat 6051541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 5e-38
Query Start/End: Original strand, 140 - 285
Target Start/End: Original strand, 35541604 - 35541749
Alignment:
Q  140 cccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatatta 239  Q
    ||||||||||||||||||||||||||| |||||| | | ||||||| |||| | ||||| |||||| | ||||||||||||||| |||| |||||| |||    
T  35541604 cccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacaccatttacccaacaaagcaatgtta 35541703  T
Q  240 aactccctcaacctcataacccccaaccctccatactcctttctca 285  Q
    ||||||||||||||| ||||||||||||||||||||| ||| ||||    
T  35541704 aactccctcaacctcttaacccccaaccctccatacttcttcctca 35541749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 2e-31
Query Start/End: Original strand, 87 - 281
Target Start/End: Complemental strand, 47622700 - 47622506
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||||||||| | ||||||| |||||||||| ||||||| ||||||||  |  |||||| |||||||||||||||||||||||||| |||  || ||      
T  47622700 ctcactatctctctccaccaagaagaacaactccggcccctatcctccaaacctccatccaccacaccatacctagccaccaacaccttacgtcataacc 47622601  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactccttt 281  Q
    | || |  || ||||||||||| ||||| ||||| |||||||| || ||||||||||| | ||||||| ||||  ||||||||||||||||||||    
T  47622600 cttccctatcaactaacaaacgtcaacatcattttcctaacagggctatattaaactctcccaacctcctaacagccaaccctccatactccttt 47622506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 209 - 419
Target Start/End: Complemental strand, 49264465 - 49264256
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatc 308  Q
    |||||||||||||||||||| | |||  |||||||||||||||||| ||||||||||||||||| ||||||||    |||| | || |  ||| ||||||    
T  49264465 ccaacaccatttacctaacaaaacaaagttaaactccctcaacctcctaacccccaaccctccagactcctttggagaacacaaagtattccaacctatc 49264366  T
Q  309 caagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaa 408  Q
    |||| |||||||| | |  |||||| ||||  ||        |||||||| ||| |||  ||||||||||||||||||||||||||||| ||||| ||||    
T  49264365 caagtaattttccgacggtcctcactcccc-cccaaaaaaagttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaagaaa 49264267  T
Q  409 gaccatagaca 419  Q
    || ||||||||    
T  49264266 gagcatagaca 49264256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 209 - 419
Target Start/End: Original strand, 20796296 - 20796509
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatc 308  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||| |||||| ||||||||    |||| | || |  ||| ||||||    
T  20796296 ccaacaccatttacctaacaaagcaaaattaaactccctcaacctcctaacccccaatcctccagactcctttggagaacacaaagtattccaacctatc 20796395  T
Q  309 caagaaattttcctatgtccctcacaccccttccnnnnnnnn-----ttattcaataaatattttatggaagagattatacctgatggagctttgaagaa 403  Q
    |||| |||||||| |||  |||| | ||||  ||             |||||||| ||| |||  ||||||||||||||||||||||||||||| |||||    
T  20796396 caagtaattttccgatggtcctcccccccc--ccaaaaaaaaaaaaattattcaacaaagattcaatggaagagattatacctgatggagctttaaagaa 20796493  T
Q  404 ggaaagaccatagaca 419  Q
    ||||||| ||||||||    
T  20796494 ggaaagagcatagaca 20796509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 369 - 426
Target Start/End: Original strand, 26721432 - 26721489
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||    
T  26721432 atggaagagattatacctgatggagctttgaagaaggaaagcgcatagacaggcagag 26721489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 7396059 - 7396011
Alignment:
Q  371 ggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7396059 ggaagagattatacctgatggagctttgaagaaggaaagatcatagaca 7396011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 209 - 281
Target Start/End: Original strand, 39430916 - 39430988
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactccttt 281  Q
    ||||||||| |||||||||| ||||  ||||||||||||||||||| ||||||| ||||||||| ||||||||    
T  39430916 ccaacaccacttacctaacaaagcacaattaaactccctcaacctcctaacccctaaccctccagactccttt 39430988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 207 - 295
Target Start/End: Original strand, 45795912 - 45796000
Alignment:
Q  207 cgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacaga 295  Q
    |||||||||||||||||||||| |||| ||||||| |||  |||| || | ||||||||||||||||||||||| |  |||||||||||    
T  45795912 cgccaacaccatttacctaacaaagcactattaaattcctgcaacttcctcacccccaaccctccatactccttacgtaaacaaacaga 45796000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 17708859 - 17708914
Alignment:
Q  371 ggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||| ||||||    
T  17708859 ggaagagattatacctgatggagctttgaagaaggaaagtgcatagacaggcagag 17708914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 324
Target Start/End: Complemental strand, 32352867 - 32352696
Alignment:
Q  153 ccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacc 252  Q
    ||||||||||| || || |||||| |||||||| || | |  ||||| ||||  |||||||||||||| ||||||| ||| | |||||||||| ||||      
T  32352867 ccatacctagcgactaaaaccctataccacaaaccacctctatccaccaacatccgccaacaccattttcctaacaaagctaaattaaactccttcaatt 32352768  T
Q  253 tcataacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatccaagaaattttcctat 324  Q
    || | |||||||| || |||||||||||| | ||||||||||    ||| | || |||||||||||||||||    
T  32352767 tcctcacccccaaaccgccatactccttttttaaacaaacagtttgccaacttaaccaagaaattttcctat 32352696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 369 - 508
Target Start/End: Complemental strand, 47622418 - 47622279
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaag 468  Q
    ||||||||||||||| |||| ||||||||||| ||||||||  |||||||| | |||||| | | || |||||| || || |  || |||||||| ||||    
T  47622418 atggaagagattatatctgacggagctttgaaaaaggaaagtgcatagacaggaagagcagtcaggacagactttagaaggattaggcgaccaccaaaag 47622319  T
Q  469 aaaggaatcaaatatgccaaccagacaatctagatttaat 508  Q
    | || || | | || |||||||||||||||||||||||||    
T  47622318 agagaaaccgactacgccaaccagacaatctagatttaat 47622279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 390 - 508
Target Start/End: Original strand, 51052701 - 51052819
Alignment:
Q  390 ggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgccaac 489  Q
    ||||||||||||||||||||  |||||||| | |||||| | | ||  ||||| || ||||  | ||||||||||||||| ||||| | | | |||||||    
T  51052701 ggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacggactttagtagaatcaaacgaccaccgaaagataggaaccgactttgccaac 51052800  T
Q  490 cagacaatctagatttaat 508  Q
    |||||||||||||||||||    
T  51052801 cagacaatctagatttaat 51052819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 120 - 265
Target Start/End: Complemental strand, 22191372 - 22191227
Alignment:
Q  120 cggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatt 219  Q
    ||||||||| || ||| || |||||||||| ||||||| |  ||||||||||||||| |||||| |  | |    || ||||| || | |||||||||||    
T  22191372 cggcccccaaccaccaacctcccatcctcctcaccataacacgccaccaacaccctataccacatactacccttatcaactaataacctccaacaccatt 22191273  T
Q  220 tacctaacagagcaatattaaactccctcaacctcataacccccaa 265  Q
    |||||||||||| || |||||||||||||| |||| | ||||||||    
T  22191272 tacctaacagagaaacattaaactccctcatcctcctcacccccaa 22191227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 207 - 272
Target Start/End: Original strand, 45270878 - 45270943
Alignment:
Q  207 cgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctcca 272  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||   |||||||| ||||||    
T  45270878 cgccaacaccatttacctaacaatgcaatattaaactccctcaacctctgcacccccaaacctcca 45270943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 376 - 472
Target Start/End: Complemental strand, 33260036 - 33259940
Alignment:
Q  376 agattatacctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaag 472  Q
    |||| |||||||| ||||||||||||||||||||| |||||||| | ||||  || | || |||||| || ||||| ||||||||||| ||||||||    
T  33260036 agatgatacctgagggagctttgaagaaggaaagagcatagacagggagagagatcaagacagacttaagaagaacaagacgaccaccaaaagaaag 33259940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 376 - 472
Target Start/End: Complemental strand, 33280195 - 33280099
Alignment:
Q  376 agattatacctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaag 472  Q
    |||| |||||||| ||||||||||||||||||||| |||||||| | ||||  || | || |||||| || ||||| ||||||||||| ||||||||    
T  33280195 agatgatacctgagggagctttgaagaaggaaagagcatagacagggagagagatcaagacagacttaagaagaacaagacgaccaccaaaagaaag 33280099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 419
Target Start/End: Original strand, 39431067 - 39431135
Alignment:
Q  351 ttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||||| ||| |||  ||||||||||||||||||||||||||||| || ||||||||| ||||||||    
T  39431067 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaataaggaaagagcatagaca 39431135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 28358695 - 28358742
Alignment:
Q  374 agagattatacctgatggagctttgaagaaggaaagaccatagacatg 421  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  28358695 agagattatacctgacggagctttgaagaaggaaagagcatagacatg 28358742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 369 - 407
Target Start/End: Complemental strand, 10710544 - 10710506
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaa 407  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10710544 atggaagagattatacctgatggagctttgaagaaggaa 10710506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 122 - 275
Target Start/End: Complemental strand, 13867421 - 13867268
Alignment:
Q  122 gcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccattta 221  Q
    ||||||| |||||| ||||||| ||  | ||||||||| ||| ||||  |||||| |||| ||| || | |  ||||| ||||  |||||||||||||||    
T  13867421 gcccccaacctccaaccgcccagccgtctcaccataccgagctaccaggaccctataccataaaccacctctatccaccaacatccgccaacaccattta 13867322  T
Q  222 cctaacagagcaatattaaactccctcaacctcataacccccaaccctccatac 275  Q
    ||||||| |||| ||||||| |||  |||| || | |||||||| |||||||||    
T  13867321 cctaacaaagcactattaaattcctgcaacttcctcacccccaaacctccatac 13867268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 375 - 508
Target Start/End: Complemental strand, 32352647 - 32352514
Alignment:
Q  375 gagattatacctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaagga 474  Q
    ||||||||||||| |||||||||||||||||||||  |||||||| ||||||   | | || ||| ||||| ||||| |  |||||||| ||||| || |    
T  32352647 gagattatacctgctggagctttgaagaaggaaagtgcatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaa 32352548  T
Q  475 atcaaatatgccaaccagacaatctagatttaat 508  Q
    | | | ||| |||||| |||| ||||||||||||    
T  32352547 accgactattccaacccgacagtctagatttaat 32352514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 375 - 508
Target Start/End: Complemental strand, 48072761 - 48072628
Alignment:
Q  375 gagattatacctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaagga 474  Q
    ||||||||||||| |||||||||||||||||||||  |||||||| ||||||   | | || ||| ||||| ||||| |  |||||||| ||||| || |    
T  48072761 gagattatacctgctggagctttgaagaaggaaagcgcatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaa 48072662  T
Q  475 atcaaatatgccaaccagacaatctagatttaat 508  Q
    | | | ||| |||||| |||| ||||||||||||    
T  48072661 accgactattccaacccgacagtctagatttaat 48072628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 374 - 426
Target Start/End: Original strand, 3074548 - 3074600
Alignment:
Q  374 agagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    |||||||||||||||||||||| |||||||||||||  |||||||||| ||||    
T  3074548 agagattatacctgatggagctctgaagaaggaaagggcatagacatgaagag 3074600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 295
Target Start/End: Complemental strand, 3544691 - 3544516
Alignment:
Q  120 cggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatt 219  Q
    ||||||||  |||||| || |||  ||||| ||||||| || || |||| ||||||| |||| ||| |||| |  || || ||||  |||||||||||||    
T  3544691 cggccccctacctccaacctccctgcctcctcaccatatctcgctaccagcaccctataccaaaaaccatctctatctaccaacattcgccaacaccatt 3544592  T
Q  220 tacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacaga 295  Q
    ||||||||| | ||  |||||||||||||| |    | || |||||||||||||||||||||   |||||||||||    
T  3544591 tacctaacaaaacacaattaaactccctcagctatctcactcccaaccctccatactccttttgtaaacaaacaga 3544516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 376 - 419
Target Start/End: Original strand, 5809387 - 5809430
Alignment:
Q  376 agattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||    
T  5809387 agattatacctgacggagctttgaagaaggaaagagcatagaca 5809430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 369 - 428
Target Start/End: Original strand, 35541833 - 35541892
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagagca 428  Q
    |||||||||||||||||||| ||||||||||| ||||||||  |||||||| | ||||||    
T  35541833 atggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagca 35541892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 295
Target Start/End: Complemental strand, 1248087 - 1248001
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacaga 295  Q
    ||||||| |||||||||||| |||| ||||||||||||| |||  | | ||||| ||||| ||||||||||||   |||||||||||    
T  1248087 ccaacactatttacctaacaaagcactattaaactcccttaactgcctcacccctaaccccccatactccttttgtaaacaaacaga 1248001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 419
Target Start/End: Complemental strand, 19014324 - 19014274
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    ||||||||||||||| ||||  |||||||||||||||||||| ||||||||    
T  19014324 atggaagagattatatctgacagagctttgaagaaggaaagagcatagaca 19014274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 375 - 469
Target Start/End: Complemental strand, 22191117 - 22191023
Alignment:
Q  375 gagattatacctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaaga 469  Q
    ||||||||||||||||| ||| |||||||||||| | |||||||| | |||| |   | || |||||| |||||||| ||||||||||| |||||    
T  22191117 gagattatacctgatggtgctctgaagaaggaaaaagcatagacaggaagagaagacaagacagacttaaggagaaccagacgaccaccaaaaga 22191023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 33142782 - 33142652
Alignment:
Q  141 ccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaa 240  Q
    ||||||||| |||| || |  ||||||||||||||| |||||||  | || |  || |||||||| | |||||||||||||||||| ||||| | |||||    
T  33142782 ccatcctcctcaccgtaacgggccaccaacaccctataccacaagccttctctatcaactaacaacctccaacaccatttacctaagagagccaaattaa 33142683  T
Q  241 actccctcaacctcataacccccaaccctcc 271  Q
    | || |||| |||| | |||||||| |||||    
T  33142682 attctctcatcctcctcacccccaatcctcc 33142652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 374 - 419
Target Start/End: Complemental strand, 3544437 - 3544392
Alignment:
Q  374 agagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    ||||||||||||||| ||||||||||||||||||||  ||||||||    
T  3544437 agagattatacctgacggagctttgaagaaggaaagggcatagaca 3544392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 408
Target Start/End: Original strand, 5497891 - 5497924
Alignment:
Q  375 gagattatacctgatggagctttgaagaaggaaa 408  Q
    ||||||||||||||||||||||||||||||||||    
T  5497891 gagattatacctgatggagctttgaagaaggaaa 5497924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 15174791 - 15174746
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctc 254  Q
    ||||||||| || ||||||||||||| |||||||||||||||||||    
T  15174791 ccaacaccacttccctaacagagcaacattaaactccctcaacctc 15174746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 374 - 419
Target Start/End: Complemental strand, 25504328 - 25504283
Alignment:
Q  374 agagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    ||||||||||||||| |||||||||||||| |||||| ||||||||    
T  25504328 agagattatacctgacggagctttgaagaaagaaagagcatagaca 25504283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 281
Target Start/End: Complemental strand, 13112789 - 13112717
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactccttt 281  Q
    |||||||||||| || |||| || || ||||||||| || |||||| ||||||||||||| |||| |||||||    
T  13112789 ccaacaccatttccccaacaaagaaaaattaaactctcttaacctcctaacccccaaccccccatcctccttt 13112717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 26131910 - 26131946
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactcc 245  Q
    |||||||||||||||||||||||||| ||||||||||    
T  26131910 ccaacaccatttacctaacagagcaacattaaactcc 26131946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 45271042 - 45271090
Alignment:
Q  371 ggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||| ||||||||||| ||||| ||||||||||||||| ||||||||    
T  45271042 ggaagaaattatacctgacggagccttgaagaaggaaagagcatagaca 45271090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 418
Target Start/End: Complemental strand, 5283212 - 5283169
Alignment:
Q  375 gagattatacctgatggagctttgaagaaggaaagaccatagac 418  Q
    ||||| |||||||| ||||||||||||||||||||| |||||||    
T  5283212 gagatgatacctgaaggagctttgaagaaggaaagatcatagac 5283169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 325
Target Start/End: Complemental strand, 25504509 - 25504379
Alignment:
Q  195 tccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacag 294  Q
    ||||||||||  | |||||||||||| ||||  |  ||||||||||||||| |||||    ||||||| ||||||||| |||||||    | ||||||||    
T  25504509 tccactaacatcctccaacaccatttccctagtaaggcaatattaaactccatcaactgtctaacccctaaccctccaaactccttctggagacaaacag 25504410  T
Q  295 aagaccatcctatccaagaaattttcctatg 325  Q
    |   ||| ||||||||||| |||||||||||    
T  25504409 agctccaacctatccaagatattttcctatg 25504379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 369 - 419
Target Start/End: Original strand, 48434949 - 48434999
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||||||||||||||||  ||||||||||| ||||||||| | ||||||    
T  48434949 atggaagagattatacctgcgggagctttgaaaaaggaaagagcgtagaca 48434999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 3074384 - 3074429
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctc 254  Q
    |||||||||||| |||||||||| || |||||||||||||| ||||    
T  3074384 ccaacaccattttcctaacagagaaacattaaactccctcatcctc 3074429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 374 - 415
Target Start/End: Complemental strand, 13867176 - 13867135
Alignment:
Q  374 agagattatacctgatggagctttgaagaaggaaagaccata 415  Q
    ||||||||||||||| ||||| ||||||||||||||| ||||    
T  13867176 agagattatacctgacggagccttgaagaaggaaagagcata 13867135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 374 - 419
Target Start/End: Original strand, 20987959 - 20988004
Alignment:
Q  374 agagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||| |||| ||| ||||||||||||||||||||| ||||||||    
T  20987959 agagatgatacatgacggagctttgaagaaggaaagagcatagaca 20988004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 21405476 - 21405521
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctc 254  Q
    |||||||||||| |||||||||| || |||||||||||||| ||||    
T  21405476 ccaacaccattttcctaacagagaaacattaaactccctcatcctc 21405521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 44692059 - 44692104
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctc 254  Q
    ||||||||| ||||| |||| ||| |||||||||||||||||||||    
T  44692059 ccaacaccacttaccaaacaaagctatattaaactccctcaacctc 44692104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 121; Significance: 3e-61; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 121; E-Value: 3e-61
Query Start/End: Original strand, 84 - 508
Target Start/End: Original strand, 58 - 482
Alignment:
Q  84 attctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccaca 183  Q
    ||||| |||||||||| ||||||| |||| ||||||||||||||||||||||  |  ||||||||||||||||||||| ||||||||||| ||| |||||    
T  58 attctgactatctccctccaccaagaagagcaacttcggcccccatcctccaaaccaccatcctccacaccatacctaaccaccaacaccttacgccaca 157  T
Q  184 aatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttct 283  Q
    |  |||| |  || |||||||| | |||||||||||| ||||||| |||||| |||||||| ||||||||| |||| |||||||||||||||||| | ||    
T  158 atccatctctatctactaacaacctccaacaccatttccctaacaaagcaatgttaaactctctcaacctcctaacacccaaccctccatactccctcct 257  T
Q  284 caaacaaacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattata 383  Q
    |||||| | ||||  ||| || |||||||||||||| || | | ||||||  |||  ||        ||||| || ||| |||  || ||||||||||||    
T  258 caaacacaaagaattccaaccaatccaagaaatttttcttttttcctcactacccccccaaaaaaatttatttaacaaagattcaattgaagagattata 357  T
Q  384 cctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatat 483  Q
    | ||| ||||||||||| ||||||||| |||||||| | || ||| ||| ||  || ||||| ||||  || |||||||| || || ||||| | | |||    
T  358 cttgacggagctttgaaaaaggaaagagcatagacaggaagcgcagttaggacggatttgagaagaatcaggcgaccaccaaaggagaggaaccgactat 457  T
Q  484 gccaaccagacaatctagatttaat 508  Q
    |||||||||| ||||||||||||||    
T  458 gccaaccagaaaatctagatttaat 482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 118; Significance: 2e-59; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 118; E-Value: 2e-59
Query Start/End: Original strand, 87 - 508
Target Start/End: Original strand, 42514237 - 42514658
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||||||||||||||||||||||| |||||| | | |||||||     
T  42514237 ctcacaatctccctccaccacgaagaacaactccggcccccatcctccaaactgccatcctccacaccatacctagccactaacacctttctccacaaag 42514336  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaa 286  Q
    |||| | ||| | |||||| | ||||||| ||||||| |||| |||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||     
T  42514337 catccctctctaataacaacctccaacacaatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatactccttcctcat 42514436  T
Q  287 acaaacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacct 386  Q
    ||  | ||||  ||| |  | |||||| ||||| || | | |||||| |||   ||        ||||| || ||| |||  ||||||||||||||||||    
T  42514437 actcaaagaatcccacctaacccaagatatttttcttttttcctcaccccctccccagaaaaatttattaaacaaagattcaatggaagagattatacct 42514536  T
Q  387 gatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgcc 486  Q
    |  ||||||||||||||||||||  |||||||| | |||||| | | || |||||| || ||||  | ||||||||||||||| ||||| | | | ||||    
T  42514537 gtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaacgaccaccgaaagataggaaccgactttgcc 42514636  T
Q  487 aaccagacaatctagatttaat 508  Q
    ||||||||||||||||||||||    
T  42514637 aaccagacaatctagatttaat 42514658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 9e-49
Query Start/End: Original strand, 74 - 289
Target Start/End: Original strand, 33170162 - 33170377
Alignment:
Q  74 cccatcccggattctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacacc 173  Q
    ||||||||  || ||||||||||||| ||||||| | |||||||| ||||||||||||||||  |  |||||| || |||||||||||||||| ||||||    
T  33170162 cccatccctaatcctcactatctcccgccaccaagatgaacaactccggcccccatcctccaaaccaccatccgccgcaccatacctagccactaacacc 33170261  T
Q  174 ctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccat 273  Q
    |||| ||||||  |||| | ||| |||||||| | |||||||||||| ||||||| ||||||||||||||||||||| ||| |||| |||| ||||||||    
T  33170262 ctacgccacaacccatctctctctactaacaacctccaacaccattttcctaacaaagcaatattaaactccctcaaactcctaacacccatccctccat 33170361  T
Q  274 actcctttctcaaaca 289  Q
    ||||||| ||||||||    
T  33170362 actccttcctcaaaca 33170377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 87 - 508
Target Start/End: Complemental strand, 30731937 - 30731516
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||||||||||||||||||||||| || |||   | |||||||     
T  30731937 ctcacaatctccctccaccatgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaatacctgtctccacaaag 30731838  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaa 286  Q
    |||| | ||||| |||||| | ||||||||||||||| |||| |||||| |||||||||||||||||| |||| |||||||||||||||||||| ||||     
T  30731837 catccctctccaataacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaactcccaaccctccatactccttcctcat 30731738  T
Q  287 acaaacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacct 386  Q
    ||  | ||    ||| |  | |||||| ||||| || | | |||||| |||   ||        ||||| || ||| |||  ||||||||||||||||||    
T  30731737 actcaaagtctcccacctaacccaagatatttttcttttttcctcactccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacct 30731638  T
Q  387 gatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgcc 486  Q
    |  ||||||||||||||||||||  |||||||| | |||||| | | ||  ||||| || ||||  | ||||||||||||||| ||||| | | | | ||    
T  30731637 gtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacggactttagtagaatcaaacgaccaccgaaagataggaaccgacttttcc 30731538  T
Q  487 aaccagacaatctagatttaat 508  Q
    ||||||||||||||||||||||    
T  30731537 aaccagacaatctagatttaat 30731516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 87 - 506
Target Start/End: Original strand, 23238900 - 23239319
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||||||||||| ||||||  | |||||||| ||||||||| ||||||  |  |||||| ||||||||||||||||||| |||||| | | |||||||     
T  23238900 ctcactatctccctccaccacgacgaacaactccggcccccaacctccaaacctccatccgccacaccatacctagccactaacacctttctccacaaag 23238999  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaa 286  Q
      || | ||||| |||||| || |||||||||||||| |||| |||||| || ||||||||||| ||| ||||||||||||||||||||||||| | |||    
T  23239000 attccctctccaataacaaccgtcaacaccatttacccaacaaagcaatgttgaactccctcaatctcgtaacccccaaccctccatactccttccgcaa 23239099  T
Q  287 acaaacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacct 386  Q
    ||  | || |  ||| |  | |||||| ||||| || | | |||||| |||   ||        ||||| || ||| |||  ||||||||||||||||||    
T  23239100 actcaaagtatcccacctaacccaagatatttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacct 23239199  T
Q  387 gatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaa-cgagacgaccaccgaaagaaaggaatcaaatatgc 485  Q
    || ||||||||||| ||||||||  |||||||| | |||||| | | ||  ||||| || |||| ||| ||||||||||||||||||||| | | | |||    
T  23239200 gacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaatcga-acgaccaccgaaagaaaggaaccgactttgc 23239298  T
Q  486 caaccagacaatctagattta 506  Q
    |||||||||||||||||||||    
T  23239299 caaccagacaatctagattta 23239319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 87 - 285
Target Start/End: Complemental strand, 27116796 - 27116598
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  ||||||||||| |||||||||||||| |||||| | | ||||||      
T  27116796 ctcacgatctccctccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacgccatacctagccactaacacctttctccacaacg 27116697  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctca 285  Q
    ||||   ||||| |||||| | ||||||||||||||| |||| |||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  27116696 catcctgctccaataacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatactccttcctca 27116598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 87 - 500
Target Start/End: Complemental strand, 28535298 - 28534886
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||||||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||| |||||||||||||||||||||||||| | | |||||||     
T  28535298 ctcactatctccctccaccatgaagaacaactccggcccccatcctccaaacctccatccgccacaccatacctagccaccaacacctttctccacaaag 28535199  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaa 286  Q
    | ||   ||||| |||||| ||||||||||||||||| |||| ||| | ||||||||| ||||||||| ||||||||||||||||||||| ||| |||||    
T  28535198 cttccttctccaataacaaccgccaacaccatttacccaaca-agctaaattaaactctctcaacctcgtaacccccaaccctccatacttcttcctcaa 28535100  T
Q  287 acaaacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttc-cnnnnnnnnttattcaataaatattttatggaagagattatacc 385  Q
    ||  | || |  ||| |  || ||||||||||| || |   |||||| ||||| | |        ||||| || ||| |||  |||||||||||||||||    
T  28535099 actcaaagtatcccacctaattcaagaaatttttcttttatcctcac-cccctcctcaaaaaaatttattaaacaaagattcaatggaagagattatacc 28535001  T
Q  386 tgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgc 485  Q
    ||| ||||||||||| ||||||||  |||||||| | |||||| | | ||  ||||| || ||||  | ||||||||| ||||||||||| | | | |||    
T  28535000 tgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggacttaagaagaatcaaacgaccaccaaaagaaaggaaccgactttgc 28534901  T
Q  486 caaccagacaatcta 500  Q
    ||||| |||||||||    
T  28534900 caacctgacaatcta 28534886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 87 - 285
Target Start/End: Original strand, 42928648 - 42928846
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    |||||||||| || ||||||  |||||||||| ||||||||||||||||  |  |||||| ||||| |||||||||||||||||||||||||||| |||     
T  42928648 ctcactatctgcctccaccacgaagaacaactccggcccccatcctccaaacctccatccgccacatcatacctagccaccaacaccctacaccataaag 42928747  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctca 285  Q
    | || |  || | |||||| ||||||||||| || || |||| ||||||||||||||| ||||||||| |||| |||| ||||||||||||||| ||||    
T  42928748 cttccctatctattaacaatcgccaacaccactttcccaacaaagcaatattaaactctctcaacctcctaacacccatccctccatactccttcctca 42928846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 5e-38
Query Start/End: Original strand, 95 - 508
Target Start/End: Original strand, 27796009 - 27796422
Alignment:
Q  95 ctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccc 194  Q
    ||||| ||||||  ||||||||||  |||||||||||||||  |  |||||| |||||||||||||||||||||||||||||| ||| ||  | || |      
T  27796009 ctccctccaccacgaagaacaactctggcccccatcctccaaaccaccatccgccacaccatacctagccaccaacaccctacgccataacccctctcta 27796108  T
Q  195 tccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacag 294  Q
    || |||||||| |||||||||||||| |||| || |||||| |||||||  ||||| |||  ||| |||||||| ||||||||| | |||||||| | ||    
T  27796109 tcaactaacaaccgccaacaccatttccctagcaaagcaatgttaaacttgctcaatctccgaacacccaaccccccatactccctcctcaaacacaaag 27796208  T
Q  295 aagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacctgatggagc 394  Q
    ||  ||| || | |||  | ||||| || | | ||||||| |||  ||        ||||| || ||| |||  |||||||||||||||||||| |||||    
T  27796209 aatgccaaccaacccacaatatttttcttttttcctcacaacccccccaaaaaaaattatttaacaaagattcaatggaagagattatacctgacggagc 27796308  T
Q  395 tttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgccaaccagac 494  Q
    |||||| ||||||||  |||||||| | || ||| | | ||   | ||||| ||||  ||||||||||| ||||||||||| | | ||||||||||||||    
T  27796309 tttgaaaaaggaaagtgcatagacaggaagtgcagtcaggacgaatttgagaagaattagacgaccaccaaaagaaaggaaccgactatgccaaccagac 27796408  T
Q  495 aatctagatttaat 508  Q
    ||||||| ||||||    
T  27796409 aatctagttttaat 27796422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 5e-38
Query Start/End: Original strand, 87 - 288
Target Start/End: Complemental strand, 35983414 - 35983213
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||| || ||||||||||||||||||||||| | | |||||||     
T  35983414 ctcacaatctccctccaccacgaagaacaactccggcccccatcctccaaacctccatccgcctcaccatacctagccaccaacacctttctccacaaag 35983315  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaa 286  Q
    | ||   ||||| |||||| ||||||||||||||| | |||| ||| | |||||||||  |||||||| ||||||||||||||||||||||||| |||||    
T  35983314 cttccttctccaataacaaccgccaacaccatttatccaacaaagctaaattaaactctttcaacctcgtaacccccaaccctccatactccttcctcaa 35983215  T
Q  287 ac 288  Q
    ||    
T  35983214 ac 35983213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 2e-34
Query Start/End: Original strand, 87 - 502
Target Start/End: Complemental strand, 8299805 - 8299391
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  ||||||||||| ||||||||||||| ||||||||||| |||||||     
T  8299805 ctcacaatctccctccaccacaaagaacaactccggcccccatcctccaaaccaccatcctccacgccatacctagccaacaacaccctactccacaaac 8299706  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaa 286  Q
    |  | |  || |||||||  | |||||||||||| || |||| |||||| |||||||| | ||||||| |||| |||||||||||||||||| | |||||    
T  8299705 ctcccctatcaactaacagcctccaacaccatttccccaacaaagcaatgttaaactctcgcaacctcctaacacccaaccctccatactccctcctcaa 8299606  T
Q  287 acaaacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacct 386  Q
     || ||||||  ||| || | ||| ||||| || || |   ||||||| |||  ||        ||||| || ||| |||  || |||||||||||||||    
T  8299605 gcacacagaactccaaccaacccacgaaatctttcttttatcctcacatcccccccaaaaaaatttattaaacaaagattcaatagaagagattatacct 8299506  T
Q  387 gatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgcc 486  Q
    || ||||||||||| ||||||||  |||||||| | |  ||| ||| || | | ||||| ||| | || |||||||| || |||||| | | | ||||||    
T  8299505 gacggagctttgaaaaaggaaagtgcatagacaggaatcgcagttaagacaaatttgagcagatcaag-cgaccaccaaaggaaaggtacctactatgcc 8299407  T
Q  487 aaccagacaatctaga 502  Q
    ||||||||||||||||    
T  8299406 aaccagacaatctaga 8299391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 5e-29
Query Start/End: Original strand, 109 - 419
Target Start/End: Original strand, 10780740 - 10781050
Alignment:
Q  109 aagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacg 208  Q
    |||| ||||| ||||||||||||||||  |  |||||| |||| ||||||||||||| ||||||||||| ||||||| |  | |  || |||||||  ||    
T  10780740 aagagcaactccggcccccatcctccaaaccaccatccgccactccatacctagccaacaacaccctactccacaaacctcccctatcaactaacagccg 10780839  T
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatc 308  Q
    |||||||||||| || |||| |||||| |||||||| ||||||||| | || |||||||||||||||||| | |||||||| | ||||  ||| || | |    
T  10780840 ccaacaccatttccccaacaaagcaatgttaaactctctcaacctcctcacacccaaccctccatactccctcctcaaacacaaagaactccaaccaacc 10780939  T
Q  309 caagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaa 408  Q
    |||||||| || || |   ||||||| |||  ||        ||||| || ||| |||  || ||||||||||||||||| ||||||||||| |||||||    
T  10780940 caagaaatctttcttttatcctcacaacccccccaaaaaaatttatttaacaaagattcaatagaagagattatacctgacggagctttgaaaaaggaaa 10781039  T
Q  409 gaccatagaca 419  Q
    |  ||||||||    
T  10781040 gtgcatagaca 10781050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 3e-27
Query Start/End: Original strand, 73 - 419
Target Start/End: Complemental strand, 22094887 - 22094540
Alignment:
Q  73 ccccatcccggattctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacac 172  Q
    |||||||||  |||||| | | ||||| ||||||  ||||||||||||||||||||||||||| || ||||    || | ||||| | ||| || || ||    
T  22094887 ccccatccctaattctccccacctcccgccaccacgaagaacaacttcggcccccatcctccaacctcccacaaacctcgccataacgagcgactaaaac 22094788  T
Q  173 cctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctcca 272  Q
     ||| |||| ||| || | |  ||||||||||  | ||||||||| || ||||  | |||||||||||||||| |||||    ||||||| |||||||||    
T  22094787 tctataccaaaaaccacccctatccactaacatcctccaacaccacttccctagtaaagcaatattaaactccttcaactgtctaacccctaaccctcca 22094688  T
Q  273 tactcctttctcaaacaaacagaagaccatcctatccaagaaattttcctatgtccctcacaccc-cttccnnnnnnnnttattcaataaatattttatg 371  Q
     ||||||||   | ||||||||||||||| ||||||||||| |||||||| ||| |||||| ||| |  |         ||||| |||||| |||  |||    
T  22094687 aactccttttggagacaaacagaagaccagcctatccaagatattttcctgtgttcctcacccccaccccaaaaaaaaattattaaataaagattcaatg 22094588  T
Q  372 gaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    | ||||||||||||||| ||||||||||||||||||||| ||||||||    
T  22094587 gcagagattatacctgacggagctttgaagaaggaaagagcatagaca 22094540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 3e-27
Query Start/End: Original strand, 87 - 254
Target Start/End: Original strand, 31642028 - 31642195
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||||||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||| |||||||||| ||||||||||||||| | | |||||||     
T  31642028 ctcactatctcccgccaccatgaagaacaactccggcccccatcctccaaacctccatccgccacaccatatctagccaccaacacctttctccacaaag 31642127  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctc 254  Q
    | ||   ||||| |||||| ||||||||||||||| | |||| ||| | ||||||||| |||||||||    
T  31642128 cttccttctccaataacaaccgccaacaccatttatccaacaaagctaaattaaactctctcaacctc 31642195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 4e-26
Query Start/End: Original strand, 209 - 426
Target Start/End: Original strand, 38358106 - 38358323
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatc 308  Q
    |||||||||||||||||  | |||||||||||||||| |||| ||| |||||||||| |||||| |||||||| |  |||| | ||||  ||| ||||||    
T  38358106 ccaacaccatttacctagtaaagcaatattaaactccttcaatctcctaacccccaaacctccaaactcctttttagaacataaagaatcccaacctatc 38358205  T
Q  309 caagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaa 408  Q
    |||| |||||| |||    |||||| |||   ||        |||||||||||| |||  ||||||||||||||||||| ||||||||||||||| ||||    
T  38358206 caagtaatttttctacaatcctcactcccaccccagaaaaaattattcaataaagattcaatggaagagattatacctgttggagctttgaagaaagaaa 38358305  T
Q  409 gaccatagacatgcagag 426  Q
    || |||||||| ||||||    
T  38358306 gagcatagacaggcagag 38358323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 140 - 502
Target Start/End: Complemental strand, 25857009 - 25856647
Alignment:
Q  140 cccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatatta 239  Q
    |||||||||||| ||||||||||||| ||||||||||| ||||||| |  | |  || |||||||  | | |||||||||| || |||| |||||| |||    
T  25857009 cccatcctccacgccatacctagccaacaacaccctactccacaaacctcccctatcaactaacagcctctaacaccatttccccaacaaagcaatgtta 25856910  T
Q  240 aactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatccaagaaattttcctatgtccctcacacccct 339  Q
    ||||| | ||||||| |||| |||||||||||||||||| | ||||| || ||||||  ||| || | ||| ||||| || || |   ||||||| |||     
T  25856909 aactctcgcaacctcctaacacccaaccctccatactccctcctcaagcacacagaactccacccaacccacgaaatctttcttttatcctcacatcccc 25856810  T
Q  340 tccnnnnnnnnttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgataga 439  Q
     ||        ||||| || ||| |||| ||  |||||||||||||||| ||||||||||| ||||||||  |||||||| | |  ||| ||| || |||    
T  25856809 cccaaaaaaatttattaaacaaagatttaatataagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggaatcgcagttaagacaga 25856710  T
Q  440 cttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgccaaccagacaatctaga 502  Q
     ||||| ||||  |  |||||||| || |||||| | | | ||||||||||||||||||||||    
T  25856709 tttgagcagaatcaagcgaccaccaaaggaaaggtacctactatgccaaccagacaatctaga 25856647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 101 - 278
Target Start/End: Original strand, 41590627 - 41590804
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccact 200  Q
    ||||||| ||||||  || ||||||||| || ||| || |||||||||| |||||||||| ||||||||||||||| |||| |||  |   | ||| ||     
T  41590627 ccaccaagaagaacctctccggcccccaaccgccaacctcccatcctcctcaccatacctcgccaccaacaccctataccataaagtactcctctcaacc 41590726  T
Q  201 aacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcc 278  Q
    |||||||||||||||||||| ||||| |  |||| ||||||||||| |||||||   |||||||| ||||||||||||    
T  41590727 aacaaacgccaacaccatttgcctaataacgcaacattaaactcccgcaacctccgcacccccaaacctccatactcc 41590804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 140 - 289
Target Start/End: Complemental strand, 27165535 - 27165386
Alignment:
Q  140 cccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatatta 239  Q
    ||||||||||||| |||||||||||||||||||| ||| | ||||  | || |  || |||||||| |||||||||||||| || | ||  ||||| |||    
T  27165535 cccatcctccacaacatacctagccaccaacaccttacgcaacaacccttccctatctactaacaaccgccaacaccatttccccagcaatgcaatgtta 27165436  T
Q  240 aactccctcaacctcataacccccaaccctccatactcctttctcaaaca 289  Q
    ||||  ||||||||| |||| |||| ||||||||||||||| ||||||||    
T  27165435 aactttctcaacctcctaacacccatccctccatactccttcctcaaaca 27165386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 101 - 278
Target Start/End: Complemental strand, 4297918 - 4297741
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccact 200  Q
    ||||||| ||||||  || ||| ||||| || ||| || |||||||||| |||||||||| ||||||||||||||| |||| |||  |   | ||| ||     
T  4297918 ccaccaagaagaacctctccgggccccaaccgccaacctcccatcctcctcaccatacctcgccaccaacaccctataccataaactactcctctcaacc 4297819  T
Q  201 aacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcc 278  Q
    |||||| ||||||||||||| ||||| |  |||| ||||||||||| |||||||   |||||||| ||||||||||||    
T  4297818 aacaaatgccaacaccatttgcctaataacgcaacattaaactcccgcaacctccgcacccccaaacctccatactcc 4297741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 351 - 419
Target Start/End: Original strand, 19506779 - 19506847
Alignment:
Q  351 ttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||||| ||| |||  ||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  19506779 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagaca 19506847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 351 - 426
Target Start/End: Complemental strand, 35122047 - 35121972
Alignment:
Q  351 ttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    |||||||| ||| |||  |||||||||||||||||||| |||||||| |||||||||||| |||||||| ||||||    
T  35122047 ttattcaacaaagattcaatggaagagattatacctgaaggagctttaaagaaggaaagagcatagacaggcagag 35121972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 419
Target Start/End: Complemental strand, 26261790 - 26261609
Alignment:
Q  237 ttaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatccaagaaattttcctatgtccctcacacc 336  Q
    ||||||||||||| |  | | |||||||||| ||||||||| ||||| ||||||||||    ||| || ||||||||||||||||||||  |||||| ||    
T  26261790 ttaaactccctcatctgccttacccccaaccatccatactcttttcttaaacaaacagttttccaaccaatccaagaaattttcctatgatcctcactcc 26261691  T
Q  337 ccttccnnnnnnnnttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |   ||        |||||||| | | |||  || ||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  26261690 cac-cccaaaaaaattattcaaaataaattcaatagaagagattatacctgaaggagctttgaagaaggaaagagcatagaca 26261609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 369 - 426
Target Start/End: Complemental strand, 20208061 - 20208004
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    |||||||||||||||| ||||||||||||||||||||||||  |||||||| ||||||    
T  20208061 atggaagagattatacatgatggagctttgaagaaggaaagcgcatagacaggcagag 20208004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 369 - 426
Target Start/End: Complemental strand, 30509364 - 30509307
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||||| ||||||    
T  30509364 atggaagagattatacctgttggagctttaaagaaggaaagagcatagacaggcagag 30509307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 369 - 426
Target Start/End: Complemental strand, 30549707 - 30549650
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||||| ||||||    
T  30549707 atggaagagattatacctgttggagctttaaagaaggaaagagcatagacaggcagag 30549650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 416
Target Start/End: Original strand, 6885715 - 6885759
Alignment:
Q  372 gaagagattatacctgatggagctttgaagaaggaaagaccatag 416  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  6885715 gaagagattatacctgatggagctttgaagaaggaaagagcatag 6885759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 369 - 424
Target Start/End: Original strand, 6050039 - 6050094
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcag 424  Q
    |||||||| ||||||||||||||||||||||||||||||||  |||||||| ||||    
T  6050039 atggaagatattatacctgatggagctttgaagaaggaaagcgcatagacaggcag 6050094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 281
Target Start/End: Complemental strand, 35122221 - 35122135
Alignment:
Q  195 tccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactccttt 281  Q
    ||||||||||  | |||||||||||| ||||  |  |||| |||||||| |||||||||| ||||||||||||||||| ||||||||    
T  35122221 tccactaacatcctccaacaccatttccctagtaatgcaacattaaacttcctcaacctcctaacccccaaccctccagactccttt 35122135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 103 - 280
Target Start/End: Original strand, 380434 - 380611
Alignment:
Q  103 accaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaa 202  Q
    ||||| |||||| ||| ||||||||| |||||| || |||  ||||| |||||||||  ||  ||| ||||||| |||| ||| |||| |  ||||| ||    
T  380434 accaagaagaaccactccggcccccaacctccaacctccctgcctcctcaccataccgcgcttccagcaccctataccagaaaccatctctatccaccaa 380533  T
Q  203 caaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctt 280  Q
    ||  |||||||||||||| ||||  |   || |||||||||||||||||  | | |||||||| ||||||||||||||    
T  380534 catccgccaacaccatttgcctagtaagacactattaaactccctcaactgcctgacccccaaacctccatactcctt 380611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 381 - 426
Target Start/End: Original strand, 380712 - 380757
Alignment:
Q  381 atacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||    
T  380712 atacctgatgaagctttgaagaaggaaagagcatagacatgcagag 380757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 120 - 249
Target Start/End: Original strand, 476763 - 476892
Alignment:
Q  120 cggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatt 219  Q
    ||||||||  |||||| || |||  ||||| ||||||| || || |||| ||||||| |||| ||| |||| |  || || ||||  |||||||||||||    
T  476763 cggccccctacctccaacctccctgcctcctcaccatatctcgctaccagcaccctataccaaaaaccatctctatctaccaacattcgccaacaccatt 476862  T
Q  220 tacctaacagagcaatattaaactccctca 249  Q
    ||||||||| |||| |||||||||||||||    
T  476863 tacctaacaaagcactattaaactccctca 476892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 198 - 323
Target Start/End: Complemental strand, 30509559 - 30509434
Alignment:
Q  198 actaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaag 297  Q
    |||||||| | |||||||||||| |||| || ||| | |||||| ||| ||||| || ||||||||||||||||  |||||||| |  ||||||||| |     
T  30509559 actaacaacctccaacaccatttccctagcaaagctacattaaattccttcaacttcctaacccccaaccctcctaactcctttttagaacaaacagtat 30509460  T
Q  298 accatcctatccaagaaattttccta 323  Q
     |||  ||||||||| ||||||||||    
T  30509459 tccaatctatccaagtaattttccta 30509434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 198 - 323
Target Start/End: Complemental strand, 30549899 - 30549774
Alignment:
Q  198 actaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaag 297  Q
    |||||||| | |||||||||||| |||| || ||| | |||||| ||| ||||| || ||||||||||||||||  |||||||| |  ||||||||| |     
T  30549899 actaacaacctccaacaccatttccctagcaaagctacattaaattccttcaacttcctaacccccaaccctcctaactcctttttagaacaaacagtat 30549800  T
Q  298 accatcctatccaagaaattttccta 323  Q
     |||  ||||||||| ||||||||||    
T  30549799 tccaatctatccaagtaattttccta 30549774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 27165573 - 27165525
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctcca 135  Q
    |||| |||||||| ||||||| |||||||||||||||||||||||||||    
T  27165573 ctcattatctccctccaccaagaagaacaacttcggcccccatcctcca 27165525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 351 - 426
Target Start/End: Original strand, 588288 - 588363
Alignment:
Q  351 ttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    |||||||||| | |||  |||||||||||||||| | ||||||||||||||||  ||||| |||||||| ||||||    
T  588288 ttattcaatagagattcaatggaagagattatacataatggagctttgaagaaacaaagagcatagacaggcagag 588363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 325
Target Start/End: Complemental strand, 10486423 - 10486304
Alignment:
Q  207 cgccaacaccatttacctaa-cagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaagaccatcct 305  Q
    |||||||||||||| ||||| || |||| ||||||||||| ||||| |  | |||||||| ||||||||||||||| |  |||||| ||    |||||||    
T  10486423 cgccaacaccatttccctaaacaaagcactattaaactccttcaactttctcacccccaaacctccatactcctttttggaacaaatagttttccatcct 10486324  T
Q  306 atccaagaaattttcctatg 325  Q
    ||||||  ||||||||||||    
T  10486323 atccaactaattttcctatg 10486304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 369 - 508
Target Start/End: Original strand, 33170457 - 33170596
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaag 468  Q
    |||||| ||||||||||||| ||||||||||| ||||||||| |||||||| | || ||| | | || | | ||||| || |  |  ||  |||| ||||    
T  33170457 atggaatagattatacctgacggagctttgaaaaaggaaagagcatagacaggtagtgcagtcaggacaaatttgagaaggatcaaccggtcaccaaaag 33170556  T
Q  469 aaaggaatcaaatatgccaaccagacaatctagatttaat 508  Q
    ||||||| | | ||||||||||||||||||||| ||||||    
T  33170557 aaaggaaccgactatgccaaccagacaatctagctttaat 33170596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 36256309 - 36256392
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaa 184  Q
    ||||||| |||||| ||| |||||||||||||||| || |||||||   |||||||| ||| | |||||||||||| |||||||    
T  36256309 ccaccaaaaagaaccactccggcccccatcctccaacctcccatccctaacaccatatctaacaaccaacaccctataccacaa 36256392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 165
Target Start/End: Original strand, 12825716 - 12825794
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagcca 165  Q
    ||||| ||||||| ||||||  ||||||||||  | |||||||||||||  |  |||||||||||||||||||||||||    
T  12825716 ctcacaatctccctccaccacgaagaacaactctgacccccatcctccaaactgccatcctccacaccatacctagcca 12825794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 294
Target Start/End: Complemental strand, 26262377 - 26262292
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaac-ctcataacccccaaccctccatactcctttctcaaacaaacag 294  Q
    |||||||||||| ||||||| |||| ||||||||||||||| | ||| ||| || ||||||| |||| |||||||| ||||||||||    
T  26262377 ccaacaccattttcctaacaaagcagtattaaactccctcatctctcttaa-cctcaacccttcatattcctttcttaaacaaacag 26262292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 419
Target Start/End: Original strand, 42260081 - 42260131
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||| |||||||| |||||||||||||||||||||||||| | ||||||    
T  42260081 atggaaaagattatatctgatggagctttgaagaaggaaagagcgtagaca 42260131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 373 - 426
Target Start/End: Original strand, 22438021 - 22438074
Alignment:
Q  373 aagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    |||||||||||||||| |||||| |||||||||||| | |||||||||| ||||    
T  22438021 aagagattatacctgagggagctatgaagaaggaaaaagcatagacatgtagag 22438074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 21084682 - 21084730
Alignment:
Q  371 ggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||| ||||||||||| ||||| ||||||||||||||| ||||||||    
T  21084682 ggaagaaattatacctgacggagccttgaagaaggaaagagcatagaca 21084730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 29572209 - 29572154
Alignment:
Q  371 ggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    |||||||||||||| |||  |||||||||||||||||||  |||||||| ||||||    
T  29572209 ggaagagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagag 29572154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 29573586 - 29573531
Alignment:
Q  371 ggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    |||||||||||||| |||  |||||||||||||||||||  |||||||| ||||||    
T  29573586 ggaagagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagag 29573531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 29574963 - 29574908
Alignment:
Q  371 ggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    |||||||||||||| |||  |||||||||||||||||||  |||||||| ||||||    
T  29574963 ggaagagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagag 29574908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 29576340 - 29576285
Alignment:
Q  371 ggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    |||||||||||||| |||  |||||||||||||||||||  |||||||| ||||||    
T  29576340 ggaagagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagag 29576285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 29577717 - 29577662
Alignment:
Q  371 ggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    |||||||||||||| |||  |||||||||||||||||||  |||||||| ||||||    
T  29577717 ggaagagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagag 29577662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 29579094 - 29579039
Alignment:
Q  371 ggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    |||||||||||||| |||  |||||||||||||||||||  |||||||| ||||||    
T  29579094 ggaagagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagag 29579039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 34481585 - 34481672
Alignment:
Q  207 cgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacag 294  Q
    |||||||||||||| ||||||| ||| || ||||||||| |||   || | |||||||| || |||||||||||| | ||||||||||    
T  34481585 cgccaacaccatttccctaacaaagctatgttaaactccttcactttcctcacccccaaaccaccatactccttttttaaacaaacag 34481672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 419
Target Start/End: Original strand, 36256573 - 36256624
Alignment:
Q  368 tatggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||||||||||  ||||| |||||| ||||||||||||||| ||||||||    
T  36256573 tatggaagagattgcacctgttggagccttgaagaaggaaagagcatagaca 36256624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 181
Target Start/End: Complemental strand, 15862292 - 15862206
Alignment:
Q  95 ctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacacca 181  Q
    ||||| ||||||| | |||||||| |  |||||| |||||| ||||||| ||||  ||||||||||||| | |||||||||| ||||    
T  15862292 ctccctccaccaatacgaacaactccatcccccaacctccaaccgcccagcctcttcaccatacctagcaatcaacaccctatacca 15862206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 291
Target Start/End: Original strand, 41925734 - 41925796
Alignment:
Q  229 gagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaa 291  Q
    |||||||||||||||||||||    | ||| ||| || |||||||||||||||||||||||||    
T  41925734 gagcaatattaaactccctcattggcctaatcccaaaacctccatactcctttctcaaacaaa 41925796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 181
Target Start/End: Complemental strand, 42039320 - 42039234
Alignment:
Q  95 ctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacacca 181  Q
    ||||| ||||||| || ||  ||| |||||||||||||||| ||||||| || || |||||||  | ||||||||||||||| ||||    
T  42039320 ctccctccaccaagaaaaagcactccggcccccatcctccaaccgcccaaccacctcaccatatttcgccaccaacaccctatacca 42039234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 324
Target Start/End: Original strand, 10460794 - 10460922
Alignment:
Q  195 tccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacag 294  Q
    ||||||||||  |||||||||||||| |||||||| |  |  |||||||| |  |||||| |||||||||| ||||||| |||||||   | ||||| ||    
T  10460794 tccactaacatccgccaacaccattt-cctaacagtgacaagttaaactctcctaacctcctaacccccaaacctccatcctcctttggaacacaaatag 10460892  T
Q  295 aagaccatcctatccaagaaattttcctat 324  Q
    ||  ||||  |||||||| |||||||||||    
T  10460893 aatcccattttatccaagcaattttcctat 10460922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 289
Target Start/End: Complemental strand, 26263487 - 26263407
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctca-taacccccaaccctccatactcctttctcaaaca 289  Q
    |||||||||||| ||||||| |||| |||||||||||||| | |||| | |||||||||||| |||| ||| |||| |||||    
T  26263487 ccaacaccattttcctaacaaagcagtattaaactccctc-atctcacttacccccaacccttcatattccgttcttaaaca 26263407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 286
Target Start/End: Original strand, 38184033 - 38184106
Alignment:
Q  213 caccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaa 286  Q
    ||||||||||| || ||||||| |||||||||| |||||||  |||| ||||| ||||| | |||||| |||||    
T  38184033 caccatttacccaagagagcaagattaaactccttcaaccttctaacacccaaacctccctcctccttactcaa 38184106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 286
Target Start/End: Complemental strand, 38214324 - 38214251
Alignment:
Q  213 caccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaa 286  Q
    ||||||||||| || ||||||| |||||||||| |||||||  |||| ||||| ||||| | |||||| |||||    
T  38214324 caccatttacccaagagagcaagattaaactccttcaaccttctaacacccaaacctccctcctccttactcaa 38214251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 3e-58; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 3e-58
Query Start/End: Original strand, 87 - 508
Target Start/End: Original strand, 7924903 - 7925324
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||||||||||||||||||||||| |||||| | | |||||||     
T  7924903 ctcacaatctccctccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaag 7925002  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaa 286  Q
    |||| | ||||| |||||| | ||||||||||||||| |||| |||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||     
T  7925003 catccctctccaataacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatactccttcctcat 7925102  T
Q  287 acaaacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttcc-nnnnnnnnttattcaataaatattttatggaagagattatacc 385  Q
    ||  | ||||  ||| |  | |||||| ||||| || | | |||||| ||||| ||         ||||| || ||| |||  |||||||||||||||||    
T  7925103 actcaaagaatcccacctaacccaagatatttttcttttttcctcac-cccctccctagaaaaatttattaaacaaagattcaatggaagagattatacc 7925201  T
Q  386 tgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgc 485  Q
    ||  ||||||||||||||||||||  |||||||| | |||||| | | || |||||| || ||||  | ||||||||||||||| ||||| | | |   |    
T  7925202 tgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaagaatcaaacgaccaccgaaagataggaaccgacttgnc 7925301  T
Q  486 caaccagacaatctagatttaat 508  Q
    |||||||||||||||||||||||    
T  7925302 caaccagacaatctagatttaat 7925324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 107; E-Value: 6e-53
Query Start/End: Original strand, 231 - 509
Target Start/End: Complemental strand, 14345398 - 14345121
Alignment:
Q  231 gcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatccaagaaattttcctatgtccct 330  Q
    |||| |||||||| |||||||||| | |||| ||| | | ||||||||||||||||||||| |||||| |||  ||||||||||||||||||||||||||    
T  14345398 gcaacattaaacttcctcaacctcctcaccctcaaactttcatactcctttctcaaacaaatagaagaacatgatatccaagaaattttcctatgtccct 14345299  T
Q  331 cacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagagcaat 430  Q
    |||| |||  ||        ||||||| |||| |||||||||||||||||||| |||||||||  ||||||||||||||| ||||||||  ||||| | |    
T  14345298 cacaacccc-ccaaaaaaatttattcagtaaagattttatggaagagattatatctgatggagtcttgaagaaggaaagagcatagacagacagagtagt 14345200  T
Q  431 tatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgccaaccagacaatctagatttaatg 509  Q
    || || |||||||||||||   ||||| ||||||||||||| ||| | | |||| ||||||||||||||||||||||||    
T  14345199 taggacagacttgaggagagtaagacgtccaccgaaagaaatgaagcgactatgacaaccagacaatctagatttaatg 14345121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 104; E-Value: 4e-51
Query Start/End: Original strand, 87 - 509
Target Start/End: Original strand, 9923118 - 9923540
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||||||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||| |||||||||||||||||||||||||| | | |||||||     
T  9923118 ctcactatctccctccaccatgaagaacaactccggcccccatcctccaaacctccatccgccacaccatacctagccaccaacacctttctccacaaag 9923217  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaa 286  Q
    | ||   ||||| |||||| ||||||||||||||| | |||| ||| | ||||||||| ||||||||| ||||||||||||||||||||||||| |||||    
T  9923218 cttccttctccaataacaaccgccaacaccatttatccaacaaagctaaattaaactctctcaacctcgtaacccccaaccctccatactccttcctcaa 9923317  T
Q  287 acaaacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttcc-nnnnnnnnttattcaataaatattttatggaagagattatacc 385  Q
    ||  | || |  ||| |  ||||| |||||||| || |   |||||| ||||| ||         ||||| || ||| |||  |||||||||||||||||    
T  9923318 actcaaagtatcccacctaatccatgaaatttttcttttatcctcac-cccctcccgaaaaaaatttattaaacaaagattcaatggaagagattatacc 9923416  T
Q  386 tgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgc 485  Q
    ||| ||||||||||| ||||||||   ||||||| | |||||| | | ||  ||||| || ||||| | ||||||||| ||||||||||||| | | |||    
T  9923417 tgacggagctttgaaaaaggaaagtgtatagacaggtagagcagtcaagacggacttaagaagaaccaaacgaccaccaaaagaaaggaatcgactttgc 9923516  T
Q  486 caaccagacaatctagatttaatg 509  Q
    |||||||||||||||  |||||||    
T  9923517 caaccagacaatctatttttaatg 9923540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 103; E-Value: 2e-50
Query Start/End: Original strand, 87 - 285
Target Start/End: Original strand, 8300320 - 8300518
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||||||||||||||||||||||| |||||| | | |||||||     
T  8300320 ctcacgatctccctccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaag 8300419  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctca 285  Q
    |||| | ||||| |||||| | ||||||||||||||| |||| |||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  8300420 catccctctccaataacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatactccttcctca 8300518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 87 - 508
Target Start/End: Complemental strand, 41664991 - 41664570
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||||||||||  ||||||  |||||||||| ||||||||||||||||  |  |||||| ||||||||||||||||||| |||||| | | |||||||     
T  41664991 ctcactatctccatccaccacgaagaacaactccggcccccatcctccaaacctccatccgccacaccatacctagccactaacaccttcctccacaaag 41664892  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaa 286  Q
    | || | ||||| |||||| ||||||||||||||||| |||| |||||| |||||||| ||||||||| ||||||||||||||||||||||||| ||||     
T  41664891 cctccctctccaataacaaccgccaacaccatttacccaacaaagcaatgttaaactctctcaacctcgtaacccccaaccctccatactccttcctcat 41664792  T
Q  287 acaaacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacct 386  Q
    ||  | || |  ||| |  | |||||| ||||| || | | |||||| |||   ||        ||||| || ||| |||  |||||| |||||||||||    
T  41664791 actcaaagtatcccacctaacccaagatatttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaatagattatacct 41664692  T
Q  387 gatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgcc 486  Q
    || ||||||||||| ||||||||  | |||||| |  ||||| | | ||  ||||| || ||||  | ||||||||||||||| ||||| | | | ||||    
T  41664691 gacggagctttgaaaaaggaaagtgcgtagacaggtggagcagtcaggacggactttagtagaatcaaacgaccaccgaaagataggaaccgactttgcc 41664592  T
Q  487 aaccagacaatctagatttaat 508  Q
    ||||||||||||||||||||||    
T  41664591 aaccagacaatctagatttaat 41664570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 87 - 285
Target Start/End: Complemental strand, 172662 - 172464
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||||||||||||||||||||||| |||||| | | ||||||      
T  172662 ctcacgatctccctccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaacg 172563  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctca 285  Q
    |||| | ||||| |||||| | ||| ||||||||||| |||| |||||| |||||||||||||||||| ||| ||||||||||||||||||||| ||||    
T  172562 catccctctccaataacaacctccagcaccatttacccaacaaagcaatgttaaactccctcaacctcttaaaccccaaccctccatactccttcctca 172464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 90 - 508
Target Start/End: Complemental strand, 13879107 - 13878689
Alignment:
Q  90 actatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcat 189  Q
    |||||||||| ||||||  ||||||||||  |||||||||||||||  |  |||||| |||||||||||||||||||||||||||||| ||| ||  | |    
T  13879107 actatctccctccaccacgaagaacaactctggcccccatcctccaaaccaccatccgccacaccatacctagccaccaacaccctacgccataacccct 13879008  T
Q  190 caccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaaca 289  Q
    | |  || |||||||| |||||||||||||| |||| || |||||| |||||||  ||||| |||  ||| |||||||| ||||||||| | ||||||||    
T  13879007 ctctatcaactaacaaccgccaacaccatttccctagcaaagcaatgttaaacttgctcaatctccgaacacccaaccccccatactccctcctcaaaca 13878908  T
Q  290 aacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacctgat 389  Q
     | ||||  ||| || | ||| || ||||| || | | ||||||| |||  |         ||||| || ||| |||  ||||||||||||||||||||     
T  13878907 caaagaatgccaaccaacccacgatatttttcttttttcctcacaacccccctaaaaaaatttatttaacaaagattcaatggaagagattatacctgac 13878808  T
Q  390 ggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgccaac 489  Q
    ||||||||||| ||||||||  |||||||| | || ||| | | ||   | ||||| ||||  ||||||||||| ||||||||||| | | |||||||||    
T  13878807 ggagctttgaaaaaggaaagtgcatagacaggaagtgcagtcaggacgaatttgagaagaattagacgaccaccaaaagaaaggaaccgactatgccaac 13878708  T
Q  490 cagacaatctagatttaat 508  Q
    ||||||||| || ||||||    
T  13878707 cagacaatcgagttttaat 13878689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 87 - 296
Target Start/End: Original strand, 20824816 - 20825025
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  ||||||||||| ||||||||||||| ||||||||||| |||||||     
T  20824816 ctcacaatctccctccaccacaaagaacaactccggcccccatcctccaaaccaccatcctccacgccatacctagccaacaacaccctactccacaaac 20824915  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaa 286  Q
    |  | |  || |||||||  | |||||||||||| || |||| |||||| |||||||| ||||||||| |||| |||||||||||||||||| | |||||    
T  20824916 ctcccctatcaactaacagcctccaacaccatttccccaacaaagcaatgttaaactctctcaacctcctaacacccaaccctccatactccctcctcaa 20825015  T
Q  287 acaaacagaa 296  Q
     || ||||||    
T  20825016 gcacacagaa 20825025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 90 - 289
Target Start/End: Original strand, 25090907 - 25091105
Alignment:
Q  90 actatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcat 189  Q
    |||||||||| ||||||  ||||||| || ||||||||||||||||  |  |||||| ||||||||||| |||||||||||||||||| ||||||  | |    
T  25090907 actatctccctccaccacgaagaacagctccggcccccatcctccaaaccaccatccgccacaccatacatagccaccaacaccctacgccacaacccct 25091006  T
Q  190 caccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaaca 289  Q
    | |  || |||||||| ||| |||||||||| ||||||| |||||| |||||||| ||||| ||| |||| ||||| || ||||||||| | ||||||||    
T  25091007 ctctatcaactaacaaccgctaacaccatttccctaacaaagcaatgttaaactctctcaatctcctaacacccaaacc-ccatactccctcctcaaaca 25091105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 7e-25
Query Start/End: Original strand, 157 - 508
Target Start/End: Original strand, 32267141 - 32267492
Alignment:
Q  157 acctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcat 256  Q
    |||||||||| |||||| | | ||||||| | || | ||||| |||||| ||||||||||||||||| |||| ||| || |||||||| ||||| ||| |    
T  32267141 acctagccactaacacctttctccacaaagcttccctctccaataacaaccgccaacaccatttacccaacaaagctatgttaaactctctcaatctcgt 32267240  T
Q  257 aacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattc 356  Q
    |||||||||||||||||||||||| | |||||  | |  |  ||| |  | |||||| ||||| || | | | |||| |||   ||        |||||     
T  32267241 aacccccaaccctccatactccttccgcaaactcaaaatatcccacctaacccaagatatttttcttttttcttcaccccctccccaaaaaaaattatta 32267340  T
Q  357 aataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagac 456  Q
    || ||| |||  ||||||||||||||||||||   ||||||||| ||||||||  |||||||| | |||||| | ||||  |||||  | ||||  | ||    
T  32267341 aacaaagattcaatggaagagattatacctgacaaagctttgaaaaaggaaagtgcatagacaggtagagcagtcatgacggacttttgaagaatcaaac 32267440  T
Q  457 gaccaccgaaagaaaggaatcaaatatgccaaccagacaatctagatttaat 508  Q
    ||||||||||||||||||| | | | ||||||||||||||||||||||||||    
T  32267441 gaccaccgaaagaaaggaaccgactttgccaaccagacaatctagatttaat 32267492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 101 - 278
Target Start/End: Original strand, 36492912 - 36493089
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccact 200  Q
    ||||||| ||||||  || ||||||||| || ||| || |||||||||| |||||||||| ||||||||||||||| |||| |||  |   | ||| ||     
T  36492912 ccaccaagaagaacctctccggcccccaaccgccaacctcccatcctcctcaccatacctcgccaccaacaccctataccataaactactcctctcaacc 36493011  T
Q  201 aacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcc 278  Q
    |||||||||||||||||||| ||||| |  |||| ||||||||||| |||||||   |||||||| ||||||||||||    
T  36493012 aacaaacgccaacaccatttgcctaataacgcaacattaaactcccgcaacctccgcacccccaaacctccatactcc 36493089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 90 - 289
Target Start/End: Original strand, 17700000 - 17700199
Alignment:
Q  90 actatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcat 189  Q
    |||||||||| |||||   |||| ||||| ||||||||||||||||  |  |||||   ||| |||||||||||||  |||||||||| ||||||| |      
T  17700000 actatctccctccaccgcgaagagcaactccggcccccatcctccaaaccaccatctgtcactccatacctagccaagaacaccctactccacaaacctc 17700099  T
Q  190 caccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaaca 289  Q
    | |  || |||||||  |||||||||||||| || |||| |||||| |||||||| ||||||||| | || |||||||||||||||||| | ||||||||    
T  17700100 ccctatcaactaacagccgccaacaccatttccccaacaaagcaatgttaaactctctcaacctcctcacacccaaccctccatactccctcctcaaaca 17700199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 70 - 169
Target Start/End: Original strand, 38046858 - 38046957
Alignment:
Q  70 caaccccatcccggattctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaa 169  Q
    |||| ||| |||| ||||| |||||||||| ||| ||  ||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||    
T  38046858 caacaccaccccgaattctaactatctccctccatcacgaagaacaacttcggcccccatcctccaacctcccatcctccacaccatacctagcaaccaa 38046957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 198 - 419
Target Start/End: Original strand, 23942715 - 23942936
Alignment:
Q  198 actaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaag 297  Q
    |||||||| | |||||||||||||||||  | ||||| |||||||||| ||||| || | |||||||| ||||||| ||||||| |  |||| |  | |     
T  23942715 actaacaacctccaacaccatttacctagtaaagcaacattaaactccttcaacttcctgacccccaaacctccatgctcctttttagaacacaaggtat 23942814  T
Q  298 accatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacctgatggagcttt 397  Q
     ||| ||||||||||||||||| |||    |||||| |||   ||        |||||||||||| |||  |||||||||||||||| ||||||||||||    
T  23942815 tccaacctatccaagaaatttttctaaaatcctcactcccaccccaaaaaaaattattcaataaagattcaatggaagagattatacatgatggagcttt 23942914  T
Q  398 gaagaaggaaagaccatagaca 419  Q
    ||||||||||||| ||||||||    
T  23942915 gaagaaggaaagagcatagaca 23942936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 140 - 254
Target Start/End: Original strand, 12332418 - 12332532
Alignment:
Q  140 cccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcacc-ctccactaacaaacgccaacaccatttacctaacagagcaatatt 238  Q
    |||||||||| ||||||| || ||||||||||||||| |||| | |  | |||| ||||||||| ||||||||||||||||| |||||||  ||||||||    
T  12332418 cccatcctcctcaccatatctcgccaccaacaccctataccaaagacta-cacctctccactaataaacgccaacaccatttgcctaacaacgcaatatt 12332516  T
Q  239 aaactccctcaacctc 254  Q
    ||||||||||||||||    
T  12332517 aaactccctcaacctc 12332532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 24794385 - 24794456
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctt 280  Q
    |||||||||||||||||||| ||||| ||||||||||||||| ||| ||||||||||||||||| |||||||    
T  24794385 ccaacaccatttacctaacaaagcaaaattaaactccctcaatctcctaacccccaaccctccagactcctt 24794456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 198 - 419
Target Start/End: Original strand, 18187774 - 18187994
Alignment:
Q  198 actaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaag 297  Q
    |||||||| | |||||||||||||||||||| |||| | ||||||||||||     | ||||||||||||||||| |||| ||||  |||||||||        
T  18187774 actaacaatctccaacaccatttacctaacaaagcagtgttaaactccctcgtatgcctaacccccaaccctccagactcttttcctaaacaaacatttt 18187873  T
Q  298 accatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacctgatggagcttt 397  Q
     ||| |  |||||||||||||||||||   ||||||||||   ||        |||||||||||| |||| || ||||||||| ||||||| ||||||||    
T  18187874 -ccaactaatccaagaaattttcctattgtcctcacaccctccccaaaaaaatttattcaataaaaatttaatagaagagattgtacctgacggagcttt 18187972  T
Q  398 gaagaaggaaagaccatagaca 419  Q
    ||||| ||||||| ||||||||    
T  18187973 gaagatggaaagagcatagaca 18187994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 140 - 289
Target Start/End: Original strand, 43271007 - 43271155
Alignment:
Q  140 cccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatatta 239  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||| || |    ||  ||||||| |||||||||||||| || |  || | ||| |||    
T  43271007 cccatccgccacaccatacctagccatcaacaccctacaccacaaaccacccatatcatctaacaaccgccaacaccatttccccagtagggaaatgtta 43271106  T
Q  240 aactccctcaacctcataacccccaaccctccatactcctttctcaaaca 289  Q
    ||||| ||||||||| |||| ||||| |||||||||||| | ||||||||    
T  43271107 aactctctcaacctcctaacacccaa-cctccatactccctcctcaaaca 43271155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 198 - 289
Target Start/End: Complemental strand, 37434471 - 37434380
Alignment:
Q  198 actaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaaca 289  Q
    |||||||  |||||||||||||| || |||| |||||| |||||||| ||||||||| |||| |||||||||||||||||| | ||||||||    
T  37434471 actaacagccgccaacaccattttcccaacaaagcaatgttaaactctctcaacctcctaacacccaaccctccatactccctcctcaaaca 37434380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 209 - 419
Target Start/End: Original strand, 5585328 - 5585538
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatc 308  Q
    |||||||||||||||||  | |||||||||||| ||||| ||| || | ||| |||| |||||||||||||| | ||||||||||  |  ||| | || |    
T  5585328 ccaacaccatttacctagtaaagcaatattaaattcccttaacttcctcacctccaatcctccatactccttacgcaaacaaacaatattccaacgtaac 5585427  T
Q  309 caagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaa 408  Q
    ||||| |||||||||||  |||||| ||||  |         |||||||||| | |||  |||||||||||||||| ||||||||| ||||||||| | |    
T  5585428 caagatattttcctatgatcctcactcccccccaaaaaaaaattattcaatatagattcaatggaagagattatacatgatggagccttgaagaagaaca 5585527  T
Q  409 gaccatagaca 419  Q
    || ||||||||    
T  5585528 gagcatagaca 5585538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 369 - 426
Target Start/End: Original strand, 6901736 - 6901793
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    |||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||    
T  6901736 atggaagagattatacctaatggagctttgaagaaggaaagggcatagacatgcagag 6901793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 369 - 426
Target Start/End: Original strand, 36157953 - 36158010
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||    
T  36157953 atggaagagattatacctgatggagctttgaagaaggaaagcgcatagacaggcagag 36158010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 207 - 419
Target Start/End: Original strand, 7452989 - 7453201
Alignment:
Q  207 cgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaagaccatccta 306  Q
    ||||||||||| |||||||||| |||| ||||||| ||  |||||    | |||||||| ||||||||||||||| |  |||||||||    ||| ||||    
T  7452989 cgccaacaccacttacctaacaaagcactattaaattcattcaactgtctcacccccaaacctccatactccttttttgaacaaacagttttccaaccta 7453088  T
Q  307 tccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacctgatggagctttgaagaagga 406  Q
    |||| |||||||| |||||  ||||||  |||  ||        ||||| |||||| |||  | ||||||||||||||||||||||||||||||||| ||    
T  7453089 tccaggaaatttttctatgatcctcactgcccccccaaaaaaaattattaaataaagattcaagggaagagattatacctgatggagctttgaagaaaga 7453188  T
Q  407 aagaccatagaca 419  Q
    |||  ||||||||    
T  7453189 aagtgcatagaca 7453201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 209 - 281
Target Start/End: Complemental strand, 11393849 - 11393777
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactccttt 281  Q
    ||||||||||||||||||||  |||| ||||||||||||||| | | ||||||||||||||||| ||||||||    
T  11393849 ccaacaccatttacctaacaatgcaaaattaaactccctcaatcacctaacccccaaccctccagactccttt 11393777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 351 - 419
Target Start/End: Original strand, 24794501 - 24794569
Alignment:
Q  351 ttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||||| ||| |||  ||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  24794501 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagaca 24794569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 209 - 281
Target Start/End: Complemental strand, 43249305 - 43249234
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactccttt 281  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||| ||| ||||||||||||| ||||||||    
T  43249305 ccaacaccatttacctaacaaagcaaaattaaactctctcaacctcctaa-ccccaaccctccagactccttt 43249234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 282
Target Start/End: Complemental strand, 37165740 - 37165549
Alignment:
Q  91 ctatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatc 190  Q
    ||||||||| |||||||  ||||  ||| ||||||||| |||||| ||||||||||||| | ||||| || |||||||  |||||| |||||||  |  |    
T  37165740 ctatctccctccaccaagtagaaacactccggcccccaacctccaaccgcccatcctcctcgccatatctcgccaccagtaccctataccacaagcctcc 37165641  T
Q  191 accctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttc 282  Q
     |  ||||||||||  | |||||| || || ||||| |||||||||||||| ||| |||||| | | |||||||| || |||| ||||||||    
T  37165640 tctatccactaacatcctccaacatcactttcctaatagagcaatattaaattccttcaaccgcctcacccccaaacccccattctcctttc 37165549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 319
Target Start/End: Complemental strand, 42177172 - 42176946
Alignment:
Q  90 actatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcat 189  Q
    |||||||||| ||||||  ||||||||||||||||| |||||||||  |  |||||  ||  |   |||||||||||||||||||||| ||||||| |||    
T  42177172 actatctccctccaccacgaagaacaacttcggcccgcatcctccaaaccaccatctgcctga---tacctagccaccaacaccctacgccacaaaccat 42177076  T
Q  190 caccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaaca 289  Q
    | |  || |||||||| || ||||| |||||  | |||| || ||| |||||||| ||||||| | |||| | || ||||||||||||| | |||| |||    
T  42177075 ccctatcaactaacaaccgtcaacatcatttctccaacaaaggaatgttaaactctctcaaccccctaacactcatccctccatactccctcctcataca 42176976  T
Q  290 aacagaagaccatcctatccaagaaatttt 319  Q
     | ||||  ||| || | ||||||||||||    
T  42176975 caaagaactccaaccaacccaagaaatttt 42176946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 351 - 426
Target Start/End: Complemental strand, 43612544 - 43612469
Alignment:
Q  351 ttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    |||||||||||| |||  ||||||||||||||||||||||||||||| ||||| |||||  |||||||||| ||||    
T  43612544 ttattcaataaagattcaatggaagagattatacctgatggagctttcaagaatgaaagggcatagacatgaagag 43612469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 135
Target Start/End: Complemental strand, 43283350 - 43283248
Alignment:
Q  33 gacacacacgacgcaaaccacccatcactcctaccttcaaccccatcccggattctcactatctcccaccaccaacaagaacaacttcggcccccatcct 132  Q
    ||||||||||| |||||||||| ||||   ||| |  ||||| ||||||  |||||||||||||||| |||||||||||||||||| ||||  |||||||    
T  43283350 gacacacacgaagcaaaccacctatcataactaacaccaacctcatcccaaattctcactatctccctccaccaacaagaacaactccggcttccatcct 43283251  T
Q  133 cca 135  Q
    |||    
T  43283250 cca 43283248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 419
Target Start/End: Complemental strand, 11393690 - 11393622
Alignment:
Q  351 ttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||||| ||| |||  ||||||||||||||||||||||||||||| ||||| |||||| ||||||||    
T  11393690 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaatgaaagagcatagaca 11393622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 293
Target Start/End: Complemental strand, 16048417 - 16048333
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaaca 293  Q
    |||||||||||||||||| ||||| || ||||||||||||| |  | ||  |||||||||||||||||||||||  |||||||||    
T  16048417 ccaacaccatttacctaaaagagccatgttaaactccctcatctgcctagtccccaaccctccatactcctttcgtaaacaaaca 16048333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 369 - 508
Target Start/End: Original strand, 8300602 - 8300741
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaag 468  Q
    |||||||||||||||||||  ||||||||||| ||||||||  |||||||| | |||||| | | ||  ||||| || ||||  | ||| |||||||| |    
T  8300602 atggaagagattatacctgccggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaatcaaacggccaccgaagg 8300701  T
Q  469 aaaggaatcaaatatgccaaccagacaatctagatttaat 508  Q
    |||| || | | | |||||||||| |||||||||||||||    
T  8300702 aaagaaaccgactttgccaaccagccaatctagatttaat 8300741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 141 - 280
Target Start/End: Original strand, 8902398 - 8902537
Alignment:
Q  141 ccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaa 240  Q
    ||||||||| ||||||| | |||||| ||||||||| |||||||  || | |  || |||||||  |||||||||||||| ||||| ||||| | |||||    
T  8902398 ccatcctcctcaccataacgagccactaacaccctataccacaagccagctctatcaactaacatccgccaacaccattttcctaagagagccagattaa 8902497  T
Q  241 actccctcaacctcataacccccaaccctccatactcctt 280  Q
    | || |||| |||| |||||||||| ||||| | ||||||    
T  8902498 attctctcatcctcctaacccccaaacctccttcctcctt 8902537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 369 - 419
Target Start/End: Complemental strand, 29721252 - 29721202
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||||||||    
T  29721252 atggaagagattatacctgacggagctttgaaaaaggaaagagcatagaca 29721202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 369 - 419
Target Start/End: Complemental strand, 45255181 - 45255131
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    ||||||||||||||||||||||||||||||||||| |||||  ||||||||    
T  45255181 atggaagagattatacctgatggagctttgaagaatgaaagcgcatagaca 45255131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 4992036 - 4991983
Alignment:
Q  370 tggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgca 423  Q
    |||||||||||||| ||||  |||||||||||||||||||| ||||||||||||    
T  4992036 tggaagagattatatctgacagagctttgaagaaggaaagatcatagacatgca 4991983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 354 - 423
Target Start/End: Original strand, 12135007 - 12135076
Alignment:
Q  354 ttcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgca 423  Q
    ||||||||| |||  ||||||||||||||||| |||| |||||| |||||||||||  ||||||||||||    
T  12135007 ttcaataaagattcaatggaagagattatacccgatgaagctttaaagaaggaaagtgcatagacatgca 12135076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 364 - 421
Target Start/End: Complemental strand, 28992565 - 28992508
Alignment:
Q  364 attttatggaagagattatacctgatggagctttgaagaaggaaagaccatagacatg 421  Q
    |||| |||||||||||||||||||| ||  ||||||||||||||||| ||||||||||    
T  28992565 atttcatggaagagattatacctgacgggactttgaagaaggaaagagcatagacatg 28992508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 369 - 410
Target Start/End: Original strand, 36025320 - 36025361
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaaga 410  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  36025320 atggaagagattatacctgacggagctttgaagaaggaaaga 36025361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 403
Target Start/End: Complemental strand, 43611550 - 43611498
Alignment:
Q  351 ttattcaataaatattttatggaagagattatacctgatggagctttgaagaa 403  Q
    |||||||||||| |||| ||||||||||||||||||||| || ||||||||||    
T  43611550 ttattcaataaagatttaatggaagagattatacctgatagaactttgaagaa 43611498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 184
Target Start/End: Complemental strand, 4310451 - 4310368
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaa 184  Q
    ||||||| |||||| ||| |||||||||||||||| || |||||||   ||| |||| ||||| |||||||||||| |||||||    
T  4310451 ccaccaaaaagaaccactccggcccccatcctccaacctcccatccctaacatcatatctagcaaccaacaccctataccacaa 4310368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 369 - 508
Target Start/End: Original strand, 10530459 - 10530598
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaag 468  Q
    |||||||||||||||||||| ||||||||||| ||||||||  |||| |||   |||||| ||| ||  ||||| || || |  || ||  |||| ||||    
T  10530459 atggaagagattatacctgaaggagctttgaaaaaggaaagtgcataaacagaaagagcagttaggacggactttagaaggattaggcggtcaccaaaag 10530558  T
Q  469 aaaggaatcaaatatgccaaccagacaatctagatttaat 508  Q
    ||| ||| | | |||||||| |||||||||||||||||||    
T  10530559 aaatgaaccgactatgccaagcagacaatctagatttaat 10530598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 377 - 419
Target Start/End: Original strand, 6245891 - 6245933
Alignment:
Q  377 gattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||||||||| ||||||||||||||||||||| ||||||||    
T  6245891 gattatacctgacggagctttgaagaaggaaagagcatagaca 6245933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 211 - 281
Target Start/End: Original strand, 10530306 - 10530376
Alignment:
Q  211 aacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactccttt 281  Q
    |||||||||| |||||||| | |||||||||||| ||||||||  |||| | || ||||||||||||||||    
T  10530306 aacaccattttcctaacagggtaatattaaactctctcaacctactaacactcatccctccatactccttt 10530376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 419
Target Start/End: Original strand, 17659640 - 17659690
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||||||||||||| |||||||||||| |||||||||||  ||||||||    
T  17659640 atggaagagattatacttgatggagcttttaagaaggaaagcgcatagaca 17659690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 291
Target Start/End: Original strand, 27288715 - 27288797
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaa 291  Q
    |||||||||||| ||||| | ||  |||||||| ||| ||| |||  |||||| ||| |||||||||||||||||||||||||    
T  27288715 ccaacaccattttcctaataaagatatattaaattccttcatccttctaaccctcaagcctccatactcctttctcaaacaaa 27288797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 374 - 419
Target Start/End: Original strand, 25193892 - 25193937
Alignment:
Q  374 agagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||    
T  25193892 agagattatacctgacagagctttgaagaaggaaagagcatagaca 25193937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 207 - 275
Target Start/End: Original strand, 6245719 - 6245787
Alignment:
Q  207 cgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatac 275  Q
    ||||||||| |||||||||||| |||  |||||||||||  |||| || | ||||||||||||||||||    
T  6245719 cgccaacacaatttacctaacaaagcgctattaaactcctgcaacttcctcacccccaaccctccatac 6245787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 12332649 - 12332697
Alignment:
Q  371 ggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||| ||||||||||||||||| ||||||||||| ||| ||||||||    
T  12332649 ggaagaaattatacctgatggagccttgaagaaggagagagcatagaca 12332697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 36493182 - 36493230
Alignment:
Q  371 ggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||| ||||||||||| ||||| ||||||||||||||| ||||||||    
T  36493182 ggaagaaattatacctgacggagccttgaagaaggaaagagcatagaca 36493230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 265
Target Start/End: Original strand, 40366287 - 40366343
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaa 265  Q
    ||||||||||||||| |||||| | | ||||||||||||||||| | ||||||||||    
T  40366287 ccaacaccatttaccaaacagaaccacattaaactccctcaaccgcctaacccccaa 40366343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 505
Target Start/End: Complemental strand, 4987397 - 4987270
Alignment:
Q  378 attatacctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatc 477  Q
    ||||||||||| |||||||||||||| |||||| |||||||| | ||||   | |  | ||| ||||| ||||| | ||| ||||| ||||||||||| |    
T  4987397 attatacctgacggagctttgaagaaagaaagagcatagacaggtagagaggtcaacacagatttgagaagaaccaaacggccaccaaaagaaaggaaac 4987298  T
Q  478 aaatatgccaaccagacaatctagattt 505  Q
     | ||| |||||| |||| |||||||||    
T  4987297 gactattccaacctgacagtctagattt 4987270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 410
Target Start/End: Original strand, 8445612 - 8445653
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaaga 410  Q
    |||||||| || |||||||| |||||||||||||||||||||    
T  8445612 atggaagaaatgatacctgaaggagctttgaagaaggaaaga 8445653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 426
Target Start/End: Original strand, 12341366 - 12341423
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    ||||||||||||||||| ||  |||||||||| ||||||||| | |||||| ||||||    
T  12341366 atggaagagattatacccgacagagctttgaaaaaggaaagagcgtagacaggcagag 12341423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 381 - 426
Target Start/End: Original strand, 15539868 - 15539913
Alignment:
Q  381 atacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    |||||||| ||||||||||||||||||||| |||| ||| ||||||    
T  15539868 atacctgacggagctttgaagaaggaaagagcataaacaggcagag 15539913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 26774585 - 26774540
Alignment:
Q  372 gaagagattatacctgatggagctttgaagaaggaaagaccataga 417  Q
    ||||||||||||| ||| ||||||||||||||||| ||| ||||||    
T  26774585 gaagagattatacatgacggagctttgaagaaggagagagcataga 26774540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 98; Significance: 1e-47; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 87 - 508
Target Start/End: Original strand, 3769 - 4190
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||||||||||| ||||||  | |||||||| ||||||||| ||||||  |  ||||||  |||||||||||||||||| |||||| | | |||||||     
T  3769 ctcactatctccctccaccacgacgaacaactccggcccccaacctccaaacctccatccgtcacaccatacctagccactaacacctttctccacaaag 3868  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaa 286  Q
    |||| | ||||| |||||| ||||||||||||||||| |||| |||||| |||||||||||||| ||| ||||| ||||||||||||||||||| | |||    
T  3869 catccctctccaataacaaccgccaacaccatttacccaacaaagcaatgttaaactccctcaatctcgtaacctccaaccctccatactccttccgcaa 3968  T
Q  287 acaaacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacct 386  Q
    ||  | || |  ||| |  | |||||| ||||| || | | |||||| |||   ||        ||||| || ||| |||  ||||||||||||||||||    
T  3969 actcagagtatcccacctaacccaagatatttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacct 4068  T
Q  387 gatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgcc 486  Q
    || ||||||||||| ||||||||  |||||||| | |||||| | | ||  ||||| || ||||  | |||||||||||| |||||||| ||| | |||     
T  4069 gacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaatcaaacgaccaccgaaggaaaggaaccaactttgcg 4168  T
Q  487 aaccagacaatctagatttaat 508  Q
    |||||||||| |||||||||||    
T  4169 aaccagacaacctagatttaat 4190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 9e-46; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 9e-46
Query Start/End: Original strand, 91 - 289
Target Start/End: Original strand, 14440265 - 14440463
Alignment:
Q  91 ctatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatc 190  Q
    ||||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||| ||| |||||||||||||| ||||||||||||||||||| || |    
T  14440265 ctatctccctccaccacgaagaacaactccggcccccatcctccaaaccaccatccgccataccatacctagccaacaacaccctacaccacaaaccacc 14440364  T
Q  191 accctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaaca 289  Q
     |  || |||||||||||||||||||||||  | ||||||||||| |||||||| ||||||||| |||| |||||||||||||||||| | ||||||||    
T  14440365 cctatcaactaacaaacgccaacaccatttcaccaacagagcaatgttaaactctctcaacctcctaacacccaaccctccatactccctcctcaaaca 14440463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 87 - 281
Target Start/End: Original strand, 28253237 - 28253431
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||||||||||| ||||||| |||||||||| ||||||||||||||||  |  |||||| |||||||||||||||||  ||||||| ||| ||| ||      
T  28253237 ctcactatctccctccaccaagaagaacaactccggcccccatcctccaaacctccatccgccacaccatacctagccctcaacaccttacgccataacc 28253336  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactccttt 281  Q
    | || | ||||||||||||||||||||||||||| |||||||| || | ||||||||| ||||||||| | || |||||||||||||||||||||    
T  28253337 cttccctctccactaacaaacgccaacaccattttcctaacagggctaaattaaactctctcaacctccttacacccaaccctccatactccttt 28253431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 5e-35
Query Start/End: Original strand, 33 - 268
Target Start/End: Original strand, 37445556 - 37445792
Alignment:
Q  33 gacacacacgacgcaaaccacccatcactcctaccttcaaccccatcccggattctcactatctcccaccaccaacaagaacaacttcggcccccatcct 132  Q
    |||||||||  || ||||||||||||||  ||||||   | ||| ||||| ||||||||   ||||||||||||  |||||||||| |||||||||||||    
T  37445556 gacacacactccgtaaaccacccatcaccactacctcttatcccgtcccgaattctcacacactcccaccaccacgaagaacaactccggcccccatcct 37445655  T
Q  133 ccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccattt-acctaacagag 231  Q
    ||| || ||  |||||| ||||||||||||||||||||||||||| ||| ||  ||||||  || ||||||| |||||||||||||||  || |||| ||    
T  37445656 ccaacctcctgtcctccgcaccatacctagccaccaacaccctacgccagaacccatcactatcaactaacagacgccaacaccatttcccccaacaaag 37445755  T
Q  232 caatattaaactccctcaacctcataacccccaaccc 268  Q
    |  | ||||||||||||||| || |||||||||||||    
T  37445756 cggtgttaaactccctcaacttcctaacccccaaccc 37445792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 2e-34
Query Start/End: Original strand, 140 - 319
Target Start/End: Original strand, 12646091 - 12646270
Alignment:
Q  140 cccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatatta 239  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||  |||| |  || |||||||| | |||||||||||| ||||||| | |||  |||    
T  12646091 cccatcctccacaccttacctagccaccaacaccctataccacaatccatctctatctactaacaacctccaacaccattttcctaacaaaacaaagtta 12646190  T
Q  240 aactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatccaagaaatttt 319  Q
    ||||| ||||||||| |||| |||||||||||||||||| | |||||||| | ||||  ||| || ||||||||||||||    
T  12646191 aactctctcaacctcctaacacccaaccctccatactccctcctcaaacacaaagaattccaaccaatccaagaaatttt 12646270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 90 - 289
Target Start/End: Complemental strand, 33515827 - 33515628
Alignment:
Q  90 actatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcat 189  Q
    |||||||||| ||||||  ||||||| || || |||||||||||||  |  |||||| |||||||||||||||||||||||||||||| ||||||  |||    
T  33515827 actatctccctccaccacgaagaacagctccgacccccatcctccaaaccaccatccgccacaccatacctagccaccaacaccctacgccacaacccat 33515728  T
Q  190 caccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaaca 289  Q
    | |  || |||||||| || ||||||||||| |||| || |||||| |||||||| || || ||| |||| |||| ||| ||||||||| | ||||||||    
T  33515727 ctctatcaactaacaaccgtcaacaccatttccctagcaaagcaatgttaaactctcttaatctcctaacacccagccccccatactccctcctcaaaca 33515628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 4e-26
Query Start/End: Original strand, 101 - 254
Target Start/End: Original strand, 43310790 - 43310943
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccact 200  Q
    ||||||| |||||| ||| ||||||||| |||||| || |||||||||| | ||||| || ||||||||||||||| ||||||||  |   | ||||||     
T  43310790 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcgccatatctcgccaccaacaccctataccacaaactactcctctccacc 43310889  T
Q  201 aacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctc 254  Q
    || ||||||||||||||||| |||||||  |||| |||||||||||||||||||    
T  43310890 aataaacgccaacaccatttgcctaacaacgcaacattaaactccctcaacctc 43310943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 101 - 250
Target Start/End: Original strand, 26146746 - 26146895
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccact 200  Q
    ||||||| || ||| ||| ||||||||| |||||| || |||||||||| | ||||| || ||||||||||||||| ||||||||  |   | ||||||     
T  26146746 ccaccaagaataaccactccggcccccaacctccaacctcccatcctcctcgccatatctcgccaccaacaccctataccacaaactactcctctccacc 26146845  T
Q  201 aacaaacgccaacaccatttacctaacagagcaatattaaactccctcaa 250  Q
    |||||||||||||||||||| |||||||  |||| |||||||||||||||    
T  26146846 aacaaacgccaacaccatttgcctaacaacgcaacattaaactccctcaa 26146895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 209 - 426
Target Start/End: Complemental strand, 28400051 - 28399834
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatc 308  Q
    |||||||||||||||||  | |||||||||||||||| |||| | | |||||||||| |||||| |||||||| |  |||| | ||||  ||| ||||||    
T  28400051 ccaacaccatttacctagtaaagcaatattaaactccttcaatcgcctaacccccaaacctccaaactccttttttgaacacaaagaatcccaacctatc 28399952  T
Q  309 caagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaa 408  Q
    |||| |||||| |||    |||||| |||   ||        |||||||||||| |||  ||||||||||||||||||| ||||||||||||||| ||||    
T  28399951 caagtaatttttctacaatcctcactcccaccccaaaaaaaattattcaataaagattcaatggaagagattatacctgctggagctttgaagaaagaaa 28399852  T
Q  409 gaccatagacatgcagag 426  Q
    || |||||||| ||||||    
T  28399851 gagcatagacaggcagag 28399834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 209 - 415
Target Start/End: Complemental strand, 11233991 - 11233784
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatc 308  Q
    |||||||||||||||||||| ||||| |||||||||||||||| || ||||||||||||||||| ||||||||    |||| | || |  ||| ||||||    
T  11233991 ccaacaccatttacctaacaaagcaaaattaaactccctcaacttcctaacccccaaccctccagactcctttgaagaacacaaagtattccaacctatc 11233892  T
Q  309 caagaaattttcctatgtccctcac-accccttccnnnnnnnnttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaa 407  Q
    |||| |||||||| | |  ||||||  ||||  ||        |||||||| ||| |||  |||||||||| |||||||||||||||||| |||||||||    
T  11233891 caagtaattttccgacggtcctcactcccccccccaaaaaaaattattcaacaaagattcaatggaagagactatacctgatggagctttaaagaaggaa 11233792  T
Q  408 agaccata 415  Q
    ||| ||||    
T  11233791 agagcata 11233784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 7e-22
Query Start/End: Original strand, 209 - 419
Target Start/End: Complemental strand, 9668507 - 9668297
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatc 308  Q
    ||||||| |||||||||||| |||||  |||||||||||||||||| |||||||||||||| || ||||||||    |||| | || |  ||| ||||||    
T  9668507 ccaacactatttacctaacaaagcaaagttaaactccctcaacctcctaacccccaacccttcagactcctttggagaacacaaagtattccaacctatc 9668408  T
Q  309 caagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaa 408  Q
    |||| |||||||| | |  |||||| ||||  ||        |||||||| ||| |||  ||||||||||||||| ||||||||||||| |||||||| |    
T  9668407 caagtaattttccgacggtcctcactccccccccaaaaaaaattattcaacaaagattcaatggaagagattatatctgatggagctttaaagaaggaca 9668308  T
Q  409 gaccatagaca 419  Q
    || ||||||||    
T  9668307 gagcatagaca 9668297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 351 - 419
Target Start/End: Complemental strand, 8065620 - 8065552
Alignment:
Q  351 ttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||||||||| |||  |||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  8065620 ttattcaataaagattcaatggaagagattatacctgatggagctttgaagaaggaaaaagcatagaca 8065552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 351 - 505
Target Start/End: Complemental strand, 33515552 - 33515398
Alignment:
Q  351 ttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaa 450  Q
    ||||| || ||| |||| |||||||||||| ||||||| ||||||||||| ||||||||  |||||||| | || ||| | | ||  || ||| | ||||    
T  33515552 ttatttaacaaagatttaatggaagagattgtacctgacggagctttgaaaaaggaaagtgcatagacaggaagtgcagtcaggacggatttgcgaagaa 33515453  T
Q  451 cgagacgaccaccgaaagaaaggaatcaaatatgccaaccagacaatctagattt 505  Q
      ||||||| ||| ||||||||||| | | |||||||||||||||||||||||||    
T  33515452 tcagacgactaccaaaagaaaggaaccgactatgccaaccagacaatctagattt 33515398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 209 - 295
Target Start/End: Complemental strand, 33583928 - 33583842
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacaga 295  Q
    |||||||||||||| ||||| ||| ||||||||||||||||||  | | ||||||||||||||||||||||||   |||||||||||    
T  33583928 ccaacaccatttacttaacaaagctatattaaactccctcaactgccttacccccaaccctccatactccttttgtaaacaaacaga 33583842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 198 - 419
Target Start/End: Original strand, 35488465 - 35488687
Alignment:
Q  198 actaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaag 297  Q
    |||||||| | |||||||||||||||||  | ||||| |||||||||| ||||| || |||||||||| ||||||| |||| || |  |||| |||| |     
T  35488465 actaacaacctccaacaccatttacctagtaaagcaacattaaactccttcaacttcctaacccccaaacctccatgctccattttagaacacacagtat 35488564  T
Q  298 accatcctatccaagaaattttcctatgtccctcacaccc-cttccnnnnnnnnttattcaataaatattttatggaagagattatacctgatggagctt 396  Q
     ||| ||||||||||||||||| |||    |||||| ||| |  |         |||||||||||| |||  |||||||||||||||||||| |||||||    
T  35488565 tccaacctatccaagaaatttttctaaaaacctcactcccaccccaaaaaaaaattattcaataaagattcaatggaagagattatacctgaaggagctt 35488664  T
Q  397 tgaagaaggaaagaccatagaca 419  Q
    | |||||||||| | ||||||||    
T  35488665 taaagaaggaaaaagcatagaca 35488687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 195 - 419
Target Start/End: Original strand, 15018302 - 15018526
Alignment:
Q  195 tccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacag 294  Q
    |||||| |||| | |||||||||||| ||||| |  ||||||||||||||| |||||    ||||||  ||||||||| ||||||||   | ||||||||    
T  15018302 tccactgacaacctccaacaccatttccctaataaggcaatattaaactccttcaactgtctaacccataaccctccaaactccttttggagacaaacag 15018401  T
Q  295 aagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacctgatggagc 394  Q
    ||  |||  |||||||||| ||||||||||   |||||| ||| | ||         |||| |||||| |||  |||| ||||||||||||||| |||||    
T  15018402 aactccaagctatccaagatattttcctataatcctcacccccatcccaaaaaaaaatattaaataaagattcaatggtagagattatacctgacggagc 15018501  T
Q  395 tttgaagaaggaaagaccatagaca 419  Q
    |||||||||||||||  ||||||||    
T  15018502 tttgaagaaggaaagtgcatagaca 15018526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 207 - 419
Target Start/End: Original strand, 45422157 - 45422369
Alignment:
Q  207 cgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaagaccatccta 306  Q
    |||||||||||||||||||||| |||| ||||||| ||| |||||    | |||||||| ||||||| ||||||| |  |||||||||    ||| ||||    
T  45422157 cgccaacaccatttacctaacaaagcactattaaattccttcaactgtctcacccccaaacctccattctcctttgtggaacaaacagttttccagccta 45422256  T
Q  307 tccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacctgatggagctttgaagaagga 406  Q
    |||||| |||||| |||||  ||||||| |||  ||        | ||| |||||| |||  | |||||| |||||||||||||||||||||||||| ||    
T  45422257 tccaagtaatttttctatgatcctcacatcccccccaaaaaaaatgattaaataaagattcaagggaagaaattatacctgatggagctttgaagaaaga 45422356  T
Q  407 aagaccatagaca 419  Q
    |||  ||||||||    
T  45422357 aagggcatagaca 45422369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 369 - 508
Target Start/End: Original strand, 12646349 - 12646488
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaag 468  Q
    |||||||||||||||||||  ||||||||||| ||||||||| |||||||| | || ||| ||| ||  || ||||| ||||  || |||||||| || |    
T  12646349 atggaagagattatacctggcggagctttgaaaaaggaaagagcatagacaggaagcgcagttaggacggatttgagaagaattaggcgaccaccaaagg 12646448  T
Q  469 aaaggaatcaaatatgccaaccagacaatctagatttaat 508  Q
    | ||||| | | |||||||||  |||||||||||||||||    
T  12646449 agaggaaccgactatgccaacttgacaatctagatttaat 12646488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 207 - 295
Target Start/End: Original strand, 11196988 - 11197076
Alignment:
Q  207 cgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacaga 295  Q
    |||||||||||||| ||||||| |||  ||||||| |||  ||||||| | ||||||||||||||||||||| | | ||||||||||||    
T  11196988 cgccaacaccatttgcctaacaaagcgctattaaattcctgcaacctccttacccccaaccctccatactccctacacaaacaaacaga 11197076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 351 - 409
Target Start/End: Complemental strand, 25380753 - 25380695
Alignment:
Q  351 ttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaag 409  Q
    |||||||||||| |||  || |||||||||||||||||||||||||||||||| |||||    
T  25380753 ttattcaataaagattcaatagaagagattatacctgatggagctttgaagaaagaaag 25380695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 369 - 419
Target Start/End: Complemental strand, 33583769 - 33583719
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||||||||    
T  33583769 atggaagagattatacctgacggagctttgaaaaaggaaagagcatagaca 33583719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 368 - 421
Target Start/End: Original strand, 13416484 - 13416537
Alignment:
Q  368 tatggaagagattatacctgatggagctttgaagaaggaaagaccatagacatg 421  Q
    ||||||||||||| |||||| |||||| ||||||||||||||| ||||||||||    
T  13416484 tatggaagagattgtacctgctggagccttgaagaaggaaagagcatagacatg 13416537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 375 - 508
Target Start/End: Original strand, 13551387 - 13551520
Alignment:
Q  375 gagattatacctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaagga 474  Q
    |||||||||||||||||||||||||||||||||||  |||||||| ||| ||   | | || ||| ||||| ||||| |  |||||||| ||||| || |    
T  13551387 gagattatacctgatggagctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaa 13551486  T
Q  475 atcaaatatgccaaccagacaatctagatttaat 508  Q
    | | | ||| |||||| |||| ||||||||||||    
T  13551487 accgactattccaacctgacagtctagatttaat 13551520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 368 - 419
Target Start/End: Complemental strand, 6724974 - 6724923
Alignment:
Q  368 tatggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    ||||||||||||| |||||| |||||| ||||||||||||||| ||||||||    
T  6724974 tatggaagagattgtacctgctggagccttgaagaaggaaagagcatagaca 6724923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 13416202 - 13416285
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaa 184  Q
    |||||||  ||||| ||| |||||||||||||||| || ||||||   ||||||||||||||| |||||||||| | |||||||    
T  13416202 ccaccaaatagaaccactccggcccccatcctccaacctcccatcacgcacaccatacctagcaaccaacacccgataccacaa 13416285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 13550718 - 13550841
Alignment:
Q  171 accctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctc 270  Q
    |||||| ||||||||||| | |  || || ||||| | |||||||||||| |||||||  || |||||||||||| |||| ||| | |||||||| || |    
T  13550718 accctataccacaaatcacctctatcaaccaacaacctccaacaccatttccctaacaatgctatattaaactccttcaatctcctcacccccaaaccgc 13550817  T
Q  271 catactcctttctcaaacaaacag 294  Q
    || |||||||| | ||||||||||    
T  13550818 cacactccttttttaaacaaacag 13550841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 13551171 - 13551294
Alignment:
Q  171 accctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctc 270  Q
    |||||| ||||||||||| | |  || || ||||| | |||||||||||| |||||||  || |||||||||||| |||| ||| | |||||||| || |    
T  13551171 accctataccacaaatcacctctatcaaccaacaacctccaacaccatttccctaacaatgctatattaaactccttcaatctcctcacccccaaaccgc 13551270  T
Q  271 catactcctttctcaaacaaacag 294  Q
    || |||||||| | ||||||||||    
T  13551271 cacactccttttttaaacaaacag 13551294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 273
Target Start/End: Original strand, 20004483 - 20004662
Alignment:
Q  95 ctcccaccaccaacaagaacaacttcggccccc-atcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcacc 193  Q
    ||||||||||||  |||||||||| |  ||||| |||||||| || |||  | ||| |||| || | ||||||||| |||||| ||||||||||  | |     
T  20004483 ctcccaccaccacgaagaacaactccaaccccccatcctccaacctccctacatcctcaccgtaaccagccaccaataccctataccacaaatctcccct 20004582  T
Q  194 ctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccat 273  Q
     || |||||||  | ||||||||||||  |||||| |||| | ||||||||||||| | || |||||||||| |||||||    
T  20004583 atcaactaacatcctccaacaccatttttctaacaaagcagtgttaaactccctcatcttcctaacccccaaacctccat 20004662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 369 - 508
Target Start/End: Original strand, 28253528 - 28253667
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaag 468  Q
    |||||||||||||||||||| | | ||||||| ||||||||  |||||||||| |||||| | | ||  |||||||| || |  || |||||||| ||||    
T  28253528 atggaagagattatacctgacgaaactttgaaaaaggaaagtgcatagacatgaagagcagtcaggacggacttgagaaggattaggcgaccaccaaaag 28253627  T
Q  469 aaaggaatcaaatatgccaaccagacaatctagatttaat 508  Q
    | || || | | || | |||||||||| ||||||||||||    
T  28253628 agagaaaccgactacgacaaccagacagtctagatttaat 28253667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 372 - 419
Target Start/End: Complemental strand, 44028551 - 44028504
Alignment:
Q  372 gaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    ||||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  44028551 gaagagattatacatgatggagccttgaagaaggaaagagcatagaca 44028504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 419
Target Start/End: Complemental strand, 2207163 - 2207113
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||||||||| |||||| |||||| ||||||||||||||| ||||||||    
T  2207163 atggaagagattgtacctgctggagccttgaagaaggaaagagcatagaca 2207113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 268
Target Start/End: Original strand, 37437559 - 37437688
Alignment:
Q  140 cccatcctccacaccatacc-tagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatatt 238  Q
    ||||||||||  |||||||| ||||||||||||| |  | ||| ||  ||||||  || ||||||| ||||||||||||||| || |||| |||  | ||    
T  37437559 cccatcctccgtaccataccctagccaccaacactcancgccagaacccatcactatcaactaacagacgccaacaccatttccccaacaaagcggtgtt 37437658  T
Q  239 aaactccctcaacctcataacccccaaccc 268  Q
    ||||||||||||| |  |||||||||||||    
T  37437659 aaactccctcaactttctaacccccaaccc 37437688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 15127102 - 15127057
Alignment:
Q  207 cgccaacaccatttacctaacagagcaatattaaactccctcaacc 252  Q
    |||||||||||||||||||||| | ||| |||||||||||||||||    
T  15127102 cgccaacaccatttacctaacataacaacattaaactccctcaacc 15127057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 10689178 - 10689238
Alignment:
Q  194 ctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctc 254  Q
    |||||| || |||||||||||||| || |||||||  |||| |||||||||||||||||||    
T  10689178 ctccaccaataaacgccaacaccactttcctaacaacgcaacattaaactccctcaacctc 10689238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 26147016 - 26147064
Alignment:
Q  371 ggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||| ||||||||||| ||||| ||||||||||||||| ||||||||    
T  26147016 ggaagaaattatacctgacggagccttgaagaaggaaagagcatagaca 26147064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 207 - 259
Target Start/End: Complemental strand, 42051774 - 42051722
Alignment:
Q  207 cgccaacaccatttacctaacagagcaatattaaactccctcaacctcataac 259  Q
    ||||||||||||||||||||||| |||| |||||| ||||| |||||| ||||    
T  42051774 cgccaacaccatttacctaacagggcaacattaaattcccttaacctcctaac 42051722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 43311060 - 43311108
Alignment:
Q  371 ggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||| ||||||||||| ||||| ||||||||||||||| ||||||||    
T  43311060 ggaagaaattatacctgacggagccttgaagaaggaaagagcatagaca 43311108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 207 - 279
Target Start/End: Complemental strand, 43722546 - 43722474
Alignment:
Q  207 cgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcct 279  Q
    ||||||||||||||||||||||  |||| |||||||||||||| | ||   |||||||| |||||| ||||||    
T  43722546 cgccaacaccatttacctaacaacgcaacattaaactccctcatcttctgcacccccaaacctccaaactcct 43722474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 419
Target Start/End: Original strand, 20004747 - 20004794
Alignment:
Q  372 gaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||||||||||||||| |||||||||||||||| |||  |||||||    
T  20004747 gaagagattatacctgatagagctttgaagaaggagagagtatagaca 20004794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 135
Target Start/End: Original strand, 15018180 - 15018242
Alignment:
Q  73 ccccatcccggattctcactatctcccaccaccaacaagaacaacttcggcccccatcctcca 135  Q
    |||||||||  || ||| ||| ||||| ||||||| |||||||||||||||||||| ||||||    
T  15018180 ccccatccctaatcctccctacctcccgccaccaagaagaacaacttcggcccccaacctcca 15018242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 247
Target Start/End: Complemental strand, 30504820 - 30504774
Alignment:
Q  201 aacaaacgccaacaccatttacctaacagagcaatattaaactccct 247  Q
    |||||| |||||||| | || ||||||||||||||||||||||||||    
T  30504820 aacaaatgccaacactacttccctaacagagcaatattaaactccct 30504774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 369 - 415
Target Start/End: Complemental strand, 43722367 - 43722321
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccata 415  Q
    |||||||| ||||||||||| ||||| ||||||||||||||| ||||    
T  43722367 atggaagaaattatacctgacggagccttgaagaaggaaagagcata 43722321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 278
Target Start/End: Original strand, 36804758 - 36804827
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcc 278  Q
    |||||||||||| ||||  | |||||||||||||||  ||||| || |||||||||||| ||||| ||||    
T  36804758 ccaacaccattttcctagtaaagcaatattaaactctttcaacttcctaacccccaaccatccatgctcc 36804827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 381 - 426
Target Start/End: Complemental strand, 39116346 - 39116301
Alignment:
Q  381 atacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    |||||||||||||| ||||| ||||||||| |||||||| ||||||    
T  39116346 atacctgatggagccttgaaaaaggaaagagcatagacaagcagag 39116301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 9e-43; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 9e-43
Query Start/End: Original strand, 87 - 508
Target Start/End: Original strand, 2554123 - 2554543
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    |||| |||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||| ||||||||||||||||||| |||||| | | |||||||     
T  2554123 ctcattatctccctccaccacgaagaacaactccggcccccatcctccaaacctccatccgccacaccatacctagccactaacacctttctccacaaag 2554222  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaa 286  Q
    | || | ||||| ||||||  |||||||||||||||| |||| |||||| |||||||| ||||||||| |||||| |||||||||||||||||| ||||     
T  2554223 cttccctctccaataacaactgccaacaccatttacccaacaaagcaatgttaaactctctcaacctcgtaaccctcaaccctccatactccttcctcat 2554322  T
Q  287 acaaacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacct 386  Q
    ||  | || |  ||| |  | |||||| ||||| || | | |||||| |||   ||        ||||| || ||| |||  |||||||||||||||||     
T  2554323 actcaaagtatcccacctaacccaagatatttttct-ttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattataccc 2554421  T
Q  387 gatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgcc 486  Q
    || ||||||||||| ||||||||  |||||||| | |||||| | | ||   |||| || ||||  | ||||||||||||||||||||| | | | || |    
T  2554422 gacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacgaactttagtagaatcaaacgaccaccgaaagaaaggaaccgactttgtc 2554521  T
Q  487 aaccagacaatctagatttaat 508  Q
    ||||||||||||||||||||||    
T  2554522 aaccagacaatctagatttaat 2554543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 3e-39
Query Start/End: Original strand, 87 - 502
Target Start/End: Complemental strand, 17605957 - 17605542
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||| ||||||| |||| || |||||||||| ||||||||||||||||  |  ||||||||||| ||||||||||||| ||||||||||| |||||||     
T  17605957 ctcacaatctccctccacaaagaagaacaactccggcccccatcctccaaaccaccatcctccacgccatacctagccaacaacaccctactccacaaac 17605858  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaa 286  Q
    |  | |  || |||||||  | |||||||||||| || |||| |||||| |||||||| ||||||||| |||| |||||||||||||||||| | |||||    
T  17605857 ctcccctatcaactaacagccaccaacaccatttccccaacaaagcaatgttaaactctctcaacctcctaacacccaaccctccatactccctcctcaa 17605758  T
Q  287 acaaacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacct 386  Q
    ||| | ||||  ||| || | ||||||||| || || |   | ||||| |||  ||        ||||| || ||| |||  || |||||||||||||||    
T  17605757 acacaaagaactccaaccaacccaagaaatctttcttttatcatcacaacccccccaaaaaaaattatttaacaaagattcaatagaagagattatacct 17605658  T
Q  387 gatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgcc 486  Q
    |||||||||||||| ||||||||  |||||||| | || ||| | | || ||| ||||| || |  | ||||||||| || |||||| | | | ||||||    
T  17605657 gatggagctttgaaaaaggaaagcgcatagacaggaagcgcagtcaagacagatttgagaagtatcaaacgaccaccaaaggaaaggtacctattatgcc 17605558  T
Q  487 aaccagacaatctaga 502  Q
    ||| ||||||||||||    
T  17605557 aactagacaatctaga 17605542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 87 - 508
Target Start/End: Original strand, 13938236 - 13938656
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||||||||||  ||||||| | |||||||| ||||||||||||||||  |  |||||| || |||||||||||||||| |||||||||| |||| ||     
T  13938236 ctcactatctcctgccaccaagatgaacaactccggcccccatcctccaaaccaccatccgccgcaccatacctagccactaacaccctacgccac-aac 13938334  T
Q  187 catcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaa 286  Q
    |||| | ||| |||||||| | |||||||||||| | ||||| |||||| |||||||| ||||| ||| |||| |||| |||||| |||||||| |||||    
T  13938335 catctctctctactaacaacctccaacaccattttcttaacaaagcaatgttaaactctctcaatctcctaacacccatccctccgtactccttcctcaa 13938434  T
Q  287 acaaacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacct 386  Q
    ||| | ||||  ||| |  ||||| || ||||| || |   ||||||  |||  ||        ||||| || ||| |||  ||||||||||||||||||    
T  13938435 acataaagaattccaactaatccacgatatttttcttttatcctcacttccccccccaaaaaatttatttaacaaagattcaatggaagagattatacct 13938534  T
Q  387 gatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgcc 486  Q
    || ||||||||||| ||||||||| |||||| | | || ||| | | || ||| ||||| || |  |  || ||||| ||||||||||| | | ||||||    
T  13938535 gacggagctttgaaaaaggaaagagcatagataggaagtgcagtcaggacagatttgagaaggatcaatcggccaccaaaagaaaggaaccgactatgcc 13938634  T
Q  487 aaccagacaatctagatttaat 508  Q
     |||||||||||||| ||||||    
T  13938635 gaccagacaatctagctttaat 13938656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 2e-34
Query Start/End: Original strand, 90 - 281
Target Start/End: Complemental strand, 14372611 - 14372420
Alignment:
Q  90 actatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcat 189  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||  |   | ||| |||||||||||||||||||||||||| ||| ||| ||  | |    
T  14372611 actatctccctccaccaagaagaacaactccggcccccatcctccaaactttcgtccgccacaccatacctagccaccaacaccttacgccataaccctt 14372512  T
Q  190 caccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactccttt 281  Q
    | | ||||||||||||||||| ||||||||| |||||||  || | ||||||||| || |||||  |||| |||||||||||||||||||||    
T  14372511 ccctctccactaacaaacgcctacaccattttcctaacaaggctaaattaaactctcttaaccttctaacacccaaccctccatactccttt 14372420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 8e-34
Query Start/End: Original strand, 90 - 316
Target Start/End: Complemental strand, 10576870 - 10576644
Alignment:
Q  90 actatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcat 189  Q
    |||||||||| ||||||  |||| ||||| ||||||||||||||||  |  |||||| |||||||||||||||||| ||||||||||| || |||| |      
T  10576870 actatctccctccaccacgaagagcaactccggcccccatcctccaaaccaccatccgccacaccatacctagccaacaacaccctactccgcaaacctc 10576771  T
Q  190 caccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaaca 289  Q
    | |  || |||||||  |||||||||||||| || |||| | |||| |||||||| ||||||||| |||| |||||||||||||||||| | ||||||||    
T  10576770 ccctatcaactaacagccgccaacaccatttccccaacaaaacaatgttaaactctctcaacctcctaacacccaaccctccatactccctcctcaaaca 10576671  T
Q  290 aacagaagaccatcctatccaagaaat 316  Q
     | ||||  ||| || |||||||||||    
T  10576670 caaagaactccaaccaatccaagaaat 10576644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 1e-32
Query Start/End: Original strand, 88 - 508
Target Start/End: Complemental strand, 18682196 - 18681776
Alignment:
Q  88 tcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatc 187  Q
    |||||||||||| ||||||| |||||||||| ||||||||||||||||  |  |||||||||  ||||||||| |||||||||||| ||||||| ||  |    
T  18682196 tcactatctcccgccaccaagaagaacaactccggcccccatcctccaaacctccatcctccgaaccatacctggccaccaacaccttacaccataaccc 18682097  T
Q  188 atcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaa 287  Q
     || |  || |||||||| | |||||||||||| ||||||| |||| | ||||| ||||||||||||  ||  |||||||||  ||||||||| |||| |    
T  18682096 ctctctgtcaactaacaacctccaacaccattttcctaacaaagcagtgttaaaatccctcaacctccgaaaacccaaccctttatactccttcctcata 18681997  T
Q  288 caaacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacctg 387  Q
    |||| ||||  |||||   ||||||||||||| || |   |||||| |||   ||        ||||| || ||| |||  |||| |||||||||||| |    
T  18681996 caaatagaattccatctagtccaagaaatttttcttttatcctcactccctccccaaaaaaatttatttaacaaagattcaatgggagagattatacccg 18681897  T
Q  388 atggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgcca 487  Q
    ||||||||||||| ||||||||| | |||||| | ||   | | | || ||| ||||| || |  | ||||||||| ||| ||||||| | | |||||||    
T  18681896 atggagctttgaaaaaggaaagagcgtagacaggaagtctagtcaggacagatttgagcaggatcaaacgaccaccaaaataaaggaaccgactatgcca 18681797  T
Q  488 accagacaatctagatttaat 508  Q
    ||||| |||||||| ||||||    
T  18681796 accagtcaatctagctttaat 18681776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 1e-32
Query Start/End: Original strand, 141 - 285
Target Start/End: Complemental strand, 24766983 - 24766839
Alignment:
Q  141 ccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaa 240  Q
    |||||| |||||||||||||||||||||||||| | | ||||||| | || |  || | |||||| |||||||||||||||||||||| ||||| |||||    
T  24766983 ccatccgccacaccatacctagccaccaacacctttcgccacaaagcttccctatctagtaacaaccgccaacaccatttacctaacaaagcaacattaa 24766884  T
Q  241 actccctcaacctcataacccccaaccctccatactcctttctca 285  Q
    |||| || |||||| ||||||||||||||||||||||||| ||||    
T  24766883 actctcttaacctcgtaacccccaaccctccatactccttcctca 24766839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 3e-27
Query Start/End: Original strand, 140 - 502
Target Start/End: Complemental strand, 21629692 - 21629330
Alignment:
Q  140 cccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccc-tccactaacaaacgccaacaccatttacctaacagagcaatatt 238  Q
    |||||||||||| ||||||||||||| ||||||||||| ||||||| | |||||  || |||||||  ||||||||| |||| || |||| |||||| ||    
T  21629692 cccatcctccacgccatacctagccaacaacaccctactccacaaacc-tcacctatcaactaacagccgccaacacaatttccccaacaaagcaatgtt 21629594  T
Q  239 aaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatccaagaaattttcctatgtccctcacacccc 338  Q
    |||||| ||||||||| |||| |||||||||||||||||| | |||||||| | ||||  ||| || | ||||||||| || || |   ||||||| |||    
T  21629593 aaactctctcaacctcctaacacccaaccctccatactccctcctcaaacacaaagaactccaaccaacccaagaaatctttcttttatcctcacaaccc 21629494  T
Q  339 ttccnnnnnnnnttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatag 438  Q
      ||        ||||| || ||  |||  || ||||||||||||||||| ||||||||||| ||||||||  |||||||| | || ||| | | || ||    
T  21629493 ccccaaaaaaaattatttaacaaggattcaatagaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggaagcgcagtcaagacag 21629394  T
Q  439 acttgaggagaacgagacgaccaccgaaagaaaggaatcaaatatgccaaccagacaatctaga 502  Q
    | ||||| || |  |  |||||||| || |||||| | | | ||||||||||||||||||||||    
T  21629393 atttgagaagtatcaagcgaccaccaaaggaaaggtacctactatgccaaccagacaatctaga 21629330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 7e-22
Query Start/End: Original strand, 93 - 296
Target Start/End: Complemental strand, 17577335 - 17577130
Alignment:
Q  93 atctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcac 192  Q
    ||||||| ||||||  ||||||||||  |||||||||||||||  |   |||||||||| ||||||||||||| ||||||||||| ||||||| |  | |    
T  17577335 atctccctccaccacaaagaacaactctggcccccatcctccaaaccatcatcctccacgccatacctagccaacaacaccctactccacaaacctcccc 17577236  T
Q  193 cctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctc--ataacccccaaccctccatactcctttctcaaacaa 290  Q
      || |||||||  | |||||||||||| || |||| |||||| |||||||| | |||||||  ||||| ||||||||||||| |||| | ||||| ||     
T  17577235 tatcaactaacagcctccaacaccatttccccaacaaagcaatgttaaactctcgcaacctcctataacacccaaccctccatgctccctcctcaagcac 17577136  T
Q  291 acagaa 296  Q
    ||||||    
T  17577135 acagaa 17577130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 84 - 157
Target Start/End: Original strand, 10922067 - 10922140
Alignment:
Q  84 attctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccata 157  Q
    |||||||||||||||| ||||||| |||||||||| ||||||||||||| |||||  |||||||||||||||||    
T  10922067 attctcactatctccctccaccaagaagaacaactccggcccccatccttcagccttccatcctccacaccata 10922140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 351 - 426
Target Start/End: Original strand, 21549628 - 21549703
Alignment:
Q  351 ttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    |||||||||||| |||  ||||||||||||||||||| ||||||||||||||| |||||| |||||||| ||||||    
T  21549628 ttattcaataaagattcaatggaagagattatacctgttggagctttgaagaaagaaagagcatagacaagcagag 21549703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 90 - 287
Target Start/End: Complemental strand, 20882653 - 20882456
Alignment:
Q  90 actatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacacc-atacctagccaccaacaccctacaccacaaatca 188  Q
    |||||||||| ||||||  |||||||||| |||||||  |||||||  |  |||||| ||||||  ||||||||| |||||||||||||    |||| ||    
T  20882653 actatctccctccaccacgaagaacaactccggccccg-tcctccaaaccaccatccgccacacttatacctagcgaccaacaccctacgttgcaaacca 20882555  T
Q  189 tcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaa 287  Q
    || |   | |||||||| ||||||||||||||  | |||| |||||| |||||||| ||||||||| |||| |||| ||||||||||||| | ||||||    
T  20882554 tccctaacaactaacaaccgccaacaccatttctccaacaaagcaatgttaaactctctcaacctcctaacacccatccctccatactccctcctcaaa 20882456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 369 - 426
Target Start/End: Complemental strand, 649414 - 649357
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||    
T  649414 atggaagagattatacctgatggagctttgaagaaggaaagcgcatagacaggcagag 649357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 195 - 419
Target Start/End: Complemental strand, 503047 - 502823
Alignment:
Q  195 tccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacag 294  Q
    ||||||||||  | |||||||||||| ||||  |  ||||||||||||||| |||||    ||||||| ||||||||| ||||||||   | ||||||||    
T  503047 tccactaacatcctccaacaccatttccctagtaaggcaatattaaactccttcaactgtctaacccctaaccctccaaactccttttgtagacaaacag 502948  T
Q  295 aagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnnttattcaataaatattttatggaagagattatacctgatggagc 394  Q
    |   ||| ||||||||||| |||||||||||  |||||| |||   ||        ||||| |||||| |||  | || ||||||||||||||| |||||    
T  502947 agctccaacctatccaagacattttcctatgatcctcactcccaccccaaaaaaaattattaaataaagattcaagggtagagattatacctgacggagc 502848  T
Q  395 tttgaagaaggaaagaccatagaca 419  Q
    ||||||||| |||||| ||||||||    
T  502847 tttgaagaaagaaagagcatagaca 502823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 209 - 281
Target Start/End: Original strand, 13086178 - 13086250
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactccttt 281  Q
    |||||||||||||||||||| ||||| |||||||||| ||||| || |||||||||||||||||  |||||||    
T  13086178 ccaacaccatttacctaacaaagcaacattaaactccttcaacttcctaacccccaaccctccagcctccttt 13086250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 319
Target Start/End: Complemental strand, 15956561 - 15956383
Alignment:
Q  140 cccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatatta 239  Q
    ||||||| |||||||||||||||||||||||||| ||| |||||| |  || |  || | |||||| |||||| ||||||| || ||||| |||||||||    
T  15956561 cccatccgccacaccatacctagccaccaacaccttacgccacaact-ttctctatcaattaacaaccgccaaaaccattttcccaacagggcaatatta 15956463  T
Q  240 aactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatccaagaaatttt 319  Q
    || || ||||||| | ||||   || |||||||||||||||| | ||||| | ||||  ||| || |||||||| |||||    
T  15956462 aagtctctcaaccacctaacaaacatccctccatactccttttttaaacacaaagaatcccaaccaatccaagatatttt 15956383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 146 - 295
Target Start/End: Complemental strand, 14843701 - 14843552
Alignment:
Q  146 ctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactcc 245  Q
    |||| ||||||| || || |||| ||||||| |||| ||| |||| |  || || ||||  |||||||||||||||||||||| | || |||||||||||    
T  14843701 ctcctcaccatatctcgctaccagcaccctataccaaaaaccatctctatctaccaacattcgccaacaccatttacctaacaaatcactattaaactcc 14843602  T
Q  246 ctcaacctcataacccccaaccctccatactcctttctcaaacaaacaga 295  Q
    |||| | |  | || |||||||||||||||||||||   |||||||||||    
T  14843601 ctcagctttctcactcccaaccctccatactccttttgtaaacaaacaga 14843552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 369 - 409
Target Start/End: Complemental strand, 17078408 - 17078368
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaag 409  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17078408 atggaagagattatacctgatggagctttgaagaaggaaag 17078368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 291
Target Start/End: Original strand, 17228636 - 17228712
Alignment:
Q  215 ccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaa 291  Q
    |||||| ||||||| || |||||||||||||||||||||| | |||||||| |||||||  |||||| |||||||||    
T  17228636 ccatttccctaacaaagaaatattaaactccctcaacctcttcacccccaaacctccattatcctttttcaaacaaa 17228712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 5041980 - 5042066
Alignment:
Q  33 gacacacacgacgcaaaccacccatcactcctaccttcaaccccatcccggattctcactatctcccaccaccaacaagaacaacttc 120  Q
    ||||||||||   |||||||||| ||||  |||||||| |||||||| ||||||||||||||||||| ||||||| ||||| ||||||    
T  5041980 gacacacacgcaacaaaccaccc-tcacgactaccttctaccccatctcggattctcactatctccctccaccaaaaagaataacttc 5042066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 34434897 - 34434944
Alignment:
Q  207 cgccaacaccatttacctaacagagcaatattaaactccctcaacctc 254  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||    
T  34434897 cgccaacaccatttacctaacaatgcaatattaaactccctcaacctc 34434944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 369 - 419
Target Start/End: Complemental strand, 11060203 - 11060153
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||||||||    
T  11060203 atggaagagattatacctgatggaactttgaagaaggaaagcgcatagaca 11060153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 383 - 505
Target Start/End: Original strand, 29824777 - 29824899
Alignment:
Q  383 acctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaaggaatcaaata 482  Q
    |||||| ||||||||||| ||||||||| |  |||||||||||| ||| || | | ||||||| ||||| | |||||| |||||||| ||||| ||| |     
T  29824777 acctgacggagctttgaaaaaggaaagagcgaagacatgcagagaaatcataacaaacttgagaagaactaaacgacctccgaaagagaggaaacaactt 29824876  T
Q  483 tgccaaccagacaatctagattt 505  Q
    | || ||| ||||||||||||||    
T  29824877 ttccgacccgacaatctagattt 29824899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 369 - 410
Target Start/End: Original strand, 11469372 - 11469413
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaaga 410  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  11469372 atggaagagattaaacctgatggagctttgaagaaggaaaga 11469413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 351 - 428
Target Start/End: Complemental strand, 12673478 - 12673401
Alignment:
Q  351 ttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagagca 428  Q
    |||||||| | | ||| |||||||||||||||||  |||||| | ||||||||||||||| |||||||| ||||||||    
T  12673478 ttattcaaaagagattctatggaagagattatactagatggatcgttgaagaaggaaagagcatagacaggcagagca 12673401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 369 - 426
Target Start/End: Complemental strand, 13563271 - 13563214
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    |||||| ||||||||||||| ||||||||||| ||||||||| |||||||| ||||||    
T  13563271 atggaaaagattatacctgacggagctttgaaaaaggaaagagcatagacaggcagag 13563214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 324
Target Start/End: Original strand, 15674430 - 15674583
Alignment:
Q  171 accctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctc 270  Q
    |||||| |||||||| |||| |  ||||| ||||  |||||||||||||| ||||||| ||| | |||||||||| ||||  ||   |||||||| || |    
T  15674430 accctataccacaaaccatctcggtccaccaacatccgccaacaccattttcctaacaaagctaaattaaactccttcaatttccgcacccccaaaccgc 15674529  T
Q  271 catactcctttctcaaacaaacagaagaccatcctatccaagaaattttcctat 324  Q
    ||||||||||| | ||||||||||    ||| | || |||||||||||||||||    
T  15674530 catactccttttttaaacaaacagtttgccagcttaaccaagaaattttcctat 15674583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 351 - 428
Target Start/End: Complemental strand, 24766773 - 24766696
Alignment:
Q  351 ttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagagca 428  Q
    ||||| || ||| |||| |||||||||||||||||||| ||||||||||| ||||||||  |||||||| | ||||||    
T  24766773 ttatttaacaaagatttaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagca 24766696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 374 - 419
Target Start/End: Original strand, 25351027 - 25351072
Alignment:
Q  374 agagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||    
T  25351027 agagattatacctgacggagctttgaagaaggaaagagcatagaca 25351072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 375 - 508
Target Start/End: Original strand, 26206138 - 26206271
Alignment:
Q  375 gagattatacctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaagga 474  Q
    |||||||||||||||||||||||||||||||||||  |||||||| ||| ||   | | || ||| ||||| ||||| |  |||||||| ||||| || |    
T  26206138 gagattatacctgatggagctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaa 26206237  T
Q  475 atcaaatatgccaaccagacaatctagatttaat 508  Q
    | | | ||| |||||| |||| ||||||||||||    
T  26206238 accgactattccaacccgacagtctagatttaat 26206271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 419
Target Start/End: Complemental strand, 1104306 - 1104238
Alignment:
Q  351 ttattcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||||||||| |||  ||  |||||||| ||||| ||||||||||||||||||||||| ||||||||    
T  1104306 ttattcaataaagattcaatataagagattgtacctaatggagctttgaagaaggaaagagcatagaca 1104238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 282
Target Start/End: Complemental strand, 1104459 - 1104375
Alignment:
Q  198 actaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttc 282  Q
    |||||||||| |||||||||||||||||||| |||| | |||| |||||||| |  | ||||||| ||||||||| | |||||||    
T  1104459 actaacaaactccaacaccatttacctaacaaagcagtgttaatctccctcatctgcctaaccccaaaccctccagaatcctttc 1104375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 281
Target Start/End: Original strand, 21549487 - 21549559
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactccttt 281  Q
    |||||||||||||||||  | |||||||||||||||| |||| ||| | |||||||| ||||||| |||||||    
T  21549487 ccaacaccatttacctagtaaagcaatattaaactccttcaatctcctcacccccaaacctccatgctccttt 21549559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 375 - 426
Target Start/End: Original strand, 15674637 - 15674688
Alignment:
Q  375 gagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    ||||||||||||| |||||||||||||||||||||  |||||||| ||||||    
T  15674637 gagattatacctgctggagctttgaagaaggaaagtgcatagacaggcagag 15674688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 373 - 415
Target Start/End: Original strand, 13086346 - 13086388
Alignment:
Q  373 aagagattatacctgatggagctttgaagaaggaaagaccata 415  Q
    ||||||||||||||||||||||||| |||||||||||| ||||    
T  13086346 aagagattatacctgatggagctttaaagaaggaaagagcata 13086388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 374 - 419
Target Start/End: Complemental strand, 14686344 - 14686299
Alignment:
Q  374 agagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    ||||||||||||||| ||||| ||||||||||||||| ||||||||    
T  14686344 agagattatacctgacggagccttgaagaaggaaagagcatagaca 14686299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 374 - 419
Target Start/End: Complemental strand, 14843473 - 14843428
Alignment:
Q  374 agagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    ||||||||||||||| ||||||||||||||||||||  ||||||||    
T  14843473 agagattatacctgacggagctttgaagaaggaaagggcatagaca 14843428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 232
Target Start/End: Original strand, 18588902 - 18589011
Alignment:
Q  123 cccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatttac 222  Q
    ||||||||||||| || ||| |||||| ||||||| |||||||||||||| | | |||| ||  | || |  || |||||||||||||||||||| ||||    
T  18588902 cccccatcctccaacctcccgtcctcctcaccatatctagccaccaacactcgataccataacccgtctctatcaactaacaaacgccaacaccacttac 18589001  T
Q  223 ctaacagagc 232  Q
    | || |||||    
T  18589002 ccaatagagc 18589011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 373 - 410
Target Start/End: Original strand, 18589140 - 18589177
Alignment:
Q  373 aagagattatacctgatggagctttgaagaaggaaaga 410  Q
    |||||||||||||||||||||| |||||||||||||||    
T  18589140 aagagattatacctgatggagccttgaagaaggaaaga 18589177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 95 - 135
Target Start/End: Complemental strand, 5085641 - 5085601
Alignment:
Q  95 ctcccaccaccaacaagaacaacttcggcccccatcctcca 135  Q
    ||||| ||||||| |||||||||||||||||||||||||||    
T  5085641 ctcccgccaccaagaagaacaacttcggcccccatcctcca 5085601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 101 - 173
Target Start/End: Original strand, 15602855 - 15602927
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacacc 173  Q
    |||||||  ||||| ||| |||||||||||||||| || ||||||   ||||||||||||||| |||||||||    
T  15602855 ccaccaaatagaaccactccggcccccatcctccaacctcccatcacgcacaccatacctagcaaccaacacc 15602927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 280
Target Start/End: Original strand, 32186201 - 32186393
Alignment:
Q  88 tcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatc 187  Q
    |||||| ||||| ||||||| |||||  ||| ||||||||| |||||| || |||| || || ||| ||| || ||||||||||||||| |||| ||  |    
T  32186201 tcactacctccctccaccaagaagaagcactccggcccccaacctccaacctcccagccacctcactatatctcgccaccaacaccctataccaaaaccc 32186300  T
Q  188 atcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctt 280  Q
    | | |  ||||| |||||  |||||||||||||| | ||||  || | ||||||||| || |||  | | ||||||| |||| ||||||||||    
T  32186301 acctctatccaccaacaactgccaacaccatttatccaacaaggctaaattaaactctctaaactgcctcacccccagcccttcatactcctt 32186393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 372 - 502
Target Start/End: Complemental strand, 17577055 - 17576925
Alignment:
Q  372 gaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagagcaattatgatagacttgaggagaacgagacgaccaccgaaagaaa 471  Q
    ||||||||||||||||| ||||||||||| ||||||||   ||||||| | || ||| | | || ||| ||||| ||||  |  |||| ||| || ||||    
T  17577055 gaagagattatacctgacggagctttgaaaaaggaaagtgaatagacaggaagcgcagtcaagacagatttgagcagaatcaagcgactaccaaaggaaa 17576956  T
Q  472 ggaatcaaatatgccaaccagacaatctaga 502  Q
    || | | | ||||||||||||||||||||||    
T  17576955 ggtacctactatgccaaccagacaatctaga 17576925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 181
Target Start/End: Original strand, 26514245 - 26514335
Alignment:
Q  91 ctatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacacca 181  Q
    ||||||||| |||||||  ||||| ||| ||||||||| ||||||  | |||  ||||| ||||||||| |||||||||||| ||| ||||    
T  26514245 ctatctccctccaccaaatagaaccactccggcccccaacctccaaactccctgcctcctcaccataccgagccaccaacactctatacca 26514335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 374 - 419
Target Start/End: Original strand, 2923634 - 2923679
Alignment:
Q  374 agagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    ||||||||||||||| ||| ||||||||||||||| | ||||||||    
T  2923634 agagattatacctgacggaactttgaagaaggaaaaaacatagaca 2923679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 232
Target Start/End: Complemental strand, 7956254 - 7956149
Alignment:
Q  127 catcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaa 226  Q
    ||||||||| || ||| |||||| ||||||| |||||||||||||| | | |||| | | |||| |  || ||||||| ||||||||| || ||||| ||    
T  7956254 catcctccaacctcccgtcctcctcaccatatctagccaccaacactcgataccaaagaccatctctatcaactaacatacgccaacatcacttacccaa 7956155  T
Q  227 cagagc 232  Q
    ||||||    
T  7956154 cagagc 7956149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 381 - 426
Target Start/End: Complemental strand, 12687081 - 12687036
Alignment:
Q  381 atacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    ||||||||||||| |||||| ||||||||| |||||||| ||||||    
T  12687081 atacctgatggagttttgaaaaaggaaagagcatagacaggcagag 12687036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 19350752 - 19350793
Alignment:
Q  378 attatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    ||||||||||| ||||||||||||||||||||  ||||||||    
T  19350752 attatacctgacggagctttgaagaaggaaagtacatagaca 19350793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 24767065 - 24767004
Alignment:
Q  74 cccatcccggattctcactatctcccaccaccaacaagaacaacttcggcccccatcctcca 135  Q
    ||||||||  || ||||||||||||| ||||||  |||||||||| || |||||||||||||    
T  24767065 cccatccctaatcctcactatctccctccaccacgaagaacaactccgacccccatcctcca 24767004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 324
Target Start/End: Original strand, 26205978 - 26206095
Alignment:
Q  207 cgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaagaccatccta 306  Q
    |||||||||||||| | |||||  |  |||||||||||| |||| ||| | |||||||| || ||| |||||||| | ||||||||||    ||| | ||    
T  26205978 cgccaacaccatttccttaacaatgttatattaaactccttcaatctcctcacccccaaaccgccacactccttttttaaacaaacagtttgccaactta 26206077  T
Q  307 tccaagaaattttcctat 324  Q
     |||||||||||||||||    
T  26206078 accaagaaattttcctat 26206095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 408
Target Start/End: Complemental strand, 28575816 - 28575763
Alignment:
Q  355 tcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaa 408  Q
    |||||||| |||  || ||||| ||||||||||||| |||||||||||||||||    
T  28575816 tcaataaagattcaatagaagatattatacctgatgaagctttgaagaaggaaa 28575763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 272
Target Start/End: Original strand, 33805405 - 33805482
Alignment:
Q  195 tccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctcca 272  Q
    ||||||||||  | |||||||||||| |||| ||  |||| |||||||||| ||||| || | |||||||||||||||    
T  33805405 tccactaacatcctccaacaccatttccctagcaatgcaacattaaactccttcaacttcctgacccccaaccctcca 33805482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 47; Significance: 4e-17; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 153 - 419
Target Start/End: Original strand, 8187 - 8453
Alignment:
Q  153 ccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacc 252  Q
    ||||||||||| || || || ||| |||||||| || | |  ||||| ||||  |||||||||||||||||||||| |||| ||||||| ||| |||||     
T  8187 ccatacctagcaactaagacactataccacaaaccacctctgtccaccaacatccgccaacaccatttacctaacaaagcactattaaattccttcaact 8286  T
Q  253 tcataacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatccaagaaattttcctatgtccctcacaccccttccnnnnnnnntt 352  Q
       | |||||||| ||||||| ||||||| |  ||||||||     ||| |||||||||| |||||| |||||  ||||||| |||| ||        |     
T  8287 gtctcacccccaaacctccattctcctttgtggaacaaacaattttccagcctatccaagtaatttttctatgatcctcacatccctcccaaaaaaaatg 8386  T
Q  353 attcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    ||| |||||| |||  | |||||| |||||||||||||||||||||||||| |||||  ||||||||    
T  8387 attaaataaagattcaagggaagaaattatacctgatggagctttgaagaaagaaagggcatagaca 8453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 46; Significance: 2e-16; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 153 - 338
Target Start/End: Complemental strand, 4113 - 3928
Alignment:
Q  153 ccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacc 252  Q
    |||||||| || || || |||||| |||||||| |||| |  ||||| ||||  |||||||||||||| |||||||||||| ||||||||||| |||||     
T  4113 ccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacagagcactattaaactccttcaact 4014  T
Q  253 tcataacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatccaagaaattttcctatgtccctcacacccc 338  Q
       | |||||||| ||||||||||||||| |  |||||| ||    ||||||||||||   ||||||||||||  |||||| ||||    
T  4013 gtctcacccccaaacctccatactccttttttgaacaaatagttttccatcctatccagctaattttcctatgatcctcactcccc 3928  T

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Target: scaffold0131; HSP #2
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 3887 - 3832
Alignment:
Q  371 ggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    |||||| | |||||||||||||||||||||||| |||||  |||||||| ||||||    
T  3887 ggaagaaagtatacctgatggagctttgaagaaagaaagggcatagacaggcagag 3832  T

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Target: scaffold0002 (Bit Score: 46; Significance: 2e-16; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 153 - 338
Target Start/End: Complemental strand, 327692 - 327507
Alignment:
Q  153 ccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacc 252  Q
    |||||||| || || || |||||| |||||||| |||| |  ||||| ||||  |||||||||||||| ||||||| |||| ||||||||||| |||||     
T  327692 ccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccttcaact 327593  T
Q  253 tcataacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatccaagaaattttcctatgtccctcacacccc 338  Q
       | |||||||| |||||||||||||||||  |||||| ||    ||||||||||||   ||||||||||||  |||||| ||||    
T  327592 gtctcacccccaaacctccatactcctttctggaacaaatagttttccatcctatccagctaattttcctatgatcctcactcccc 327507  T

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Target: scaffold0002; HSP #2
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 338
Target Start/End: Complemental strand, 312238 - 312053
Alignment:
Q  153 ccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacc 252  Q
    |||||||| || || || |||||| |||||||| |||| |  ||||| ||||  |||||||||||||| ||||||| |||| ||||||||||| |||||     
T  312238 ccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccttcaact 312139  T
Q  253 tcataacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatccaagaaattttcctatgtccctcacacccc 338  Q
       | |||||||| ||||| |||||||||||  |||||| ||    ||||||||||||   ||||||||||||  |||||| ||||    
T  312138 gtctcacccccaaacctccgtactcctttctggaacaaatagttttccatcctatccagctaattttcctatgatcctcactcccc 312053  T

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Target: scaffold0016 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 251
Target Start/End: Original strand, 28344 - 28455
Alignment:
Q  140 cccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatatta 239  Q
    |||||||||| | ||||| || ||||||||||||||| ||||||||  |   | |||||| |||||||||||||||||||| |||||||  |||  ||||    
T  28344 cccatcctcctcgccatatcttgccaccaacaccctataccacaaactactcctctccaccaacaaacgccaacaccatttgcctaacaacgcagcatta 28443  T
Q  240 aactccctcaac 251  Q
    ||||||||||||    
T  28444 aactccctcaac 28455  T

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Target: scaffold0016; HSP #2
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 28575 - 28623
Alignment:
Q  371 ggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||| ||||||||||| ||||| ||||||||||||||| ||||||||    
T  28575 ggaagaaattatacctgacggagccttgaagaaggaaagagcatagaca 28623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 42; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 369 - 426
Target Start/End: Original strand, 8331 - 8388
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    |||||| ||||||||||||||||||||||||||||||||||  |||||||| ||||||    
T  8331 atggaatagattatacctgatggagctttgaagaaggaaagcgcatagacaggcagag 8388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 369 - 426
Target Start/End: Original strand, 13265 - 13322
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    |||||| ||||||||||||||||||||||||||||||||||  |||||||| ||||||    
T  13265 atggaatagattatacctgatggagctttgaagaaggaaagcgcatagacaggcagag 13322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 42; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 146 - 295
Target Start/End: Complemental strand, 34173 - 34024
Alignment:
Q  146 ctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactcc 245  Q
    |||| ||||||| || || |||| ||||||| |||| ||| |||| | ||| || ||||  |||||||||| ||||||||||| |||| |||||||||||    
T  34173 ctcctcaccatatctcgctaccagcaccctataccaaaaaccatctctctctaccaacattcgccaacaccttttacctaacaaagcactattaaactcc 34074  T
Q  246 ctcaacctcataacccccaaccctccatactcctttctcaaacaaacaga 295  Q
    |||| |    | || |||||||||||||||||||||   |||||||||||    
T  34073 ctcagctgtctcactcccaaccctccatactccttttgtaaacaaacaga 34024  T

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Target: scaffold0029 (Bit Score: 42; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 338
Target Start/End: Complemental strand, 134411 - 134226
Alignment:
Q  153 ccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacc 252  Q
    |||||||| || || || |||||| |||||||| |||| |  ||||| ||||  |||||||||||||| ||||||| |||| ||||||||||| |||||     
T  134411 ccatacctggcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccttcaact 134312  T
Q  253 tcataacccccaaccctccatactcctttctcaaacaaacagaagaccatcctatccaagaaattttcctatgtccctcacacccc 338  Q
       | |||||||| ||||| |||||||||||  |||||| ||    ||||||||||||   ||||||||||||  |||||| ||||    
T  134311 gtctcacccccaaacctccgtactcctttctggaacaaatagttttccatcctatccagctaattttcctatgatcctcactcccc 134226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 42; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 369 - 426
Target Start/End: Original strand, 182914 - 182971
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgcagag 426  Q
    |||||||||||||||||| ||||||||||||||||||||||  |||||||| ||||||    
T  182914 atggaagagattatacctaatggagctttgaagaaggaaagtgcatagacaggcagag 182971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 41; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 419
Target Start/End: Complemental strand, 15016 - 14952
Alignment:
Q  355 tcaataaatattttatggaagagattatacctgatggagctttgaagaaggaaagaccatagaca 419  Q
    |||||||| |||  ||||||||||||||||||| |||| ||||||||||||||||| ||||||||    
T  15016 tcaataaagattcaatggaagagattatacctggtggatctttgaagaaggaaagagcatagaca 14952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112; HSP #2
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 281
Target Start/End: Complemental strand, 15160 - 15090
Alignment:
Q  211 aacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactccttt 281  Q
    |||||||||||||||  | |||||||||||| ||| ||||| || ||||||||||  |||||| |||||||    
T  15160 aacaccatttacctagtaaagcaatattaaaatccttcaacttcctaacccccaaaactccatgctccttt 15090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 362 - 409
Target Start/End: Complemental strand, 1148 - 1101
Alignment:
Q  362 atattttatggaagagattatacctgatggagctttgaagaaggaaag 409  Q
    ||||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  1148 atattatatagaagagattatacctgatggagccttgaagaaggaaag 1101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 280
Target Start/End: Complemental strand, 794 - 715
Alignment:
Q  201 aacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctt 280  Q
    |||| |||||||||||| || ||||| ||||||| |||||||||||||| |||| | |||||||| ||||| | ||||||    
T  794 aacatacgccaacaccacttccctaatagagcaacattaaactccctcatcctcctgacccccaaacctccttcctcctt 715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 35; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 281
Target Start/End: Original strand, 17770 - 17856
Alignment:
Q  195 tccactaacaaacgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactccttt 281  Q
    ||||||||||  | |||||||||||| |||| ||  |||| |||||||||| ||||| || | ||||||||||||||| ||||||||    
T  17770 tccactaacatccaccaacaccatttccctagcaatgcaacattaaactccttcaacttcctgacccccaaccctccaaactccttt 17856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 35; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 423
Target Start/End: Original strand, 67879 - 67933
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccatagacatgca 423  Q
    |||||||||||||||||| |  |||||||||||||||||| | ||||||||||||    
T  67879 atggaagagattataccttacagagctttgaagaaggaaaaatcatagacatgca 67933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 181
Target Start/End: Original strand, 67606 - 67691
Alignment:
Q  96 tcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacacca 181  Q
    |||||||||||| |||||| ||| | ||||||| |||||| || |||  ||||| ||||||||||||  | |||||||||| ||||    
T  67606 tcccaccaccaagaagaaccactccagcccccaacctccaacctccctgcctcctcaccatacctagaaatcaacaccctatacca 67691  T

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Target: scaffold0048 (Bit Score: 34; Significance: 0.000000002; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 272
Target Start/End: Complemental strand, 63802 - 63737
Alignment:
Q  207 cgccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctcca 272  Q
    |||||||||||||| |||| || ||| | ||||||||||||||||  | |||||||||||||||||    
T  63802 cgccaacaccatttccctagcaaagctaaattaaactccctcaactgcctaacccccaaccctcca 63737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 369 - 415
Target Start/End: Complemental strand, 63641 - 63595
Alignment:
Q  369 atggaagagattatacctgatggagctttgaagaaggaaagaccata 415  Q
    |||||||||||||||||||| | ||| ||||||||||||||| ||||    
T  63641 atggaagagattatacctgaagaagccttgaagaaggaaagagcata 63595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 32; Significance: 0.00000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 296
Target Start/End: Complemental strand, 3080 - 2993
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctccatactcctttctcaaacaaacagaa 296  Q
    |||||||||||||||||| | || || ||||||  | ||||||  | |||||||||||||||| | |||||||  |||||||||||||    
T  3080 ccaacaccatttacctaataaagaaaaattaaaagctctcaactgcctaacccccaaccctccgtcctcctttggcaaacaaacagaa 2993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 271
Target Start/End: Original strand, 12464 - 12526
Alignment:
Q  209 ccaacaccatttacctaacagagcaatattaaactccctcaacctcataacccccaaccctcc 271  Q
    |||||||||||||||||||| ||| | || |||||||||||||| | ||||||| || |||||    
T  12464 ccaacaccatttacctaacacagccacatgaaactccctcaaccgcctaacccctaaacctcc 12526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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