View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11871_high_41 (Length: 228)
Name: NF11871_high_41
Description: NF11871
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11871_high_41 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 7026651 - 7026878
Alignment:
| Q |
1 |
ctatcaaaagtattttatgattactaaactgcattaaccaggttaaatgattttccatgagactagattacctccatcatggacaatggctgcgaatgac |
100 |
Q |
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| T |
7026651 |
ctatcaaaagtattttatgattactaaactgcattaaccaggttaaatgattttccatgagactagattacctccatcatggacaatggctgcgaatgac |
7026750 |
T |
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| Q |
101 |
aagtgcgcagagatttcgttaaagattcttctggaagagatgctcttgtaaatgttgtacactgtgataatgacgaatgacaacgataaacacgagaatc |
200 |
Q |
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| T |
7026751 |
aagtgcgcagagatttcgttaaagattcttctggaagagatgctcttgtaaatgttgtacactgtgataatgacgaatgacaacgataaacacgagaatc |
7026850 |
T |
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| Q |
201 |
taagtcattttctttcctcaaactctga |
228 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
7026851 |
taagtcattttctttcctcaaactctga |
7026878 |
T |
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