View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11867_low_43 (Length: 216)

Name: NF11867_low_43
Description: NF11867
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11867_low_43
NF11867_low_43
[»] chr7 (15 HSPs)
chr7 (15-201)||(39931105-39931292)
chr7 (45-201)||(36363991-36364147)
chr7 (87-173)||(17721152-17721238)
chr7 (90-190)||(31423122-31423222)
chr7 (87-190)||(4937648-4937751)
chr7 (87-173)||(234975-235061)
chr7 (87-173)||(47877500-47877585)
chr7 (90-190)||(37255278-37255378)
chr7 (87-173)||(11276785-11276871)
chr7 (101-181)||(25018847-25018927)
chr7 (87-173)||(29968491-29968577)
chr7 (109-172)||(17504097-17504160)
chr7 (109-172)||(17549054-17549117)
chr7 (121-174)||(6335940-6335993)
chr7 (101-181)||(11341327-11341407)
[»] chr4 (21 HSPs)
chr4 (90-181)||(55725235-55725326)
chr4 (90-184)||(11586724-11586818)
chr4 (90-184)||(48312614-48312708)
chr4 (87-190)||(1828060-1828163)
chr4 (88-184)||(5789618-5789714)
chr4 (87-190)||(23642111-23642214)
chr4 (87-190)||(23647769-23647872)
chr4 (87-190)||(47419321-47419424)
chr4 (87-173)||(15740737-15740823)
chr4 (87-173)||(19755784-19755870)
chr4 (87-173)||(19783936-19784022)
chr4 (90-177)||(54482692-54482779)
chr4 (87-184)||(46146194-46146291)
chr4 (101-184)||(19162703-19162786)
chr4 (87-134)||(19735311-19735358)
chr4 (91-184)||(36183058-36183151)
chr4 (95-135)||(23657822-23657862)
chr4 (101-184)||(40688597-40688680)
chr4 (101-185)||(7099013-7099097)
chr4 (95-135)||(8935599-8935639)
chr4 (121-173)||(54685161-54685213)
[»] scaffold1350 (1 HSPs)
scaffold1350 (84-184)||(58-158)
[»] chr2 (10 HSPs)
chr2 (33-177)||(37445556-37445700)
chr2 (91-185)||(14440265-14440359)
chr2 (87-173)||(28253237-28253323)
chr2 (90-184)||(33515733-33515827)
chr2 (101-185)||(43310790-43310874)
chr2 (140-184)||(12646091-12646135)
chr2 (101-185)||(26146746-26146830)
chr2 (101-184)||(13416202-13416285)
chr2 (90-135)||(12646056-12646101)
chr2 (73-135)||(15018180-15018242)
[»] chr8 (15 HSPs)
chr8 (70-169)||(38046858-38046957)
chr8 (87-173)||(9923118-9923204)
chr8 (87-185)||(20824816-20824914)
chr8 (87-190)||(7924903-7925006)
chr8 (87-190)||(8300320-8300423)
chr8 (90-177)||(13879020-13879107)
chr8 (87-173)||(172576-172662)
chr8 (90-184)||(25090907-25091001)
chr8 (87-173)||(41664905-41664991)
chr8 (33-135)||(43283248-43283350)
chr8 (140-185)||(43271007-43271052)
chr8 (101-181)||(36492912-36492992)
chr8 (101-184)||(4310368-4310451)
chr8 (91-184)||(37165647-37165740)
chr8 (90-190)||(42177075-42177172)
[»] chr3 (14 HSPs)
chr3 (90-185)||(19891197-19891292)
chr3 (90-184)||(48569565-48569659)
chr3 (87-190)||(2364794-2364897)
chr3 (74-184)||(962689-962799)
chr3 (93-185)||(12341780-12341872)
chr3 (87-190)||(10323091-10323194)
chr3 (87-173)||(19919766-19919852)
chr3 (87-173)||(34332352-34332438)
chr3 (87-184)||(3141368-3141465)
chr3 (101-181)||(52250653-52250733)
chr3 (101-184)||(8130482-8130565)
chr3 (87-184)||(16179464-16179561)
chr3 (84-185)||(20531576-20531677)
chr3 (120-181)||(6825372-6825433)
[»] chr6 (20 HSPs)
chr6 (87-185)||(17605859-17605957)
chr6 (84-157)||(10922067-10922140)
chr6 (88-181)||(18682103-18682196)
chr6 (87-184)||(13938236-13938333)
chr6 (90-177)||(10576783-10576870)
chr6 (90-173)||(14372528-14372611)
chr6 (87-173)||(2554123-2554209)
chr6 (93-185)||(17577243-17577335)
chr6 (33-120)||(5041980-5042066)
chr6 (140-185)||(21629647-21629692)
chr6 (95-135)||(5085601-5085641)
chr6 (101-173)||(15602855-15602927)
chr6 (140-184)||(15956517-15956561)
chr6 (91-181)||(26514245-26514335)
chr6 (123-172)||(18588902-18588951)
chr6 (74-135)||(24767004-24767065)
chr6 (88-181)||(32186201-32186294)
chr6 (95-135)||(503107-503147)
chr6 (95-135)||(8264748-8264788)
chr6 (141-173)||(24766951-24766983)
[»] chr5 (23 HSPs)
chr5 (87-185)||(8299707-8299805)
chr5 (87-173)||(28535212-28535298)
chr5 (74-184)||(33170162-33170272)
chr5 (87-181)||(42928648-42928742)
chr5 (87-190)||(42514237-42514340)
chr5 (87-173)||(31642028-31642114)
chr5 (87-166)||(30731858-30731937)
chr5 (87-173)||(27116710-27116796)
chr5 (95-177)||(27796009-27796091)
chr5 (87-173)||(35983328-35983414)
chr5 (87-173)||(23238900-23238986)
chr5 (109-185)||(10780740-10780816)
chr5 (87-135)||(27165525-27165573)
chr5 (101-181)||(41590627-41590707)
chr5 (101-184)||(36256309-36256392)
chr5 (87-165)||(12825716-12825794)
chr5 (140-185)||(25856964-25857009)
chr5 (101-181)||(4297838-4297918)
chr5 (95-181)||(15862206-15862292)
chr5 (73-135)||(22094825-22094887)
chr5 (95-181)||(42039234-42039320)
chr5 (140-173)||(27165502-27165535)
chr5 (87-135)||(25856999-25857047)
[»] scaffold0034 (1 HSPs)
scaffold0034 (87-190)||(105363-105466)
[»] chr1 (4 HSPs)
chr1 (87-190)||(6051120-6051223)
chr1 (87-173)||(47622614-47622700)
chr1 (140-190)||(35541604-35541654)
chr1 (87-135)||(35541566-35541614)
[»] scaffold0472 (1 HSPs)
scaffold0472 (87-190)||(3769-3872)
[»] scaffold0026 (1 HSPs)
scaffold0026 (96-181)||(67606-67691)


Alignment Details
Target: chr7 (Bit Score: 160; Significance: 2e-85; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 15 - 201
Target Start/End: Complemental strand, 39931292 - 39931105
Alignment:
Q  15 tggacatcacaccaaaaagacacacacgacgcaaaccacccatcactcc-taccttcaaccccatcccggattctcactatctcccaccaccaacaagaa 113  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  39931292 tggacatcataccaaaaagacacacacgacacaaaccacccatcactccctaccttcaaccccatcccgaattctcactatctcccaccaccaacaagaa 39931193  T
Q  114 caacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccacta 201  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39931192 caactccggcccccatcctccaaccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccacta 39931105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 45 - 201
Target Start/End: Original strand, 36363991 - 36364147
Alignment:
Q  45 gcaaaccacccatcactcctaccttcaaccccatcccggattctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccat 144  Q
    ||||||||||||||||  |||||| | |||||||||||||||||||||||||||| ||| ||| ||||||||||||||||| ||||||||| |     ||    
T  36363991 gcaaaccacccatcaccactacctcctaccccatcccggattctcactatctccctccatcaagaagaacaacttcggccctcatcctccaactatttat 36364090  T
Q  145 cctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccacta 201  Q
    |||||||||| || ||||||||||||||||||| || |||| ||| |||||||||||    
T  36364091 cctccacaccttaactagccaccaacaccctacgccccaaaccattaccctccacta 36364147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 173
Target Start/End: Original strand, 17721152 - 17721238
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacacc 173  Q
    ||||||||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||| ||||||||||||||||||||||||||    
T  17721152 ctcactatctccctccaccatgaagaacaactccggcccccatcctccaaacctccatccgccacaccatacctagccaccaacacc 17721238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 90 - 190
Target Start/End: Original strand, 31423122 - 31423222
Alignment:
Q  90 actatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcat 189  Q
    |||||||||| | ||||  |||||||||| ||||||||||||||||  |  |||||| ||||||||| |||||||||||||||||||| ||||||| |||    
T  31423122 actatctccctcaaccacgaagaacaactccggcccccatcctccaaaccaccatccgccacaccatgcctagccaccaacaccctacgccacaaaccat 31423221  T
Q  190 c 190  Q
    |    
T  31423222 c 31423222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 190
Target Start/End: Complemental strand, 4937751 - 4937648
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||||||||||||||||||||||| |||||| | | |||||||     
T  4937751 ctcacaatctccctccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaag 4937652  T
Q  187 catc 190  Q
    ||||    
T  4937651 catc 4937648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 87 - 173
Target Start/End: Complemental strand, 235061 - 234975
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacacc 173  Q
    ||||||||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||| ||||||||||||||||||| ||||||    
T  235061 ctcactatctccctccaccacgaagaacaactccggcccccatcctccaaacctccatccgccacaccatacctagccactaacacc 234975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 173
Target Start/End: Original strand, 47877500 - 47877585
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacacc 173  Q
    ||||||||||||| ||||||  |||||||||| ||||||| ||||||||  |  |||||| ||||||||||||||||||||||||||    
T  47877500 ctcactatctccctccaccacgaagaacaactccggcccc-atcctccaaacctccatccgccacaccatacctagccaccaacacc 47877585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 190
Target Start/End: Original strand, 37255278 - 37255378
Alignment:
Q  90 actatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcat 189  Q
    |||||||||| ||| ||  | |||||||| | ||||||||||||||  |  |||||| |||||||||||||||||||||||||||||| || |||| |||    
T  37255278 actatctccctccatcacgatgaacaactccagcccccatcctccaaaccaccatccgccacaccatacctagccaccaacaccctacgccccaaaccat 37255377  T
Q  190 c 190  Q
    |    
T  37255378 c 37255378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 173
Target Start/End: Complemental strand, 11276871 - 11276785
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacacc 173  Q
    ||||||||||||| ||||||  | |||||||| ||| ||||||||||||  |  |||||| ||||||||||||||||||| ||||||    
T  11276871 ctcactatctccctccaccacgacgaacaactccgggccccatcctccaaacctccatccgccacaccatacctagccactaacacc 11276785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 25018927 - 25018847
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacacca 181  Q
    ||||||| |||||| |||||| |||||| |||||| || |||| ||||| ||||||| || ||||||||||||||| ||||    
T  25018927 ccaccaagaagaaccacttcgacccccaacctccaacctcccagcctcctcaccatatcttgccaccaacaccctatacca 25018847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 173
Target Start/End: Original strand, 29968491 - 29968577
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacacc 173  Q
    ||||||||||||| ||||||  | |||||||| |||||| |||||||||  |  |||||| |||| |||||||||||||| ||||||    
T  29968491 ctcactatctccctccaccacgacgaacaactccggcccgcatcctccaaacctccatccgccacgccatacctagccactaacacc 29968577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 172
Target Start/End: Complemental strand, 17504160 - 17504097
Alignment:
Q  109 aagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacac 172  Q
    |||||| ||| |||||||||||||||| || |||||||||| |||| || || |||||||||||    
T  17504160 aagaaccactccggcccccatcctccaacctcccatcctcctcaccgtatctcgccaccaacac 17504097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 172
Target Start/End: Original strand, 17549054 - 17549117
Alignment:
Q  109 aagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacac 172  Q
    |||||| ||| |||||||||||||||| || |||||||||| |||| || || |||||||||||    
T  17549054 aagaaccactccggcccccatcctccaacctcccatcctcctcaccgtatctcgccaccaacac 17549117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 174
Target Start/End: Complemental strand, 6335993 - 6335940
Alignment:
Q  121 ggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccc 174  Q
    ||||||||||||||| || ||||||   ||||||||||||||| ||||||||||    
T  6335993 ggcccccatcctccaacctcccatcgcgcacaccatacctagcaaccaacaccc 6335940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 11341327 - 11341407
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacacca 181  Q
    ||||||| | |||||||| ||||||||  |||||| || |||  ||||| |||||||||||||  ||||||||||| ||||    
T  11341327 ccaccaaaaggaacaactccggcccccgacctccaacctccctgcctcctcaccatacctagcagccaacaccctatacca 11341407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 9e-26; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 55725326 - 55725235
Alignment:
Q  90 actatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacacca 181  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||  |  |||||||||||||||||||||||||||||||||||| ||||    
T  55725326 actatctccctccaccaagaagaacaactccggcccccatcctccaaaccaccatcctccacaccatacctagccaccaacaccctatacca 55725235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 11586818 - 11586724
Alignment:
Q  90 actatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaa 184  Q
    |||||||||| ||||||| ||||||||||||||||||||| |||||  |  |||||| ||||||||||||||||||| |||||| ||||||||||    
T  11586818 actatctccctccaccaagaagaacaacttcggcccccattctccaaacctccatccgccacaccatacctagccactaacaccttacaccacaa 11586724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 48312614 - 48312708
Alignment:
Q  90 actatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaa 184  Q
    |||||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||| |||||||||||||||||||||||||||||| ||||||    
T  48312614 actatctccctccaccacgaagaacaactccggcccccatcctccaaaccaccatccgccacaccatacctagccaccaacaccctacgccacaa 48312708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 87 - 190
Target Start/End: Complemental strand, 1828163 - 1828060
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||||||||||| ||||||| |||||||||| |||||||||||| |||  |  |||||||||||||||||||||||||| |||||| | | |||||||     
T  1828163 ctcactatctcccgccaccaagaagaacaactccggcccccatccgccaaacctccatcctccacaccatacctagccactaacaccttcctccacaaaa 1828064  T
Q  187 catc 190  Q
    ||||    
T  1828063 catc 1828060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 88 - 184
Target Start/End: Complemental strand, 5789714 - 5789618
Alignment:
Q  88 tcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaa 184  Q
    |||| ||||||| ||||||| |||||||||| ||||||||||||||||  |  ||| |||||||||||||||||||||| |||||| ||| ||||||    
T  5789714 tcacaatctcccgccaccaagaagaacaactccggcccccatcctccaaacctccaccctccacaccatacctagccactaacaccttacgccacaa 5789618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 190
Target Start/End: Complemental strand, 23642214 - 23642111
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||||||||||||||||||||||| |||||| | | |||||||     
T  23642214 ctcacaatctccctccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaag 23642115  T
Q  187 catc 190  Q
    ||||    
T  23642114 catc 23642111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 190
Target Start/End: Complemental strand, 23647872 - 23647769
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||||||||||||||||||||||| |||||| | | |||||||     
T  23647872 ctcacaatctccctccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaag 23647773  T
Q  187 catc 190  Q
    ||||    
T  23647772 catc 23647769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 190
Target Start/End: Original strand, 47419321 - 47419424
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||||||||||||||||||||||| |||||| | | |||||||     
T  47419321 ctcacaatctccctccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaag 47419420  T
Q  187 catc 190  Q
    ||||    
T  47419421 catc 47419424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 87 - 173
Target Start/End: Original strand, 15740737 - 15740823
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacacc 173  Q
    ||||||||||||| ||||||  |||||||||| |||||||||||| |||  |  |||||||||||||||||||||||||| ||||||    
T  15740737 ctcactatctcccgccaccatgaagaacaactccggcccccatccgccaaacctccatcctccacaccatacctagccactaacacc 15740823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 87 - 173
Target Start/End: Original strand, 19755784 - 19755870
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacacc 173  Q
    ||||||||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||| ||||||||||||||||||| ||||||    
T  19755784 ctcactatctccctccaccacgaagaacaactccggcccccatcctccaaacctccatccgccacaccatacctagccactaacacc 19755870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 87 - 173
Target Start/End: Complemental strand, 19784022 - 19783936
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacacc 173  Q
    ||||||||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||| ||||||||||||||||||| ||||||    
T  19784022 ctcactatctccctccaccacgaagaacaactccggcccccatcctccaaacctccatccgccacaccatacctagccactaacacc 19783936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 54482779 - 54482692
Alignment:
Q  90 actatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctac 177  Q
    |||||||||| ||||||  |||||||||| || |||||||||||||  |  |||||  ||||||||||||||||||||||||||||||    
T  54482779 actatctccctccaccacgaagaacaactccgacccccatcctccaaaccaccatctgccacaccatacctagccaccaacaccctac 54482692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 46146194 - 46146291
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaa 184  Q
    ||||||||||||| ||||||| | |||||||| |||||||||| |||||  |  |||||| |  ||||||| ||||||||||||||||||| ||||||    
T  46146194 ctcactatctcccgccaccaagatgaacaactccggcccccattctccaaaccaccatccgctgcaccatatctagccaccaacaccctacgccacaa 46146291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 184
Target Start/End: Complemental strand, 19162786 - 19162703
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaa 184  Q
    ||||||| |||||| ||| |||||||||||||||| || ||| |||   |||||||| ||||| |||||||||||| |||||||    
T  19162786 ccaccaaaaagaaccactccggcccccatcctccaacctcccgtccctaacaccatatctagcaaccaacaccctataccacaa 19162703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 134
Target Start/End: Complemental strand, 19735358 - 19735311
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctcc 134  Q
    ||||||||||||| ||||||| |||||||||| |||||||||||||||    
T  19735358 ctcactatctcccgccaccaagaagaacaactccggcccccatcctcc 19735311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 184
Target Start/End: Original strand, 36183058 - 36183151
Alignment:
Q  91 ctatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaa 184  Q
    ||||||||| |||||||  ||||  ||| ||||||||| |||||| ||||||||||||| ||||||| || ||||| |  |||||| |||||||    
T  36183058 ctatctccctccaccaagtagaaacactccggcccccaacctccaaccgcccatcctcctcaccatatcttgccacaagtaccctataccacaa 36183151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 135
Target Start/End: Original strand, 23657822 - 23657862
Alignment:
Q  95 ctcccaccaccaacaagaacaacttcggcccccatcctcca 135  Q
    ||||| ||||||| |||||||||||||||||||||||||||    
T  23657822 ctcccgccaccaagaagaacaacttcggcccccatcctcca 23657862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 40688597 - 40688680
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaa 184  Q
    ||||||| |||||| ||| |||||||||||||||| || |||||||   |||||||| ||| | |||||||||| | |||||||    
T  40688597 ccaccaaaaagaaccactccggcccccatcctccaacctcccatccctaacaccatatctaccaaccaacacccgataccacaa 40688680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 185
Target Start/End: Original strand, 7099013 - 7099097
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaa 185  Q
    |||||||  ||||| ||| |||||||||||||||| || | |||||||| ||||||| ||||| | ||| |||| | ||||||||    
T  7099013 ccaccaaatagaaccactccggcccccatcctccaacctctcatcctcctcaccatatctagctatcaaaacccgataccacaaa 7099097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 135
Target Start/End: Original strand, 8935599 - 8935639
Alignment:
Q  95 ctcccaccaccaacaagaacaacttcggcccccatcctcca 135  Q
    ||||| ||||||| |||||||||| ||||||||||||||||    
T  8935599 ctcccgccaccaagaagaacaactccggcccccatcctcca 8935639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 173
Target Start/End: Original strand, 54685161 - 54685213
Alignment:
Q  121 ggcccccatcctccagccgcccatcctccacaccatacctagccaccaacacc 173  Q
    ||||||||||||||| || ||||||   ||||||||||||||| |||||||||    
T  54685161 ggcccccatcctccaacctcccatcacgcacaccatacctagcaaccaacacc 54685213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 84 - 184
Target Start/End: Original strand, 58 - 158
Alignment:
Q  84 attctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccaca 183  Q
    ||||| |||||||||| ||||||| |||| ||||||||||||||||||||||  |  ||||||||||||||||||||| ||||||||||| ||| |||||    
T  58 attctgactatctccctccaccaagaagagcaacttcggcccccatcctccaaaccaccatcctccacaccatacctaaccaccaacaccttacgccaca 157  T
Q  184 a 184  Q
    |    
T  158 a 158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 6e-24; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 33 - 177
Target Start/End: Original strand, 37445556 - 37445700
Alignment:
Q  33 gacacacacgacgcaaaccacccatcactcctaccttcaaccccatcccggattctcactatctcccaccaccaacaagaacaacttcggcccccatcct 132  Q
    |||||||||  || ||||||||||||||  ||||||   | ||| ||||| ||||||||   ||||||||||||  |||||||||| |||||||||||||    
T  37445556 gacacacactccgtaaaccacccatcaccactacctcttatcccgtcccgaattctcacacactcccaccaccacgaagaacaactccggcccccatcct 37445655  T
Q  133 ccagccgcccatcctccacaccatacctagccaccaacaccctac 177  Q
    ||| || ||  |||||| |||||||||||||||||||||||||||    
T  37445656 ccaacctcctgtcctccgcaccatacctagccaccaacaccctac 37445700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 91 - 185
Target Start/End: Original strand, 14440265 - 14440359
Alignment:
Q  91 ctatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaa 185  Q
    ||||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||| ||| |||||||||||||| |||||||||||||||||||    
T  14440265 ctatctccctccaccacgaagaacaactccggcccccatcctccaaaccaccatccgccataccatacctagccaacaacaccctacaccacaaa 14440359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 87 - 173
Target Start/End: Original strand, 28253237 - 28253323
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacacc 173  Q
    ||||||||||||| ||||||| |||||||||| ||||||||||||||||  |  |||||| |||||||||||||||||  |||||||    
T  28253237 ctcactatctccctccaccaagaagaacaactccggcccccatcctccaaacctccatccgccacaccatacctagccctcaacacc 28253323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 33515827 - 33515733
Alignment:
Q  90 actatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaa 184  Q
    |||||||||| ||||||  ||||||| || || |||||||||||||  |  |||||| |||||||||||||||||||||||||||||| ||||||    
T  33515827 actatctccctccaccacgaagaacagctccgacccccatcctccaaaccaccatccgccacaccatacctagccaccaacaccctacgccacaa 33515733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 185
Target Start/End: Original strand, 43310790 - 43310874
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaa 185  Q
    ||||||| |||||| ||| ||||||||| |||||| || |||||||||| | ||||| || ||||||||||||||| ||||||||    
T  43310790 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcgccatatctcgccaccaacaccctataccacaaa 43310874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 12646091 - 12646135
Alignment:
Q  140 cccatcctccacaccatacctagccaccaacaccctacaccacaa 184  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||    
T  12646091 cccatcctccacaccttacctagccaccaacaccctataccacaa 12646135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 185
Target Start/End: Original strand, 26146746 - 26146830
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaa 185  Q
    ||||||| || ||| ||| ||||||||| |||||| || |||||||||| | ||||| || ||||||||||||||| ||||||||    
T  26146746 ccaccaagaataaccactccggcccccaacctccaacctcccatcctcctcgccatatctcgccaccaacaccctataccacaaa 26146830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 13416202 - 13416285
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaa 184  Q
    |||||||  ||||| ||| |||||||||||||||| || ||||||   ||||||||||||||| |||||||||| | |||||||    
T  13416202 ccaccaaatagaaccactccggcccccatcctccaacctcccatcacgcacaccatacctagcaaccaacacccgataccacaa 13416285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 12646056 - 12646101
Alignment:
Q  90 actatctcccaccaccaacaagaacaacttcggcccccatcctcca 135  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||    
T  12646056 actatctccctccaccaagaagaacaactccggcccccatcctcca 12646101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 135
Target Start/End: Original strand, 15018180 - 15018242
Alignment:
Q  73 ccccatcccggattctcactatctcccaccaccaacaagaacaacttcggcccccatcctcca 135  Q
    |||||||||  || ||| ||| ||||| ||||||| |||||||||||||||||||| ||||||    
T  15018180 ccccatccctaatcctccctacctcccgccaccaagaagaacaacttcggcccccaacctcca 15018242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 2e-23; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 70 - 169
Target Start/End: Original strand, 38046858 - 38046957
Alignment:
Q  70 caaccccatcccggattctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaa 169  Q
    |||| ||| |||| ||||| |||||||||| ||| ||  ||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||    
T  38046858 caacaccaccccgaattctaactatctccctccatcacgaagaacaacttcggcccccatcctccaacctcccatcctccacaccatacctagcaaccaa 38046957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 173
Target Start/End: Original strand, 9923118 - 9923204
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacacc 173  Q
    ||||||||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||| ||||||||||||||||||||||||||    
T  9923118 ctcactatctccctccaccatgaagaacaactccggcccccatcctccaaacctccatccgccacaccatacctagccaccaacacc 9923204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 185
Target Start/End: Original strand, 20824816 - 20824914
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaa 185  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  ||||||||||| ||||||||||||| ||||||||||| |||||||    
T  20824816 ctcacaatctccctccaccacaaagaacaactccggcccccatcctccaaaccaccatcctccacgccatacctagccaacaacaccctactccacaaa 20824914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 190
Target Start/End: Original strand, 7924903 - 7925006
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||||||||||||||||||||||| |||||| | | |||||||     
T  7924903 ctcacaatctccctccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaag 7925002  T
Q  187 catc 190  Q
    ||||    
T  7925003 catc 7925006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 190
Target Start/End: Original strand, 8300320 - 8300423
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||||||||||||||||||||||| |||||| | | |||||||     
T  8300320 ctcacgatctccctccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaag 8300419  T
Q  187 catc 190  Q
    ||||    
T  8300420 catc 8300423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 13879107 - 13879020
Alignment:
Q  90 actatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctac 177  Q
    |||||||||| ||||||  ||||||||||  |||||||||||||||  |  |||||| ||||||||||||||||||||||||||||||    
T  13879107 actatctccctccaccacgaagaacaactctggcccccatcctccaaaccaccatccgccacaccatacctagccaccaacaccctac 13879020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 87 - 173
Target Start/End: Complemental strand, 172662 - 172576
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacacc 173  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||||||||||||||||||||||| ||||||    
T  172662 ctcacgatctccctccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacc 172576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 25090907 - 25091001
Alignment:
Q  90 actatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaa 184  Q
    |||||||||| ||||||  ||||||| || ||||||||||||||||  |  |||||| ||||||||||| |||||||||||||||||| ||||||    
T  25090907 actatctccctccaccacgaagaacagctccggcccccatcctccaaaccaccatccgccacaccatacatagccaccaacaccctacgccacaa 25091001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 173
Target Start/End: Complemental strand, 41664991 - 41664905
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacacc 173  Q
    ||||||||||||  ||||||  |||||||||| ||||||||||||||||  |  |||||| ||||||||||||||||||| ||||||    
T  41664991 ctcactatctccatccaccacgaagaacaactccggcccccatcctccaaacctccatccgccacaccatacctagccactaacacc 41664905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 135
Target Start/End: Complemental strand, 43283350 - 43283248
Alignment:
Q  33 gacacacacgacgcaaaccacccatcactcctaccttcaaccccatcccggattctcactatctcccaccaccaacaagaacaacttcggcccccatcct 132  Q
    ||||||||||| |||||||||| ||||   ||| |  ||||| ||||||  |||||||||||||||| |||||||||||||||||| ||||  |||||||    
T  43283350 gacacacacgaagcaaaccacctatcataactaacaccaacctcatcccaaattctcactatctccctccaccaacaagaacaactccggcttccatcct 43283251  T
Q  133 cca 135  Q
    |||    
T  43283250 cca 43283248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 43271007 - 43271052
Alignment:
Q  140 cccatcctccacaccatacctagccaccaacaccctacaccacaaa 185  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||    
T  43271007 cccatccgccacaccatacctagccatcaacaccctacaccacaaa 43271052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 36492912 - 36492992
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacacca 181  Q
    ||||||| ||||||  || ||||||||| || ||| || |||||||||| |||||||||| ||||||||||||||| ||||    
T  36492912 ccaccaagaagaacctctccggcccccaaccgccaacctcccatcctcctcaccatacctcgccaccaacaccctatacca 36492992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 184
Target Start/End: Complemental strand, 4310451 - 4310368
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaa 184  Q
    ||||||| |||||| ||| |||||||||||||||| || |||||||   ||| |||| ||||| |||||||||||| |||||||    
T  4310451 ccaccaaaaagaaccactccggcccccatcctccaacctcccatccctaacatcatatctagcaaccaacaccctataccacaa 4310368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 184
Target Start/End: Complemental strand, 37165740 - 37165647
Alignment:
Q  91 ctatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaa 184  Q
    ||||||||| |||||||  ||||  ||| ||||||||| |||||| ||||||||||||| | ||||| || |||||||  |||||| |||||||    
T  37165740 ctatctccctccaccaagtagaaacactccggcccccaacctccaaccgcccatcctcctcgccatatctcgccaccagtaccctataccacaa 37165647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 190
Target Start/End: Complemental strand, 42177172 - 42177075
Alignment:
Q  90 actatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcat 189  Q
    |||||||||| ||||||  ||||||||||||||||| |||||||||  |  |||||  ||     ||||||||||||||||||||||| ||||||| |||    
T  42177172 actatctccctccaccacgaagaacaacttcggcccgcatcctccaaaccaccatctgcc---tgatacctagccaccaacaccctacgccacaaaccat 42177076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 2e-23; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 90 - 185
Target Start/End: Original strand, 19891197 - 19891292
Alignment:
Q  90 actatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaa 185  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||  |  |||||  |||||||||||||||||||||||||||||| |||||||    
T  19891197 actatctccctccaccacgaagaacaacttcggcccccatcctccaaaccaccatctgccacaccatacctagccaccaacaccctacgccacaaa 19891292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 48569659 - 48569565
Alignment:
Q  90 actatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaa 184  Q
    |||||||||| | ||||  ||||||| |||||||||||||||||||  |  |||||| |||||||||||||||||||||||||||||| ||||||    
T  48569659 actatctccctctaccacgaagaacagcttcggcccccatcctccaaaccaccatccgccacaccatacctagccaccaacaccctacgccacaa 48569565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 190
Target Start/End: Original strand, 2364794 - 2364897
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||||||||||||||||||||||| |||||| | | |||||||     
T  2364794 ctcacaatctccctccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaag 2364893  T
Q  187 catc 190  Q
    ||||    
T  2364894 catc 2364897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 962799 - 962689
Alignment:
Q  74 cccatcccggattctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacacc 173  Q
    ||||||||  || ||||||||||||| ||||||| | |||||||| || |||||||||||||  |  |||||| || |||||||||||||||| ||||||    
T  962799 cccatccctaatcctcactatctccctccaccaagatgaacaactccgacccccatcctccaaaccaccatccgccccaccatacctagccactaacacc 962700  T
Q  174 ctacaccacaa 184  Q
    |||| ||||||    
T  962699 ctacgccacaa 962689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 93 - 185
Target Start/End: Complemental strand, 12341872 - 12341780
Alignment:
Q  93 atctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaa 185  Q
    ||||||| ||||||  |||| ||||| ||||||||||||||||  |  ||||||||||| ||||||||||||| ||||||||||| |||||||    
T  12341872 atctccctccaccacgaagagcaactccggcccccatcctccaaaccaccatcctccacgccatacctagccaacaacaccctactccacaaa 12341780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 190
Target Start/End: Complemental strand, 10323194 - 10323091
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||| ||||||| ||||||  ||||| |||| ||||||||||||||||  |  |||||||||||||||||||||||||| |||||| | | |||||||     
T  10323194 ctcacaatctccctccaccacgaagaataactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaag 10323095  T
Q  187 catc 190  Q
    ||||    
T  10323094 catc 10323091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 173
Target Start/End: Complemental strand, 19919852 - 19919766
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacacc 173  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |   ||||||||||||||||||||||||| ||||||    
T  19919852 ctcacaatctccctccaccacgaagaacaactccggcccccatcctccaaaccgtcatcctccacaccatacctagccactaacacc 19919766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 173
Target Start/End: Complemental strand, 34332438 - 34332352
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacacc 173  Q
    ||||||||||||| ||||||  |||||||||| | ||||||||||||||  |  |||||| ||||||||||||||||||| ||||||    
T  34332438 ctcactatctccctccaccacgaagaacaactcccgcccccatcctccaaacctccatccgccacaccatacctagccactaacacc 34332352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 3141368 - 3141465
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaa 184  Q
    ||||||||||||| ||||||| | |||||| | ||||||||||||||||     |||||| || |||||||||||||||| |||||||||| ||||||    
T  3141368 ctcactatctcccgccaccaagatgaacaattccggcccccatcctccaaatcaccatccgccgcaccatacctagccactaacaccctacgccacaa 3141465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 52250733 - 52250653
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacacca 181  Q
    ||||||| |||||| ||| ||||||||| |||||| || |||||||||| ||||||| || ||||||||||||||| ||||    
T  52250733 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctatacca 52250653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 8130482 - 8130565
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaa 184  Q
    ||||||| |||||| ||| ||||||||| |||||| || ||||||   ||||||||||||||| |||||||||||| |||||||    
T  8130482 ccaccaaaaagaaccactccggcccccaacctccaacctcccatcacgcacaccatacctagcaaccaacaccctataccacaa 8130565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 16179464 - 16179561
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaa 184  Q
    ||||| ||||||| ||||||| |||||||||| ||||||||||||||||  |  ||| | || ||||||||||| ||||| |||||| ||| ||||||    
T  16179464 ctcacaatctcccgccaccaagaagaacaactccggcccccatcctccaaacctccaccgtctacaccatacctcgccactaacaccttacgccacaa 16179561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 185
Target Start/End: Complemental strand, 20531677 - 20531576
Alignment:
Q  84 attctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccaca 183  Q
    |||||||||||||||| ||||||| ||||| |||| |  |||||||| ||||  |  ||||||||| || |||||||||| ||||||||| ||| |||||    
T  20531677 attctcactatctccctccaccaagaagaataactccaacccccatcttccaaacctccatcctccgcagcatacctagctaccaacaccttacgccaca 20531578  T
Q  184 aa 185  Q
    ||    
T  20531577 aa 20531576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 6825372 - 6825433
Alignment:
Q  120 cggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacacca 181  Q
    ||||||||| || ||| || |||||||||| |||||||||  ||||||||||||||| ||||    
T  6825372 cggcccccaaccgccaacctcccatcctcctcaccataccgcgccaccaacaccctatacca 6825433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 185
Target Start/End: Complemental strand, 17605957 - 17605859
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaa 185  Q
    ||||| ||||||| |||| || |||||||||| ||||||||||||||||  |  ||||||||||| ||||||||||||| ||||||||||| |||||||    
T  17605957 ctcacaatctccctccacaaagaagaacaactccggcccccatcctccaaaccaccatcctccacgccatacctagccaacaacaccctactccacaaa 17605859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 84 - 157
Target Start/End: Original strand, 10922067 - 10922140
Alignment:
Q  84 attctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccata 157  Q
    |||||||||||||||| ||||||| |||||||||| ||||||||||||| |||||  |||||||||||||||||    
T  10922067 attctcactatctccctccaccaagaagaacaactccggcccccatccttcagccttccatcctccacaccata 10922140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 88 - 181
Target Start/End: Complemental strand, 18682196 - 18682103
Alignment:
Q  88 tcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacacca 181  Q
    |||||||||||| ||||||| |||||||||| ||||||||||||||||  |  |||||||||  ||||||||| |||||||||||| |||||||    
T  18682196 tcactatctcccgccaccaagaagaacaactccggcccccatcctccaaacctccatcctccgaaccatacctggccaccaacaccttacacca 18682103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 13938236 - 13938333
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaa 184  Q
    ||||||||||||  ||||||| | |||||||| ||||||||||||||||  |  |||||| || |||||||||||||||| |||||||||| ||||||    
T  13938236 ctcactatctcctgccaccaagatgaacaactccggcccccatcctccaaaccaccatccgccgcaccatacctagccactaacaccctacgccacaa 13938333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 10576870 - 10576783
Alignment:
Q  90 actatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctac 177  Q
    |||||||||| ||||||  |||| ||||| ||||||||||||||||  |  |||||| |||||||||||||||||| |||||||||||    
T  10576870 actatctccctccaccacgaagagcaactccggcccccatcctccaaaccaccatccgccacaccatacctagccaacaacaccctac 10576783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 90 - 173
Target Start/End: Complemental strand, 14372611 - 14372528
Alignment:
Q  90 actatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacacc 173  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||  |   | ||| ||||||||||||||||||||||||||    
T  14372611 actatctccctccaccaagaagaacaactccggcccccatcctccaaactttcgtccgccacaccatacctagccaccaacacc 14372528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 173
Target Start/End: Original strand, 2554123 - 2554209
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacacc 173  Q
    |||| |||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||| ||||||||||||||||||| ||||||    
T  2554123 ctcattatctccctccaccacgaagaacaactccggcccccatcctccaaacctccatccgccacaccatacctagccactaacacc 2554209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 185
Target Start/End: Complemental strand, 17577335 - 17577243
Alignment:
Q  93 atctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaa 185  Q
    ||||||| ||||||  ||||||||||  |||||||||||||||  |   |||||||||| ||||||||||||| ||||||||||| |||||||    
T  17577335 atctccctccaccacaaagaacaactctggcccccatcctccaaaccatcatcctccacgccatacctagccaacaacaccctactccacaaa 17577243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 5041980 - 5042066
Alignment:
Q  33 gacacacacgacgcaaaccacccatcactcctaccttcaaccccatcccggattctcactatctcccaccaccaacaagaacaacttc 120  Q
    ||||||||||   |||||||||| ||||  |||||||| |||||||| ||||||||||||||||||| ||||||| ||||| ||||||    
T  5041980 gacacacacgcaacaaaccaccc-tcacgactaccttctaccccatctcggattctcactatctccctccaccaaaaagaataacttc 5042066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 21629692 - 21629647
Alignment:
Q  140 cccatcctccacaccatacctagccaccaacaccctacaccacaaa 185  Q
    |||||||||||| ||||||||||||| ||||||||||| |||||||    
T  21629692 cccatcctccacgccatacctagccaacaacaccctactccacaaa 21629647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 135
Target Start/End: Complemental strand, 5085641 - 5085601
Alignment:
Q  95 ctcccaccaccaacaagaacaacttcggcccccatcctcca 135  Q
    ||||| ||||||| |||||||||||||||||||||||||||    
T  5085641 ctcccgccaccaagaagaacaacttcggcccccatcctcca 5085601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 173
Target Start/End: Original strand, 15602855 - 15602927
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacacc 173  Q
    |||||||  ||||| ||| |||||||||||||||| || ||||||   ||||||||||||||| |||||||||    
T  15602855 ccaccaaatagaaccactccggcccccatcctccaacctcccatcacgcacaccatacctagcaaccaacacc 15602927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 15956561 - 15956517
Alignment:
Q  140 cccatcctccacaccatacctagccaccaacaccctacaccacaa 184  Q
    ||||||| |||||||||||||||||||||||||| ||| ||||||    
T  15956561 cccatccgccacaccatacctagccaccaacaccttacgccacaa 15956517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 181
Target Start/End: Original strand, 26514245 - 26514335
Alignment:
Q  91 ctatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacacca 181  Q
    ||||||||| |||||||  ||||| ||| ||||||||| ||||||  | |||  ||||| ||||||||| |||||||||||| ||| ||||    
T  26514245 ctatctccctccaccaaatagaaccactccggcccccaacctccaaactccctgcctcctcaccataccgagccaccaacactctatacca 26514335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 18588902 - 18588951
Alignment:
Q  123 cccccatcctccagccgcccatcctccacaccatacctagccaccaacac 172  Q
    ||||||||||||| || ||| |||||| ||||||| ||||||||||||||    
T  18588902 cccccatcctccaacctcccgtcctcctcaccatatctagccaccaacac 18588951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 24767065 - 24767004
Alignment:
Q  74 cccatcccggattctcactatctcccaccaccaacaagaacaacttcggcccccatcctcca 135  Q
    ||||||||  || ||||||||||||| ||||||  |||||||||| || |||||||||||||    
T  24767065 cccatccctaatcctcactatctccctccaccacgaagaacaactccgacccccatcctcca 24767004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 181
Target Start/End: Original strand, 32186201 - 32186294
Alignment:
Q  88 tcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacacca 181  Q
    |||||| ||||| ||||||| |||||  ||| ||||||||| |||||| || |||| || || ||| ||| || ||||||||||||||| ||||    
T  32186201 tcactacctccctccaccaagaagaagcactccggcccccaacctccaacctcccagccacctcactatatctcgccaccaacaccctatacca 32186294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 135
Target Start/End: Complemental strand, 503147 - 503107
Alignment:
Q  95 ctcccaccaccaacaagaacaacttcggcccccatcctcca 135  Q
    ||||| ||||||| |||||||||| ||||||||||||||||    
T  503147 ctcccgccaccaagaagaacaactccggcccccatcctcca 503107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 135
Target Start/End: Original strand, 8264748 - 8264788
Alignment:
Q  95 ctcccaccaccaacaagaacaacttcggcccccatcctcca 135  Q
    ||||| ||||||| |||||||||| ||||||||||||||||    
T  8264748 ctcccgccaccaagaagaacaactccggcccccatcctcca 8264788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 24766983 - 24766951
Alignment:
Q  141 ccatcctccacaccatacctagccaccaacacc 173  Q
    |||||| ||||||||||||||||||||||||||    
T  24766983 ccatccgccacaccatacctagccaccaacacc 24766951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 2e-20; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 185
Target Start/End: Complemental strand, 8299805 - 8299707
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaa 185  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  ||||||||||| ||||||||||||| ||||||||||| |||||||    
T  8299805 ctcacaatctccctccaccacaaagaacaactccggcccccatcctccaaaccaccatcctccacgccatacctagccaacaacaccctactccacaaa 8299707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 173
Target Start/End: Complemental strand, 28535298 - 28535212
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacacc 173  Q
    ||||||||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||| ||||||||||||||||||||||||||    
T  28535298 ctcactatctccctccaccatgaagaacaactccggcccccatcctccaaacctccatccgccacaccatacctagccaccaacacc 28535212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 33170162 - 33170272
Alignment:
Q  74 cccatcccggattctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacacc 173  Q
    ||||||||  || ||||||||||||| ||||||| | |||||||| ||||||||||||||||  |  |||||| || |||||||||||||||| ||||||    
T  33170162 cccatccctaatcctcactatctcccgccaccaagatgaacaactccggcccccatcctccaaaccaccatccgccgcaccatacctagccactaacacc 33170261  T
Q  174 ctacaccacaa 184  Q
    |||| ||||||    
T  33170262 ctacgccacaa 33170272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 42928648 - 42928742
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacacca 181  Q
    |||||||||| || ||||||  |||||||||| ||||||||||||||||  |  |||||| ||||| ||||||||||||||||||||||||||||    
T  42928648 ctcactatctgcctccaccacgaagaacaactccggcccccatcctccaaacctccatccgccacatcatacctagccaccaacaccctacacca 42928742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 190
Target Start/End: Original strand, 42514237 - 42514340
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||||||||||||||||||||||| |||||| | | |||||||     
T  42514237 ctcacaatctccctccaccacgaagaacaactccggcccccatcctccaaactgccatcctccacaccatacctagccactaacacctttctccacaaag 42514336  T
Q  187 catc 190  Q
    ||||    
T  42514337 catc 42514340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 87 - 173
Target Start/End: Original strand, 31642028 - 31642114
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacacc 173  Q
    ||||||||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||| |||||||||| |||||||||||||||    
T  31642028 ctcactatctcccgccaccatgaagaacaactccggcccccatcctccaaacctccatccgccacaccatatctagccaccaacacc 31642114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 30731937 - 30731858
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccac 166  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  ||||||||||||||||||||||||||    
T  30731937 ctcacaatctccctccaccatgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccac 30731858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 173
Target Start/End: Complemental strand, 27116796 - 27116710
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacacc 173  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  ||||||||||| |||||||||||||| ||||||    
T  27116796 ctcacgatctccctccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacgccatacctagccactaacacc 27116710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 27796009 - 27796091
Alignment:
Q  95 ctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctac 177  Q
    ||||| ||||||  ||||||||||  |||||||||||||||  |  |||||| ||||||||||||||||||||||||||||||    
T  27796009 ctccctccaccacgaagaacaactctggcccccatcctccaaaccaccatccgccacaccatacctagccaccaacaccctac 27796091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 173
Target Start/End: Complemental strand, 35983414 - 35983328
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacacc 173  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||| || |||||||||||||||||||||||    
T  35983414 ctcacaatctccctccaccacgaagaacaactccggcccccatcctccaaacctccatccgcctcaccatacctagccaccaacacc 35983328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 173
Target Start/End: Original strand, 23238900 - 23238986
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacacc 173  Q
    ||||||||||||| ||||||  | |||||||| ||||||||| ||||||  |  |||||| ||||||||||||||||||| ||||||    
T  23238900 ctcactatctccctccaccacgacgaacaactccggcccccaacctccaaacctccatccgccacaccatacctagccactaacacc 23238986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 109 - 185
Target Start/End: Original strand, 10780740 - 10780816
Alignment:
Q  109 aagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaa 185  Q
    |||| ||||| ||||||||||||||||  |  |||||| |||| ||||||||||||| ||||||||||| |||||||    
T  10780740 aagagcaactccggcccccatcctccaaaccaccatccgccactccatacctagccaacaacaccctactccacaaa 10780816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 27165573 - 27165525
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctcca 135  Q
    |||| |||||||| ||||||| |||||||||||||||||||||||||||    
T  27165573 ctcattatctccctccaccaagaagaacaacttcggcccccatcctcca 27165525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 41590627 - 41590707
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacacca 181  Q
    ||||||| ||||||  || ||||||||| || ||| || |||||||||| |||||||||| ||||||||||||||| ||||    
T  41590627 ccaccaagaagaacctctccggcccccaaccgccaacctcccatcctcctcaccatacctcgccaccaacaccctatacca 41590707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 36256309 - 36256392
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaa 184  Q
    ||||||| |||||| ||| |||||||||||||||| || |||||||   |||||||| ||| | |||||||||||| |||||||    
T  36256309 ccaccaaaaagaaccactccggcccccatcctccaacctcccatccctaacaccatatctaacaaccaacaccctataccacaa 36256392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 165
Target Start/End: Original strand, 12825716 - 12825794
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagcca 165  Q
    ||||| ||||||| ||||||  ||||||||||  | |||||||||||||  |  |||||||||||||||||||||||||    
T  12825716 ctcacaatctccctccaccacgaagaacaactctgacccccatcctccaaactgccatcctccacaccatacctagcca 12825794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 25857009 - 25856964
Alignment:
Q  140 cccatcctccacaccatacctagccaccaacaccctacaccacaaa 185  Q
    |||||||||||| ||||||||||||| ||||||||||| |||||||    
T  25857009 cccatcctccacgccatacctagccaacaacaccctactccacaaa 25856964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 4297918 - 4297838
Alignment:
Q  101 ccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacacca 181  Q
    ||||||| ||||||  || ||| ||||| || ||| || |||||||||| |||||||||| ||||||||||||||| ||||    
T  4297918 ccaccaagaagaacctctccgggccccaaccgccaacctcccatcctcctcaccatacctcgccaccaacaccctatacca 4297838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 181
Target Start/End: Complemental strand, 15862292 - 15862206
Alignment:
Q  95 ctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacacca 181  Q
    ||||| ||||||| | |||||||| |  |||||| |||||| ||||||| ||||  ||||||||||||| | |||||||||| ||||    
T  15862292 ctccctccaccaatacgaacaactccatcccccaacctccaaccgcccagcctcttcaccatacctagcaatcaacaccctatacca 15862206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 135
Target Start/End: Complemental strand, 22094887 - 22094825
Alignment:
Q  73 ccccatcccggattctcactatctcccaccaccaacaagaacaacttcggcccccatcctcca 135  Q
    |||||||||  |||||| | | ||||| ||||||  |||||||||||||||||||||||||||    
T  22094887 ccccatccctaattctccccacctcccgccaccacgaagaacaacttcggcccccatcctcca 22094825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 181
Target Start/End: Complemental strand, 42039320 - 42039234
Alignment:
Q  95 ctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacacca 181  Q
    ||||| ||||||| || ||  ||| |||||||||||||||| ||||||| || || |||||||  | ||||||||||||||| ||||    
T  42039320 ctccctccaccaagaaaaagcactccggcccccatcctccaaccgcccaaccacctcaccatatttcgccaccaacaccctatacca 42039234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 173
Target Start/End: Complemental strand, 27165535 - 27165502
Alignment:
Q  140 cccatcctccacaccatacctagccaccaacacc 173  Q
    ||||||||||||| ||||||||||||||||||||    
T  27165535 cccatcctccacaacatacctagccaccaacacc 27165502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 25857047 - 25856999
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctcca 135  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||    
T  25857047 ctcacaatctccctccaccacaaagaacaactccggcccccatcctcca 25856999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 190
Target Start/End: Complemental strand, 105466 - 105363
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||||||||||||||||||||||| |||||| | | |||||||     
T  105466 ctcacaatctccctccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaag 105367  T
Q  187 catc 190  Q
    ||||    
T  105366 catc 105363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 1e-18; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 190
Target Start/End: Original strand, 6051120 - 6051223
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||  |  |||||||||||||||||||||||||| |||||| | | |||||||     
T  6051120 ctcacaatctccctccaccacgaagaacaactccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaag 6051219  T
Q  187 catc 190  Q
    ||||    
T  6051220 catc 6051223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 87 - 173
Target Start/End: Complemental strand, 47622700 - 47622614
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacacc 173  Q
    ||||||||||| | ||||||| |||||||||| ||||||| ||||||||  |  |||||| ||||||||||||||||||||||||||    
T  47622700 ctcactatctctctccaccaagaagaacaactccggcccctatcctccaaacctccatccaccacaccatacctagccaccaacacc 47622614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 35541604 - 35541654
Alignment:
Q  140 cccatcctccacaccatacctagccaccaacaccctacaccacaaatcatc 190  Q
    ||||||||||||||||||||||||||| |||||| | | ||||||| ||||    
T  35541604 cccatcctccacaccatacctagccactaacacctttctccacaaagcatc 35541654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 35541566 - 35541614
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctcca 135  Q
    ||||| ||||||| ||||||  |||||||||| ||||||||||||||||    
T  35541566 ctcacgatctccctccaccacgaagaacaactccggcccccatcctcca 35541614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 190
Target Start/End: Original strand, 3769 - 3872
Alignment:
Q  87 ctcactatctcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacaccacaaat 186  Q
    ||||||||||||| ||||||  | |||||||| ||||||||| ||||||  |  ||||||  |||||||||||||||||| |||||| | | |||||||     
T  3769 ctcactatctccctccaccacgacgaacaactccggcccccaacctccaaacctccatccgtcacaccatacctagccactaacacctttctccacaaag 3868  T
Q  187 catc 190  Q
    ||||    
T  3869 catc 3872  T

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Target: scaffold0026 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 181
Target Start/End: Original strand, 67606 - 67691
Alignment:
Q  96 tcccaccaccaacaagaacaacttcggcccccatcctccagccgcccatcctccacaccatacctagccaccaacaccctacacca 181  Q
    |||||||||||| |||||| ||| | ||||||| |||||| || |||  ||||| ||||||||||||  | |||||||||| ||||    
T  67606 tcccaccaccaagaagaaccactccagcccccaacctccaacctccctgcctcctcaccatacctagaaatcaacaccctatacca 67691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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