View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11870_low_30 (Length: 346)

Name: NF11870_low_30
Description: NF11870
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11870_low_30
NF11870_low_30
[»] chr5 (46 HSPs)
chr5 (226-337)||(28539819-28539930)
chr5 (239-337)||(28538679-28538778)
chr5 (239-337)||(16650854-16650953)
chr5 (234-337)||(19752910-19753013)
chr5 (241-337)||(36486487-36486584)
chr5 (239-337)||(25523072-25523171)
chr5 (249-337)||(19754129-19754217)
chr5 (239-330)||(25056387-25056479)
chr5 (239-337)||(18486901-18487000)
chr5 (239-337)||(36485303-36485402)
chr5 (239-337)||(40255671-40255770)
chr5 (239-337)||(5777904-5778001)
chr5 (239-335)||(22940624-22940720)
chr5 (255-330)||(7311610-7311685)
chr5 (234-337)||(21835039-21835142)
chr5 (238-337)||(42195136-42195234)
chr5 (234-337)||(24332911-24333015)
chr5 (239-337)||(5778835-5778934)
chr5 (239-337)||(25055415-25055514)
chr5 (239-322)||(25524141-25524226)
chr5 (255-325)||(33158118-33158188)
chr5 (235-337)||(20216762-20216865)
chr5 (60-139)||(34708695-34708774)
chr5 (239-337)||(42196199-42196298)
chr5 (255-337)||(1015504-1015586)
chr5 (236-337)||(38834087-38834188)
chr5 (239-311)||(1796057-1796130)
chr5 (239-331)||(33160291-33160384)
chr5 (258-330)||(2686407-2686479)
chr5 (277-337)||(25524097-25524157)
chr5 (60-132)||(36581013-36581085)
chr5 (239-329)||(5962579-5962668)
chr5 (239-317)||(20214199-20214277)
chr5 (234-337)||(18485136-18485247)
chr5 (239-330)||(2186774-2186865)
chr5 (286-337)||(16650043-16650094)
chr5 (239-329)||(18154497-18154586)
chr5 (263-337)||(1797296-1797370)
chr5 (256-309)||(34893686-34893739)
chr5 (255-311)||(2685764-2685820)
chr5 (239-327)||(21834928-21835016)
chr5 (239-310)||(5730444-5730517)
chr5 (267-337)||(5730861-5730931)
chr5 (233-286)||(24025313-24025366)
chr5 (239-291)||(38476725-38476778)
chr5 (228-291)||(31576607-31576671)
[»] chr4 (51 HSPs)
chr4 (239-337)||(19750574-19750672)
chr4 (239-337)||(19789134-19789232)
chr4 (241-337)||(31599794-31599891)
chr4 (228-337)||(1835101-1835211)
chr4 (239-337)||(1290197-1290296)
chr4 (239-337)||(31600984-31601083)
chr4 (226-333)||(49308031-49308137)
chr4 (239-331)||(26421627-26421719)
chr4 (239-337)||(1963199-1963298)
chr4 (239-337)||(48780251-48780350)
chr4 (239-337)||(17382996-17383094)
chr4 (237-337)||(8155739-8155839)
chr4 (227-330)||(35935539-35935644)
chr4 (234-329)||(8758844-8758940)
chr4 (239-335)||(17388212-17388308)
chr4 (234-337)||(5525358-5525461)
chr4 (239-337)||(13509358-13509456)
chr4 (239-337)||(1834122-1834222)
chr4 (238-337)||(12129625-12129725)
chr4 (226-337)||(21539070-21539182)
chr4 (239-337)||(10471387-10471486)
chr4 (239-337)||(25684937-25685036)
chr4 (239-337)||(25685821-25685920)
chr4 (239-337)||(5526125-5526223)
chr4 (234-337)||(10470544-10470648)
chr4 (228-336)||(27257960-27258068)
chr4 (239-337)||(8757678-8757776)
chr4 (234-337)||(13386531-13386636)
chr4 (239-337)||(35934347-35934444)
chr4 (259-337)||(46638724-46638802)
chr4 (239-337)||(10447009-10447109)
chr4 (235-337)||(1289096-1289199)
chr4 (239-337)||(1964440-1964539)
chr4 (239-337)||(52491606-52491705)
chr4 (239-337)||(21178000-21178098)
chr4 (235-329)||(37728572-37728666)
chr4 (257-337)||(33310088-33310168)
chr4 (60-132)||(37576639-37576711)
chr4 (239-337)||(50909671-50909771)
chr4 (235-318)||(55603549-55603632)
chr4 (255-337)||(10448259-10448341)
chr4 (239-330)||(13386017-13386111)
chr4 (234-339)||(14868888-14868992)
chr4 (234-339)||(14876942-14877046)
chr4 (255-328)||(50909292-50909365)
chr4 (239-311)||(49306778-49306850)
chr4 (257-329)||(54110635-54110707)
chr4 (234-337)||(3928857-3928961)
chr4 (234-337)||(48781045-48781148)
chr4 (230-319)||(55602370-55602459)
chr4 (234-337)||(3927664-3927768)
[»] chr1 (49 HSPs)
chr1 (235-335)||(43058785-43058885)
chr1 (227-337)||(24426074-24426185)
chr1 (239-337)||(39699766-39699864)
chr1 (239-337)||(24422803-24422902)
chr1 (234-330)||(52274966-52275063)
chr1 (226-337)||(51684356-51684468)
chr1 (226-337)||(52827337-52827449)
chr1 (239-337)||(36613903-36614002)
chr1 (235-337)||(45149969-45150072)
chr1 (235-337)||(50680331-50680433)
chr1 (239-311)||(14999288-14999360)
chr1 (239-337)||(23980465-23980564)
chr1 (234-337)||(43378712-43378815)
chr1 (239-337)||(41364832-41364930)
chr1 (234-337)||(33088616-33088720)
chr1 (234-337)||(35594215-35594317)
chr1 (234-337)||(45157208-45157311)
chr1 (239-337)||(51685764-51685863)
chr1 (235-337)||(52276162-52276265)
chr1 (224-337)||(11436030-11436144)
chr1 (239-327)||(11437208-11437297)
chr1 (239-337)||(39222472-39222572)
chr1 (234-337)||(39153115-39153219)
chr1 (239-337)||(35067001-35067100)
chr1 (258-329)||(43060013-43060084)
chr1 (239-337)||(45148584-45148682)
chr1 (235-337)||(52828069-52828172)
chr1 (239-337)||(7675458-7675556)
chr1 (235-337)||(7983049-7983151)
chr1 (239-311)||(7674531-7674602)
chr1 (234-337)||(37526877-37526980)
chr1 (228-330)||(39698555-39698657)
chr1 (239-337)||(35595191-35595291)
chr1 (256-308)||(14999983-15000035)
chr1 (257-341)||(33088089-33088173)
chr1 (234-337)||(36612851-36612954)
chr1 (234-337)||(41366130-41366233)
chr1 (235-337)||(39151930-39152033)
chr1 (259-330)||(44404466-44404537)
chr1 (241-330)||(46066530-46066617)
chr1 (60-132)||(27039340-27039412)
chr1 (60-139)||(42883159-42883238)
chr1 (239-337)||(12389981-12390079)
chr1 (258-337)||(25652737-25652816)
chr1 (286-337)||(44411965-44412016)
chr1 (238-336)||(45156051-45156150)
chr1 (239-311)||(11190388-11190461)
chr1 (238-329)||(30249497-30249589)
chr1 (255-307)||(48441085-48441137)
[»] chr6 (30 HSPs)
chr6 (236-337)||(1829602-1829704)
chr6 (249-337)||(10785912-10786000)
chr6 (239-337)||(10784595-10784695)
chr6 (239-339)||(27322065-27322165)
chr6 (239-337)||(8659268-8659367)
chr6 (239-337)||(16704496-16704595)
chr6 (258-337)||(26575053-26575132)
chr6 (234-337)||(3721610-3721714)
chr6 (239-337)||(7314883-7314981)
chr6 (239-337)||(7316293-7316392)
chr6 (239-329)||(8821876-8821967)
chr6 (242-328)||(14822366-14822453)
chr6 (239-334)||(16703573-16703666)
chr6 (235-337)||(34834578-34834681)
chr6 (239-331)||(8822798-8822891)
chr6 (234-329)||(8660211-8660306)
chr6 (260-336)||(12350823-12350898)
chr6 (239-337)||(27437831-27437930)
chr6 (234-337)||(3333025-3333129)
chr6 (239-310)||(3722533-3722605)
chr6 (239-328)||(14823583-14823674)
chr6 (253-337)||(26574637-26574720)
chr6 (239-337)||(12382710-12382809)
chr6 (255-337)||(17496817-17496900)
chr6 (239-313)||(6842306-6842381)
chr6 (239-339)||(27318318-27318420)
chr6 (239-337)||(30495696-30495794)
chr6 (239-337)||(3333152-3333250)
chr6 (237-337)||(5658757-5658858)
chr6 (234-337)||(29473075-29473179)
[»] chr3 (56 HSPs)
chr3 (234-337)||(54540789-54540893)
chr3 (230-337)||(46721219-46721327)
chr3 (235-330)||(7267643-7267738)
chr3 (239-336)||(7758405-7758503)
chr3 (239-337)||(29931229-29931328)
chr3 (239-337)||(29980383-29980482)
chr3 (239-337)||(51037539-51037637)
chr3 (234-337)||(12703499-12703602)
chr3 (239-337)||(22776811-22776910)
chr3 (235-337)||(7268826-7268928)
chr3 (239-330)||(8456481-8456572)
chr3 (239-330)||(12700178-12700268)
chr3 (240-338)||(24516464-24516563)
chr3 (239-337)||(47609700-47609799)
chr3 (235-337)||(47610579-47610682)
chr3 (239-330)||(534502-534594)
chr3 (234-337)||(29932698-29932801)
chr3 (234-337)||(29981852-29981955)
chr3 (234-329)||(54539753-54539849)
chr3 (239-337)||(47614188-47614287)
chr3 (239-337)||(51469975-51470074)
chr3 (239-339)||(5029680-5029780)
chr3 (239-337)||(19984852-19984951)
chr3 (239-337)||(46719944-46720043)
chr3 (239-337)||(51038789-51038888)
chr3 (236-337)||(23770406-23770508)
chr3 (262-337)||(31645000-31645075)
chr3 (239-329)||(49216250-49216341)
chr3 (239-329)||(51470462-51470552)
chr3 (234-337)||(55191994-55192097)
chr3 (259-329)||(34019152-34019222)
chr3 (239-321)||(53901403-53901484)
chr3 (239-331)||(535787-535880)
chr3 (249-328)||(6170286-6170363)
chr3 (239-330)||(8875909-8876001)
chr3 (234-337)||(52839035-52839139)
chr3 (239-337)||(52840603-52840702)
chr3 (239-337)||(53616015-53616114)
chr3 (239-335)||(11671342-11671438)
chr3 (60-132)||(33148902-33148973)
chr3 (249-312)||(6249623-6249686)
chr3 (239-336)||(40426778-40426877)
chr3 (233-327)||(52104478-52104569)
chr3 (234-337)||(54987006-54987108)
chr3 (239-337)||(19986069-19986170)
chr3 (239-337)||(28262196-28262294)
chr3 (226-310)||(5001190-5001275)
chr3 (66-126)||(4969977-4970037)
chr3 (239-337)||(28263110-28263209)
chr3 (239-293)||(47615591-47615646)
chr3 (268-337)||(55191544-55191612)
chr3 (259-337)||(4271464-4271542)
chr3 (226-291)||(26633351-26633416)
chr3 (230-271)||(49398121-49398162)
chr3 (263-327)||(6250585-6250649)
chr3 (305-337)||(47615576-47615608)
[»] chr7 (35 HSPs)
chr7 (235-337)||(42886285-42886388)
chr7 (239-337)||(31659625-31659725)
chr7 (241-337)||(14999154-14999249)
chr7 (249-336)||(18372457-18372544)
chr7 (234-337)||(7500453-7500556)
chr7 (239-337)||(17781664-17781763)
chr7 (239-329)||(18371427-18371518)
chr7 (239-336)||(22630452-22630550)
chr7 (239-331)||(127340-127431)
chr7 (267-337)||(22629518-22629588)
chr7 (239-337)||(7501851-7501950)
chr7 (239-331)||(17782558-17782651)
chr7 (234-337)||(128600-128704)
chr7 (239-337)||(3227593-3227692)
chr7 (239-337)||(3227111-3227209)
chr7 (239-337)||(31949325-31949424)
chr7 (227-337)||(47369772-47369883)
chr7 (239-337)||(48934902-48935001)
chr7 (239-337)||(21505419-21505516)
chr7 (60-132)||(5060925-5060997)
chr7 (234-337)||(11662550-11662654)
chr7 (239-337)||(47525366-47525465)
chr7 (228-307)||(20163585-20163665)
chr7 (239-337)||(31949801-31949900)
chr7 (239-337)||(46482600-46482699)
chr7 (239-336)||(11658382-11658480)
chr7 (239-337)||(30439357-30439455)
chr7 (239-309)||(34174010-34174080)
chr7 (235-293)||(46483551-46483609)
chr7 (255-311)||(597309-597364)
chr7 (228-327)||(31661018-31661118)
chr7 (243-309)||(47524532-47524599)
chr7 (234-311)||(43900513-43900590)
chr7 (255-330)||(34351512-34351587)
chr7 (303-337)||(14998048-14998082)
[»] chr8 (43 HSPs)
chr8 (237-337)||(29968336-29968436)
chr8 (226-337)||(30335629-30335741)
chr8 (234-335)||(22221365-22221467)
chr8 (234-335)||(22227707-22227809)
chr8 (239-337)||(5513985-5514083)
chr8 (239-329)||(24122886-24122976)
chr8 (233-337)||(8388461-8388564)
chr8 (245-337)||(18978029-18978121)
chr8 (239-337)||(10006347-10006446)
chr8 (234-337)||(12353360-12353462)
chr8 (239-337)||(22220391-22220490)
chr8 (226-337)||(32207324-32207434)
chr8 (249-337)||(1823566-1823654)
chr8 (249-337)||(1858011-1858099)
chr8 (239-337)||(10007762-10007861)
chr8 (239-337)||(11287779-11287878)
chr8 (241-330)||(1824084-1824174)
chr8 (241-330)||(1858529-1858619)
chr8 (234-330)||(12351919-12352016)
chr8 (245-337)||(18970920-18971012)
chr8 (239-330)||(30336507-30336599)
chr8 (235-337)||(11282007-11282110)
chr8 (239-337)||(18979119-18979218)
chr8 (259-337)||(24123897-24123975)
chr8 (235-335)||(8389690-8389791)
chr8 (239-337)||(43661268-43661367)
chr8 (278-336)||(29043441-29043499)
chr8 (234-337)||(30570255-30570358)
chr8 (229-336)||(40471147-40471254)
chr8 (241-331)||(43661828-43661919)
chr8 (255-337)||(24488679-24488760)
chr8 (250-331)||(5003103-5003184)
chr8 (239-337)||(5514270-5514367)
chr8 (239-301)||(23170034-23170095)
chr8 (239-337)||(30568890-30568988)
chr8 (240-337)||(45112875-45112971)
chr8 (239-337)||(11283208-11283307)
chr8 (228-337)||(38980043-38980153)
chr8 (228-337)||(39011140-39011250)
chr8 (67-113)||(43996003-43996049)
chr8 (239-282)||(11288914-11288958)
chr8 (294-330)||(24359866-24359902)
chr8 (295-327)||(34625209-34625241)
[»] chr2 (43 HSPs)
chr2 (226-337)||(38840492-38840604)
chr2 (239-337)||(23869534-23869632)
chr2 (239-332)||(7899886-7899980)
chr2 (234-337)||(22848189-22848293)
chr2 (258-337)||(11258810-11258889)
chr2 (235-337)||(7898690-7898793)
chr2 (239-337)||(36449781-36449880)
chr2 (239-329)||(13030295-13030383)
chr2 (239-337)||(18300724-18300820)
chr2 (235-337)||(36450920-36451022)
chr2 (142-220)||(38147135-38147213)
chr2 (239-337)||(18797249-18797349)
chr2 (234-337)||(8535655-8535757)
chr2 (239-337)||(18299376-18299475)
chr2 (239-329)||(18905995-18906085)
chr2 (239-335)||(18904370-18904467)
chr2 (256-337)||(28617943-28618023)
chr2 (234-337)||(22587953-22588056)
chr2 (249-337)||(38839256-38839344)
chr2 (234-337)||(802590-802693)
chr2 (239-337)||(41878095-41878196)
chr2 (234-337)||(11257620-11257723)
chr2 (249-329)||(41879219-41879299)
chr2 (234-329)||(24475223-24475318)
chr2 (239-337)||(26544152-26544250)
chr2 (239-337)||(1033214-1033311)
chr2 (239-311)||(18868927-18869000)
chr2 (242-311)||(24476869-24476937)
chr2 (239-330)||(1034475-1034567)
chr2 (239-329)||(11938796-11938886)
chr2 (255-318)||(32739643-32739706)
chr2 (234-311)||(13567970-13568048)
chr2 (278-335)||(11996750-11996807)
chr2 (256-337)||(22587522-22587602)
chr2 (261-337)||(26545520-26545596)
chr2 (249-331)||(18869168-18869251)
chr2 (267-337)||(810780-810850)
chr2 (259-337)||(1093145-1093223)
chr2 (234-335)||(13570558-13570660)
chr2 (239-311)||(16446157-16446230)
chr2 (233-293)||(21837298-21837357)
chr2 (236-291)||(13830267-13830322)
chr2 (309-337)||(12812910-12812938)
[»] scaffold0302 (2 HSPs)
scaffold0302 (239-337)||(17473-17572)
scaffold0302 (239-337)||(18775-18874)
[»] scaffold0019 (2 HSPs)
scaffold0019 (239-337)||(60093-60192)
scaffold0019 (239-337)||(61458-61557)
[»] scaffold0632 (1 HSPs)
scaffold0632 (239-337)||(3307-3405)
[»] scaffold0294 (2 HSPs)
scaffold0294 (239-332)||(5442-5536)
scaffold0294 (221-332)||(4427-4539)
[»] scaffold0112 (1 HSPs)
scaffold0112 (239-332)||(37151-37244)
[»] scaffold1303 (1 HSPs)
scaffold1303 (239-337)||(1442-1541)
[»] scaffold0093 (2 HSPs)
scaffold0093 (239-329)||(2472-2562)
scaffold0093 (239-329)||(7095-7185)
[»] scaffold0369 (1 HSPs)
scaffold0369 (234-327)||(13191-13283)
[»] scaffold0049 (2 HSPs)
scaffold0049 (234-337)||(7414-7518)
scaffold0049 (239-335)||(7541-7637)
[»] scaffold2034 (2 HSPs)
scaffold2034 (239-337)||(236-335)
scaffold2034 (259-337)||(977-1055)
[»] scaffold0320 (1 HSPs)
scaffold0320 (239-337)||(19491-19590)
[»] scaffold0059 (2 HSPs)
scaffold0059 (255-330)||(3695-3770)
scaffold0059 (239-337)||(4729-4827)
[»] scaffold0003 (1 HSPs)
scaffold0003 (239-337)||(49432-49531)
[»] scaffold0186 (1 HSPs)
scaffold0186 (239-337)||(23084-23181)
[»] scaffold0045 (1 HSPs)
scaffold0045 (239-311)||(49109-49182)
[»] scaffold0586 (2 HSPs)
scaffold0586 (235-330)||(6342-6438)
scaffold0586 (239-331)||(9032-9123)
[»] scaffold0321 (1 HSPs)
scaffold0321 (239-335)||(18731-18828)


Alignment Details
Target: chr5 (Bit Score: 80; Significance: 2e-37; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 226 - 337
Target Start/End: Complemental strand, 28539930 - 28539819
Alignment:
Q  226 ataaaaacaaggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatt 325  Q
    ||||||| |||||||||||||| ||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| | |||||||||||    
T  28539930 ataaaaaaaaggttaaagtgcatttttcccccctaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaattttggtcccctaagatt 28539831  T
Q  326 tagcccctttgc 337  Q
    ||| ||||||||    
T  28539830 tagtccctttgc 28539819  T

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Target: chr5; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 28538679 - 28538778
Alignment:
Q  239 taaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| |||| ||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28538679 taaagtgcacttttccacccgtaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttagccccctaagatttagcccctttgc 28538778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 16650953 - 16650854
Alignment:
Q  239 taaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||    
T  16650953 taaagtgcacttttccacccttaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttagccccctaaggtttagcccatttgc 16650854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 234 - 337
Target Start/End: Original strand, 19752910 - 19753013
Alignment:
Q  234 aaggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccct 333  Q
    |||| ||||||||||||||| ||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||     
T  19752910 aaggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccctatgatttagcccca 19753009  T
Q  334 ttgc 337  Q
    ||||    
T  19753010 ttgc 19753013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 241 - 337
Target Start/End: Complemental strand, 36486584 - 36486487
Alignment:
Q  241 aagtgcactttt-cacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    |||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||    
T  36486584 aagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtcccctaagatttagtccctttgc 36486487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 25523072 - 25523171
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||||| |||||| ||||||||| ||||||  |||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  25523072 taaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttgaccccctaagatttagcccctttgc 25523171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 249 - 337
Target Start/End: Complemental strand, 19754217 - 19754129
Alignment:
Q  249 ttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||| ||||||||||| ||||||||| ||||||| |||||||| |||||||||||||||||| |||||||| ||||||||||| ||||    
T  19754217 ttttcccccctaactttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttggccccctatgatttagccccattgc 19754129  T

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Target: chr5; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 239 - 330
Target Start/End: Complemental strand, 25056479 - 25056387
Alignment:
Q  239 taaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcc 330  Q
    ||||||||||||||| || ||||||||| ||||||||| |||||||||||||||||||  ||||||||||||||  |||||||||||||||||    
T  25056479 taaagtgcacttttccactcctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcc 25056387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 18487000 - 18486901
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||| | ||||| |||||| ||||||||| ||||||| ||||||||||| | |||| |||||||| |||||||||||||||||||||||||    
T  18487000 taaagtgcactttcccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggccccctaagatttagcccctttgc 18486901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 36485303 - 36485402
Alignment:
Q  239 taaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||| ||||| |||||||||||| ||||||||  |||||||||| | ||||||||||||||| |||||| ||||||||||||||| |||||||||    
T  36485303 taaagtgcatttttccacccctaactttaaaaaacttacaattttgacctcttaagtacaaaaactataattttggccccctaagatttaacccctttgc 36485402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 40255770 - 40255671
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| || || || ||||||||||||| |||||||||||||||| |||| ||||||||||||| ||||||||||||||| |||| ||||    
T  40255770 taaagtgcacttttcccctcttaatttttaaaaacttgcaattttgaccccctaaatacagaaactacaattttggccccctaagatttaaccccattgc 40255671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 5777904 - 5778001
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||| | ||||||||||| ||||||||| |||||||||||||||||||| ||||| |||||||   ||||||||||||||||||| ||||    
T  5777904 taaagtgcactttcc-cccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgc 5778001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 239 - 335
Target Start/End: Complemental strand, 22940720 - 22940624
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagccccttt 335  Q
    ||||||||||||||| ||||| |||||| ||||||||| ||||||| ||||||||||||||||| ||||||||| | ||||||| |||||||||||||    
T  22940720 taaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaattacaatttt-gacccctaaaatttagccccttt 22940624  T

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Target: chr5; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 7311610 - 7311685
Alignment:
Q  255 cccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcc 330  Q
    ||||||||||| ||||||||| ||| ||| || || ||||||||||||||||||||||||||||||||||||||||    
T  7311610 cccctaactttcaaaaacttgcaatattggcctcccaagtacaaaaactacaattttagccccctaagatttagcc 7311685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 234 - 337
Target Start/End: Original strand, 21835039 - 21835142
Alignment:
Q  234 aaggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccct 333  Q
    |||| ||||||||||||| | || |||| ||| ||||| |||  |||||||||||||| |||||||||||||||||||  |||||||||||||| |||||    
T  21835039 aaggctaaagtgcactttccccctctaagtttgaaaaagttgtgattttgaccccctatgtacaaaaactacaattttgaccccctaagatttaacccct 21835138  T
Q  334 ttgc 337  Q
    ||||    
T  21835139 ttgc 21835142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 238 - 337
Target Start/End: Original strand, 42195136 - 42195234
Alignment:
Q  238 ttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    |||||||||||||||| ||| ||||||| ||||| |||  |||||| ||||||| |||||||| |||||||||| | |||||||||||||||||||||||    
T  42195136 ttaaagtgcacttttcccccttaacttt-aaaaagttgcgattttggccccctatgtacaaaatctacaattttggtcccctaagatttagcccctttgc 42195234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 337
Target Start/End: Original strand, 24332911 - 24333015
Alignment:
Q  234 aaggttaaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    |||||||||||||||||||  ||||| || ||| ||||||||| ||||||| |||| || |||||||||||||||||||  ||| |||||||||| ||||    
T  24332911 aaggttaaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccctctaagatttaacccc 24333010  T
Q  333 tttgc 337  Q
    |||||    
T  24333011 tttgc 24333015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 5778934 - 5778835
Alignment:
Q  239 taaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||| |||||||| ||||||||| ||||||  |||||||||||| ||||| |||||||   ||||||||||||||||||| ||||    
T  5778934 taaagtgcacttttccccctctaactttcaaaaacttgcaatttttgccccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgc 5778835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 25055415 - 25055514
Alignment:
Q  239 taaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||| |||||||| ||   |||| |||||||| |||||| ||| ||||||||||||||| ||||||||||||||||||| |||||    
T  25055415 taaagtgcacttttccccctctaactttaaacttcttgcaattttgatcccctatgtataaaaactacaattttggccccctaagatttagcccatttgc 25055514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 25524226 - 25524141
Alignment:
Q  239 taaagtgcacttttcacccc--taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaag 322  Q
    ||||||||||||||| ||||  ||| ||||||||| ||| ||||||| ||||||||||||||||||||||||||| ||| ||||||    
T  25524226 taaagtgcacttttcccccccctaatttttaaaaatttgtaattttggccccctaagtacaaaaactacaattttggcctcctaag 25524141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 255 - 325
Target Start/End: Original strand, 33158118 - 33158188
Alignment:
Q  255 cccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatt 325  Q
    ||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||  |||| |||||||    
T  33158118 cccctaactttcaaaaacttgcaattttgacaccctaagtacaaaaactacaattttgaccccttaagatt 33158188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 337
Target Start/End: Complemental strand, 20216865 - 20216762
Alignment:
Q  235 aggttaaagtgcacttttcacccctaactttt-aaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccct 333  Q
    ||||||||||||||||||| ||||| | |||| ||||||||| ||||||  | |||||  |||||||||||||||||| |||||| |||| ||||||| |    
T  20216865 aggttaaagtgcacttttccccccttaattttcaaaaacttgcaattttagctccctatatacaaaaactacaattttggccccccaagaattagcccat 20216766  T
Q  334 ttgc 337  Q
    ||||    
T  20216765 ttgc 20216762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 60 - 139
Target Start/End: Original strand, 34708695 - 34708774
Alignment:
Q  60 tgagttaactcaagttgggatttcaatatgatttttgcagaaatataactagcgtgaattaactcacgcagcgataatat 139  Q
    |||||||| ||| |||||||||||||| |||||||||||||  ||||||||| |||| |||||||| |||| ||||||||    
T  34708695 tgagttaattcacgttgggatttcaatgtgatttttgcagatttataactagtgtgagttaactcatgcagggataatat 34708774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 42196298 - 42196199
Alignment:
Q  239 taaagtgcacttttcacccc-taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||| | |||| ||||||||||||| |||  | |||| ||| ||| |||||||||||||| |||||| ||||||||||||||||| |||||    
T  42196298 taaagtgcactttcccccccctaacttttaaaaagttgtgaatttggccctctatgtacaaaaactacatttttagtcccctaagatttagcccatttgc 42196199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 255 - 337
Target Start/End: Original strand, 1015504 - 1015586
Alignment:
Q  255 cccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||||| ||  ||||||| ||||||  |||||||| ||||||||||| |||||||||| |||| ||||||||    
T  1015504 cccctaacttttaaaaagttacaattttggccccctgtgtacaaaacctacaattttaaccccctaagaattagtccctttgc 1015586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 337
Target Start/End: Original strand, 38834087 - 38834188
Alignment:
Q  236 ggttaaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctt 334  Q
    |||||||||||| ||||  ||||| |||||||||||| |||  ||||||||||  || |||||||||||||||||||||| |||||||||||||  ||||    
T  38834087 ggttaaagtgcatttttttccccttaacttttaaaaagttgcgattttgaccct-tatgtacaaaaactacaattttagctccctaagatttagttcctt 38834185  T
Q  335 tgc 337  Q
    |||    
T  38834186 tgc 38834188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 239 - 311
Target Start/End: Original strand, 1796057 - 1796130
Alignment:
Q  239 taaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaatttt 311  Q
    ||||||||| ||||| |||||||||||| ||||||||| || |||| || ||||||||||||||||||||||||    
T  1796057 taaagtgcatttttccacccctaactttcaaaaacttgcaactttggccacctaagtacaaaaactacaatttt 1796130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 239 - 331
Target Start/End: Complemental strand, 33160384 - 33160291
Alignment:
Q  239 taaagtgcacttttcacccctaactttt-aaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagccc 331  Q
    ||||||||||||||| ||||| | |||| ||||||||| ||||||  ||||||||||| | |||||||||||||  |||| |||||||||||||    
T  33160384 taaagtgcacttttccccccttaattttcaaaaacttgcaattttagccccctaagtatagaaactacaattttgaccccttaagatttagccc 33160291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 258 - 330
Target Start/End: Complemental strand, 2686479 - 2686407
Alignment:
Q  258 ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcc 330  Q
    |||||||||||||||||| |||||||| | | ||||||||||||||| |||||| | |||||| |||||||||    
T  2686479 ctaacttttaaaaacttgcaattttgatctcttaagtacaaaaactataattttggtcccctatgatttagcc 2686407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 277 - 337
Target Start/End: Complemental strand, 25524157 - 25524097
Alignment:
Q  277 aattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||| || ||||||||||||||||| ||||||  ||||||||||||||||||||||||    
T  25524157 aattttggcctcctaagtacaaaaactataattttgaccccctaagatttagcccctttgc 25524097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 36581013 - 36581085
Alignment:
Q  60 tgagttaactcaagttgggatttcaatatgatttttgcagaaatataactagcgtgaattaactcacgcagcg 132  Q
    |||||||| ||| |||||||||||||| | ||||||||| || |||||||||||||| |||| ||||||||||    
T  36581013 tgagttaattcacgttgggatttcaatgtcatttttgcataattataactagcgtgagttaattcacgcagcg 36581085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 5962668 - 5962579
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagc 329  Q
    ||||||||||||||  || || ||||| ||||| ||| |||||||  ||||||||||||||||||| |||||||||| ||||| |||||||    
T  5962668 taaagtgcacttttt-ccactgactttcaaaaatttgtaattttggtcccctaagtacaaaaactataattttagccacctaatatttagc 5962579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 317
Target Start/End: Original strand, 20214199 - 20214277
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagcccc 317  Q
    ||||||||||||||| ||| ||||||| ||||||||| ||||||  | | ||| ||||||||||||||||||| |||||    
T  20214199 taaagtgcacttttcccccttaactttcaaaaacttgcaattttagcactctatgtacaaaaactacaattttggcccc 20214277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 337
Target Start/End: Original strand, 18485136 - 18485247
Alignment:
Q  234 aaggttaaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaa-------ttttagccccctaagatt 325  Q
    |||| ||||||||||||||  ||| |||||||| ||||||||| ||||||| |||||||||||  ||||| ||||       |||| |||||||||||||    
T  18485136 aaggctaaagtgcactttttcccctctaactttaaaaaacttgcaattttggccccctaagtatcaaaacaacaattttgggttttggccccctaagatt 18485235  T
Q  326 tagcccctttgc 337  Q
    ||||||||||||    
T  18485236 tagcccctttgc 18485247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 330
Target Start/End: Original strand, 2186774 - 2186865
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcc 330  Q
    ||||||||| ||||  ||||||| ||| ||||| ||| |||||||  |  ||| ||||||||||||||||||||  ||||||||||||||||    
T  2186774 taaagtgcattttttccccctaagtttcaaaaagttgcaattttggtcttctatgtacaaaaactacaattttaatcccctaagatttagcc 2186865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 337
Target Start/End: Original strand, 16650043 - 16650094
Alignment:
Q  286 cccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||||||||||||||  ||| |||||||||| |||||||||    
T  16650043 cccctaagtacaaaaactacaattttgaccctctaagatttaacccctttgc 16650094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 18154497 - 18154586
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagc 329  Q
    ||||||| ||||||  ||||| |||||| ||||||||  |||||||||||| |||||||||||||||||||||| |||| |||| |||||||    
T  18154497 taaagtgaacttttttccccttaactttcaaaaacttacaattttgacccc-taagtacaaaaactacaatttt-gccctctaaaatttagc 18154586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 337
Target Start/End: Complemental strand, 1797370 - 1797296
Alignment:
Q  263 ttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||| ||||||| | || ||   ||||||||||||||||| | ||| |||||||||||||||||||    
T  1797370 ttttaaaaacttgcaattttggctccttataaacaaaaactacaattttggtcccttaagatttagcccctttgc 1797296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 34893686 - 34893739
Alignment:
Q  256 ccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaatt 309  Q
    |||||||||| ||||||||| ||||||| | ||||| |||||||||||||||||    
T  34893686 ccctaactttcaaaaacttgcaattttggctccctatgtacaaaaactacaatt 34893739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 2685764 - 2685820
Alignment:
Q  255 cccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaatttt 311  Q
    ||||||| ||| ||||||||  |||||||  ||||||||||||||||||||||||||    
T  2685764 cccctaattttcaaaaacttataattttggtcccctaagtacaaaaactacaatttt 2685820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 327
Target Start/End: Complemental strand, 21835016 - 21834928
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagattta 327  Q
    ||||||||||||||| ||  ||| ||| ||||| ||| || |||||||  ||| | |||||||||||||||||||| ||||| ||||||    
T  21835016 taaagtgcacttttcccctataagtttgaaaaagttgcaaatttgaccttctatgaacaaaaactacaattttagctccctacgattta 21834928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 310
Target Start/End: Original strand, 5730444 - 5730517
Alignment:
Q  239 taaagtgcacttttcacccc--taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattt 310  Q
    ||||||||||||||| ||||  ||||||| ||||||||| ||||||| |  ||||||||| ||||| |||||||    
T  5730444 taaagtgcacttttcccccccttaactttcaaaaacttgcaattttggcttcctaagtaccaaaaccacaattt 5730517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 337
Target Start/End: Complemental strand, 5730931 - 5730861
Alignment:
Q  267 aaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||  ||||||| |||||||||||| ||||| |||||||   |||||||||||||| |||| ||||    
T  5730931 aaaaacttccaattttggccccctaagtaccaaaaccacaatttagtccccctaagatttaaccccattgc 5730861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 24025366 - 24025313
Alignment:
Q  233 caaggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgacc 286  Q
    ||||| ||||||||||||||| ||||||| ||||||||  ||| ||||||||||    
T  24025366 caaggataaagtgcacttttcgcccctaagttttaaaattttgcaattttgacc 24025313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 38476778 - 38476725
Alignment:
Q  239 taaagtgcacttttcacccc-taacttttaaaaacttgaaattttgacccccta 291  Q
    |||||||||||||||||||| ||| ||||||||| |||  ||||||||||||||    
T  38476778 taaagtgcacttttcaccccttaagttttaaaaagttgtgattttgacccccta 38476725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 291
Target Start/End: Complemental strand, 31576671 - 31576607
Alignment:
Q  228 aaaaacaaggttaaagtgcacttttcacccc-taacttttaaaaacttgaaattttgacccccta 291  Q
    ||||| |||| |||||||||||||||||||| ||| ||||||||| |||  |||||| |||||||    
T  31576671 aaaaaaaaggctaaagtgcacttttcaccccttaagttttaaaaagttgcgattttgtcccccta 31576607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 7e-37; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 19750672 - 19750574
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  19750672 taaagtgcacttttcccccctaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttacccccctaagatttagccccattgc 19750574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 19789134 - 19789232
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  19789134 taaagtgcacttttcccccctaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttacccccctaagatttagccccattgc 19789232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 241 - 337
Target Start/End: Original strand, 31599794 - 31599891
Alignment:
Q  241 aagtgcactttt-cacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    |||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  31599794 aagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtcccctaagatttagcccctttgc 31599891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 228 - 337
Target Start/End: Complemental strand, 1835211 - 1835101
Alignment:
Q  228 aaaaacaaggttaaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagattt 326  Q
    |||||| ||| ||||||||||||||| | |||||||||| ||||||||| |||||||||||||||||||  ||||||||||||||  |||||||||||||    
T  1835211 aaaaactaggctaaagtgcacttttccatccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagattt 1835112  T
Q  327 agcccctttgc 337  Q
    |||||||||||    
T  1835111 agcccctttgc 1835101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 1290296 - 1290197
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||||| |||||| |||| |||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1290296 taaagtgcacttttccccccttaactttcaaaatcttgcaattttggccctctaagtacaaaaactacaattttagccccctaagatttaacccctttgc 1290197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 31601083 - 31600984
Alignment:
Q  239 taaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||  ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||| ||||||||||||| |||||    
T  31601083 taaagtgcactttttcccctctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgaccccttaagatttagcccatttgc 31600984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 226 - 333
Target Start/End: Complemental strand, 49308137 - 49308031
Alignment:
Q  226 ataaaaacaaggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatt 325  Q
    |||||||  ||| ||||||||||||||| ||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||| |||||||| ||||    
T  49308137 ataaaaaataggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaatttt-gccccctatgatt 49308039  T
Q  326 tagcccct 333  Q
    | ||||||    
T  49308038 ttgcccct 49308031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 239 - 331
Target Start/End: Complemental strand, 26421719 - 26421627
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagccc 331  Q
    ||||||||||||||| || |||||||| ||||||||| |||||||||| ||||||||||||||||||||||||  |||| |||||||||||||    
T  26421719 taaagtgcacttttcccctctaactttcaaaaacttgcaattttgacctcctaagtacaaaaactacaattttgaccccttaagatttagccc 26421627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 1963199 - 1963298
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||||| |||||| ||||| ||| ||||||| || |||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  1963199 taaagtgcacttttccccccttaactttcaaaaagttgcaattttggcctcctatgtacaaaaactacaattttagccccctaagaattagcccctttgc 1963298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 48780251 - 48780350
Alignment:
Q  239 taaagtgcacttttcacccc-taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||| ||||| |||||||   ||||||||||||||||||| ||||    
T  48780251 taaagtgcacttttccccccctaacttttaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgc 48780350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 17382996 - 17383094
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||  ||| |||||||||||||||||||||| |||||| |||| ||| |||||||||    
T  17382996 taaagtgcacttttctcccctaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggccccccaagaattatcccctttgc 17383094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 237 - 337
Target Start/End: Original strand, 8155739 - 8155839
Alignment:
Q  237 gttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgac-cccctaagtacaaaaactacaattttagccccctaagatttagccccttt 335  Q
    ||||||||||||||||| ||||||||||| ||||||||| ||||||  | ||||||||| |||||||||||||||| |||||||||||||||||| ||||    
T  8155739 gttaaagtgcacttttc-cccctaactttcaaaaacttgcaattttagctcccctaagttcaaaaactacaattttggccccctaagatttagccgcttt 8155837  T
Q  336 gc 337  Q
    ||    
T  8155838 gc 8155839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 227 - 330
Target Start/End: Complemental strand, 35935644 - 35935539
Alignment:
Q  227 taaaaacaaggtt-aaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagat 324  Q
    ||||||||||||| |||||||||||| | ||||| |||||||||||| ||| ||||||  ||||||||||||| ||||||||||||| ||||||||||||    
T  35935644 taaaaacaaggtttaaagtgcactttcccccccttaacttttaaaaatttgcaattttagccccctaagtacataaactacaattttggccccctaagat 35935545  T
Q  325 ttagcc 330  Q
    ||||||    
T  35935544 ttagcc 35935539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 234 - 329
Target Start/End: Complemental strand, 8758940 - 8758844
Alignment:
Q  234 aaggttaaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagc 329  Q
    ||||||||| |||||||||| ||||| |||||| ||||||||| ||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||    
T  8758940 aaggttaaaatgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggccccttaagatttagc 8758844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 239 - 335
Target Start/End: Complemental strand, 17388308 - 17388212
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagccccttt 335  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||  ||| |||||||| ||||||||||||| |||||| |||| |||||||||||    
T  17388308 taaagtgcacttttcccccctaactttcaaaaacttgcaattttggtcccttaagtacataaactacaattttggccccccaagaattagccccttt 17388212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 234 - 337
Target Start/End: Original strand, 5525358 - 5525461
Alignment:
Q  234 aaggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccct 333  Q
    |||| |||||| || ||||| ||||||||||| ||||||||| |||||||||||||||||||| ||||| |||||||   |||||||||||||||||||     
T  5525358 aaggctaaagtacatttttcccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagcccca 5525457  T
Q  334 ttgc 337  Q
    ||||    
T  5525458 ttgc 5525461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 13509456 - 13509358
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||| ||||||| ||||||||||||||||| ||| ||||||| ||||| |||||  ||||||||||||||   |||||||||||||||||||||||    
T  13509456 taaagtgtacttttcccccctaacttttaaaaaattgcaattttggccccccaagtatgaaaactacaattttgatcccctaagatttagcccctttgc 13509358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 1834122 - 1834222
Alignment:
Q  239 taaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttag-ccccctaagatttagcccctttg 336  Q
    ||||||||||||||| ||| |||||||| ||||||||  ||||||||||||||| ||| ||||||||||||||| | |||||||||||||||||| ||||    
T  1834122 taaagtgcacttttccccctctaactttaaaaaacttacaattttgaccccctatgtataaaaactacaattttggcccccctaagatttagcccatttg 1834221  T
Q  337 c 337  Q
    |    
T  1834222 c 1834222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 238 - 337
Target Start/End: Original strand, 12129625 - 12129725
Alignment:
Q  238 ttaaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttg 336  Q
    |||||||||||||||| || || |||||| ||||||||| ||||||| |||| ||||||||||||||||||||||  |||| ||||||||||||| ||||    
T  12129625 ttaaagtgcacttttcccctcttaactttcaaaaacttgcaattttggccccgtaagtacaaaaactacaattttgaccccttaagatttagcccatttg 12129724  T
Q  337 c 337  Q
    |    
T  12129725 c 12129725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 226 - 337
Target Start/End: Complemental strand, 21539182 - 21539070
Alignment:
Q  226 ataaaaacaaggttaaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagat 324  Q
    ||||||| ||||||||||  |||||||| |||| ||| ||||||||||||| ||||||| || |||||||  |||||||||||||||  |||||||||||    
T  21539182 ataaaaaaaaggttaaagcacacttttccacccttaatttttaaaaacttgcaattttggcctcctaagtgtaaaaactacaattttgaccccctaagat 21539083  T
Q  325 ttagcccctttgc 337  Q
    ||||| |||||||    
T  21539082 ttagctcctttgc 21539070  T

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Target: chr4; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 10471486 - 10471387
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||||| |||||| ||||||||| ||||||| |||||||||||| ||||| |||||||   ||||||||||||||||||| ||||    
T  10471486 taaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgc 10471387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 25684937 - 25685036
Alignment:
Q  239 taaagtgcacttttcacccc-taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| |||| ||||||| ||||||||| ||||||||||| |||||||| ||||| |||||||   ||||||||||||||||||| ||||    
T  25684937 taaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaatttagcccccctaagatttagccccattgc 25685036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 25685920 - 25685821
Alignment:
Q  239 taaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||| |||||||| ||||||||| ||||||| |||||||||||| ||||| |||||||   ||||||||||||||||||| ||||    
T  25685920 taaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagaccccctaagatttagccccattgc 25685821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 5526223 - 5526125
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| || |||||||| ||||||||| ||||||| |||||||||||  ||||| |||||||   ||||||||||||||||||| ||||    
T  5526223 taaagtgcacttttcccctctaactttcaaaaacttgcaattttggccccctaagtaacaaaaccacaatttagcccccctaagatttagccccattgc 5526125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 337
Target Start/End: Original strand, 10470544 - 10470648
Alignment:
Q  234 aaggttaaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    |||| ||||||||||||||| ||||| |||||| ||||||||| ||||||||||| |||||||| ||||  |||||||   |||||||||||||||||||    
T  10470544 aaggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccctctaagtaccaaaatcacaatttagcccccctaagatttagcccc 10470643  T
Q  333 tttgc 337  Q
     ||||    
T  10470644 attgc 10470648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 228 - 336
Target Start/End: Complemental strand, 27258068 - 27257960
Alignment:
Q  228 aaaaacaaggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagattta 327  Q
    ||||| |||| |||| ||||||||   ||| ||||||||||||| ||| ||||||||||| |||  |||||||||| |||||||| |||| |||||||||    
T  27258068 aaaaataaggataaaatgcactttctccccttaacttttaaaaagttgcaattttgaccctctatatacaaaaactccaattttaaccccttaagattta 27257969  T
Q  328 gcccctttg 336  Q
    |||||||||    
T  27257968 gcccctttg 27257960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 8757678 - 8757776
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||  ||| ||||||| ||||||||  ||||||  ||||||||||||| ||||||||||||| | ||| |||||||||||||| ||||    
T  8757678 taaagtgcactttttccccttaactttcaaaaacttacaattttagccccctaagtacagaaactacaattttggacccttaagatttagccccattgc 8757776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 13386636 - 13386531
Alignment:
Q  234 aaggttaaagtgcactttt--cacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagccc 331  Q
    |||| ||||||||||||||  | ||||||||||| ||||||||| |||||||||||| ||||||| ||||| |||||||   ||||||||||| ||||||    
T  13386636 aaggctaaagtgcactttttccccccctaactttcaaaaacttgcaattttgaccccataagtaccaaaaccacaatttagcccccctaagatctagccc 13386537  T
Q  332 ctttgc 337  Q
    | ||||    
T  13386536 cattgc 13386531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 35934347 - 35934444
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||  |||||||||| | ||| || |||||| ||||| |||||||||||||| ||||    
T  35934347 taaagtgcacttttc-cccctaactttcaaaaacttgtaattttggtcccctaagtaaagaaattataattttggccccttaagatttagccccattgc 35934444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 259 - 337
Target Start/End: Complemental strand, 46638802 - 46638724
Alignment:
Q  259 taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||| ||||| ||| |||||||| |||||| | ||||||| |||||||||||||||||||||||||| ||||||||    
T  46638802 taactttcaaaaagttggaattttgatcccctatgaacaaaaattacaattttagccccctaagatttagtccctttgc 46638724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 10447009 - 10447109
Alignment:
Q  239 taaagtgcacttttcacccc--taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttg 336  Q
    ||||||||||||||| |||   ||| ||| ||||| ||| ||||||  ||||||| |||||||||| ||||||||| |||||||||||||||||||||||    
T  10447009 taaagtgcacttttccccctcttaagtttcaaaaagttgcaattttagccccctatgtacaaaaaccacaattttacccccctaagatttagcccctttg 10447108  T
Q  337 c 337  Q
    |    
T  10447109 c 10447109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 337
Target Start/End: Original strand, 1289096 - 1289199
Alignment:
Q  235 aggttaaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccct 333  Q
    ||||||||||| ||||||| ||||| |||||| ||| | ||| |||||||| || ||||||| ||||||||||||||||||| | ||||||||| ||||     
T  1289096 aggttaaagtgaacttttccccccttaactttcaaatatttgtaattttgatcctctaagtataaaaactacaattttagcctcttaagatttaaccccc 1289195  T
Q  334 ttgc 337  Q
    ||||    
T  1289196 ttgc 1289199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 1964539 - 1964440
Alignment:
Q  239 taaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| |||| ||||||||||||| ||  ||||||| ||||||| | ||||||||||||||||| | ||| ||||| ||| |||||||||    
T  1964539 taaagtgcacttttccacccttaacttttaaaaagttacaattttggccccctatgaacaaaaactacaattttggtcccttaagaattatcccctttgc 1964440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 52491705 - 52491606
Alignment:
Q  239 taaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||| ||||||| |||| ||||||| ||||||||| |||||||  || |||| |||| ||||||||||||| ||||||||| |||||||||| ||||    
T  52491705 taaagtgtacttttccacccttaactttcaaaaacttgcaattttggtcctctaaatacagaaactacaattttggccccctaaaatttagccccattgc 52491606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 21178000 - 21178098
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||| ||||| | ||||||||||| | ||| ||| |||||||| |||||| | |||||||||||||||||  |||||||| ||||||||| |||||    
T  21178000 taaagtgtactttccccccctaactttcataaagttgcaattttgatcccctatgaacaaaaactacaattttgaccccctaaaatttagcccttttgc 21178098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 329
Target Start/End: Complemental strand, 37728666 - 37728572
Alignment:
Q  235 aggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagc 329  Q
    ||||||||||||| ||||  | ||||||||||||||| ||| ||||||| || |||| |||||||||||||||||||  |||  |||||||||||    
T  37728666 aggttaaagtgcattttttcctcctaacttttaaaaagttgcaattttggcctcctatgtacaaaaactacaattttgaccctttaagatttagc 37728572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 337
Target Start/End: Complemental strand, 33310168 - 33310088
Alignment:
Q  257 cctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||||||| ||||||  | |||||| ||||||||||| |||||| |||| ||| ||||||||| ||||||    
T  33310168 cctaacttttaaaaacttgtaattttagctccctaaatacaaaaactataattttggccctctatgatttagcctctttgc 33310088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 37576711 - 37576639
Alignment:
Q  60 tgagttaactcaagttgggatttcaatatgatttttgcagaaatataactagcgtgaattaactcacgcagcg 132  Q
    |||||||||||| |||| ||||||||| | ||||||||| || |||||||||||||  |||||||||||||||    
T  37576711 tgagttaactcacgttgagatttcaatgtcatttttgcataattataactagcgtgtgttaactcacgcagcg 37576639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 50909771 - 50909671
Alignment:
Q  239 taaagtgcacttttcac-ccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaatttt-agccccctaagatttagcccctttg 336  Q
    ||||||||||||||  | |||||| ||||||||| |||  |||||||| ||||| ||| ||||||||||||||| | |||| ||||||||||||||||||    
T  50909771 taaagtgcactttttccaccctaagttttaaaaagttgcgattttgactccctatgtataaaaactacaattttgacccccttaagatttagcccctttg 50909672  T
Q  337 c 337  Q
    |    
T  50909671 c 50909671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 55603632 - 55603549
Alignment:
Q  235 aggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccc 318  Q
    ||||||||||||||||||  ||| ||||||| ||||||||| |||||| | |||||  ||||||||||||| ||||| ||||||    
T  55603632 aggttaaagtgcactttttccccttaactttcaaaaacttgcaattttaatcccctgtgtacaaaaactactattttggccccc 55603549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 255 - 337
Target Start/End: Complemental strand, 10448341 - 10448259
Alignment:
Q  255 cccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||| ||| ||||| |||  |||||  ||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||    
T  10448341 cccctaagtttcaaaaagttgcgattttagccccctatgtacaaaaactacaattttggccctctaagatatagcccctttgc 10448259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 330
Target Start/End: Original strand, 13386017 - 13386111
Alignment:
Q  239 taaagtgcacttttcaccc-ctaacttttaaaaa-cttgaaattttgaccccctaagtacaaaaactacaattt-tagccccctaagatttagcc 330  Q
    ||||||||||||||| ||| |||||||| ||||| |||| ||||||| |||||||||||| ||||| ||||||| |  |||||||||||||||||    
T  13386017 taaagtgcacttttccccctctaactttcaaaaaacttgcaattttggccccctaagtaccaaaaccacaatttatccccccctaagatttagcc 13386111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 339
Target Start/End: Original strand, 14868888 - 14868992
Alignment:
Q  234 aaggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccct 333  Q
    |||| ||||||||||||||| |||||| |||| |||| |||| ||||||| ||| |||||||  ||||| |||| |||  |||||||||| ||||||||     
T  14868888 aaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaa-tttccccccctaagaattagcccca 14868986  T
Q  334 ttgctt 339  Q
    ||||||    
T  14868987 ttgctt 14868992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 339
Target Start/End: Complemental strand, 14877046 - 14876942
Alignment:
Q  234 aaggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccct 333  Q
    |||| ||||||||||||||| |||||| |||| |||| |||| ||||||| ||| |||||||  ||||| |||| |||  |||||||||| ||||||||     
T  14877046 aaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaa-tttccccccctaagaattagcccca 14876948  T
Q  334 ttgctt 339  Q
    ||||||    
T  14876947 ttgctt 14876942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 50909292 - 50909365
Alignment:
Q  255 cccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttag 328  Q
    ||||||| ||||||||| ||| |||||||||| ||||  || |||||||||||||||| || ||||||||||||    
T  50909292 cccctaagttttaaaaagttgcaattttgacctcctatatataaaaactacaattttaacctcctaagatttag 50909365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 239 - 311
Target Start/End: Original strand, 49306778 - 49306850
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaatttt 311  Q
    ||||||||||||||  |||| |||||| ||||||||| ||||||| ||   ||||||||||||||||||||||    
T  49306778 taaagtgcacttttttcccccaactttcaaaaacttgcaattttggccatttaagtacaaaaactacaatttt 49306850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 54110707 - 54110635
Alignment:
Q  257 cctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagc 329  Q
    ||||||||| ||||| ||| |||||||||| || | ||||||||| || |||||||||||||||| |||||||    
T  54110707 cctaactttaaaaaatttgcaattttgacctccaatgtacaaaaattataattttagccccctaaaatttagc 54110635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 3928961 - 3928857
Alignment:
Q  234 aaggttaaagtgcacttttcacccc-taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    |||| ||||||||||||||| |||| ||||||| ||||  |||  |||||| ||||||| |||  ||||| |||||||| |||| ||| | |||||||||    
T  3928961 aaggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccctatgtatgaaaaccacaattttggccctctatgttttagcccc 3928862  T
Q  333 tttgc 337  Q
    |||||    
T  3928861 tttgc 3928857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 48781148 - 48781045
Alignment:
Q  234 aaggttaaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    |||| ||||||||||||||| ||| |||||||| ||||| ||| |||||||   |||||||||| ||||| |||||||   |||||||| ||||||||||    
T  48781148 aaggctaaagtgcacttttccccctctaactttcaaaaatttgcaattttg-gtccctaagtactaaaaccacaatttagcccccctaaaatttagcccc 48781050  T
Q  333 tttgc 337  Q
     ||||    
T  48781049 attgc 48781045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 319
Target Start/End: Original strand, 55602370 - 55602459
Alignment:
Q  230 aaacaaggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccct 319  Q
    ||||||| |||||||||| ||||| ||  ||||||| ||||||||| ||||||   || |||  || ||||||||||||||||| |||||    
T  55602370 aaacaagtttaaagtgcatttttcccctttaactttcaaaaacttgcaattttagtcctctatatataaaaactacaattttagtcccct 55602459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 337
Target Start/End: Original strand, 3927664 - 3927768
Alignment:
Q  234 aaggttaaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    |||| ||||||||||||||| ||| |||||||||||||  |||  |||||| ||||| | |||  |||||||||||||| | || ||| | ||||||||     
T  3927664 aaggctaaagtgcacttttccccctctaacttttaaaatgttgcgattttggccccccatgtatgaaaactacaattttggtcctctatgttttagccca 3927763  T
Q  333 tttgc 337  Q
    |||||    
T  3927764 tttgc 3927768  T

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Target: chr1 (Bit Score: 77; Significance: 1e-35; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 235 - 335
Target Start/End: Original strand, 43058785 - 43058885
Alignment:
Q  235 aggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctt 334  Q
    |||||||||| |||||||  ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  43058785 aggttaaagtacactttttccccctaactttgaaaaacttgcaattttgaccccctaagtacaaaaactacaattttagccctctaagatttagcccctt 43058884  T
Q  335 t 335  Q
    |    
T  43058885 t 43058885  T

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Target: chr1; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 227 - 337
Target Start/End: Complemental strand, 24426185 - 24426074
Alignment:
Q  227 taaaaacaaggttaaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatt 325  Q
    |||||| |||||||||||||||||| | ||| |||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  24426185 taaaaataaggttaaagtgcactttcccccctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtcccctaagatt 24426086  T
Q  326 tagcccctttgc 337  Q
    ||||||| ||||    
T  24426085 tagccccattgc 24426074  T

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Target: chr1; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 39699864 - 39699766
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||||||||||| || |||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||    
T  39699864 taaagtgcacttttcccccctaactttcaataacttgcaattttgaccccctaagtacagaaactacaattttggccccctaagatttagccccattgc 39699766  T

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Target: chr1; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 24422803 - 24422902
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||  ||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  24422803 taaagtgcacttttacccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggccccctaagatttagccccattgc 24422902  T

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Target: chr1; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 234 - 330
Target Start/End: Original strand, 52274966 - 52275063
Alignment:
Q  234 aaggttaaagtgcactttt-cacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcc 330  Q
    |||| |||||||||||||| | ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  52274966 aaggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgggcccctaagatttagcc 52275063  T

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Target: chr1; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 226 - 337
Target Start/End: Original strand, 51684356 - 51684468
Alignment:
Q  226 ataaaaacaaggttaaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagat 324  Q
    |||||| || || ||||||||||||||| ||||| |||||||||||| ||| ||||||| ||||||| ||| ||||||||||||||| ||||||||||||    
T  51684356 ataaaatcatggctaaagtgcacttttccccccttaacttttaaaaagttgcaattttggccccctatgtataaaaactacaattttggccccctaagat 51684455  T
Q  325 ttagcccctttgc 337  Q
    |||||||||||||    
T  51684456 ttagcccctttgc 51684468  T

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Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 226 - 337
Target Start/End: Original strand, 52827337 - 52827449
Alignment:
Q  226 ataaaaacaaggttaaagtgcacttttcacccc-taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagat 324  Q
    ||||||| |||| ||||||||||||||| |||| ||||||| ||||||||| |||||||||||||||||||| ||||| ||||||| | |||||||||||    
T  52827337 ataaaaaaaaggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagat 52827436  T
Q  325 ttagcccctttgc 337  Q
    |||||||| ||||    
T  52827437 ttagccccattgc 52827449  T

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Target: chr1; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 36614002 - 36613903
Alignment:
Q  239 taaagtgcacttttca-cccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||| |||||  ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  36614002 taaagtgcatttttcctcccctaacttttaaaaacttgtaattttggccccctaagtacaaaaactacaattttgaccccctaagatttagcctctttgc 36613903  T

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Target: chr1; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 235 - 337
Target Start/End: Complemental strand, 45150072 - 45149969
Alignment:
Q  235 aggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaatttt-agccccctaagatttagcccct 333  Q
    ||||||||||||||||||| ||||||||||| ||||||||| ||||||| |||| ||||||||||||| ||||||||   ||||||||||||||||||||    
T  45150072 aggttaaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccttaagtacaaaaacaacaattttgccccccctaagatttagcccct 45149973  T
Q  334 ttgc 337  Q
    ||||    
T  45149972 ttgc 45149969  T

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Target: chr1; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 235 - 337
Target Start/End: Original strand, 50680331 - 50680433
Alignment:
Q  235 aggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctt 334  Q
    ||||||||||||| ||||| ||| ||||||  ||||||||| ||||||| ||||||||||| |||||||| |||||||| ||||||||||||| ||||||    
T  50680331 aggttaaagtgcatttttcccccttaacttccaaaaacttgcaattttggccccctaagtataaaaactataattttagtcccctaagatttaacccctt 50680430  T
Q  335 tgc 337  Q
    |||    
T  50680431 tgc 50680433  T

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Target: chr1; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 239 - 311
Target Start/End: Original strand, 14999288 - 14999360
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaatttt 311  Q
    ||||||| ||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  14999288 taaagtgtacttttcccccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttt 14999360  T

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Target: chr1; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 23980564 - 23980465
Alignment:
Q  239 taaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||| |||||||| ||||||||| ||||||| | |||||||||||||||||| |||||| | | |||||||||||||||||||||    
T  23980564 taaagtgcacttttccccctctaactttaaaaaacttgcaattttggctccctaagtacaaaaactataattttggtctcctaagatttagcccctttgc 23980465  T

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Target: chr1; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 43378815 - 43378712
Alignment:
Q  234 aaggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccct 333  Q
    |||||||||||||||||||| | | ||||||| ||||||||  |||||||| |||||||||||||||| |||||||||  || ||||||||||||| |||    
T  43378815 aaggttaaagtgcacttttctctcttaactttcaaaaacttacaattttgatcccctaagtacaaaaattacaattttgaccacctaagatttagcacct 43378716  T
Q  334 ttgc 337  Q
    ||||    
T  43378715 ttgc 43378712  T

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Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 41364832 - 41364930
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||||| |||||||| ||| ||||| |||||||   ||||||||||||||||||| ||||    
T  41364832 taaagtgcacttttctcccctaactttcaaaaacttgcaattttggccccctaaataccaaaaccacaatttagcccccctaagatttagccccattgc 41364930  T

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Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 33088720 - 33088616
Alignment:
Q  234 aaggttaaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    |||| ||||||||||||||| | | ||||| || ||||||||| |||||||||||  ||||||||||||||||||||||  | |||||||||||||||||    
T  33088720 aaggctaaagtgcacttttccctctctaacattcaaaaacttgcaattttgaccctttaagtacaaaaactacaattttgcctccctaagatttagcccc 33088621  T
Q  333 tttgc 337  Q
    |||||    
T  33088620 tttgc 33088616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 234 - 337
Target Start/End: Original strand, 35594215 - 35594317
Alignment:
Q  234 aaggttaaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    |||| ||||||||||||||| |||||||||||| ||||||||| |||||||| ||||||||||  |||||||||||||| | ||||||| ||||||||||    
T  35594215 aaggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttga-cccctaagtattaaaactacaatttt-gacccctaaaatttagcccc 35594312  T
Q  333 tttgc 337  Q
    |||||    
T  35594313 tttgc 35594317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 45157311 - 45157208
Alignment:
Q  234 aaggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccct 333  Q
    |||| ||||||||||||| | ||||||| ||| ||||||||| ||||||| ||||||| |||||||||||||||||||  |||  ||||||||| |||||    
T  45157311 aaggctaaagtgcactttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttgaccctttaagatttaacccct 45157212  T
Q  334 ttgc 337  Q
    ||||    
T  45157211 ttgc 45157208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 51685863 - 51685764
Alignment:
Q  239 taaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||| |||||||| ||||| |||  |||||| ||| ||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  51685863 taaagtgcacttttccccctctaactttcaaaaagttgcgattttggccctctatgtacaaaaactacaattttgaccccctaagatttagcccctttgc 51685764  T

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Target: chr1; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 235 - 337
Target Start/End: Complemental strand, 52276265 - 52276162
Alignment:
Q  235 aggttaaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccct 333  Q
    ||||||||||||||||| | ||  |||||||| ||||| ||| ||||||| |||||||||||||||||||| || ||||| ||||||||||||||||||     
T  52276265 aggttaaagtgcactttcccccttctaactttcaaaaatttgtaattttggccccctaagtacaaaaactataaatttagtcccctaagatttagcccca 52276166  T
Q  334 ttgc 337  Q
    ||||    
T  52276165 ttgc 52276162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 224 - 337
Target Start/End: Original strand, 11436030 - 11436144
Alignment:
Q  224 ttataaaaacaaggttaaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaag 322  Q
    ||||||||| |||| ||||||||||||||| ||| | |||||| ||||||||| ||||||| ||   |||||| ||||||||||||||| ||||||||||    
T  11436030 ttataaaaaaaaggctaaagtgcacttttccccctttaactttcaaaaacttgcaattttggccttttaagtataaaaactacaattttggccccctaag 11436129  T
Q  323 atttagcccctttgc 337  Q
    ||||| ||| |||||    
T  11436130 atttaacccatttgc 11436144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 239 - 327
Target Start/End: Complemental strand, 11437297 - 11437208
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagattta 327  Q
    ||||||||||||||  ||||| |||||| ||||||||| |||||||  ||| |||||||||||||||||||||| |||||||||||||||    
T  11437297 taaagtgcactttttcccccttaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggccccctaagattta 11437208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 39222572 - 39222472
Alignment:
Q  239 taaagtgcacttttcacccct--aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttg 336  Q
    ||||||||||||||  |||||  |||||| ||||||||| ||||||| ||||||||||| |||||||||||| ||||||| ||||||||| |||| ||||    
T  39222572 taaagtgcacttttaccccctttaactttcaaaaacttgcaattttggccccctaagtataaaaactacaatgttagccctctaagattttgcccatttg 39222473  T
Q  337 c 337  Q
    |    
T  39222472 c 39222472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 39153219 - 39153115
Alignment:
Q  234 aaggttaaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    |||||||||||||||||||  ||||| || ||| ||||||||| ||||||| |||| || |||||||||||||||||||  ||| |||||||||| ||||    
T  39153219 aaggttaaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccctctaagatttaacccc 39153120  T
Q  333 tttgc 337  Q
    |||||    
T  39153119 tttgc 39153115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 35067100 - 35067001
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||||| || ||| ||||| |||  |||||| ||||||| | ||||||||||||||||| ||||||||| |||||||||||||||    
T  35067100 taaagtgcacttttccccccttaagtttcaaaaagttgcgattttggccccctatgaacaaaaactacaattttggccccctaatatttagcccctttgc 35067001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 258 - 329
Target Start/End: Complemental strand, 43060084 - 43060013
Alignment:
Q  258 ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagc 329  Q
    |||||||| ||||| |||||||||||||||| ||||||||||||||||||||||  |||| |||||||||||    
T  43060084 ctaactttcaaaaatttgaaattttgaccccttaagtacaaaaactacaattttgaccccttaagatttagc 43060013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 45148584 - 45148682
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||  || || |||||| ||||||||| ||||||| ||||||||||| |||||||||||||||  |||||||||||||| |||||||||    
T  45148584 taaagtgcactttttcccgcttaactttcaaaaacttgcaattttggccccctaagta-aaaaactacaattttgcccccctaagatttaacccctttgc 45148682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 337
Target Start/End: Complemental strand, 52828172 - 52828069
Alignment:
Q  235 aggttaaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccct 333  Q
    ||||||||||||||||||| ||| |||| ||| ||||||||| ||||||| | |||||||||| ||||| |||||||   |||||||||||||||||||     
T  52828172 aggttaaagtgcacttttccccctctaattttcaaaaacttgcaattttggctccctaagtaccaaaaccacaatttagcccccctaagatttagcccca 52828073  T
Q  334 ttgc 337  Q
    ||||    
T  52828072 ttgc 52828069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 7675556 - 7675458
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||| ||||| ||||  ||||||| ||||||||| ||||||| || |||||||| ||||| || ||||||  ||||||||||||||||||||||||    
T  7675556 taaagtgtactttccacctttaactttcaaaaacttgcaattttgccctcctaagtaaaaaaattataattttgaccccctaagatttagcccctttgc 7675458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 235 - 337
Target Start/End: Original strand, 7983049 - 7983151
Alignment:
Q  235 aggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctt 334  Q
    ||||||||||||||||||| ||| ||||||| || |||||| ||||||| ||||||| |||  ||||| ||||||||  |||||||||||||| |||| |    
T  7983049 aggttaaagtgcacttttctcccgtaactttcaacaacttgcaattttggccccctatgtatcaaaaccacaattttgcccccctaagatttatccccat 7983148  T
Q  335 tgc 337  Q
    |||    
T  7983149 tgc 7983151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 239 - 311
Target Start/End: Original strand, 7674531 - 7674602
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaatttt 311  Q
    |||||||| |||||| ||||||||||||||||||||| |||||||   |||||||||||||||||||||||||    
T  7674531 taaagtgcccttttcccccctaacttttaaaaacttgcaattttg-ggccctaagtacaaaaactacaatttt 7674602  T

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Target: chr1; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 37526980 - 37526877
Alignment:
Q  234 aaggttaaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    |||||||||||| ||||||| ||||| |||||| ||||||||| ||||||| | |||||| || | |||| |||||||| ||||| ||||||||||||||    
T  37526980 aaggttaaagtgtacttttccccccttaactttcaaaaacttgcaattttggctccctaaatatagaaaccacaattttggcccc-taagatttagcccc 37526882  T
Q  333 tttgc 337  Q
    |||||    
T  37526881 tttgc 37526877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 228 - 330
Target Start/End: Original strand, 39698555 - 39698657
Alignment:
Q  228 aaaaacaaggttaaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagattt 326  Q
    ||||| |||| ||||||||||||| | ||||| |||||||||||||||  ||||||| ||||||||||||| |||||| |||||| | || |||||||||    
T  39698555 aaaaaaaaggctaaagtgcactttaccccccttaacttttaaaaactttcaattttggccccctaagtacagaaactataatttt-ggccactaagattt 39698653  T
Q  327 agcc 330  Q
    ||||    
T  39698654 agcc 39698657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 35595291 - 35595191
Alignment:
Q  239 taaagtgcacttttcaccc-ctaacttttaaaaactt-gaaattttgaccccctaagtacaaaaacta-caattttagccccctaagatttagccccttt 335  Q
    ||||||| ||||||| ||| |||||||| |||||||| | ||||||||||||||| ||| |||||||| ||||||| ||||| |||||||||||||||||    
T  35595291 taaagtgtacttttccccctctaactttaaaaaacttagcaattttgaccccctatgtataaaaactaacaattttggcccc-taagatttagccccttt 35595193  T
Q  336 gc 337  Q
    ||    
T  35595192 gc 35595191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 15000035 - 14999983
Alignment:
Q  256 ccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaat 308  Q
    |||||||||||||||||||| |||||||| ||||||||||||||| |||||||    
T  15000035 ccctaacttttaaaaacttgcaattttgatcccctaagtacaaaatctacaat 14999983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 341
Target Start/End: Original strand, 33088089 - 33088173
Alignment:
Q  257 cctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgcttct 341  Q
    ||||||||| ||||||||| |||||| | | ||||| || ||||||||||||||||  ||| ||||||||||||| |||||||||    
T  33088089 cctaactttcaaaaacttgtaatttttatctcctaaatataaaaactacaattttattcccttaagatttagcccatttgcttct 33088173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 337
Target Start/End: Original strand, 36612851 - 36612954
Alignment:
Q  234 aaggttaaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    |||| ||||||||| ||||| ||||| |||||| ||||| ||| |||||||   |  ||||||||||||||||||||||| ||||||||||||||| |||    
T  36612851 aaggctaaagtgcatttttccccccttaactttcaaaaatttgcaattttggatct-taagtacaaaaactacaattttaaccccctaagatttagtccc 36612949  T
Q  333 tttgc 337  Q
    |||||    
T  36612950 tttgc 36612954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 41366233 - 41366130
Alignment:
Q  234 aaggttaaagtgcacttttcacc-cctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    |||| ||||||||||||||| || ||||||||| |||||| || ||||||  |||| ||||||  ||||| ||||||| |||||||||||||||||||||    
T  41366233 aaggctaaagtgcacttttcccctcctaactttcaaaaacatgcaattttagccccttaagtatcaaaaccacaattt-agccccctaagatttagcccc 41366135  T
Q  333 tttgc 337  Q
     ||||    
T  41366134 attgc 41366130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 337
Target Start/End: Original strand, 39151930 - 39152033
Alignment:
Q  235 aggttaaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccct 333  Q
    ||||||||||||| ||||  ||||| || ||| ||||||||| ||||||| ||||||| |||||||||||||||||||  | |  ||||||||| |||||    
T  39151930 aggttaaagtgcattttttcccccttaagtttcaaaaacttgtaattttggccccctatgtacaaaaactacaattttgactctttaagatttaacccct 39152029  T
Q  334 ttgc 337  Q
    ||||    
T  39152030 ttgc 39152033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 330
Target Start/End: Original strand, 44404466 - 44404537
Alignment:
Q  259 taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcc 330  Q
    ||||||| ||||||| | ||||||  |||||||||||||||||||| |||||| ||||||||| ||||||||    
T  44404466 taactttcaaaaactagcaattttagccccctaagtacaaaaactataattttggccccctaaaatttagcc 44404537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 330
Target Start/End: Original strand, 46066530 - 46066617
Alignment:
Q  241 aagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcc 330  Q
    ||||||||||||| | ||||||||| ||||| |||  |||||  |||| || ||||||||||||||||||||| ||||||||||||||||    
T  46066530 aagtgcacttttc-ctcctaactttcaaaaagttgcgattttagccccttatgtacaaaaactacaattttag-cccctaagatttagcc 46066617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 27039412 - 27039340
Alignment:
Q  60 tgagttaactcaagttgggatttcaatatgatttttgcagaaatataactagcgtgaattaactcacgcagcg 132  Q
    |||||||||||| |||||||||||||| | |||||||  ||| ||||| | |||||| |||||||||||||||    
T  27039412 tgagttaactcacgttgggatttcaatgtaatttttgttgaattataatttgcgtgagttaactcacgcagcg 27039340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 139
Target Start/End: Complemental strand, 42883238 - 42883159
Alignment:
Q  60 tgagttaactcaagttgggatttcaatatgatttttgcagaaa-tataactagcgtgaattaactcacgcagcgataatat 139  Q
    |||||||||| | ||||||||| ||||||||||||| || ||| |||||||||||||| ||||||||||||| || |||||    
T  42883238 tgagttaacttacgttgggatt-caatatgattttttcaaaaaatataactagcgtgagttaactcacgcagggacaatat 42883159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 12390079 - 12389981
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||| ||||| | ||| |||||| ||||| |||  ||||||| |||||| ||||||||| || |||||| |||||||| ||||||||||||||||    
T  12390079 taaagtgcatttttccctccttaactttcaaaaagttgcgattttgatcccctatgtacaaaaattataattttggcccccta-gatttagcccctttgc 12389981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 337
Target Start/End: Original strand, 25652737 - 25652816
Alignment:
Q  258 ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    |||| ||| ||||||||| |||||||| ||| |||||||||||| || || ||| |||| |||||||||||||| |||||    
T  25652737 ctaattttcaaaaacttgcaattttgatcccttaagtacaaaaattataaatttggcccgctaagatttagcccatttgc 25652816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 337
Target Start/End: Complemental strand, 44412016 - 44411965
Alignment:
Q  286 cccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||||||||||||||| |||  |||||||||| ||||||||    
T  44412016 cccctaagtacaaaaactacaattttacccctttaagatttaggccctttgc 44411965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 336
Target Start/End: Original strand, 45156051 - 45156150
Alignment:
Q  238 ttaaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttg 336  Q
    ||||||| ||||||||  |||| || ||| ||||||||  ||||||||||  ||| |||||||||||||||||||| ||| |||||||||| || |||||    
T  45156051 ttaaagttcacttttcctcccttaagtttcaaaaacttacaattttgaccttctatgtacaaaaactacaattttaaccctctaagatttaacctctttg 45156150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 311
Target Start/End: Original strand, 11190388 - 11190461
Alignment:
Q  239 taaagtgcacttttcacccc-taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaatttt 311  Q
    |||||||||||||||||||| ||| ||||||||| ||| |||||||   |||||  |||||||||| |||||||    
T  11190388 taaagtgcacttttcaccccttaaattttaaaaagttgcaattttggttccctatatacaaaaactgcaatttt 11190461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 329
Target Start/End: Complemental strand, 30249589 - 30249497
Alignment:
Q  238 ttaaagtgcacttttcacccc-taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagc 329  Q
    |||||||||||| ||| | || ||||||| ||||| ||| |||||||| |   || |||||||||||||||||||  |||| |||||||||||    
T  30249589 ttaaagtgcactcttccctccgtaactttcaaaaagttgtaattttgatcttttatgtacaaaaactacaattttgaccccttaagatttagc 30249497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 307
Target Start/End: Original strand, 48441085 - 48441137
Alignment:
Q  255 cccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaa 307  Q
    ||||||| ||||||||| ||| |||||||||||| ||| || |||||||||||    
T  48441085 cccctaagttttaaaaaattgcaattttgaccccttaaataaaaaaactacaa 48441137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 236 - 337
Target Start/End: Complemental strand, 1829704 - 1829602
Alignment:
Q  236 ggttaaagtgcacttttcacccc-taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctt 334  Q
    |||||||||||||||||  |||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  1829704 ggttaaagtgcacttttttccccctaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttggccccctaagatttagcccctt 1829605  T
Q  335 tgc 337  Q
    |||    
T  1829604 tgc 1829602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 249 - 337
Target Start/End: Complemental strand, 10786000 - 10785912
Alignment:
Q  249 ttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||| ||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  10786000 ttttcccccctaacttttaaaaatttgcaattttaaccccctaagtacaaaaactacaattttaaccccttaagatttagcccctttgc 10785912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 10784595 - 10784695
Alignment:
Q  239 taaagtgcacttttcacccc--taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttg 336  Q
    ||||||||||||||| | ||  ||||||||||||||||| |||||| |||||||||||| ||||||||||||||| |||||| |||||||||||||||||    
T  10784595 taaagtgcacttttccctcccttaacttttaaaaacttgcaattttaaccccctaagtataaaaactacaattttggcccccaaagatttagcccctttg 10784694  T
Q  337 c 337  Q
    |    
T  10784695 c 10784695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 239 - 339
Target Start/End: Complemental strand, 27322165 - 27322065
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgct 338  Q
    ||||||||||||||| |||||| |||| |||| |||| ||||||| |||||||||||| ||||| ||||||||  |||||||||| ||||||||||||||    
T  27322165 taaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttccccccctaagaattagcccctttgct 27322066  T
Q  339 t 339  Q
    |    
T  27322065 t 27322065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 8659268 - 8659367
Alignment:
Q  239 taaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||| |||||||| ||||||||| ||||||| |||||||||||| ||||| |||||||   ||||||||||||||||||| ||||    
T  8659268 taaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgc 8659367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 16704595 - 16704496
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    |||||||||||||||  |||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||   ||  |||||||||||| ||||||    
T  16704595 taaagtgcacttttcctcccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgatcctttaagatttagcctctttgc 16704496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 258 - 337
Target Start/End: Complemental strand, 26575132 - 26575053
Alignment:
Q  258 ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    |||||||| ||||||||| |||||| ||||| |||||||||||||||||||||| ||||||||||||||| | |||||||    
T  26575132 ctaactttcaaaaacttgcaattttaaccccttaagtacaaaaactacaattttggccccctaagatttaactcctttgc 26575053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 337
Target Start/End: Original strand, 3721610 - 3721714
Alignment:
Q  234 aaggttaaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    |||| ||||||||||||||| ||| |||||||| ||||||||| |||||||||||||||||||| ||||| | |||||   |||| ||||||||||||||    
T  3721610 aaggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccataatttagaccccttaagatttagcccc 3721709  T
Q  333 tttgc 337  Q
     ||||    
T  3721710 attgc 3721714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 7314883 - 7314981
Alignment:
Q  239 taaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||| |||||||| ||||||||| ||||||| |||| ||||||  ||||| ||||||||  ||||||||||||||||||||||||    
T  7314883 taaagtgcacttttccccctctaactttcaaaaacttgcaattttggcccc-taagtatcaaaacaacaattttgaccccctaagatttagcccctttgc 7314981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 7316392 - 7316293
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||||| |||||| ||||||||| ||||||| |||||||| ||   |||| |||||||| ||||| |||||||||||||||||||    
T  7316392 taaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaaatattgaaaccacaattttggccccttaagatttagcccctttgc 7316293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 8821876 - 8821967
Alignment:
Q  239 taaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagc 329  Q
    ||||||||||||||| ||| |||||||| ||||||||| ||||||| |||||||||||| ||||| |||||||   ||||||||||||||||    
T  8821876 taaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagc 8821967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 328
Target Start/End: Original strand, 14822366 - 14822453
Alignment:
Q  242 agtgcacttttcacccctaactttt-aaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttag 328  Q
    |||||||||||||||||| | |||| ||||||||| ||||||| |||| |||||| | ||||||||||||| ||||||||||||||||    
T  14822366 agtgcacttttcaccccttaattttcaaaaacttgcaattttggccccataagtatagaaactacaattttggccccctaagatttag 14822453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 334
Target Start/End: Original strand, 16703573 - 16703666
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctt 334  Q
    ||||||||||||||| |||||| |||| ||||||||| |||||||| ||  ||| |||||||||||||||||||||||||||| ||||| ||||||    
T  16703573 taaagtgcacttttc-cccctatctttcaaaaacttgcaattttgatcca-taaatacaaaaactacaattttagccccctaaaatttaacccctt 16703666  T

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Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 337
Target Start/End: Complemental strand, 34834681 - 34834578
Alignment:
Q  235 aggttaaagtgcacttttcac-ccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccct 333  Q
    ||||||||||||||||||| | |||||||||| ||||||||| |||||||| | ||||||||  ||||| |||||||   |||||||||||||||||||     
T  34834681 aggttaaagtgcacttttccctccctaactttcaaaaacttgcaattttgatctcctaagtatcaaaaccacaatttagcccccctaagatttagcccca 34834582  T
Q  334 ttgc 337  Q
    ||||    
T  34834581 ttgc 34834578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 239 - 331
Target Start/End: Complemental strand, 8822891 - 8822798
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagccc 331  Q
    ||||||||||||||| | | | |||||| ||||||||| |||||||||||||||||||| ||||| |||||||   ||||||||||||||||||    
T  8822891 taaagtgcacttttccctctttaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagccc 8822798  T

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Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 329
Target Start/End: Complemental strand, 8660306 - 8660211
Alignment:
Q  234 aaggttaaagtgcacttttcacc-cctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagc 329  Q
    |||| ||||||||||||||| || ||||||||| ||||||||| |||||||||||| ||||||| ||||| |||||||   ||||||||||||||||    
T  8660306 aaggctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttgacccc-taagtaccaaaaccacaatttagcccccctaagatttagc 8660211  T

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Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 12350823 - 12350898
Alignment:
Q  260 aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttg 336  Q
    |||||| | ||||||| |||||||||||| || ||| |||||||||||||||| |||||||||||||||||||||||    
T  12350823 aactttaataaacttgcaattttgacccc-tatgtataaaaactacaattttaaccccctaagatttagcccctttg 12350898  T

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Target: chr6; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 27437831 - 27437930
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||||| |||||| ||||| ||| ||||||| |||||||   | |||||||||||||||  |||||||||||||||| |||||||    
T  27437831 taaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgaccccctaagatttagctcctttgc 27437930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 3333129 - 3333025
Alignment:
Q  234 aaggttaaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    |||| |||| |||||||||| ||  |||| ||| ||||| |||  |||||| ||||||| |||||||||||||||||||| ||| |||| ||||||||||    
T  3333129 aaggctaaattgcacttttccccttctaagtttgaaaaagttgcgattttggccccctatgtacaaaaactacaattttaaccctctaaaatttagcccc 3333030  T
Q  333 tttgc 337  Q
    |||||    
T  3333029 tttgc 3333025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 310
Target Start/End: Complemental strand, 3722605 - 3722533
Alignment:
Q  239 taaagtgcacttttcac-ccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattt 310  Q
    ||||||||||||||| | |||||||||| ||||||||| ||||||||||| |||||||| ||||| |||||||    
T  3722605 taaagtgcacttttccctccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaattt 3722533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 14823674 - 14823583
Alignment:
Q  239 taaagtgcacttttcacccc--taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttag 328  Q
    ||||||||||||||  ||||  ||| ||| ||||||||| ||||||  |||| |||||||| ||||||||||||| ||||||||||||||||    
T  14823674 taaagtgcacttttttcccccttaattttaaaaaacttgcaattttagccccttaagtacagaaactacaattttggccccctaagatttag 14823583  T

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Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 253 - 337
Target Start/End: Original strand, 26574637 - 26574720
Alignment:
Q  253 cacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    |||| |||||||| ||||||||| |||||||| || ||||||||||||||||| |||||   ||| |||||||||||||||||||    
T  26574637 cacctctaactttcaaaaacttgcaattttgaacctctaagtacaaaaactac-attttgatcccttaagatttagcccctttgc 26574720  T

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Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 12382809 - 12382710
Alignment:
Q  239 taaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||| |||| ||||||||| ||| |||||||||||||||||||  ||||||| ||||||   |||| |||||||| ||| |||||    
T  12382809 taaagtgcacttttccacctctaatttttaaaaatttgtaattttgaccccctaagtattaaaactataattttgatccccaaagatttaacccttttgc 12382710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 337
Target Start/End: Original strand, 17496817 - 17496900
Alignment:
Q  255 cccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttag-ccccctaagatttagcccctttgc 337  Q
    ||||||||||| ||||||||  |||||| |||| ||||||||||||||| ||||||| | |||||||||||||| || ||||||    
T  17496817 cccctaactttcaaaaacttacaattttaaccctctaagtacaaaaactgcaattttggcccccctaagatttaacctctttgc 17496900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 313
Target Start/End: Complemental strand, 6842381 - 6842306
Alignment:
Q  239 taaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttag 313  Q
    ||||||||||||||| ||| |||| ||| ||||| ||| ||||||| ||||||| || ||||||||||||||||||    
T  6842381 taaagtgcacttttccccctctaagtttcaaaaagttgcaattttggccccctatgtgcaaaaactacaattttag 6842306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 339
Target Start/End: Original strand, 27318318 - 27318420
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattt--tagccccctaagatttagcccctttg 336  Q
    |||||||||| |||  |||||| |||| |||| |||| ||||||| |||||||||||| ||||| |||||||     |||||||||| ||||||||||||    
T  27318318 taaagtgcaccttttccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttcccccccccctaagaattagcccctttg 27318417  T
Q  337 ctt 339  Q
    |||    
T  27318418 ctt 27318420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 30495794 - 30495696
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagcccc-ctaagatttagcccctttgc 337  Q
    ||||||||||||||  ||||||||||| ||||| |||  ||||| | |||||| |||||||||  |||||||| ||||| |||||||||||||| |||||    
T  30495794 taaagtgcacttttt-cccctaactttcaaaaagttgcgattttaatcccctatgtacaaaaataacaattttggcccctctaagatttagcccatttgc 30495696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 3333152 - 3333250
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||| ||||||| ||  ||| ||| ||||| ||| || |||||||||||| | | |||||||| |||||| || ||||| ||||||||| ||||||    
T  3333152 taaagtgaacttttcccctataagtttgaaaaaattgcaaatttgaccccctatgaataaaaactataattttggctccctacgatttagcctctttgc 3333250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 337
Target Start/End: Original strand, 5658757 - 5658858
Alignment:
Q  237 gttaaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagccccttt 335  Q
    ||||||||||| ||||| ||||| || ||||||||| ||  ||||||    ||||| |||||||||||||||||||   ||| ||||||||||||| |||    
T  5658757 gttaaagtgcatttttccccccttaagttttaaaaagttataattttagttccctatgtacaaaaactacaattttgatcccttaagatttagcccattt 5658856  T
Q  336 gc 337  Q
    ||    
T  5658857 gc 5658858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 337
Target Start/End: Original strand, 29473075 - 29473179
Alignment:
Q  234 aaggttaaagtgcacttttcacccc-taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    |||||| ||||||||||||| |||| ||| ||||||||| ||| |||||||   ||||| | |||||||  |||||||| |||| | |||| || |||||    
T  29473075 aaggttcaagtgcacttttccccccttaagttttaaaaagttgcaattttggttccctatgaacaaaaataacaattttggccctccaagaattggcccc 29473174  T
Q  333 tttgc 337  Q
    |||||    
T  29473175 tttgc 29473179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 3e-33; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 54540893 - 54540789
Alignment:
Q  234 aaggttaaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    |||| ||||||||||||||| ||||| |||||| ||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  54540893 aaggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttggccccctaagatttagcccc 54540794  T
Q  333 tttgc 337  Q
    |||||    
T  54540793 tttgc 54540789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 230 - 337
Target Start/End: Complemental strand, 46721327 - 46721219
Alignment:
Q  230 aaacaaggttaaagtgcacttttcacccc-taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttag 328  Q
    |||||||| ||||||||||||||| |||| ||||||||||||| |||  ||||| |||||||| ||||||||||||||||||||| ||||||||||||||    
T  46721327 aaacaaggctaaagtgcacttttctccccctaacttttaaaaagttgcgattttaaccccctatgtacaaaaactacaattttagtcccctaagatttag 46721228  T
Q  329 cccctttgc 337  Q
    |||||||||    
T  46721227 cccctttgc 46721219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 7267643 - 7267738
Alignment:
Q  235 aggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcc 330  Q
    ||||||||||||||||||| ||| ||||||| ||||||||| ||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||    
T  7267643 aggttaaagtgcacttttcccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggccccctaagatttagcc 7267738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 239 - 336
Target Start/End: Original strand, 7758405 - 7758503
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttg 336  Q
    ||||||||||||||  ||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  7758405 taaagtgcactttttcccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttttgccccctaagatttaacccctttg 7758503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 29931229 - 29931328
Alignment:
Q  239 taaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||||  |||||||| |||||||||||||||||| ||||||||||||||| |||||||||    
T  29931229 taaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccccctaagatttaacccctttgc 29931328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 29980383 - 29980482
Alignment:
Q  239 taaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||||  |||||||| |||||||||||||||||| ||||||||||||||| |||||||||    
T  29980383 taaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccccctaagatttaacccctttgc 29980482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 51037539 - 51037637
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||| ||||||| ||||| ||| ||||||||||| ||| | ||||||||||||||||||||||||||||| |||||||||||||    
T  51037539 taaagtgcacttttctcccttaactttcaaaaagttgcaattttgaccctctatgaacaaaaactacaattttagccccctaagaattagcccctttgc 51037637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 12703602 - 12703499
Alignment:
Q  234 aaggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccct 333  Q
    |||| ||||||||||||||  || |||||||| ||||| ||| ||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||     
T  12703602 aaggctaaagtgcactttttccctctaactttcaaaaatttgtaattttggccccctaagtacaaaaactacaattttggccccctatgatttagcccca 12703503  T
Q  334 ttgc 337  Q
    ||||    
T  12703502 ttgc 12703499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 22776910 - 22776811
Alignment:
Q  239 taaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| |||||||||||| | ||| ||| ||||||| ||||||| ||||||||||||||||||| ||||||||||| |||||||||||||    
T  22776910 taaagtgcacttttccacccctaactttcagaaagttgcaattttggccccctatgtacaaaaactacaattttggccccctaagaattagcccctttgc 22776811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 235 - 337
Target Start/End: Complemental strand, 7268928 - 7268826
Alignment:
Q  235 aggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctt 334  Q
    ||||||||||||||||||| ||||||||||| ||||||||| ||||||| || |||||||| | ||||||||||||| ||| |||||||||||| ||| |    
T  7268928 aggttaaagtgcacttttcccccctaactttcaaaaacttgcaattttggcctcctaagtatagaaactacaattttggcctcctaagatttagtcccat 7268829  T
Q  335 tgc 337  Q
    |||    
T  7268828 tgc 7268826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 239 - 330
Target Start/End: Original strand, 8456481 - 8456572
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcc 330  Q
    ||||||||||||||  ||||||| ||| ||||||||| |||||||  ||||||| |||||||||||||||||| ||||||||||||||||||    
T  8456481 taaagtgcactttttccccctaattttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggccccctaagatttagcc 8456572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 239 - 330
Target Start/End: Original strand, 12700178 - 12700268
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcc 330  Q
    ||||||||||||| | ||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||  ||||||| |||||||||    
T  12700178 taaagtgcactttcc-cccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgaccccctatgatttagcc 12700268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 240 - 338
Target Start/End: Original strand, 24516464 - 24516563
Alignment:
Q  240 aaagtgcactttt-cacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgct 338  Q
    ||||||||||||| | ||||||||||| ||||||||| ||||||| | ||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||    
T  24516464 aaagtgcactttttcccccctaactttaaaaaacttgcaattttggcaccctaagtataaaaactacaattttggccccttaagatttagctcctttgct 24516563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 47609700 - 47609799
Alignment:
Q  239 taaagtgcacttttcacccc-taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    |||| |||||||||| |||| ||||||| ||||||||| |||||||||||||||||||| ||||| ||||||| | ||||||||||||||||||| ||||    
T  47609700 taaaatgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagccccattgc 47609799  T

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Target: chr3; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 235 - 337
Target Start/End: Complemental strand, 47610682 - 47610579
Alignment:
Q  235 aggttaaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccct 333  Q
    ||||||||||||||||||| ||| |||||||| ||||||||| ||||||| |||||||||||| ||||| |||||||   |||||||||||||||||||     
T  47610682 aggttaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagcccca 47610583  T
Q  334 ttgc 337  Q
    ||||    
T  47610582 ttgc 47610579  T

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Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 239 - 330
Target Start/End: Original strand, 534502 - 534594
Alignment:
Q  239 taaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcc 330  Q
    ||||||||||||||  ||| |||||| | ||||||||| |||||||||| |||| ||||||||||||||||||| ||||||||||||||||||    
T  534502 taaagtgcactttttcccctctaactctcaaaaacttgcaattttgacctcctatgtacaaaaactacaattttggccccctaagatttagcc 534594  T

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Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 29932801 - 29932698
Alignment:
Q  234 aaggttaaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    |||| ||||||||||||||| ||| |||||||| ||||||||| ||||||| |||| ||||||||||||||||||||||  |||| |||||||||| |||    
T  29932801 aaggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggcccc-taagtacaaaaactacaattttgaccccttaagatttagtccc 29932703  T
Q  333 tttgc 337  Q
    |||||    
T  29932702 tttgc 29932698  T

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Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 29981955 - 29981852
Alignment:
Q  234 aaggttaaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    |||| ||||||||||||||| ||| |||||||| ||||||||| ||||||| |||| ||||||||||||||||||||||  |||| |||||||||| |||    
T  29981955 aaggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggcccc-taagtacaaaaactacaattttgaccccttaagatttagtccc 29981857  T
Q  333 tttgc 337  Q
    |||||    
T  29981856 tttgc 29981852  T

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Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 234 - 329
Target Start/End: Original strand, 54539753 - 54539849
Alignment:
Q  234 aaggttaaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagc 329  Q
    |||| ||||||||||||||| |||| ||||||| ||||||||| |||||| ||||||||| ||||||||||||||||||   |||||||||||||||    
T  54539753 aaggctaaagtgcacttttccacccttaactttcaaaaacttgcaattttaaccccctaaatacaaaaactacaattttgatcccctaagatttagc 54539849  T

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Target: chr3; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 47614188 - 47614287
Alignment:
Q  239 taaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||  ||| |||||||| ||||||||| ||||||| |||||||||||  ||||| |||||||| |||||||||||||||||| ||||||    
T  47614188 taaagtgcactttttcccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccctaagatttagcctctttgc 47614287  T

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Target: chr3; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 51469975 - 51470074
Alignment:
Q  239 taaagtgcacttttcac-ccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| | |||||| ||| ||||||||| ||||||| |||||||||||| ||||| ||||||| | ||||||||||||||||||| ||||    
T  51469975 taaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttaacccccctaagatttagccccattgc 51470074  T

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Target: chr3; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 239 - 339
Target Start/End: Complemental strand, 5029780 - 5029680
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgct 338  Q
    ||||||||||||||| |||||| |||| |||| |||| ||||||| || ||||||||| ||||| ||||||||  |||||||||| |||||||| |||||    
T  5029780 taaagtgcacttttcccccctatctttcaaaatcttgcaattttggcctcctaagtaccaaaaccacaatttttcccccctaagaattagccccattgct 5029681  T
Q  339 t 339  Q
    |    
T  5029680 t 5029680  T

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Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 19984852 - 19984951
Alignment:
Q  239 taaagtgcacttttcacccc-taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| |||| ||| ||| ||||||||| ||||||| ||||||| |||||||||||||||||||  |||  ||||||||| |||||||||    
T  19984852 taaagtgcacttttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttgaccctttaagatttaacccctttgc 19984951  T

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Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 46719944 - 46720043
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||| ||||| ||||| |||||||||||| |||  |||||| ||||||| ||| ||||||||||||||||| || |||||||||||||| |||||    
T  46719944 taaagtgcatttttccccccttaacttttaaaaagttgcgattttggccccctatgtataaaaactacaattttagtcctctaagatttagcccatttgc 46720043  T

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Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 51038888 - 51038789
Alignment:
Q  239 taaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| |||| ||||||||||||| ||| ||||||||||||||| | ||||||||||||||||| | ||| ||||| ||  |||||||||    
T  51038888 taaagtgcacttttccacccttaacttttaaaaagttgcaattttgaccccctatgaacaaaaactacaattttggtcccttaagaattgtcccctttgc 51038789  T

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Target: chr3; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 236 - 337
Target Start/End: Complemental strand, 23770508 - 23770406
Alignment:
Q  236 ggttaaagtgcacttttcacccctaacttttaaaaacttga-aattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctt 334  Q
    |||||||||||| ||||| ||||| | |||||||||  | | |||||||  ||| || ||||||||||||||||||||||||||||||||||| ||||||    
T  23770508 ggttaaagtgcaattttctccccttaattttaaaaaagttacaattttggtcccttatgtacaaaaactacaattttagccccctaagatttaacccctt 23770409  T
Q  335 tgc 337  Q
    |||    
T  23770408 tgc 23770406  T

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Target: chr3; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 262 - 337
Target Start/End: Original strand, 31645000 - 31645075
Alignment:
Q  262 cttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    |||| ||||||||  ||||||| |||||||||| ||||||||||||||||| || ||||||||||||||| |||||    
T  31645000 ctttcaaaaacttacaattttggccccctaagtgcaaaaactacaattttaacctcctaagatttagcccatttgc 31645075  T

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Target: chr3; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 49216250 - 49216341
Alignment:
Q  239 taaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagc 329  Q
    ||||||||||||||| || ||||| ||| ||||| ||| ||||||||||||||| ||||||||||||||||| |  |||| |||||||||||    
T  49216250 taaagtgcacttttccacgcctaagtttcaaaaagttgcaattttgaccccctatgtacaaaaactacaattatgtccccttaagatttagc 49216341  T

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Target: chr3; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 51470552 - 51470462
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagc-cccctaagatttagc 329  Q
    ||||||||||| ||| ||||||||||| ||||||||| ||||| || ||||||||||| ||||| |||| |||||| |||||||||||||||    
T  51470552 taaagtgcactcttcccccctaactttcaaaaacttgcaatttagatcccctaagtaccaaaaccacaa-tttagcacccctaagatttagc 51470462  T

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Target: chr3; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 55192097 - 55191994
Alignment:
Q  234 aaggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccct 333  Q
    |||| ||||||| | ||| | ||| ||||||| ||||||||| ||||||| ||| ||||||||||||||||||||||| |||||  |||| ||| |||||    
T  55192097 aaggctaaagtgtattttccccccttaactttcaaaaacttgcaattttggccctctaagtacaaaaactacaattttggcccctcaagaattaacccct 55191998  T
Q  334 ttgc 337  Q
    ||||    
T  55191997 ttgc 55191994  T

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Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 329
Target Start/End: Complemental strand, 34019222 - 34019152
Alignment:
Q  259 taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagc 329  Q
    ||||||| ||||||||| ||||||||||||||| ||||||| ||||||||||| | ||||||| |||||||    
T  34019222 taactttcaaaaacttgcaattttgaccccctaggtacaaacactacaattttggtcccctaaaatttagc 34019152  T

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Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 53901484 - 53901403
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaa 321  Q
    ||||||||||||||| ||||||| ||| ||||| ||| ||||||||| || ||||||||||||||||||| || |||||||||    
T  53901484 taaagtgcacttttc-cccctaagtttaaaaaagttgcaattttgactccttaagtacaaaaactacaatgttggccccctaa 53901403  T

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Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 239 - 331
Target Start/End: Complemental strand, 535880 - 535787
Alignment:
Q  239 taaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagccc 331  Q
    ||||||| ||||||| |||||||||||| ||||||||| |||||||  ||| ||||||  ||||||| ||||||  ||||||||||||||||||    
T  535880 taaagtgtacttttccacccctaactttcaaaaacttgcaattttggtcccttaagtattaaaactataattttcaccccctaagatttagccc 535787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 328
Target Start/End: Original strand, 6170286 - 6170363
Alignment:
Q  249 ttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttag 328  Q
    ||||||||| ||||||| ||||||||| |||||||| ||| |||||||||||| ||||||||||  ||| ||||||||||    
T  6170286 ttttcacccataactttcaaaaacttgcaattttgatcccttaagtacaaaaattacaatttta--cccttaagatttag 6170363  T

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Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 330
Target Start/End: Original strand, 8875909 - 8876001
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcc 330  Q
    ||||||||||||||||||||| || ||  |||||  || ||||||  |||| || ||||||||||||||||||| ||||||||||||||||||    
T  8875909 taaagtgcacttttcaccccttaagttcgaaaaagctgcaattttagccccttatgtacaaaaactacaattttggccccctaagatttagcc 8876001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 337
Target Start/End: Original strand, 52839035 - 52839139
Alignment:
Q  234 aaggttaaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    |||| ||||||||| ||||| ||| |||||||  ||||| ||| ||||||||||| |||||||| ||||| ||||||||| ||| |||| ||||||||||    
T  52839035 aaggctaaagtgcaattttccccctctaacttccaaaaatttgtaattttgaccctctaagtaccaaaacaacaattttacccctctaaaatttagcccc 52839134  T
Q  333 tttgc 337  Q
     ||||    
T  52839135 attgc 52839139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 52840702 - 52840603
Alignment:
Q  239 taaagtgcacttttca-cccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    |||||||| ||||||  ||||||||||| ||||||||| ||||||| | |||||| ||  ||||| ||||||||  ||||||||||||||||||| ||||    
T  52840702 taaagtgcccttttcctcccctaactttcaaaaacttgcaattttggctccctaattatcaaaacaacaattttgtccccctaagatttagccccattgc 52840603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 53616114 - 53616015
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    |||||||||||||||  |||| |||||||||| ||||| |||||| |  || || |||||||||||||||||| ||||||| |||| ||||| |||||||    
T  53616114 taaagtgcacttttcctcccttaacttttaaacacttgtaattttaattccttatgtacaaaaactacaatttcagccccccaagaattagctcctttgc 53616015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 239 - 335
Target Start/End: Complemental strand, 11671438 - 11671342
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagccccttt 335  Q
    ||||||||||||||  | ||||||||| ||||||||| ||||||  |||||||| || ||||||||||  |||  ||||||| |||||| |||||||    
T  11671438 taaagtgcactttttccgcctaactttcaaaaacttgcaattttagccccctaaatataaaaactacagatttgaccccctatgatttaaccccttt 11671342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 33148973 - 33148902
Alignment:
Q  60 tgagttaactcaagttgggatttcaatatgatttttgcagaaatataactagcgtgaattaactcacgcagcg 132  Q
    |||||||||||| ||||| |||||||| | |||||||||||| |||||||||||||| |||| ||||| ||||    
T  33148973 tgagttaactcacgttgg-atttcaatgtcatttttgcagaattataactagcgtgacttaagtcacgtagcg 33148902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 312
Target Start/End: Original strand, 6249623 - 6249686
Alignment:
Q  249 ttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaatttta 312  Q
    |||||| || ||||||| ||||||||| |||||| | ||| |||||||||||||||||||||||    
T  6249623 ttttcatccataactttcaaaaacttgcaattttaatcccttaagtacaaaaactacaatttta 6249686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 336
Target Start/End: Complemental strand, 40426877 - 40426778
Alignment:
Q  239 taaagtgcacttttcacccc-taacttttaaaaacttg-aaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttg 336  Q
    ||||||||||||||| |||| ||||||| ||||| ||| |||||| | |||| ||  |||||||| ||||||||| |||||||| |||||||| ||||||    
T  40426877 taaagtgcacttttccccccttaactttaaaaaagttgcaaatttcggccccttatatacaaaaattacaattttggccccctatgatttagctcctttg 40426778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 327
Target Start/End: Original strand, 52104478 - 52104569
Alignment:
Q  233 caaggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagattta 327  Q
    |||||||||| |||||||||| ||||||||||| ||||| ||| |||||||  ||  || |||||||||||| |||||| ||| |||||||||||    
T  52104478 caaggttaaaatgcacttttc-cccctaactttcaaaaagttgtaattttggtcc--tatgtacaaaaactataattttggccacctaagattta 52104569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 54987108 - 54987006
Alignment:
Q  234 aaggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccct 333  Q
    |||||||||||||||||||| ||||||| ||| ||||| |||  |||||   |||||| ||| |||||||| ||||||  ||| |||||||||||| |||    
T  54987108 aaggttaaagtgcacttttc-cccctaagtttcaaaaagttgcgattttagtcccctatgtataaaaactataattttgaccctctaagatttagctcct 54987010  T
Q  334 ttgc 337  Q
    ||||    
T  54987009 ttgc 54987006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 19986170 - 19986069
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgacccc--ctaagtacaaaaactacaattttagccccctaagatttagccccttt 335  Q
    ||||||||||||||| || || || ||| ||||||||| ||||||| ||||  ||| ||| |||||||||||||||  ||| |||||||||| |||||||    
T  19986170 taaagtgcacttttcccctcttaagtttcaaaaacttgcaattttggcccctcctatgtataaaaactacaattttgaccctctaagatttaaccccttt 19986071  T
Q  336 gc 337  Q
    ||    
T  19986070 gc 19986069  T

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Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 28262196 - 28262294
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||||||||||| ||||  |||  |||||| ||||| | |||  ||||| |||||||| |||||||| | ||||||||| ||||    
T  28262196 taaagtgcacttttcccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagccccattgc 28262294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 310
Target Start/End: Original strand, 5001190 - 5001275
Alignment:
Q  226 ataaaaacaaggttaaagtgcacttttca-cccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattt 310  Q
    |||||||  ||| |||||||||||||||  |||||| |||| |||| |||| ||||||| |||||||||||| ||||| |||||||    
T  5001190 ataaaaaataggctaaagtgcacttttcctcccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 5001275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 4970037 - 4969977
Alignment:
Q  66 aactcaagttgggatttcaatatgatttttgcagaaatataactagcgtgaattaactcac 126  Q
    |||||| |||||||||| ||| |||||||||||||| |||||||| ||||| |||| ||||    
T  4970037 aactcacgttgggattttaatgtgatttttgcagaattataactaacgtgagttaattcac 4969977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 28263209 - 28263110
Alignment:
Q  239 taaagtgcacttttcacccc-taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| |||| ||||||||||||  |||  |||||| ||||| | |||  ||||| |||||||| |||||||| | ||||||||| ||||    
T  28263209 taaagtgcacttttccccccctaacttttaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagccccattgc 28263110  T

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Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 47615646 - 47615591
Alignment:
Q  239 taaagtgcacttttcacccc-taacttttaaaaacttgaaattttgaccccctaag 293  Q
    ||||||||||||||| |||| ||||||| ||||||||| ||||||| |||||||||    
T  47615646 taaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaag 47615591  T

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Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 268 - 337
Target Start/End: Original strand, 55191544 - 55191612
Alignment:
Q  268 aaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccct-aagatttagcccctttgc 337  Q
    |||||||| ||||||||| |||||| ||||||||||| ||||||  ||| || ||||||||||||||||||    
T  55191544 aaaacttgcaattttgacaccctaaatacaaaaactataatttt--ccctctcaagatttagcccctttgc 55191612  T

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Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 337
Target Start/End: Original strand, 4271464 - 4271542
Alignment:
Q  259 taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||| ||||| ||| |||||||| | | ||| || ||||||||||||||||||  | ||||||||||||| |||||    
T  4271464 taactttcaaaaatttgtaattttgatctcttaaatataaaaactacaattttagcatcttaagatttagcccatttgc 4271542  T

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Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 291
Target Start/End: Original strand, 26633351 - 26633416
Alignment:
Q  226 ataaaaacaaggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgacccccta 291  Q
    ||||| |||||| |||| |||||||||| ||||||| ||||||||  |||  ||||||||||||||    
T  26633351 ataaatacaaggctaaactgcacttttcgcccctaagttttaaaatgttgcgattttgacccccta 26633416  T

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Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 271
Target Start/End: Original strand, 49398121 - 49398162
Alignment:
Q  230 aaacaaggttaaagtgcacttttcacccctaacttttaaaaa 271  Q
    |||||||||||||||||||||||| ||| ||| |||||||||    
T  49398121 aaacaaggttaaagtgcacttttcccccttaagttttaaaaa 49398162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 6250649 - 6250585
Alignment:
Q  263 ttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagattta 327  Q
    ||||||||| |||  ||||||  |||||| |||||||| ||| ||||||||||| ||||||||||    
T  6250649 ttttaaaaaattgtgattttggtcccctatgtacaaaacctaaaattttagccctctaagattta 6250585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 337
Target Start/End: Complemental strand, 47615608 - 47615576
Alignment:
Q  305 caattttagccccctaagatttagcccctttgc 337  Q
    ||||||| |||||||||||||||||||||||||    
T  47615608 caattttggccccctaagatttagcccctttgc 47615576  T

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Target: chr7 (Bit Score: 72; Significance: 1e-32; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 235 - 337
Target Start/End: Complemental strand, 42886388 - 42886285
Alignment:
Q  235 aggttaaagtgcacttttcacc-cctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccct 333  Q
    ||||||||||||||||||| || ||||||||| ||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  42886388 aggttaaagtgcacttttctcctcctaactttcaaaaatttgcaattttgaccccctaaatacaaaaactacaattttagccccctaagatttagcccat 42886289  T
Q  334 ttgc 337  Q
    ||||    
T  42886288 ttgc 42886285  T

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Target: chr7; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 31659625 - 31659725
Alignment:
Q  239 taaagtgcactttt--cacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttg 336  Q
    ||||||||||||||  | ||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  31659625 taaagtgcacttttaccccccctaactttcaaaaacttacaattttgaccccctaagtacaaaaactacaattttggccccctaagatttagccccattg 31659724  T
Q  337 c 337  Q
    |    
T  31659725 c 31659725  T

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Target: chr7; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 241 - 337
Target Start/End: Complemental strand, 14999249 - 14999154
Alignment:
Q  241 aagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||| ||||||| |||| |||||||| |||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||    
T  14999249 aagtgcacttttcccccctaa-ttttcaaaacttgcaattttgaccccctaaatacaaaaactacaattttggcgccctaagatttagcccctttgc 14999154  T

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Target: chr7; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 249 - 336
Target Start/End: Complemental strand, 18372544 - 18372457
Alignment:
Q  249 ttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttg 336  Q
    ||||| ||||||| ||| ||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18372544 ttttcccccctaattttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccctaagatttagcccctttg 18372457  T

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Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 234 - 337
Target Start/End: Original strand, 7500453 - 7500556
Alignment:
Q  234 aaggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccct 333  Q
    |||| ||||||||||||||| ||| ||||||| ||||||||| |||||||| || ||||||| | |||| |||||||| |||||||||||||||||||||    
T  7500453 aaggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttgatcctctaagtatagaaaccacaattttggccccctaagatttagcccct 7500552  T
Q  334 ttgc 337  Q
    ||||    
T  7500553 ttgc 7500556  T

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Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 17781664 - 17781763
Alignment:
Q  239 taaagtgcacttttcacccc-taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| |||| ||||||| ||||||||| |||||||||||||||||||| ||||| ||||||| | ||||||||||||||||||| ||||    
T  17781664 taaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagccccattgc 17781763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 18371427 - 18371518
Alignment:
Q  239 taaagtgcacttttcacc-cctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagc 329  Q
    ||||||||||||||| || ||||||||| ||||||||| ||||||| |||| |||||||||||||||||||||| |||||||||||||||||    
T  18371427 taaagtgcacttttcccctcctaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttggccccctaagatttagc 18371518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 239 - 336
Target Start/End: Complemental strand, 22630550 - 22630452
Alignment:
Q  239 taaagtgcacttttcacccc-taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttg 336  Q
    ||||||||||||||| | || ||||||| ||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||| |||| |||||    
T  22630550 taaagtgcacttttccctccataactttcaaaaacttgcaattttggccccctaattacaaaaactacaattttagccccctaagattcagcctctttg 22630452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 239 - 331
Target Start/End: Original strand, 127340 - 127431
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagccc 331  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||  ||||||||||| ||||| |||| |||||||||||||||||||||||    
T  127340 taaagtgcacttttcccccctaactttcaaaaacttgcaattttggtcccctaagtaccaaaaccacaa-tttagccccctaagatttagccc 127431  T

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Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 267 - 337
Target Start/End: Original strand, 22629518 - 22629588
Alignment:
Q  267 aaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||| ||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22629518 aaaaacttgtaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagcccctttgc 22629588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 7501950 - 7501851
Alignment:
Q  239 taaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||| |||||||| ||||||||| ||||||| |||||||||||  ||||| |||||||| ||||| |||||| ||||||||||||    
T  7501950 taaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccttaagatgtagcccctttgc 7501851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 239 - 331
Target Start/End: Complemental strand, 17782651 - 17782558
Alignment:
Q  239 taaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagccc 331  Q
    ||||||||||||||| ||| |||||||| ||||||||| ||||||| |||||||||||| ||||| |||||||   ||||||||||||||||||    
T  17782651 taaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccc 17782558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 128704 - 128600
Alignment:
Q  234 aaggttaaagtgcacttttcacccc-taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    |||||||||||||||||||| | || ||||||| ||||| ||| |||||||||||||||||||| ||||| |||||||   |||||||||||| ||||||    
T  128704 aaggttaaagtgcacttttcccaccataactttcaaaaatttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagattcagcccc 128605  T
Q  333 tttgc 337  Q
     ||||    
T  128604 attgc 128600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 3227692 - 3227593
Alignment:
Q  239 taaagtgcacttttcacccc-taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagc-cccctaagatttagcccctttg 336  Q
    ||||||||||||||| |||| ||||||| ||||||||| ||||||| |||||||||||| ||||| |||| |||||| |||||||||||||||||| |||    
T  3227692 taaagtgcacttttccccccctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaa-tttagcacccctaagatttagccccattg 3227594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 3227111 - 3227209
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccc-taagatttagcccctttgc 337  Q
    ||||||||||||| | ||||||| ||| ||||||||| ||||||| |||||||||||| ||||| |||| |||||||||| |||||||||||||| ||||    
T  3227111 taaagtgcactttccccccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaa-tttagcccccttaagatttagccccattgc 3227209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 31949325 - 31949424
Alignment:
Q  239 taaagtgcacttttcac-ccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| | |||||| ||| ||||||||| ||||||| |||||||||||| ||||| |||||||   ||||||||||||||||||| ||||    
T  31949325 taaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgc 31949424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 227 - 337
Target Start/End: Original strand, 47369772 - 47369883
Alignment:
Q  227 taaaaacaaggttaaagtgcacttttca-cccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatt 325  Q
    |||||| |||| |||| |||||||||   ||||||||||| ||||||||| ||||||  || | ||||||||||||||| |||||| ||||| |||||||    
T  47369772 taaaaaaaaggctaaaatgcactttttttcccctaactttcaaaaacttgcaattttagcctcataagtacaaaaactataattttggccccttaagatt 47369871  T
Q  326 tagcccctttgc 337  Q
    ||||||||||||    
T  47369872 tagcccctttgc 47369883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 48935001 - 48934902
Alignment:
Q  239 taaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||| ||||| |||||||||||| ||||||||| ||||||||||| |||||||||||||||| ||||||   |||| |||| ||||||| |||||    
T  48935001 taaagtgcatttttccacccctaactttcaaaaacttgtaattttgaccctctaagtacaaaaactaaaattttgatcccccaagaattagcccatttgc 48934902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 21505419 - 21505516
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||||||||||| ||||| |||  |||||| ||||| |  ||||||||||||||||||  |||| |||||||||||||||||||    
T  21505419 taaagtgcacttttc-cccctaactttcaaaaagttgcgattttggcccccgatatacaaaaactacaattttgaccccataagatttagcccctttgc 21505516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 5060997 - 5060925
Alignment:
Q  60 tgagttaactcaagttgggatttcaatatgatttttgcagaaatataactagcgtgaattaactcacgcagcg 132  Q
    ||||||||||||  |||| |||||||| |||||||||||||| ||||||||| |||| |||||||||||||||    
T  5060997 tgagttaactcacattggaatttcaatgtgatttttgcagaattataactagtgtgagttaactcacgcagcg 5060925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 11662654 - 11662550
Alignment:
Q  234 aaggttaaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    |||||||||||||| ||||| ||||| |||||| ||||||||| ||||||  | | ||| |||||||||||| |||||| |||||| |||| ||||||||    
T  11662654 aaggttaaagtgcatttttccccccttaactttcaaaaacttgcaattttagctctctatgtacaaaaactataattttggccccccaagaattagcccc 11662555  T
Q  333 tttgc 337  Q
    |||||    
T  11662554 tttgc 11662550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 47525465 - 47525366
Alignment:
Q  239 taaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||| |||||||| ||||||||| ||||||  |||||||||||  ||||| |||||||   ||||||||||||||||||| ||||    
T  47525465 taaagtgcacttttccccctctaactttcaaaaacttgcaattttagccccctaagtatcaaaaccacaatttagcccccctaagatttagccccattgc 47525366  T

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Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 228 - 307
Target Start/End: Complemental strand, 20163665 - 20163585
Alignment:
Q  228 aaaaacaaggttaaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaa 307  Q
    ||||| |||| |||||||||||| || |||||||||||| ||||||||| ||||||| | ||||| |||||||||||||||    
T  20163665 aaaaaaaaggctaaagtgcacttctccacccctaactttcaaaaacttgcaattttggctccctatgtacaaaaactacaa 20163585  T

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Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 31949900 - 31949801
Alignment:
Q  239 taaagtgcacttttcacccc-taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagc-cccctaagatttagcccctttg 336  Q
    ||||||||||| ||| |||| ||||||| ||||||||| ||||||| |||||||| ||| ||||| |||| |||||| |||||||||||||||||| |||    
T  31949900 taaagtgcactcttccccccctaactttcaaaaacttgcaattttggccccctaaataccaaaaccacaa-tttagcacccctaagatttagccccattg 31949802  T

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Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 46482600 - 46482699
Alignment:
Q  239 taaagtgcacttttcacc-cctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||| ||||| || ||||| ||| ||||| ||| || |||||||||||| |||||||||||| |||||||  ||||||||||||| | |||||||    
T  46482600 taaagtgcatttttctcctcctaattttcaaaaatttgtaaatttgaccccctatgtacaaaaactataattttaatcccctaagatttatctcctttgc 46482699  T

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Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 336
Target Start/End: Original strand, 11658382 - 11658480
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttg 336  Q
    |||| |||||||||| ||||| |||||| |||||| || ||||||  ||||||| ||||||||||||||||||| | |||  |||| ||||||||||||    
T  11658382 taaattgcacttttccccccttaactttcaaaaacatgcaattttagccccctatgtacaaaaactacaattttggtccctcaagaattagcccctttg 11658480  T

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Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 30439455 - 30439357
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    |||||||||||||   ||| ||||||| ||||| ||   |||||||   |||| || |||||||||||||||||| |||||||||||||||||||||||    
T  30439455 taaagtgcactttctccccttaactttcaaaaagttacgattttgatttcctatgttcaaaaactacaattttagtcccctaagatttagcccctttgc 30439357  T

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Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 34174080 - 34174010
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaatt 309  Q
    ||||||||||||||| |||||| |||| |||| |||| ||||||| |||||||||||| ||||| ||||||    
T  34174080 taaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatt 34174010  T

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Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 293
Target Start/End: Complemental strand, 46483609 - 46483551
Alignment:
Q  235 aggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaag 293  Q
    ||||||||||||||||||| ||  ||||||||||||||||| |||||||| ||||||||    
T  46483609 aggttaaagtgcacttttcccctttaacttttaaaaacttgtaattttgatcccctaag 46483551  T

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Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 597364 - 597309
Alignment:
Q  255 cccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaatttt 311  Q
    ||||||||||| |||||||||||||||||| | | ||||||||||||||||||||||    
T  597364 cccctaactttcaaaaacttgaaattttga-cgcataagtacaaaaactacaatttt 597309  T

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Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 327
Target Start/End: Complemental strand, 31661118 - 31661018
Alignment:
Q  228 aaaaacaaggttaaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagattt 326  Q
    ||||| |||| ||||||||||||| | | | |||||||| ||||| ||| |||||||||||  || |||||||||||| |||||||| ||||||| ||||    
T  31661118 aaaaaaaaggctaaagtgcactttcccctctctaactttcaaaaatttgcaattttgaccctttacgtacaaaaactataattttagtcccctaaaattt 31661019  T
Q  327 a 327  Q
    |    
T  31661018 a 31661018  T

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Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 47524532 - 47524599
Alignment:
Q  243 gtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaatt 309  Q
    ||||||||||| ||| |||||||| ||||||||| ||||||| |||||||||||| ||||| ||||||    
T  47524532 gtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatt 47524599  T

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Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 311
Target Start/End: Complemental strand, 43900590 - 43900513
Alignment:
Q  234 aaggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaatttt 311  Q
    |||||||||||||||||||| |  |||||||||||||| ||| |||||||   |||||| || |||||||||| ||||    
T  43900590 aaggttaaagtgcacttttctcttctaacttttaaaaatttgtaattttggttccctaaatataaaaactacagtttt 43900513  T

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Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 34351512 - 34351587
Alignment:
Q  255 cccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcc 330  Q
    ||||| ||||| ||||||||| ||||||| | | | ||||| | |||||||||||||| |||| ||||||||||||    
T  34351512 cccctgactttcaaaaacttgcaattttggctctccaagtatagaaactacaattttaaccccttaagatttagcc 34351587  T

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Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 337
Target Start/End: Original strand, 14998048 - 14998082
Alignment:
Q  303 tacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||| |||||||||||||||||||||||||    
T  14998048 tacaattttggccccctaagatttagcccctttgc 14998082  T

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Target: chr8 (Bit Score: 69; Significance: 6e-31; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 237 - 337
Target Start/End: Complemental strand, 29968436 - 29968336
Alignment:
Q  237 gttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttg 336  Q
    ||||||||||||||||| ||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||| | | |||||||||||||||||| |||    
T  29968436 gttaaagtgcacttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattctggtcccctaagatttagccccattg 29968337  T
Q  337 c 337  Q
    |    
T  29968336 c 29968336  T

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Target: chr8; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 226 - 337
Target Start/End: Original strand, 30335629 - 30335741
Alignment:
Q  226 ataaaaacaaggttaaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagat 324  Q
    |||||||||||| ||||||||| ||||| |||| ||||||||||||||||| ||||||| | | ||||||||||||| |||||||||| |||||||||||    
T  30335629 ataaaaacaaggctaaagtgcatttttccacccttaacttttaaaaacttgcaattttggctcgctaagtacaaaaattacaattttaaccccctaagat 30335728  T
Q  325 ttagcccctttgc 337  Q
    |||||||||||||    
T  30335729 ttagcccctttgc 30335741  T

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Target: chr8; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 234 - 335
Target Start/End: Complemental strand, 22221467 - 22221365
Alignment:
Q  234 aaggttaaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    |||| ||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||  ||||||||||||||  |||||||||||||||||||    
T  22221467 aaggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccc 22221368  T
Q  333 ttt 335  Q
    |||    
T  22221367 ttt 22221365  T

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Target: chr8; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 234 - 335
Target Start/End: Complemental strand, 22227809 - 22227707
Alignment:
Q  234 aaggttaaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    |||| ||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||  ||||||||||||||  |||||||||||||||||||    
T  22227809 aaggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccc 22227710  T
Q  333 ttt 335  Q
    |||    
T  22227709 ttt 22227707  T

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Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 5513985 - 5514083
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||  ||||||||||| ||||||||  ||||||| |||||||||||||||||||||||||||  |||||||| |||||||||||||||    
T  5513985 taaagtgcacttttaccccctaactttcaaaaacttccaattttggccccctaagtacaaaaactacaattttgcccccctaaaatttagcccctttgc 5514083  T

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Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 24122886 - 24122976
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagc 329  Q
    ||||||||| ||||| ||||||||||| ||||| ||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  24122886 taaagtgcatttttcccccctaactttaaaaaatttgcaattttgaccccctaagtacaaaaactataattttagtcccctaagatttagc 24122976  T

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Target: chr8; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 233 - 337
Target Start/End: Original strand, 8388461 - 8388564
Alignment:
Q  233 caaggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    ||||| ||||||||||||| | ||||||||||||||||| ||| ||||||  ||||||| |||||||||||| |||||| ||||||||||||||||||||    
T  8388461 caaggctaaagtgcactttcc-cccctaacttttaaaaagttgcaattttagccccctatgtacaaaaactataattttggccccctaagatttagcccc 8388559  T
Q  333 tttgc 337  Q
    |||||    
T  8388560 tttgc 8388564  T

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Target: chr8; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 245 - 337
Target Start/End: Original strand, 18978029 - 18978121
Alignment:
Q  245 gcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||| ||||||||||| |||| |||  ||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  18978029 gcacttttcccccctaactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttggccccttaagatttagcccctttgc 18978121  T

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Target: chr8; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 10006347 - 10006446
Alignment:
Q  239 taaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||| |||||||| ||||||||| ||||||| |||||||||||  ||||| |||||||| |||||||||||||||||||||||||    
T  10006347 taaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccctaagatttagcccctttgc 10006446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 12353462 - 12353360
Alignment:
Q  234 aaggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccct 333  Q
    |||| ||||||||||||||| ||| ||||||| ||||||||| ||||||| |||||||||||| ||||||| |||||| ||||||||||||||||||||     
T  12353462 aaggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttggccccctaagtac-aaaactataattttggccccctaagatttagcccca 12353364  T
Q  334 ttgc 337  Q
    ||||    
T  12353363 ttgc 12353360  T

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Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 22220391 - 22220490
Alignment:
Q  239 taaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||| |||||||| ||| ||||| ||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||| |||||    
T  22220391 taaagtgcacttttccccctctaactttaaaatacttgcaattttgaccccctatgtataaaaactacaattttggccccctaagatttagcccatttgc 22220490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 226 - 337
Target Start/End: Complemental strand, 32207434 - 32207324
Alignment:
Q  226 ataaaaacaaggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatt 325  Q
    ||||||| |||| ||||||||||||| | |||||||| || ||||||||| ||||||||| ||||||||||||||||||||||||| ||| | |||||||    
T  32207434 ataaaaaaaaggctaaagtgcactttcc-cccctaaccttcaaaaacttgcaattttgacgccctaagtacaaaaactacaattttggcctcttaagatt 32207336  T
Q  326 tagcccctttgc 337  Q
    ||||| ||||||    
T  32207335 tagcctctttgc 32207324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 249 - 337
Target Start/End: Original strand, 1823566 - 1823654
Alignment:
Q  249 ttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||| ||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||  | ||||||||||||||||| |||||    
T  1823566 ttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaatttcggtcccctaagatttagcccatttgc 1823654  T

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Target: chr8; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 249 - 337
Target Start/End: Original strand, 1858011 - 1858099
Alignment:
Q  249 ttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||| ||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||  | ||||||||||||||||| |||||    
T  1858011 ttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaatttcggtcccctaagatttagcccatttgc 1858099  T

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Target: chr8; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 10007861 - 10007762
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||||| |||||| ||||||||| ||||||| ||||||||||| | |||| |||||||| | |||||||||||||||||||||||    
T  10007861 taaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggtcccctaagatttagcccctttgc 10007762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 11287779 - 11287878
Alignment:
Q  239 taaagtgcactttt-cacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    |||||||||||||| ||||||||||||| ||||||||| ||||||| ||| ||||||||| ||||||||||||| ||||||||||| ||| | |||||||    
T  11287779 taaagtgcactttttcacccctaactttaaaaaacttgcaattttggcccactaagtacagaaactacaattttggccccctaagaattaactcctttgc 11287878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 241 - 330
Target Start/End: Complemental strand, 1824174 - 1824084
Alignment:
Q  241 aagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcc 330  Q
    ||||||| ||||| ||| |||||||| ||||||||| |||||||  |||||||||||||||||||||||||| ||||||||||||||||||    
T  1824174 aagtgcatttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccccctaagatttagcc 1824084  T

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Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 241 - 330
Target Start/End: Complemental strand, 1858619 - 1858529
Alignment:
Q  241 aagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcc 330  Q
    ||||||| ||||| ||| |||||||| ||||||||| |||||||  |||||||||||||||||||||||||| ||||||||||||||||||    
T  1858619 aagtgcatttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccccctaagatttagcc 1858529  T

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Target: chr8; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 234 - 330
Target Start/End: Original strand, 12351919 - 12352016
Alignment:
Q  234 aaggttaaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcc 330  Q
    |||| ||||||||| ||| | ||||| |||||| ||||| ||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  12351919 aaggctaaagtgcattttcccccccttaactttcaaaaatttgcaattttgaccccctaagtacaaaaactacaattttgaccccctaagatttagcc 12352016  T

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Target: chr8; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 245 - 337
Target Start/End: Original strand, 18970920 - 18971012
Alignment:
Q  245 gcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||| ||||||||||| |||| |||  ||||||| |||||||||||||||||||||||||||  ||||  |||||||| |||||||||    
T  18970920 gcacttttcccccctaactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttgacccctgaagatttaacccctttgc 18971012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 239 - 330
Target Start/End: Complemental strand, 30336599 - 30336507
Alignment:
Q  239 taaagtgcactt-ttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcc 330  Q
    |||||||||||| ||| ||||||||||| ||||||||  ||||||  || ||||||||||||||||||||||||| ||| |||||||||||||    
T  30336599 taaagtgcacttcttcccccctaactttcaaaaacttataattttagcctcctaagtacaaaaactacaattttaaccctctaagatttagcc 30336507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 337
Target Start/End: Original strand, 11282007 - 11282110
Alignment:
Q  235 aggttaaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccct 333  Q
    ||||||||||||||||||  ||||| |||||||||||| ||| ||||||| |||||||  ||||||||  ||||||||  |||||||||||||| |||||    
T  11282007 aggttaaagtgcactttttcccccttaacttttaaaaagttgcaattttggccccctatatacaaaaatgacaattttgaccccctaagatttaacccct 11282106  T
Q  334 ttgc 337  Q
    ||||    
T  11282107 ttgc 11282110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 18979218 - 18979119
Alignment:
Q  239 taaagtgcacttttcacccc-taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| |||| ||||||| || |||||| ||||||| |||||||| || ||||||||||||||| ||||| || |||||||||| |||||    
T  18979218 taaagtgcacttttccccccctaactttcaacaacttgcaattttggccccctaaatataaaaactacaattttggccccttatgatttagcccatttgc 18979119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 259 - 337
Target Start/End: Complemental strand, 24123975 - 24123897
Alignment:
Q  259 taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||| ||||||||| ||||||| || | ||||||| |||| ||||||||||||| |||||||||||||||||||||    
T  24123975 taactttcaaaaacttgcaattttggcctcttaagtactaaaattacaattttagcctcctaagatttagcccctttgc 24123897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 235 - 335
Target Start/End: Complemental strand, 8389791 - 8389690
Alignment:
Q  235 aggttaaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccct 333  Q
    ||||||||||||||||||| || || || ||| ||||| ||| |||||||  ||| || ||||||||||||||||||||| ||||||||||||| |||||    
T  8389791 aggttaaagtgcacttttcccctcttaagtttcaaaaagttgcaattttggtcccttatgtacaaaaactacaattttagtcccctaagatttaacccct 8389692  T
Q  334 tt 335  Q
    ||    
T  8389691 tt 8389690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 43661268 - 43661367
Alignment:
Q  239 taaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| |||| ||| ||| ||||| ||  |||||||  ||| || |||||||||||| |||||| |||||||||||||||||||||||||    
T  43661268 taaagtgcacttttctacccttaattttaaaaaagttacaattttggtcccttatgtacaaaaactataattttggccccctaagatttagcccctttgc 43661367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 278 - 336
Target Start/End: Original strand, 29043441 - 29043499
Alignment:
Q  278 attttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttg 336  Q
    |||||||||||||| |||||||||||||||||||  ||| |||||||||||||||||||    
T  29043441 attttgaccccctatgtacaaaaactacaattttttccctctaagatttagcccctttg 29043499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 30570358 - 30570255
Alignment:
Q  234 aaggttaaagtgcac-ttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    ||||||||||||||| ||||| || |||| ||||||||| ||| |||||||| ||  || ||||||||| || |||||| |||||||||||||||||||     
T  30570358 aaggttaaagtgcaccttttcccctctaagttttaaaaagttgcaattttgatcct-tatgtacaaaaattagaattttggccccctaagatttagccct 30570260  T
Q  333 tttgc 337  Q
    |||||    
T  30570259 tttgc 30570255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 229 - 336
Target Start/End: Complemental strand, 40471254 - 40471147
Alignment:
Q  229 aaaacaaggttaaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagattta 327  Q
    |||| |||||||||||||||||||| ||| | |||||| ||||||||  |||||||  ||  ||| |||||||||||||||||||||||| |||||||||    
T  40471254 aaaaaaaggttaaagtgcacttttccccctttaactttaaaaaacttacaattttggtcca-taaatacaaaaactacaattttagccccttaagattta 40471156  T
Q  328 gcccctttg 336  Q
     || |||||    
T  40471155 acctctttg 40471147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 43661919 - 43661828
Alignment:
Q  241 aagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagccc 331  Q
    ||||||||||||| |||| ||||||| ||||| ||| |||||| | || ||| |||||||||||| |||||| |||||||||||||| ||||    
T  43661919 aagtgcacttttccacccttaactttcaaaaagttgcaattttaatcctctatgtacaaaaactaaaattttggccccctaagatttcgccc 43661828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 255 - 337
Target Start/End: Complemental strand, 24488760 - 24488679
Alignment:
Q  255 cccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||| ||||||||| ||||||| |||||||| ||  ||||| |||||||| ||||| |||||||||||||| ||||    
T  24488760 cccctaactttcaaaaacttgcaattttggccccctaaatatcaaaacaacaatttt-gccccgtaagatttagccccattgc 24488679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 331
Target Start/End: Complemental strand, 5003184 - 5003103
Alignment:
Q  250 tttcacccctaacttttaaaaacttgaaattttgaccccctaagtac-aaaaactacaattttagccccctaagatttagccc 331  Q
    |||| ||||||||||| |||| |||| |||||| | ||||||||||| |||||| |||||||| | |||||||||||||||||    
T  5003184 tttcccccctaactttcaaaatcttgcaattttaaacccctaagtactaaaaaccacaatttt-gtcccctaagatttagccc 5003103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 5514367 - 5514270
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||  ||||||| ||| ||||||||| ||||||  ||  |||| |||||||||||||||||| | || |||| ||||||||| |||||    
T  5514367 taaagtgcacttttatcccctaattttaaaaaacttgcaattttagccttctaaatacaaaaactacaatttt-gacctctaaaatttagcccatttgc 5514270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 23170095 - 23170034
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaa 301  Q
    ||||||||| ||||| ||||||| ||| ||||||||| |||||||| ||||||||||||||||    
T  23170095 taaagtgca-ttttcccccctaattttcaaaaacttgcaattttgatcccctaagtacaaaaa 23170034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 30568890 - 30568988
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||| | || |||| ||| ||||| ||  |||||||| | | || |||||||||||| ||||||   |||||||||||||||||||||||    
T  30568890 taaagtgcactttccccctctaagtttcaaaaagttacaattttgatctcttaggtacaaaaactataattttgatcccctaagatttagcccctttgc 30568988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 337
Target Start/End: Original strand, 45112875 - 45112971
Alignment:
Q  240 aaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    |||||||| |||||  |||||||||| ||||| ||| |||||| |  | ||||||||||||| || |||||| | ||||||||| |||||||||||||    
T  45112875 aaagtgcatttttcctccctaactttcaaaaatttgtaatttt-agtctctaagtacaaaaattataattttggtcccctaagaattagcccctttgc 45112971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 11283307 - 11283208
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||| ||| | ||||| |||||| ||||| ||| ||||||  ||||||| ||| |||||  |||||||| | ||||||| |||||||||||||||    
T  11283307 taaagtgcattttcccccccttaactttcaaaaagttgtaattttagccccctatgtataaaaatgacaattttggtcccctaaaatttagcccctttgc 11283208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 337
Target Start/End: Complemental strand, 38980153 - 38980043
Alignment:
Q  228 aaaaacaaggttaaagtgcacttttcacccc-taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagattt 326  Q
    ||||| |||| ||||||||||||||| |||| ||||||| ||||  |||  |||||| ||||| | |||  ||||| |||||||| |||||||| | |||    
T  38980153 aaaaaaaaggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgtttt 38980054  T
Q  327 agcccctttgc 337  Q
    |||||| ||||    
T  38980053 agccccattgc 38980043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 337
Target Start/End: Complemental strand, 39011250 - 39011140
Alignment:
Q  228 aaaaacaaggttaaagtgcacttttcacccc-taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagattt 326  Q
    ||||| |||| ||||||||||||||| |||| ||||||| ||||  |||  |||||| ||||| | |||  ||||| |||||||| |||||||| | |||    
T  39011250 aaaaaaaaggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgtttt 39011151  T
Q  327 agcccctttgc 337  Q
    |||||| ||||    
T  39011150 agccccattgc 39011140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 43996049 - 43996003
Alignment:
Q  67 actcaagttgggatttcaatatgatttttgcagaaatataactagcg 113  Q
    ||||| |||| ||||||||| |||||||||||||| |||||||||||    
T  43996049 actcacgttgagatttcaatgtgatttttgcagaattataactagcg 43996003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 11288958 - 11288914
Alignment:
Q  239 taaagtgcactttt-cacccctaacttttaaaaacttgaaatttt 282  Q
    |||||||||||||| ||||||||||||| ||||||||| ||||||    
T  11288958 taaagtgcactttttcacccctaactttcaaaaacttgcaatttt 11288914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 24359866 - 24359902
Alignment:
Q  294 tacaaaaactacaattttagccccctaagatttagcc 330  Q
    ||||||||||||||||||  |||||||||||||||||    
T  24359866 tacaaaaactacaattttgaccccctaagatttagcc 24359902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 327
Target Start/End: Complemental strand, 34625241 - 34625209
Alignment:
Q  295 acaaaaactacaattttagccccctaagattta 327  Q
    |||||||||||||||||||||||||| ||||||    
T  34625241 acaaaaactacaattttagccccctatgattta 34625209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 6e-31; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 226 - 337
Target Start/End: Complemental strand, 38840604 - 38840492
Alignment:
Q  226 ataaaaacaaggttaaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagat 324  Q
    |||||||  ||| ||||||||||||||| ||||| |||||| ||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||    
T  38840604 ataaaaaataggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttagccccctaagat 38840505  T
Q  325 ttagcccctttgc 337  Q
    |||||||| ||||    
T  38840504 ttagccccattgc 38840492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 23869632 - 23869534
Alignment:
Q  239 taaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| |||| ||||||| ||||||||| ||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  23869632 taaagtgcacttttccacccttaacttt-aaaaacttgcaattttggccccctaaatacaaaaactacaattttagctccctaagatttagcccctttgc 23869534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 239 - 332
Target Start/End: Complemental strand, 7899980 - 7899886
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    ||||||||||||||| ||||| |||||| ||||||||| |||||||  |||||||||||| ||||||||||||||||||||||||||||||||||    
T  7899980 taaagtgcacttttccccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaattttagccccctaagatttagcccc 7899886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 234 - 337
Target Start/End: Original strand, 22848189 - 22848293
Alignment:
Q  234 aaggttaaagtgcactttt-cacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    |||| |||||||||||||| | ||||||||||| ||||||||| |||||||  ||||||| |||||||||||||||||| || |||||||||||||||||    
T  22848189 aaggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggctccctaagatttagcccc 22848288  T
Q  333 tttgc 337  Q
    |||||    
T  22848289 tttgc 22848293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 258 - 337
Target Start/End: Complemental strand, 11258889 - 11258810
Alignment:
Q  258 ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    |||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  11258889 ctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtcccctaagatttagccccattgc 11258810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 235 - 337
Target Start/End: Original strand, 7898690 - 7898793
Alignment:
Q  235 aggttaaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccct 333  Q
    ||||||||||||||||||| ||||| |||||| ||||||||| ||||||  || |||||||| | ||||||||||||| ||||||||||||||||||||     
T  7898690 aggttaaagtgcacttttctccccttaactttcaaaaacttgcaatttttgcctcctaagtatagaaactacaattttggccccctaagatttagcccca 7898789  T
Q  334 ttgc 337  Q
    ||||    
T  7898790 ttgc 7898793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 36449781 - 36449880
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||||| |||||| ||||||||| ||||||| |||||||||||||||||||||||||||  ||||| |||| |||| ||||||||    
T  36449781 taaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgcccccccaagaattaggccctttgc 36449880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 13030295 - 13030383
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagc 329  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||||| |||| |||||||||||| ||||||||| |||||||||||||||||    
T  13030295 taaagtgcacttttc-cccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttttgccccctaagatttagc 13030383  T

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Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 18300820 - 18300724
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    |||| |||||||||| ||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||| | ||||||  |||||||||||||||    
T  18300820 taaattgcacttttc-cccctaactttcataaacttgcaattttgaccccctaagtacaaaaactacaatttt-gacccctataatttagcccctttgc 18300724  T

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Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 235 - 337
Target Start/End: Complemental strand, 36451022 - 36450920
Alignment:
Q  235 aggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctt 334  Q
    ||||||||||||||||||| ||| ||||||| ||||||||| |||||||  |||||||||||| ||||||||||||  |||||| |||| ||||| ||||    
T  36451022 aggttaaagtgcacttttcccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaatttcggccccccaagaattagctcctt 36450923  T
Q  335 tgc 337  Q
    |||    
T  36450922 tgc 36450920  T

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Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 220
Target Start/End: Original strand, 38147135 - 38147213
Alignment:
Q  142 gtaaagagcagaattttaggcattatacatttattcctcctattattttagttgaattggtccgatagctagtcttgtg 220  Q
    |||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||||||    
T  38147135 gtaaagagcaaaactttaggcattatacatttattcctcttattattttagttgaattggtacgataactggtcttgtg 38147213  T

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Target: chr2; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 18797249 - 18797349
Alignment:
Q  239 taaagtgcacttttca--cccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttg 336  Q
    |||||||||||||||   ||||||||||| ||||||||| |||||||||||| ||||||  ||||||||||||||  |||||||| ||||||||||||||    
T  18797249 taaagtgcacttttccaccccctaactttcaaaaacttgcaattttgaccccttaagtattaaaactacaattttgaccccctaaaatttagcccctttg 18797348  T
Q  337 c 337  Q
    |    
T  18797349 c 18797349  T

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Target: chr2; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 8535757 - 8535655
Alignment:
Q  234 aaggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccct 333  Q
    ||||||||||| |||||||| | ||||||||||||||||||| |||||||| ||  |||||| | |||||||||||||  |||||||||| |||||||||    
T  8535757 aaggttaaagtacacttttc-ctcctaacttttaaaaacttgtaattttgatcctttaagtagagaaactacaattttgaccccctaagaattagcccct 8535659  T
Q  334 ttgc 337  Q
    ||||    
T  8535658 ttgc 8535655  T

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Target: chr2; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 18299376 - 18299475
Alignment:
Q  239 taaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| |||| ||||||| ||||||||  ||||||| || |||||||| ||||||||||||||| |||||||| |||||||||| |||||    
T  18299376 taaagtgcacttttccacccgtaactttcaaaaactttcaattttggccacctaagtataaaaactacaattttggccccctatgatttagcccttttgc 18299475  T

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Target: chr2; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 18906085 - 18905995
Alignment:
Q  239 taaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagc 329  Q
    ||||||||||||||| ||  |||||||| ||||||||| ||||||  ||||||||||||||||||||||||||||| |||||||||||||||    
T  18906085 taaagtgcacttttccccttctaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttag-cccctaagatttagc 18905995  T

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Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 239 - 335
Target Start/End: Original strand, 18904370 - 18904467
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagccccttt 335  Q
    ||||||||||||||| ||||| |||||| |||||| || ||||||| |||| |||||||||||||||||||||| |  |||||||| |||||||||||    
T  18904370 taaagtgcacttttccccccttaactttcaaaaacgtgcaattttggccccttaagtacaaaaactacaattttggttccctaagaattagccccttt 18904467  T

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Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 256 - 337
Target Start/End: Original strand, 28617943 - 28618023
Alignment:
Q  256 ccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    |||||||||| |||| |||| ||||||| ||||| ||||||||||||| ||||||| |||||||||||||||||||||||||    
T  28617943 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaacttcaatttt-gccccctaagatttagcccctttgc 28618023  T

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Target: chr2; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 22588056 - 22587953
Alignment:
Q  234 aaggttaaagtgcacttttcacccc-taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    |||| ||||||||| ||||| || | ||||||| ||||||||| ||||||| |||| || ||||||||||||||||||| ||||| ||||||||||||||    
T  22588056 aaggctaaagtgcatttttcccctcataactttcaaaaacttgcaattttggcccc-tatgtacaaaaactacaattttggccccttaagatttagcccc 22587958  T
Q  333 tttgc 337  Q
    |||||    
T  22587957 tttgc 22587953  T

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Target: chr2; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 337
Target Start/End: Original strand, 38839256 - 38839344
Alignment:
Q  249 ttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||| ||| ||| ||| ||||||||| ||||||  |||||||| |||||||||||||||||| |||||||||||||||||||| ||||    
T  38839256 ttttcccccttaattttcaaaaacttgcaattttagccccctaactacaaaaactacaattttggccccctaagatttagccccattgc 38839344  T

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Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 802693 - 802590
Alignment:
Q  234 aaggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccct 333  Q
    |||| ||||||| ||||||| ||||||| ||| ||||||||| ||||||| ||||||  |||||||||||||||||||  ||| |||||||||  |||||    
T  802693 aaggctaaagtgtacttttcccccctaagtttcaaaaacttgcaattttggccccctgtgtacaaaaactacaattttgaccctctaagattttacccct 802594  T
Q  334 ttgc 337  Q
    ||||    
T  802593 ttgc 802590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 41878095 - 41878196
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaact---tgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagccccttt 335  Q
    ||||||||||||| | ||| ||||||| |||||||   || ||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||||| ||    
T  41878095 taaagtgcactttccccccttaactttcaaaaactatttgcaattttggccccctaagtacagaaactacaattttggccccttaagatttagccccatt 41878194  T
Q  336 gc 337  Q
    ||    
T  41878195 gc 41878196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 337
Target Start/End: Original strand, 11257620 - 11257723
Alignment:
Q  234 aaggttaaagtgcactttt-cacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    |||| |||||||||||||| | || |||||||| ||||||||| |||||| | ||| |||||| ||||||||||||||| ||| ||||||||||||||||    
T  11257620 aaggctaaagtgcacttttactcctctaactttcaaaaacttgcaattttaaaccc-taagtataaaaactacaattttggcctcctaagatttagcccc 11257718  T
Q  333 tttgc 337  Q
     ||||    
T  11257719 attgc 11257723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 249 - 329
Target Start/End: Complemental strand, 41879299 - 41879219
Alignment:
Q  249 ttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagc 329  Q
    ||||| ||| ||| ||| ||||||||| ||||||| ||||||||||||| |||||||||||||| |||||||| |||||||    
T  41879299 ttttcccccttaattttcaaaaacttgcaattttggccccctaagtacataaactacaattttaaccccctaaaatttagc 41879219  T

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Target: chr2; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 234 - 329
Target Start/End: Original strand, 24475223 - 24475318
Alignment:
Q  234 aaggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagc 329  Q
    |||| |||||||| |||  | ||||||||||| ||||||||| ||||||  ||||||||||| ||||||||||||||| ||||||||  |||||||    
T  24475223 aaggctaaagtgcgcttccctcccctaactttcaaaaacttgtaatttttgccccctaagtataaaaactacaattttggccccctataatttagc 24475318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 26544152 - 26544250
Alignment:
Q  239 taaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| |||||||| ||||||||| ||  |||||||   || ||||||||||||||||| |||||||| ||||||||||||| |||||||    
T  26544152 taaagtgcacttttctacccctaatttttaaaaatttacaattttggttcc-taagtacaaaaactacagttttagcctcctaagatttagcacctttgc 26544250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 1033214 - 1033311
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||| ||||||| ||||||||||||||||||||| |||||||  ||||||| ||| |||| || ||||| | ||| ||||||||||||||| ||||    
T  1033214 taaagtgtacttttcccccctaacttttaaaaacttgcaattttg-gcccctaaataccaaaattataatttaacccctctaagatttagccccattgc 1033311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 239 - 311
Target Start/End: Original strand, 18868927 - 18869000
Alignment:
Q  239 taaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaatttt 311  Q
    ||||||| ||||||| |||||||||||| ||||||||| ||||||| || ||||| ||||||||||||||||||    
T  18868927 taaagtgtacttttccacccctaactttcaaaaacttgcaattttggcctcctaaatacaaaaactacaatttt 18869000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 311
Target Start/End: Complemental strand, 24476937 - 24476869
Alignment:
Q  242 agtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaatttt 311  Q
    |||||||||||  |||| |||||||||||||||| |||||||  ||||||||||||||||||||||||||    
T  24476937 agtgcactttttccccc-aacttttaaaaacttgtaattttggtcccctaagtacaaaaactacaatttt 24476869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 330
Target Start/End: Complemental strand, 1034567 - 1034475
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcc 330  Q
    ||||||||||||||| ||||| |||||| |||||| || ||||||| ||||||| |||| ||||| |||||||   |||||||||||||||||    
T  1034567 taaagtgcacttttccccccttaactttcaaaaacatgcaattttggccccctacgtaccaaaaccacaatttagcccccctaagatttagcc 1034475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 11938886 - 11938796
Alignment:
Q  239 taaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagc 329  Q
    ||||||||||||||| |||||||||||| ||||||||| |||||||  | |||||||||||||| || ||||||  |||||||||| |||||    
T  11938886 taaagtgcacttttccacccctaactttcaaaaacttgcaattttggtctcctaagtacaaaaa-tataattttgcccccctaagaattagc 11938796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 318
Target Start/End: Original strand, 32739643 - 32739706
Alignment:
Q  255 cccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccc 318  Q
    ||||||||||| ||||||||| ||||||| |||| || ||||||||||||||||||| ||||||    
T  32739643 cccctaactttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttggccccc 32739706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 234 - 311
Target Start/End: Original strand, 13567970 - 13568048
Alignment:
Q  234 aaggttaaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaatttt 311  Q
    |||||||||||| ||||||| ||  |||| ||| ||||||||| ||||||| |||||||| ||||||||||||||||||    
T  13567970 aaggttaaagtgtacttttccccttctaagtttcaaaaacttgcaattttggccccctaaatacaaaaactacaatttt 13568048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 335
Target Start/End: Original strand, 11996750 - 11996807
Alignment:
Q  278 attttgaccccctaagtacaaaaactacaattttagccccctaagatttagccccttt 335  Q
    |||||||||||||| |||||||||||||||||||||  | |||||||||| |||||||    
T  11996750 attttgaccccctatgtacaaaaactacaattttagttctctaagatttaaccccttt 11996807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 337
Target Start/End: Original strand, 22587522 - 22587602
Alignment:
Q  256 ccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    |||||||||| ||||| ||  |||||||  ||||||  |||||||||||||||||| |||||||||||||||||| ||||||    
T  22587522 ccctaactttcaaaaagttccaattttggtcccctat-tacaaaaactacaattttggccccctaagatttagcctctttgc 22587602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 261 - 337
Target Start/End: Complemental strand, 26545596 - 26545520
Alignment:
Q  261 acttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||| ||||| ||| |||||||||||| ||| |||||||| || ||||||  ||| ||||||||||||||||||||    
T  26545596 actttcaaaaatttgcaattttgaccccttaaatacaaaaattataattttgaccctctaagatttagcccctttgc 26545520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 331
Target Start/End: Complemental strand, 18869251 - 18869168
Alignment:
Q  249 ttttcacccctaacttttaaaaacttga-aattttgaccccctaagtacaaaaactacaattttagccccctaagatttagccc 331  Q
    |||||||| |||||||| ||||| |||  ||||||| ||  |||||||||||||||||||||||   |||||||||||||||||    
T  18869251 ttttcacctctaactttcaaaaatttggcaattttggccttctaagtacaaaaactacaatttttatcccctaagatttagccc 18869168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 337
Target Start/End: Complemental strand, 810850 - 810780
Alignment:
Q  267 aaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||| ||||||| ||||||  |||||||||||||||||||  ||| |||||||||  |||||||||    
T  810850 aaaaacttgcaattttggccccctgtgtacaaaaactacaattttgaccctctaagattttacccctttgc 810780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 337
Target Start/End: Complemental strand, 1093223 - 1093145
Alignment:
Q  259 taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||  ||| |||| |||  |||||  |||||||| |||||||||| ||| ||||||||||||||||||||    
T  1093223 taacttttaaaatgttgcaattgtgattccctatatacaaaaattacaattttaacccgctaagatttagcccctttgc 1093145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 335
Target Start/End: Complemental strand, 13570660 - 13570558
Alignment:
Q  234 aaggttaaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    |||| ||||||||| ||||| |||| ||||||| ||||||||| ||||||   ||| ||||||||||||||| |||||| | |||| |||| |||| |||    
T  13570660 aaggctaaagtgcatttttctacccataactttcaaaaacttgcaattttagtcccttaagtacaaaaactataattttggtcccccaagaattagtccc 13570561  T
Q  333 ttt 335  Q
    |||    
T  13570560 ttt 13570558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 311
Target Start/End: Original strand, 16446157 - 16446230
Alignment:
Q  239 taaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaatttt 311  Q
    ||||||||| ||||| |||| ||||||| ||||||||| |||||| ||| | ||| ||||||||||||||||||    
T  16446157 taaagtgcatttttctacccttaactttcaaaaacttgcaattttaacctcataaatacaaaaactacaatttt 16446230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 293
Target Start/End: Complemental strand, 21837357 - 21837298
Alignment:
Q  233 caaggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaag 293  Q
    ||||| ||||||||||||||  ||||||||||| ||||||||| ||||||| |||||||||    
T  21837357 caaggctaaagtgcacttttt-cccctaactttcaaaaacttgcaattttggccccctaag 21837298  T

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Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 236 - 291
Target Start/End: Original strand, 13830267 - 13830322
Alignment:
Q  236 ggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgacccccta 291  Q
    |||||||||||||||||| ||||||| ||| ||||| |||  ||||||||||||||    
T  13830267 ggttaaagtgcacttttcccccctaagtttgaaaaagttgcgattttgacccccta 13830322  T

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Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 337
Target Start/End: Original strand, 12812910 - 12812938
Alignment:
Q  309 tttagccccctaagatttagcccctttgc 337  Q
    |||||||||||||||||||||||||||||    
T  12812910 tttagccccctaagatttagcccctttgc 12812938  T

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Target: scaffold0302 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 17473 - 17572
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||  ||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||| |||| ||| |||||||||    
T  17473 taaagtgcactttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccccaagaattatcccctttgc 17572  T

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Target: scaffold0302; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 18874 - 18775
Alignment:
Q  239 taaagtgcacttttcacc-cctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||  || ||||||||||||||| ||| |||||||  |||||| |||||||||||| |||||| ||||| ||| |||||||||| ||||    
T  18874 taaagtgcactttttccctcctaacttttaaaaatttgcaattttggtcccctaggtacaaaaactataattttggccccttaaaatttagccccattgc 18775  T

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Target: scaffold0019 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 60093 - 60192
Alignment:
Q  239 taaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    |||||||||||||||  || |||||||||||||||||| ||||||||||||||| ||| |||||||||||||||  ||||||| ||||||||||||||||    
T  60093 taaagtgcacttttcctcctctaacttttaaaaacttgcaattttgaccccctatgtataaaaactacaattttgaccccctatgatttagcccctttgc 60192  T

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Target: scaffold0019; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 61557 - 61458
Alignment:
Q  239 taaagtgcacttttcacccctaactttt-aaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    |||||||||||||||  |||| | |||| ||||||||| ||||||  |||||||||||||||||||| |||||| |||||||| |||||||||| |||||    
T  61557 taaagtgcacttttcctcccttaattttcaaaaacttgcaattttagccccctaagtacaaaaactataattttggccccctatgatttagcccttttgc 61458  T

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Target: scaffold0632 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 3405 - 3307
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||||| ||||| ||||||||  |||||||||||| || |||||||||||| |||||| | |||||||||||||||||||||||    
T  3405 taaagtgcacttttccccccttactttcaaaaacttacaattttgaccccataggtacaaaaactataattttggtcccctaagatttagcccctttgc 3307  T

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Target: scaffold0294 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 332
Target Start/End: Complemental strand, 5536 - 5442
Alignment:
Q  239 taaagtgcacttttcacccc-taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    ||||||||||||||| |||| ||| ||| ||||||||| |||||||||||| ||||||||||||||||||||||  |||| ||||||||||||||    
T  5536 taaagtgcacttttccccccctaattttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttgcccccttaagatttagcccc 5442  T

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Target: scaffold0294; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 332
Target Start/End: Original strand, 4427 - 4539
Alignment:
Q  221 ctattataaaaacaaggttaaagtgcac-ttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccct 319  Q
    |||| |||| ||| ||| |||||||||| ||||| ||||||| ||| ||||||||  ||||||  |||| |||||||||||| |||||||||| ||||||    
T  4427 ctataataataactaggctaaagtgcacattttcccccctaattttcaaaaacttacaattttagccccttaagtacaaaaattacaattttacccccct 4526  T
Q  320 aagatttagcccc 332  Q
    || ||||||||||    
T  4527 aaaatttagcccc 4539  T

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Target: scaffold0112 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 332
Target Start/End: Original strand, 37151 - 37244
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaactt-gaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    ||||||||||||||| |||||| |||||||||| || | |||||||||||||||||||||||||| |||||||| |||||||| |||||||||||    
T  37151 taaagtgcacttttc-cccctatcttttaaaaaatttgcaattttgaccccctaagtacaaaaacaacaattttggccccctacgatttagcccc 37244  T

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Target: scaffold1303 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 1442 - 1541
Alignment:
Q  239 taaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||| ||||||| ||| |||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||||  |||||||||||||||||| |||||    
T  1442 taaagtgtacttttccccctctaactttaaaaaacttgcaattttgaccccctatgtataaaaactataattttgaccccctaagatttagcccatttgc 1541  T

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Target: scaffold0093 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 2562 - 2472
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaa-cttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagc 329  Q
    ||||||||||||||| ||||||||||| ||||| |||| |||||||||||||||||||||||||| || ||||| |||||||| ||||||||    
T  2562 taaagtgcacttttc-cccctaactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggccccctacgatttagc 2472  T

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Target: scaffold0093; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 7185 - 7095
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaa-cttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagc 329  Q
    ||||||||||||||| ||||||||||| ||||| |||| |||||||||||||||||||||||||| || ||||| |||||||| ||||||||    
T  7185 taaagtgcacttttc-cccctaactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggccccctacgatttagc 7095  T

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Target: scaffold0369 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 234 - 327
Target Start/End: Original strand, 13191 - 13283
Alignment:
Q  234 aaggttaaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagattta 327  Q
    |||| ||||||||||||||| ||||||||||| ||||| |||  ||||||||| |||| |||| |||||||||||||| | |||||||||||||    
T  13191 aaggctaaagtgcacttttc-cccctaactttgaaaaagttgtgattttgacctcctatgtacgaaaactacaatttttgtcccctaagattta 13283  T

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Target: scaffold0049 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 7518 - 7414
Alignment:
Q  234 aaggttaaagtgcacttttcaccc-ctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccc 332  Q
    |||| |||||||||||| || ||| |||| ||| ||||| ||   |||||||||||||| ||||| |||||||||||||  |||||||||||||||||||    
T  7518 aaggctaaagtgcacttgtccccctctaagtttgaaaaagttacgattttgaccccctatgtacagaaactacaattttgaccccctaagatttagcccc 7419  T
Q  333 tttgc 337  Q
    |||||    
T  7418 tttgc 7414  T

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Target: scaffold0049; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 335
Target Start/End: Original strand, 7541 - 7637
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagccccttt 335  Q
    ||||||||||||| | ||  ||| ||| ||||| ||| || |||||||||||| | |||||||||||||||||||| ||||| ||||||||| ||||    
T  7541 taaagtgcactttccccctataagtttgaaaaagttgtaaatttgaccccctatgaacaaaaactacaattttagctccctacgatttagcctcttt 7637  T

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Target: scaffold2034 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 236 - 335
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||| | ||||| |||||| ||||| ||| |||||||  |||||| |||||||||||| |||||| | ||||||||| |||||||||||||    
T  236 taaagtgcactttcccccccttaactttcaaaaagttgcaattttggtcccctatgtacaaaaactataattttggtcccctaagaattagcccctttgc 335  T

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Target: scaffold2034; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 337
Target Start/End: Complemental strand, 1055 - 977
Alignment:
Q  259 taacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||| ||| |||||||  ||| || |||||||||||| |||||| |||||| |||| |||||||||||||    
T  1055 taacttttaaaaagttgcaattttggtcccttatgtacaaaaactataattttggccccccaagaattagcccctttgc 977  T

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Target: scaffold0320 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 19491 - 19590
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaac-ttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||| ||||| ||||| | |||| ||||| ||| ||||||| ||||||||||| |||||||||||||||   ||||||||||||| |||||||||    
T  19491 taaagtgcatttttccccccttaattttcaaaaccttgcaattttggccccctaagtataaaaactacaattttgatcccctaagatttaacccctttgc 19590  T

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Target: scaffold0059 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 3695 - 3770
Alignment:
Q  255 cccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcc 330  Q
    ||||||||||| ||||||||| ||||||| |||||| |||| | |||||| |||||||| ||||||||||||||||    
T  3695 cccctaactttcaaaaacttgcaattttggccccctgagtaaagaaactataattttagtcccctaagatttagcc 3770  T

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Target: scaffold0059; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 4827 - 4729
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||| |  ||||||||||||||||| || ||||||| |||||||| |||| |||||||||||||  ||| ||||  ||||||||| ||||    
T  4827 taaagtgcactttccctccctaacttttaaaaacatgcaattttggccccctaaatacagaaactacaattttgaccctctaaattttagccccattgc 4729  T

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Target: scaffold0003 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 49531 - 49432
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||||| |||||| ||||| ||| ||||||| |||||||   | |||||||||||||||  |||||||||||||||| |||||||    
T  49531 taaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgaccccctaagatttagctcctttgc 49432  T

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Target: scaffold0186 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 337
Target Start/End: Original strand, 23084 - 23181
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcccctttgc 337  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||||| ||| |||||||| ||||| ||||| ||   |||||||| ||||||||| ||||    
T  23084 taaagtgcacttttc-cccctaactttcaaaaacttgcaattttgtccctctaagtaccaaaacaacaatcttgctcccctaagctttagccccattgc 23181  T

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Target: scaffold0045 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 311
Target Start/End: Complemental strand, 49182 - 49109
Alignment:
Q  239 taaagtgcacttttc-acccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaatttt 311  Q
    |||| |||||||||| |||| ||||||||||||||||| ||||||| || ||||||||  ||||||||||||||    
T  49182 taaattgcacttttccacccttaacttttaaaaacttgcaattttggcctcctaagtattaaaactacaatttt 49109  T

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Target: scaffold0586 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 6342 - 6438
Alignment:
Q  235 aggttaaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagcc 330  Q
    |||||||||||||||||||  |||| || ||| ||||| ||   |||||  ||||||| |||||||||||||||||||  |||||||||||||||||    
T  6342 aggttaaagtgcacttttccgcccttaagtttcaaaaagttacgattttagccccctatgtacaaaaactacaattttgaccccctaagatttagcc 6438  T

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Target: scaffold0586; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 331
Target Start/End: Complemental strand, 9123 - 9032
Alignment:
Q  239 taaagtgcacttttcacccctaacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagccc 331  Q
    ||||||||||||||  | ||| | ||| ||||| |||  |||||  || |||| ||||||||||||||||||| | |||||||||||||||||    
T  9123 taaagtgcactttttcctccttaatttcaaaaagttgtgatttttgcctcctatgtacaaaaactacaatttt-ggcccctaagatttagccc 9032  T

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Target: scaffold0321 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 335
Target Start/End: Original strand, 18731 - 18828
Alignment:
Q  239 taaagtgcacttttcacccct-aacttttaaaaacttgaaattttgaccccctaagtacaaaaactacaattttagccccctaagatttagccccttt 335  Q
    ||||||||||||||  || || |||||||||||| |||  ||||||||| |||| | |||||||||||||||||  || ||||||| ||| |||||||    
T  18731 taaagtgcactttttccctcttaacttttaaaaagttgcgattttgacctcctatgaacaaaaactacaattttgacctcctaagaattaaccccttt 18828  T

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