View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11870_low_44 (Length: 250)

Name: NF11870_low_44
Description: NF11870
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11870_low_44
NF11870_low_44
[»] chr8 (2 HSPs)
chr8 (3-232)||(9692510-9692740)
chr8 (4-232)||(9675488-9675717)
[»] chr4 (3 HSPs)
chr4 (1-232)||(35155519-35155751)
chr4 (1-232)||(35162539-35162771)
chr4 (106-229)||(15556218-15556342)
[»] chr3 (15 HSPs)
chr3 (86-232)||(47397100-47397247)
chr3 (72-194)||(5160446-5160569)
chr3 (69-220)||(16025653-16025805)
chr3 (8-183)||(46236636-46236814)
chr3 (72-192)||(45883565-45883686)
chr3 (72-195)||(46526254-46526378)
chr3 (72-195)||(5156417-5156541)
chr3 (66-221)||(46539163-46539319)
chr3 (8-194)||(46484156-46484343)
chr3 (109-195)||(46544681-46544768)
chr3 (88-183)||(46554026-46554121)
chr3 (1-166)||(47414052-47414217)
chr3 (86-194)||(51944076-51944185)
chr3 (90-162)||(45903145-45903217)
chr3 (8-56)||(47397277-47397325)
[»] chr2 (3 HSPs)
chr2 (61-232)||(20144790-20144962)
chr2 (61-190)||(20359300-20359430)
chr2 (61-232)||(20168812-20168984)


Alignment Details
Target: chr8 (Bit Score: 207; Significance: 1e-113; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 3 - 232
Target Start/End: Complemental strand, 9692740 - 9692510
Alignment:
Q  3 agctatggttgagaaagtggcttctgaatttgagttactagagcacaagcttccttataaactagtgagagtaggtgaattccaaattccaagattcaaa 102  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9692740 agctatggttgagaaagtggcttctgaatttgagttcctagagcacaagcttccttataaactagtgagaataggtgaattccaaattccaagattcaaa 9692641  T
Q  103 ttttcatttgggcttgaaacttctcgtatgatgaaggagttaggagtgagtttacctttctcttctggaggtttaac-aaaatggtggactctcttgaag 201  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  9692640 ttttcatttgggcttgaaacttctcgtatgacgaaggagttaggagtgagtttacctttctcttctggaggtttgacaaaaatggtggactctcttgaag 9692541  T
Q  202 gtcaagacctttctgtttccaacatatttca 232  Q
    |||||||||||||||||||||||||||||||    
T  9692540 gtcaagacctttctgtttccaacatatttca 9692510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 4 - 232
Target Start/End: Complemental strand, 9675717 - 9675488
Alignment:
Q  4 gctatggttgagaaagtggcttctgaatttgagttactagagcacaagcttccttataaactagtgagagtaggtgaattccaaattccaagattcaaat 103  Q
    ||||||||||| || |||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||| | ||||||||||||||||||||||    
T  9675717 gctatggttgaaaaggtggcttctgaatttgagttcctagagcccaagcttccttataaacgagtgaaagtaggtaatttccaaattccaagattcaaat 9675618  T
Q  104 tttcatttgggcttgaaacttctcgtatgatgaaggagttaggagtgagtttacctttctcttctggaggtttaac-aaaatggtggactctcttgaagg 202  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||    
T  9675617 tttcatttgggcttgaaacttctcgaatgatgaaggagctaggagtgattttacctttctcttctggaggtttgacaaaaatggtggactctcttgaagg 9675518  T
Q  203 tcaagacctttctgtttccaacatatttca 232  Q
    ||||||| ||||||||||||||||||||||    
T  9675517 tcaagacttttctgtttccaacatatttca 9675488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 2e-57; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 35155519 - 35155751
Alignment:
Q  1 tcagctatggttgagaaagtggcttctgaatttgagttactagagcacaagcttccttataaactagtgagagtaggtgaattccaaattccaagattca 100  Q
    |||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||  || | |||||||||  ||| |||||||||||||||    
T  35155519 tcagctttggttgagaaggtggcttctgaatttgagttgctagagcacaagcttccttataaaacagcgcgagtaggtggcttcaaaattccaagattca 35155618  T
Q  101 aattttcatttgggcttgaaacttctcgtatgatgaaggagttaggagtgagtttacctttctcttctggaggtttaac-aaaatggtggactctcttga 199  Q
    ||||||||| |  ||||||| |||||| |||| |||| ||  ||||||||| |||||||||||||||||| ||||| || ||||||||||||||||||||    
T  35155619 aattttcatctaagcttgaatcttctcatatgctgaaagacctaggagtgattttacctttctcttctgggggtttgacaaaaatggtggactctcttga 35155718  T
Q  200 aggtcaagacctttctgtttccaacatatttca 232  Q
    ||||||| | || || |||  ||||||||||||    
T  35155719 aggtcaaaatctctccgttagcaacatatttca 35155751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 35162539 - 35162771
Alignment:
Q  1 tcagctatggttgagaaagtggcttctgaatttgagttactagagcacaagcttccttataaactagtgagagtaggtgaattccaaattccaagattca 100  Q
    |||||| |||||||||| ||||||||||| |||||| | |||||| ||| |||||||| |||   ||||  ||||||||  ||| ||||||||| |||||    
T  35162539 tcagctttggttgagaaggtggcttctgattttgagctcctagagaacatgcttccttgtaatagagtgccagtaggtggcttcaaaattccaaaattca 35162638  T
Q  101 aattttcatttgggcttgaaacttctcgtatgatgaaggagttaggagtgagtttacctttctcttctggaggtttaac-aaaatggtggactctcttga 199  Q
    ||||||||| ||||||||||||||||||| || |||||||  ||||||||| |||||||||||||||||||||||| || |||||||||||||| |||||    
T  35162639 aattttcatatgggcttgaaacttctcgtgtgctgaaggatctaggagtgattttacctttctcttctggaggtttgacaaaaatggtggactcacttga 35162738  T
Q  200 aggtcaagacctttctgtttccaacatatttca 232  Q
    ||||||| ||||||  |||||||||||||||||    
T  35162739 aggtcaaaaccttttagtttccaacatatttca 35162771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 106 - 229
Target Start/End: Original strand, 15556218 - 15556342
Alignment:
Q  106 tcatttgggcttgaaacttctcgtatgatgaaggagttaggagtgagtttacctttctcttctggaggtttaac-aaaatggtggactctcttgaaggtc 204  Q
    ||||||||| |||||||||||  |||| |||||||  ||||||||  ||||||||||||| | |||||||| || |||||||||||||| ||||  ||||    
T  15556218 tcatttgggtttgaaacttctgatatgctgaaggacctaggagtggttttacctttctctcccggaggtttgactaaaatggtggactcacttgcgggtc 15556317  T
Q  205 aagacctttctgtttccaacatatt 229  Q
    ||||||| | |||||| ||||||||    
T  15556318 aagacctgtttgtttctaacatatt 15556342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 7e-33; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 86 - 232
Target Start/End: Complemental strand, 47397247 - 47397100
Alignment:
Q  86 aaattccaagattcaaattttcatttgggcttgaaacttctcgtatgatgaaggagttaggagtgagtttacctttctcttctggaggtttaac-aaaat 184  Q
    ||||||||||||||||||||||| || ||||||||||||||  |||| |||||||||||||||||| ||||||||||||    ||||||||||| |||||    
T  47397247 aaattccaagattcaaattttcaatttggcttgaaacttctgatatgttgaaggagttaggagtgattttacctttctccctcggaggtttaacaaaaat 47397148  T
Q  185 ggtggactctcttgaaggtcaagacctttctgtttccaacatatttca 232  Q
    | |||||| ||| |  |||||| |||||| ||||||||||||||||||    
T  47397147 gatggactttctagcgggtcaaaacctttttgtttccaacatatttca 47397100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 72 - 194
Target Start/End: Original strand, 5160446 - 5160569
Alignment:
Q  72 agtaggtgaattccaaattccaagattcaaattttcatttgggcttgaaacttctcgtatgatgaaggagttaggagtgagtttacctttctcttctgga 171  Q
    |||||||||||||  |||||||||||||||| ||||||||| |||||||||||||  |||| |||||||||||||||||| |||||||||| ||  || |    
T  5160446 agtaggtgaattcagaattccaagattcaaaatttcatttgagcttgaaacttctgatatgctgaaggagttaggagtgactttacctttcactcgtgaa 5160545  T
Q  172 ggtttaac-aaaatggtggactct 194  Q
    ||||| || |||||||||||||||    
T  5160546 ggtttgacaaaaatggtggactct 5160569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 69 - 220
Target Start/End: Original strand, 16025653 - 16025805
Alignment:
Q  69 gagagtaggtgaattccaaattccaagattcaaattttcatttgggcttgaaacttctcgtatgatgaaggagttaggagtgagtttacctttctcttct 168  Q
    |||||||||||| |||  ||||||||| |||||  ||||||||||| |||||||||||  |||| |||||||| | |||||   ||||||||||||| ||    
T  16025653 gagagtaggtgatttcagaattccaaggttcaaggtttcatttgggtttgaaacttctgatatgctgaaggagcttggagtagttttacctttctctcct 16025752  T
Q  169 ggaggtttaac-aaaatggtggactctcttgaaggtcaagacctttctgtttc 220  Q
    |||||||| || ||||||||||||| |||||||  ||||||||| | ||||||    
T  16025753 ggaggtttgacaaaaatggtggactttcttgaacatcaagacctctttgtttc 16025805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 8 - 183
Target Start/End: Complemental strand, 46236814 - 46236636
Alignment:
Q  8 tggttgagaaagtggcttctgaatttgagttactagagcacaagcttcctta---taaactagtgagagtaggtgaattccaaattccaagattcaaatt 104  Q
    ||||||||||  ||||||||||||||||||||| ||| ||||| ||||||     ||||  ||||   |||||||| ||| | ||||||||||||||  |    
T  46236814 tggttgagaagctggcttctgaatttgagttaccagaacacaatcttcctctcattaaaaaagtggcggtaggtgagttcaagattccaagattcaatat 46236715  T
Q  105 ttcatttgggcttgaaacttctcgtatgatgaaggagttaggagtgagtttacctttctcttctggaggtttaacaaaa 183  Q
    ||| |||||  |||||||| ||  || |||||||||||||||||||| ||||||||||||| |||||||||| ||||||    
T  46236714 ttcgtttggaattgaaactactaatacgatgaaggagttaggagtgattttacctttctctgctggaggttttacaaaa 46236636  T

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Target: chr3; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 192
Target Start/End: Complemental strand, 45883686 - 45883565
Alignment:
Q  72 agtaggtgaattccaaattccaagattcaaattttcatttgggcttgaaacttctcgtatgatgaaggagttaggagtgagtttacctttctcttctgga 171  Q
    ||||||||| |||  |||||||||||||||  |||||||||||||||||||||||  |||| |||||||||||||||||  || ||||||||||  ||||    
T  45883686 agtaggtgacttcagaattccaagattcaatgtttcatttgggcttgaaacttctaatatgttgaaggagttaggagtggtttcacctttctctcgtgga 45883587  T
Q  172 ggtttaac-aaaatggtggact 192  Q
     |||| || |||||||||||||    
T  45883586 agtttgacaaaaatggtggact 45883565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 195
Target Start/End: Complemental strand, 46526378 - 46526254
Alignment:
Q  72 agtaggtgaattccaaattccaagattcaaattttcatttgggcttgaaacttctcgtatgatgaaggagttaggagtgagtttacctttctcttctgga 171  Q
    ||||||||| |||  |||||||| ||||||||||||||||| |||||| |||||||  ||| |||| ||||||| ||||| |||||||||||||| |||     
T  46526378 agtaggtgatttcagaattccaaaattcaaattttcatttgagcttgacacttctcaaatgttgaaagagttagaagtgattttacctttctcttgtggg 46526279  T
Q  172 ggtttaacaaa-atggtggactctc 195  Q
    ||||| ||||| || ||||||||||    
T  46526278 ggtttgacaaatattgtggactctc 46526254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 195
Target Start/End: Original strand, 5156417 - 5156541
Alignment:
Q  72 agtaggtgaattccaaattccaagattcaaattttcatttgggcttgaaacttctcgtatgatgaaggagttaggagtgagtttacctttctcttctgga 171  Q
    ||||| |||||||  |||||||||||||||| ||||||||| ||||||||||||   |||| | || ||| ||||||||| |||||||||| ||  ||||    
T  5156417 agtagttgaattcagaattccaagattcaaaatttcatttgagcttgaaacttccgatatgttcaaagagctaggagtgattttacctttcactcgtgga 5156516  T
Q  172 ggtttaac-aaaatggtggactctc 195  Q
    ||||| || ||||||||||||||||    
T  5156517 ggtttgacaaaaatggtggactctc 5156541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 221
Target Start/End: Original strand, 46539163 - 46539319
Alignment:
Q  66 agtgagagtaggtgaattccaaattccaagattcaaattttcatttgggcttgaaacttctcgtatgatgaaggagttaggagtgagtttacctttctct 165  Q
    |||| |||||||||| |||  |||||||||||||||| |||| |||| |||||||||||||  |||| | |||||| ||||| ||  |||||||||||||    
T  46539163 agtgcgagtaggtgacttcagaattccaagattcaaaatttcttttgagcttgaaacttctaatatgcttaaggagctaggaatggttttacctttctct 46539262  T
Q  166 tctggaggtttaac-aaaatggtggactctcttgaaggtcaagacctttctgtttcc 221  Q
       |||||||| || |||||||||||||||| |  | ||||| |||||| |||||||    
T  46539263 caaggaggtttgacaaaaatggtggactctcctacaagtcaaaacctttatgtttcc 46539319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 194
Target Start/End: Original strand, 46484156 - 46484343
Alignment:
Q  8 tggttgagaaagtggcttctgaatttgagttactagagcacaagcttccttataaactagtgagagtaggtgaattccaaattccaagattcaaattttc 107  Q
    ||||||| || ||||||||||||||||| |||||| | ||||||||||||| | |   ||||  ||||||||| ||    |||||||  |||||  ||||    
T  46484156 tggttgaaaaggtggcttctgaatttgatttactacaacacaagcttccttttgataaagtggaagtaggtgactttaggattccaaagttcaatatttc 46484255  T
Q  108 atttgggcttgaaacttctcgtatgatgaaggagttaggagtgagtttacctttctcttctggaggtttaacaaa-atggtggactct 194  Q
    |||||| ||||||||||||  |||| | |||||| |||| |||  |||||||||||||  ||||||| | ||||| |||||| |||||    
T  46484256 atttggacttgaaacttctgttatgctaaaggagctaggtgtggttttacctttctctggtggaggtctgacaaagatggtgaactct 46484343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 195
Target Start/End: Original strand, 46544681 - 46544768
Alignment:
Q  109 tttgggcttgaaacttctcgtatgatgaaggagttaggagtgagtttacctttctcttctggaggtttaacaaa-atggtggactctc 195  Q
    |||||||||||||||||| |  || |||||||| ||||||||  ||||||||||||| | |||||||| ||||| |||||||||||||    
T  46544681 tttgggcttgaaacttctggcgtgctgaaggagctaggagtggttttacctttctctacaggaggtttgacaaatatggtggactctc 46544768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 88 - 183
Target Start/End: Complemental strand, 46554121 - 46554026
Alignment:
Q  88 attccaagattcaaattttcatttgggcttgaaacttctcgtatgatgaaggagttaggagtgagtttacctttctcttctggaggtttaacaaaa 183  Q
    |||||||| ||| || |||| |||||| |||||  ||||  |||| |||||||||| ||||||| |||||||||||||  ||||||||||||||||    
T  46554121 attccaagtttcgaaatttcttttgggtttgaactttctaatatgctgaaggagttgggagtgattttacctttctctaatggaggtttaacaaaa 46554026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 47414217 - 47414052
Alignment:
Q  1 tcagctatggttgagaaagtggcttctgaatttgagttactagagcacaagcttccttataaactagtgagagtaggtgaattccaaattccaagattca 100  Q
    |||||| |||||||||| ||||||||||||| |||||||||| | |||||||||| |  |     ||| | ||||||||| |||  ||||||||||||||    
T  47414217 tcagctttggttgagaaggtggcttctgaatctgagttactacaccacaagcttcatctttctaaagtcaaagtaggtgacttcagaattccaagattca 47414118  T
Q  101 aattttcatttgggcttgaaacttctcgtatgatgaaggagttaggagtgagtttacctttctctt 166  Q
    |  |||||||||  |  |||| ||||  |||  ||||||||||||||||| |||||  ||||||||    
T  47414117 aggtttcatttgaacaagaaatttctgatatcctgaaggagttaggagtgggtttagatttctctt 47414052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 51944076 - 51944185
Alignment:
Q  86 aaattccaagattcaaattttcatttgggcttgaaacttctcgtatgatgaaggagttaggagtgagtttacctttctcttctggaggtttaac-aaaat 184  Q
    ||||||| | ||||||  ||||||||| ||||||| || |||||||| | ||| || ||||||||  ||||||||||||  |||||||||| || |||||    
T  51944076 aaattccgaaattcaatatttcatttgagcttgaagctactcgtatgctaaagaagctaggagtggttttacctttctcacctggaggttttacaaaaat 51944175  T
Q  185 ggtggactct 194  Q
    ||||||||||    
T  51944176 ggtggactct 51944185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 45903145 - 45903217
Alignment:
Q  90 tccaagattcaaattttcatttgggcttgaaacttctcgtatgatgaaggagttaggagtgagtttacctttc 162  Q
    ||||| ||||||||||||||||||| |||||  |||||||||| || | ||| ||| ||| ||||||||||||    
T  45903145 tccaaaattcaaattttcatttgggtttgaagtttctcgtatgttgcaagagctagaagtaagtttacctttc 45903217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 47397325 - 47397277
Alignment:
Q  8 tggttgagaaagtggcttctgaatttgagttactagagcacaagcttcc 56  Q
    ||||||||||  |||||||| |||||||||||||||| ||||| |||||    
T  47397325 tggttgagaacatggcttctaaatttgagttactagaacacaatcttcc 47397277  T

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Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 232
Target Start/End: Original strand, 20144790 - 20144962
Alignment:
Q  61 aaactagtgagagtaggtgaattccaaattccaagattcaaattttcatttgggcttgaaacttctcgtatgatgaaggagttaggagtgagtttacctt 160  Q
    |||| ||||| ||||||||||||  ||||||||||||||||  ||||||||||||||||||||  |  ||   | |||||||||||||||  |||||| |    
T  20144790 aaacaagtgaaagtaggtgaatttaaaattccaagattcaatgtttcatttgggcttgaaactagtgataccctaaaggagttaggagtggttttaccat 20144889  T
Q  161 tctcttctggaggtttaacaaaa-tggtggactctcttgaaggtcaagacctttctgtttccaacatatttca 232  Q
    ||| | |||||||||| |||||| |||||||||||||||  ||||||  ||||||||||||  ||||||||||    
T  20144890 tctttcctggaggtttgacaaaaatggtggactctcttgcgggtcaaagcctttctgtttctcacatatttca 20144962  T

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Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 190
Target Start/End: Original strand, 20359300 - 20359430
Alignment:
Q  61 aaactagtgagagtaggtgaattccaaattccaagattcaaattttcatttgggcttgaaacttctcgtatgatgaaggagttaggagtgagtttacctt 160  Q
    |||| ||||| ||||||||||||  ||||||||||||||||  ||||||||||||||||||||  |  ||   | |||||||||||||||| |||||| |    
T  20359300 aaacaagtgaaagtaggtgaatttaaaattccaagattcaatgtttcatttgggcttgaaactagtgataccctaaaggagttaggagtgactttaccat 20359399  T
Q  161 tctcttctggaggttt-aacaaaatggtgga 190  Q
    ||| | |||||||||| || |||||||||||    
T  20359400 tctttcctggaggtttgaaaaaaatggtgga 20359430  T

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Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 232
Target Start/End: Complemental strand, 20168984 - 20168812
Alignment:
Q  61 aaactagtgagagtaggtgaattccaaattccaagattcaaattttcatttgggcttgaaacttctcgtatgatgaaggagttaggagtgagtttacctt 160  Q
    |||| ||||| ||||||||| ||  ||||||| ||||||||  ||||||||||||||||||||  |  ||   | |||| ||||||||||| |||||| |    
T  20168984 aaacaagtgaaagtaggtgactttaaaattcctagattcaatgtttcatttgggcttgaaactagtgataccctaaaggggttaggagtgattttaccat 20168885  T
Q  161 tctcttctggaggtttaac-aaaatggtggactctcttgaaggtcaagacctttctgtttccaacatatttca 232  Q
    ||| | |||||||||| || ||||||||||| ||| | |  ||||||  ||||| ||||||  ||||||||||    
T  20168884 tctttcctggaggtttgacaaaaatggtggattctatcgcgggtcaaagcctttttgtttctcacatatttca 20168812  T

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