View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11867_low_37 (Length: 250)
Name: NF11867_low_37
Description: NF11867
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11867_low_37 |
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Alignment Details
Target: chr1 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 47456942 - 47456700
Alignment:
| Q |
1 |
cgaattataaattcatggttaccttgagttcctcaatgtcatctaaattatttataggtacaagcaagcaggtcatcaacatcttagctttgttctgcac |
100 |
Q |
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| T |
47456942 |
cgaattataaattcatggttaccttgagttcctcaatgtcatctaaattatttataggtacaagcaagcaggtcatcaacatcttagctttgttctgcac |
47456843 |
T |
|
| Q |
101 |
cctcatataaacaacatgaactactgcagaatgggagaatcgttgctggaacaagaaagagtctatcattttgt-ttttaagtctttggtccttgtttta |
199 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
47456842 |
cctcacataaacaacatgaactactgcagaatgggagaatcgttgctggaacaagaaagagtctatcattttgttttttaagtctttggtccttgtttta |
47456743 |
T |
|
| Q |
200 |
tcccatataaagctatcttcagcctatacaccatgtctgtgct |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||| |
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| T |
47456742 |
tcccatataaagctatcttcagcctatacaccatgtctttgct |
47456700 |
T |
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