View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11870_high_37 (Length: 251)
Name: NF11870_high_37
Description: NF11870
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11870_high_37 |
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Alignment Details
Target: chr5 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 20 - 240
Target Start/End: Complemental strand, 41172161 - 41171941
Alignment:
| Q |
20 |
tattaggttctttaaattcatactgtcgctagatttcaagtgtaatcagattaatttctatttgagttctgtatctgagatgattttaatttctgtttca |
119 |
Q |
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| T |
41172161 |
tattaggttctttaaattcatactgtcgctagatttcaagtgtaatcagattaatttctatttgagttctgtatctgagatgattttaatttctgtttca |
41172062 |
T |
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| Q |
120 |
gctaattatatttaattttgttgtttcttttcattaacgtctagggagtgacctatatatacttgaagcatataatctggtgaggcctacataccatacc |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41172061 |
gctaattatatttaattttgttgtttcttttcattaacgtctagggagtgacctatatatacttgaagcatataatctggtgaggcctacataccatacc |
41171962 |
T |
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| Q |
220 |
ctttgatgaatctaggttaga |
240 |
Q |
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||||||||||||||||||||| |
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| T |
41171961 |
ctttgatgaatctaggttaga |
41171941 |
T |
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