View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11871_low_49 (Length: 209)

Name: NF11871_low_49
Description: NF11871
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11871_low_49
NF11871_low_49
[»] chr6 (46 HSPs)
chr6 (21-197)||(27283707-27283883)
chr6 (21-191)||(27623058-27623228)
chr6 (26-199)||(26927427-26927608)
chr6 (26-199)||(27209574-27209755)
chr6 (26-199)||(27239473-27239654)
chr6 (26-199)||(16756496-16756677)
chr6 (25-199)||(22928198-22928380)
chr6 (45-199)||(24870402-24870564)
chr6 (26-198)||(24299105-24299285)
chr6 (53-199)||(15405874-15406028)
chr6 (53-199)||(15417661-15417815)
chr6 (26-191)||(33369781-33369954)
chr6 (24-191)||(27064174-27064349)
chr6 (24-191)||(30551331-30551506)
chr6 (26-191)||(29508096-29508269)
chr6 (26-191)||(29556231-29556404)
chr6 (31-199)||(27025822-27025998)
chr6 (31-199)||(27031701-27031877)
chr6 (24-191)||(4539110-4539285)
chr6 (26-199)||(13292288-13292470)
chr6 (26-191)||(14138752-14138925)
chr6 (51-191)||(27200897-27201045)
chr6 (51-191)||(27248188-27248336)
chr6 (24-191)||(13517545-13517720)
chr6 (24-191)||(34457837-34458012)
chr6 (21-191)||(28214138-28214316)
chr6 (31-191)||(4764442-4764610)
chr6 (24-191)||(29579707-29579882)
chr6 (19-191)||(26109752-26109933)
chr6 (26-191)||(26792491-26792664)
chr6 (26-191)||(27014399-27014572)
chr6 (2-191)||(27355434-27355631)
chr6 (24-191)||(27491811-27491987)
chr6 (84-192)||(20131253-20131369)
chr6 (84-192)||(22201501-22201617)
chr6 (24-191)||(4531967-4532142)
chr6 (24-191)||(26665988-26666163)
chr6 (24-191)||(26771959-26772134)
chr6 (45-191)||(28167188-28167342)
chr6 (24-138)||(4779584-4779698)
chr6 (51-191)||(8899028-8899176)
chr6 (24-191)||(16937357-16937532)
chr6 (24-138)||(16680832-16680946)
chr6 (149-192)||(20175368-20175411)
chr6 (149-192)||(22160580-22160623)
chr6 (150-191)||(16680966-16681007)
[»] chr7 (34 HSPs)
chr7 (21-199)||(26508968-26509154)
chr7 (45-199)||(16048027-16048189)
chr7 (25-199)||(16443264-16443446)
chr7 (26-199)||(5154758-5154939)
chr7 (24-191)||(26663179-26663354)
chr7 (24-191)||(26678371-26678546)
chr7 (25-199)||(16511708-16511890)
chr7 (26-199)||(2161247-2161427)
chr7 (24-191)||(31083890-31084066)
chr7 (24-191)||(16744787-16744962)
chr7 (45-199)||(10848299-10848461)
chr7 (26-199)||(5165059-5165240)
chr7 (26-199)||(11418062-11418243)
chr7 (24-191)||(26313130-26313306)
chr7 (26-200)||(10910208-10910390)
chr7 (26-191)||(2779919-2780092)
chr7 (24-191)||(31557671-31557847)
chr7 (24-191)||(4206069-4206244)
chr7 (24-191)||(26441938-26442113)
chr7 (24-138)||(45393913-45394027)
chr7 (24-191)||(26596349-26596525)
chr7 (26-138)||(3451926-3452038)
chr7 (26-191)||(22148563-22148736)
chr7 (26-191)||(22152790-22152963)
chr7 (26-191)||(22208705-22208878)
chr7 (51-191)||(31130616-31130765)
chr7 (24-191)||(4138512-4138687)
chr7 (24-138)||(11447582-11447696)
chr7 (24-138)||(26519501-26519615)
chr7 (24-191)||(24585802-24585978)
chr7 (24-191)||(26268353-26268527)
chr7 (45-191)||(39206431-39206585)
chr7 (45-191)||(45737995-45738149)
chr7 (59-191)||(5140604-5140744)
[»] chr2 (40 HSPs)
chr2 (25-199)||(21696553-21696735)
chr2 (25-197)||(27397031-27397211)
chr2 (31-199)||(34268287-34268463)
chr2 (24-191)||(13929983-13930158)
chr2 (26-199)||(23117471-23117652)
chr2 (24-191)||(3789138-3789313)
chr2 (24-191)||(19409856-19410031)
chr2 (45-199)||(19449776-19449939)
chr2 (24-191)||(37932072-37932247)
chr2 (24-191)||(16822710-16822885)
chr2 (24-191)||(16898595-16898770)
chr2 (24-191)||(21670545-21670720)
chr2 (26-199)||(20844590-20844771)
chr2 (24-191)||(254024-254199)
chr2 (24-191)||(11628557-11628732)
chr2 (24-191)||(16168173-16168348)
chr2 (24-191)||(27810398-27810573)
chr2 (24-191)||(32056447-32056622)
chr2 (36-191)||(34297856-34298019)
chr2 (24-191)||(39896764-39896939)
chr2 (26-199)||(28888929-28889110)
chr2 (24-191)||(9343359-9343534)
chr2 (45-199)||(27427837-27428000)
chr2 (24-191)||(37679270-37679445)
chr2 (24-191)||(37694535-37694710)
chr2 (24-191)||(37945237-37945412)
chr2 (24-191)||(39045254-39045430)
chr2 (24-191)||(12593509-12593684)
chr2 (45-191)||(37384371-37384525)
chr2 (26-199)||(31868173-31868354)
chr2 (45-191)||(31882987-31883141)
chr2 (26-198)||(12662165-12662346)
chr2 (24-191)||(22921516-22921691)
chr2 (24-191)||(34161536-34161711)
chr2 (26-191)||(12709996-12710169)
chr2 (24-138)||(34868329-34868443)
chr2 (45-191)||(27123216-27123370)
chr2 (24-191)||(27782918-27783093)
chr2 (51-191)||(40240245-40240393)
chr2 (150-191)||(3790473-3790514)
[»] chr5 (51 HSPs)
chr5 (33-199)||(22895118-22895292)
chr5 (24-191)||(15752142-15752317)
chr5 (25-199)||(23898578-23898761)
chr5 (24-191)||(30036128-30036303)
chr5 (26-199)||(23726921-23727102)
chr5 (31-199)||(22992417-22992593)
chr5 (24-191)||(6880995-6881170)
chr5 (24-138)||(31819766-31819880)
chr5 (24-191)||(33523086-33523261)
chr5 (26-199)||(24608929-24609110)
chr5 (26-199)||(24976528-24976709)
chr5 (31-198)||(23632659-23632834)
chr5 (31-198)||(25206998-25207173)
chr5 (31-198)||(25271154-25271329)
chr5 (24-191)||(32589559-32589734)
chr5 (24-191)||(37351948-37352123)
chr5 (24-191)||(40466833-40467008)
chr5 (24-191)||(28953079-28953254)
chr5 (26-191)||(9544012-9544185)
chr5 (24-191)||(9324165-9324341)
chr5 (31-199)||(11556043-11556219)
chr5 (24-191)||(26487075-26487251)
chr5 (24-191)||(12138864-12139039)
chr5 (24-191)||(33881808-33881983)
chr5 (24-191)||(18494052-18494227)
chr5 (26-196)||(30941314-30941492)
chr5 (51-189)||(37745635-37745781)
chr5 (26-191)||(2517749-2517922)
chr5 (31-191)||(18121717-18121886)
chr5 (26-199)||(33299220-33299401)
chr5 (26-199)||(33784166-33784347)
chr5 (24-191)||(43084956-43085124)
chr5 (59-199)||(13180093-13180241)
chr5 (24-191)||(3796235-3796410)
chr5 (24-191)||(30158722-30158897)
chr5 (24-138)||(37761676-37761790)
chr5 (26-191)||(15652045-15652218)
chr5 (26-191)||(31438141-31438314)
chr5 (24-191)||(11330336-11330511)
chr5 (24-191)||(30175170-30175345)
chr5 (24-191)||(34623201-34623376)
chr5 (45-191)||(8658777-8658931)
chr5 (26-191)||(24730653-24730826)
chr5 (45-191)||(41681408-41681564)
chr5 (24-191)||(5644502-5644677)
chr5 (24-191)||(28655947-28656122)
chr5 (24-191)||(13318110-13318285)
chr5 (24-191)||(13435953-13436128)
chr5 (26-191)||(37664788-37664961)
chr5 (24-191)||(18368814-18368989)
chr5 (150-191)||(13178783-13178824)
[»] chr4 (28 HSPs)
chr4 (25-199)||(15234526-15234708)
chr4 (25-199)||(1906975-1907157)
chr4 (25-199)||(24585747-24585929)
chr4 (24-191)||(54840097-54840272)
chr4 (45-199)||(15276002-15276164)
chr4 (45-199)||(15379614-15379776)
chr4 (45-199)||(14671717-14671879)
chr4 (24-191)||(31119894-31120069)
chr4 (26-198)||(17019737-17019917)
chr4 (24-191)||(20331819-20331994)
chr4 (24-191)||(21976410-21976585)
chr4 (24-191)||(27156710-27156885)
chr4 (26-191)||(6576544-6576718)
chr4 (26-191)||(14752900-14753073)
chr4 (30-191)||(5012593-5012763)
chr4 (45-191)||(39857342-39857496)
chr4 (26-191)||(36323721-36323894)
chr4 (26-191)||(36337930-36338103)
chr4 (24-191)||(40099017-40099192)
chr4 (45-191)||(5701256-5701410)
chr4 (51-191)||(18794027-18794175)
chr4 (24-138)||(33667246-33667360)
chr4 (25-191)||(34182341-34182515)
chr4 (24-191)||(14105250-14105425)
chr4 (26-191)||(24119349-24119523)
chr4 (24-138)||(30760470-30760584)
chr4 (150-191)||(24814685-24814726)
chr4 (150-191)||(24813781-24813822)
[»] chr3 (60 HSPs)
chr3 (25-195)||(19701055-19701233)
chr3 (26-199)||(4728265-4728446)
chr3 (26-199)||(5658773-5658954)
chr3 (26-199)||(6208534-6208715)
chr3 (24-191)||(28109388-28109564)
chr3 (24-191)||(24334835-24335010)
chr3 (25-199)||(15886157-15886339)
chr3 (26-199)||(18057907-18058088)
chr3 (26-199)||(22381020-22381201)
chr3 (26-199)||(29142194-29142375)
chr3 (31-199)||(18337268-18337444)
chr3 (25-198)||(15367903-15368085)
chr3 (25-199)||(16422845-16423027)
chr3 (24-191)||(18231851-18232026)
chr3 (26-199)||(4790071-4790252)
chr3 (26-191)||(11103809-11103982)
chr3 (31-199)||(16617907-16618084)
chr3 (24-189)||(17978378-17978551)
chr3 (26-199)||(35887399-35887580)
chr3 (31-199)||(8282900-8283076)
chr3 (53-197)||(15734558-15734710)
chr3 (45-199)||(22041087-22041250)
chr3 (25-199)||(4690313-4690495)
chr3 (26-191)||(31029691-31029864)
chr3 (24-188)||(5717714-5717886)
chr3 (24-188)||(5728624-5728796)
chr3 (24-188)||(5763572-5763744)
chr3 (24-191)||(5020370-5020545)
chr3 (24-191)||(6536168-6536343)
chr3 (24-191)||(10649730-10649904)
chr3 (24-191)||(29658392-29658567)
chr3 (26-191)||(4340124-4340297)
chr3 (26-191)||(5473628-5473801)
chr3 (26-191)||(18285804-18285977)
chr3 (26-191)||(18301105-18301278)
chr3 (26-191)||(32445791-32445964)
chr3 (24-191)||(5589781-5589956)
chr3 (24-191)||(22864289-22864464)
chr3 (24-191)||(22879348-22879523)
chr3 (26-191)||(4423557-4423730)
chr3 (26-191)||(4630420-4630593)
chr3 (24-191)||(17970305-17970481)
chr3 (24-191)||(47030114-47030290)
chr3 (24-191)||(28345830-28346005)
chr3 (24-191)||(32297290-32297465)
chr3 (24-191)||(5602738-5602913)
chr3 (24-191)||(20570281-20570456)
chr3 (2-191)||(16404217-16404414)
chr3 (24-138)||(51788681-51788795)
chr3 (26-127)||(7079867-7079968)
chr3 (45-191)||(20072693-20072847)
chr3 (45-191)||(48472590-48472744)
chr3 (51-191)||(31957881-31958029)
chr3 (24-191)||(18249377-18249552)
chr3 (24-191)||(10402811-10402986)
chr3 (51-191)||(21681406-21681554)
chr3 (24-191)||(28027930-28028105)
chr3 (24-138)||(8218284-8218398)
chr3 (150-191)||(7080022-7080063)
chr3 (150-191)||(16599406-16599447)
[»] chr8 (25 HSPs)
chr8 (26-199)||(2130623-2130804)
chr8 (26-199)||(15774250-15774431)
chr8 (24-191)||(29836023-29836198)
chr8 (45-199)||(22074267-22074429)
chr8 (31-199)||(22139595-22139771)
chr8 (45-199)||(18797404-18797566)
chr8 (26-199)||(33249039-33249220)
chr8 (31-199)||(14569836-14570012)
chr8 (25-199)||(16260613-16260795)
chr8 (25-199)||(19654681-19654863)
chr8 (25-199)||(19694791-19694973)
chr8 (31-199)||(21341525-21341702)
chr8 (24-191)||(28355299-28355474)
chr8 (45-191)||(18716177-18716331)
chr8 (24-191)||(31483218-31483393)
chr8 (24-191)||(33265420-33265595)
chr8 (21-191)||(12086075-12086253)
chr8 (53-199)||(19910522-19910676)
chr8 (26-199)||(27602268-27602449)
chr8 (62-191)||(31361267-31361404)
chr8 (24-191)||(19201730-19201906)
chr8 (24-138)||(44567680-44567794)
chr8 (24-138)||(19681156-19681270)
chr8 (24-191)||(9361304-9361478)
chr8 (150-191)||(15775288-15775329)
[»] chr1 (15 HSPs)
chr1 (31-199)||(16201407-16201583)
chr1 (31-199)||(20333793-20333969)
chr1 (26-199)||(14692293-14692474)
chr1 (26-199)||(14694975-14695156)
chr1 (26-199)||(14697659-14697840)
chr1 (36-199)||(14700340-14700511)
chr1 (25-199)||(21891126-21891308)
chr1 (25-197)||(20467484-20467664)
chr1 (24-191)||(51644921-51645096)
chr1 (24-191)||(10951791-10951966)
chr1 (26-191)||(10969344-10969517)
chr1 (24-191)||(3647846-3648021)
chr1 (26-191)||(41786718-41786891)
chr1 (24-191)||(28591780-28591955)
chr1 (45-191)||(28156425-28156579)
[»] scaffold0109 (1 HSPs)
scaffold0109 (25-196)||(27992-28169)
[»] scaffold0093 (1 HSPs)
scaffold0093 (22-199)||(467-652)
[»] scaffold0241 (1 HSPs)
scaffold0241 (45-199)||(25946-26108)
[»] scaffold0322 (2 HSPs)
scaffold0322 (45-199)||(12769-12931)
scaffold0322 (24-191)||(2354-2529)
[»] scaffold0240 (1 HSPs)
scaffold0240 (26-196)||(24353-24531)
[»] scaffold0792 (1 HSPs)
scaffold0792 (26-199)||(3992-4173)
[»] scaffold0547 (1 HSPs)
scaffold0547 (31-199)||(9037-9214)
[»] scaffold0143 (2 HSPs)
scaffold0143 (26-198)||(33971-34151)
scaffold0143 (24-191)||(10615-10791)
[»] scaffold0038 (1 HSPs)
scaffold0038 (21-191)||(14636-14814)
[»] scaffold0237 (1 HSPs)
scaffold0237 (45-191)||(8325-8479)
[»] scaffold0159 (2 HSPs)
scaffold0159 (24-191)||(2561-2736)
scaffold0159 (24-101)||(18505-18582)
[»] scaffold0099 (1 HSPs)
scaffold0099 (26-138)||(40067-40181)
[»] scaffold0418 (1 HSPs)
scaffold0418 (26-191)||(12715-12888)
[»] scaffold0336 (1 HSPs)
scaffold0336 (24-138)||(16273-16387)
[»] scaffold0089 (1 HSPs)
scaffold0089 (26-92)||(6741-6807)


Alignment Details
Target: chr6 (Bit Score: 157; Significance: 1e-83; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 21 - 197
Target Start/End: Complemental strand, 27283883 - 27283707
Alignment:
Q  21 cataacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacgg 120  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27283883 cataacggcgttatccccagtcgggtcttccagaattctatccccagtaagttgattagctatctaccctcagccatggttccggtacgtctcccaacgg 27283784  T
Q  121 cgttatctccaaagaggacttctatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctct 197  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27283783 cgttatctccaaagaggatttctatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctct 27283707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 21 - 191
Target Start/End: Complemental strand, 27623228 - 27623058
Alignment:
Q  21 cataacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacgg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  27623228 cataacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctaccctcagccatggttctggtacgtctcccaacgg 27623129  T
Q  121 cgttatctccaaagaggacttctatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27623128 cgttatctccaaagaggatttctatgatgtagcacgagccactacgtgcccaatactctaatgtcttgtct 27623058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 26 - 199
Target Start/End: Original strand, 26927427 - 26927608
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | |||| || |||||||||||||||| ||||||||||||||||  |||||||| |||||||| ||||||||||||||||||||    
T  26927427 cggcattattcccagtagagtctcccgagattctatccccagcgagttgattagctatctatcctcagccttggttccgatacgtctcccaacggcgtta 26927526  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||||||| |||        | | || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26927527 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 26927608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 26 - 199
Target Start/End: Original strand, 27209574 - 27209755
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | |||| |||||||||||||||||||||||||  |||||| ||||||||||||||||||||| |||||||||||||| |||||    
T  27209574 cggcattattcccagtagagtctcccaagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtta 27209673  T
Q  126 tctccaaagaggactt------ctatg--atgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||||||| ||       ||||  || |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27209674 tctccaaagaggatttactggaatatgtaatctagcacgagccactacgtgcccaatactccaatgtcttgtctatctctgc 27209755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 26 - 199
Target Start/End: Complemental strand, 27239654 - 27239473
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | |||| |||||||||||||||||||||||||  |||||| ||||||||||||||||||||| |||||||||||||| |||||    
T  27239654 cggcattattcccagtagagtctcccaagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtta 27239555  T
Q  126 tctccaaagaggactt------ctatg--atgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||||||| ||       ||||  || |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27239554 tctccaaagaggatttactggaatatgtaatctagcacgagccactacgtgcccaatactccaatgtcttgtctatctctgc 27239473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 26 - 199
Target Start/End: Original strand, 16756496 - 16756677
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||| ||||||||||||||||||||||  |||||| |||||||||||||||||||||  ||||||||||||| ||| |    
T  16756496 cggcattattcccagtagagtcttccgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgacacgtctcccaacgacgtca 16756595  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||||||| |||        | | || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16756596 tctccaaagaggatttccaggaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 16756677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 25 - 199
Target Start/End: Complemental strand, 22928380 - 22928198
Alignment:
Q  25 acggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtt 124  Q
    ||||| ||||||| ||| | ||||||| ||||||||||||||||||||||  |||||| ||||||||||||||||||||| ||| ||||||||||  |||    
T  22928380 acggcattatccctagtagagtcttccgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacatctcccaacgatgtt 22928281  T
Q  125 atctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||||||||||| |||        | | || |||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  22928280 atctccaaagaggatttccaggaatgtgtaatatagcacgagccattacgtgcccaatactccagtgtcttgtctgtctctgc 22928198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 45 - 199
Target Start/End: Original strand, 24870402 - 24870564
Alignment:
Q  45 gtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc-- 142  Q
    ||||||| ||||||||||||||||||||||  |||||| ||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |||      
T  24870402 gtcttccgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttcca 24870501  T
Q  143 ------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
          | | || |||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  24870502 ggaatgtgtaatatagcacgagccattacgtgcccaatactccagtgtcttgtctgtctctgc 24870564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 26 - 198
Target Start/End: Complemental strand, 24299285 - 24299105
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||| ||||||||||||||||||||||  |||||| ||||||||||||||||||||| |||||||||||||| ||| |    
T  24299285 cggcattattcccagtagagtcttccgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtca 24299186  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctg 198  Q
    ||||||||||||| |||        | | || |||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  24299185 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactgcgtgcccaacactccagtgtcttgtctgtctctg 24299105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 199
Target Start/End: Complemental strand, 15406028 - 15405874
Alignment:
Q  53 agattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggact--------tcta 144  Q
    ||||||||||||||||||||||  |||||| ||||||||||||||||| ||| |||||||||||||| ||| |||||||||||||| |        | |     
T  15406028 agattctatccccagcaagttgcatagctacctgccctcagccatggtcccgatacgtctcccaacgacgtcatctccaaagaggattttcaggaatgtg 15405929  T
Q  145 tgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    | || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15405928 taatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 15405874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 199
Target Start/End: Complemental strand, 15417815 - 15417661
Alignment:
Q  53 agattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggact--------tcta 144  Q
    ||||||||||||||||||||||  |||||| ||||||||||||||||| ||| |||||||||||||| ||| |||||||||||||| |        | |     
T  15417815 agattctatccccagcaagttgcatagctacctgccctcagccatggtcccgatacgtctcccaacgacgtcatctccaaagaggattttcaggaatgtg 15417716  T
Q  145 tgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    | || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15417715 taatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 15417661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 26 - 191
Target Start/End: Complemental strand, 33369954 - 33369781
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||| ||||||||||||||||||||||  || ||| ||||||||||||||||||||| |||||||||||||| ||| |    
T  33369954 cggcattattcccagtagagtcttccgagattctatccccagcaagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgtca 33369855  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  33369854 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 33369781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 27064174 - 27064349
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||| |  ||  |  ||||||||||||||||||| | |||||||||||||| |||    
T  27064174 aacggcgttttccccagtcgggtcttccaagattctatctccagcaagtcgcatacttgcctgccctcagccatggttctgatacgtctcccaacgacgt 27064273  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  27064274 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 27064349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 30551506 - 30551331
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||| ||  |||||| ||||||||||| |||||||||  ||||||||||||| |||    
T  30551506 aacggcgttttccccggtcgggtcttccaagattctatccccagcaagatgcatagctacctgccctcagctatggttccgacacgtctcccaacgacgt 30551407  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || |||||||||||||||||||||||||||||  || ||||||||    
T  30551406 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatatcttgtct 30551331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 191
Target Start/End: Original strand, 29508096 - 29508269
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    ||||||||| |||||| | ||||||| |||||||||||||||||||||   || ||| ||||||||||||||||||||| |||||||||||||| ||| |    
T  29508096 cggcgttattcccagtagagtcttccgagattctatccccagcaagttacatacctacctgccctcagccatggttccgatacgtctcccaacgacgtca 29508195  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  29508196 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 29508269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 191
Target Start/End: Original strand, 29556231 - 29556404
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||| ||||||||||||||||||||||  |  ||||||||||||||||||||||||| |||||||||||||||||| |    
T  29556231 cggcattattcccagtagagtcttccgagattctatccccagcaagttgcatgcctatctgccctcagccatggttccgatacgtctcccaacggcgtca 29556330  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||| |||| |||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  29556331 tcttcaaaaaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 29556404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 31 - 199
Target Start/End: Original strand, 27025822 - 27025998
Alignment:
Q  31 ttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctcc 130  Q
    |||| |||||| | |||| |||||||||||||||||||||||||  || ||| | |||||||||| |||| ||| |||||||||||||| ||| ||||||    
T  27025822 ttattcccagtagagtctcccaagattctatccccagcaagttgcataactaccggccctcagccttggtcccgatacgtctcccaacgacgtcatctcc 27025921  T
Q  131 aaagaggact--------tctatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||||| |        | | | || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27025922 aaagaggattttcaggaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 27025998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 31 - 199
Target Start/End: Original strand, 27031701 - 27031877
Alignment:
Q  31 ttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctcc 130  Q
    |||| |||||| | ||||||| |||| |||||||||||||||||  || ||| ||||||||||||||||||||| |||||||||||||| ||| ||||||    
T  27031701 ttattcccagtagagtcttccgagatcctatccccagcaagttgcataactacctgccctcagccatggttccgatacgtctcccaacgacgtcatctcc 27031800  T
Q  131 aaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||||| |||        | | || |||||||||||| |||||||||||| ||||| ||||||||||||||||||    
T  27031801 aaagaggatttccaagaatgtgtaatatagcacgagccattacgtgcccaatgctccagtgtcttgtctgtctctgc 27031877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 4539285 - 4539110
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||||| |||||||||||   ||||  | ||||||||||||||||||||||  |||||| ||||||||||||||||||||| |||||||||||||| |||    
T  4539285 aacggcattatccccagtaaagtctctcgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgt 4539186  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  4539185 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 4539110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 26 - 199
Target Start/End: Complemental strand, 13292470 - 13292288
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattag-ctatctgccctcagccatggttccggtacgtctcccaacggcgtt 124  Q
    |||| |||| |||||| | |||| |||||||||||||||||||||||||  ||| ||| | |||||||||| |||| ||| |||||| ||||||| |||     
T  13292470 cggcattattcccagtagagtctcccaagattctatccccagcaagttgcatagactaccggccctcagccttggtcccgatacgtcccccaacgacgtc 13292371  T
Q  125 atctccaaagaggacttctatga--------tgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||||||||||| ||| | ||        | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13292370 atctccaaagaggatttccaggaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 13292288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 26 - 191
Target Start/End: Complemental strand, 14138925 - 14138752
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||| |||||||||||||||| |||||  || ||| ||||||||||||||||||||| |||||||||||||| ||| |    
T  14138925 cggcattattcccagtagagtcttccgagattctatccccagcgagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgtca 14138826  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  14138825 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 14138752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 51 - 191
Target Start/End: Original strand, 27200897 - 27201045
Alignment:
Q  51 caagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc-------- 142  Q
    ||||||||||||||||||||||||  |||||| ||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |||            
T  27200897 caagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaagg 27200996  T
Q  143 tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    | | || |||| ||||||||||||||||||||||||  |||||||||||    
T  27200997 tgtaatatagctcgagccactacgtgcccaatactctgatgtcttgtct 27201045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 51 - 191
Target Start/End: Complemental strand, 27248336 - 27248188
Alignment:
Q  51 caagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc-------- 142  Q
    ||||||||||||||||||||||||  |||||| ||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |||            
T  27248336 caagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaagg 27248237  T
Q  143 tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    | | || |||| ||||||||||||||||||||||||  |||||||||||    
T  27248236 tgtaatatagctcgagccactacgtgcccaatactctgatgtcttgtct 27248188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 13517720 - 13517545
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||||| || ||||||||| ||||||||||||||||||| |||||||||||  || ||| ||||||||||||  ||| ||| |||||||||||||| |||    
T  13517720 aacggcattttccccagtcaggtcttccaagattctatctccagcaagttgcatatctacctgccctcagcctaggtcccgatacgtctcccaacgacgt 13517621  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| || |||||||||    
T  13517620 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaacgtcttgtct 13517545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 34458012 - 34457837
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||||| || ||||||||| |||||||||||| |||||| |||||||||||  || ||| ||||||||||| |||||||||  ||||||||||||| |||    
T  34458012 aacggcattttccccagtcaggtcttccaagactctatctccagcaagttgcatatctacctgccctcagctatggttccgacacgtctcccaacgacgt 34457913  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||||||| ||||||||||||| ||||||||||||    
T  34457912 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactatgtgcccaatactctaatgtcttgtct 34457837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 21 - 191
Target Start/End: Original strand, 28214138 - 28214316
Alignment:
Q  21 cataacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacgg 120  Q
    |||||||||||| ||||||||   | ||||| |||||| ||  |||||||||||  |||||| ||||||||||||||||||||| ||||||||||||||     
T  28214138 cataacggcgttttccccagtaaagccttccgagattcaatttccagcaagttgtatagctacctgccctcagccatggttccgatacgtctcccaacga 28214237  T
Q  121 cgttatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||| |||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  28214238 cgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 28214316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 191
Target Start/End: Original strand, 4764442 - 4764610
Alignment:
Q  31 ttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctcc 130  Q
    |||||||||||   ||||  ||||||||||||||||||||||||  || ||| ||||||||||||||||||||  |||||||||||||| ||| ||||||    
T  4764442 ttatccccagtaaagtctctcaagattctatccccagcaagttgcatacctacctgccctcagccatggttccaatacgtctcccaacgacgtcatctcc 4764541  T
Q  131 aaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    |||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  4764542 aaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 4764610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 29579707 - 29579882
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||||| || ||||||||| ||||||||||||||||||| |||||||||||   | ||| | |||||| |||||||||||| |||||||||||||| |||    
T  29579707 aacggcattctccccagtcaggtcttccaagattctatctccagcaagttgcacacctaccggccctcggccatggttccgatacgtctcccaacgacgt 29579806  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     ||||||| |||||| |||        | | || ||||||| ||||||||||||||||||||| ||||||||||||    
T  29579807 catctccatagaggatttccaagaatgtgtaatatagcacgggccactacgtgcccaatactctaatgtcttgtct 29579882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 19 - 191
Target Start/End: Complemental strand, 26109933 - 26109752
Alignment:
Q  19 atcataacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctccc-aa 117  Q
    |||| |||||| |||||||||||   ||||  | ||||||||||||||||||||||  |||||| ||||||||||||||||||||| |||||||||| ||    
T  26109933 atcacaacggcattatccccagtaaagtctctcgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaaa 26109834  T
Q  118 cggcgttatctccaaagaggacttctatgatg--------tagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    || ||| |||||||||||||| ||| | || |        |||||||||||||||||||||||||||||  |||||| ||||    
T  26109833 cgacgtcatctccaaagaggatttccaagaaggtgtaacatagcacgagccactacgtgcccaatactctgatgtctcgtct 26109752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 26 - 191
Target Start/End: Original strand, 26792491 - 26792664
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||||||||||   ||||  ||||||||||||||||||||||||  || ||| ||||||||||||||||||||  |||||||||||||| |||      
T  26792491 cggcattatccccagtaaagtctctcaagattctatccccagcaagttgcatacctacctgccctcagccatggttccaatacgtctcccaacgacgtcg 26792590  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  26792591 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 26792664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 26 - 191
Target Start/End: Original strand, 27014399 - 27014572
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||| |||||||||||||||| ||| |  || ||| ||||||||||||||||||||  |||||||||||||| ||| |    
T  27014399 cggcattattcccagtagagtcttccgagattctatccccagcgagtcgcatacctacctgccctcagccatggttccaatacgtctcccaacgacgtca 27014498  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  27014499 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 27014572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 2 - 191
Target Start/End: Complemental strand, 27355631 - 27355434
Alignment:
Q  2 ccagcaatgagatggacatcataacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggtt 101  Q
    |||||| |||||||  || || ||||||||| ||||| ||  |||||  ||||||||||||||||||||||||  || ||| |||||||||||| ||| |    
T  27355631 ccagcactgagatgcccagcacaacggcgttttccccggtgaggtctctcaagattctatccccagcaagttgcatacctacctgccctcagccttggct 27355532  T
Q  102 ccggtacgtctcccaacggcgttatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||| |||||| ||||||| ||| ||||||| |||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  27355531 ccgatacgtcccccaacgacgtcatctccatagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 27355434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 27491811 - 27491987
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatcccca-gcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcg 122  Q
    ||||||||| ||||| ||  |||||  |||||||||||||||| |||||||| ||| ||| ||||||||||||||||| |||  ||||||||||||| ||    
T  27491811 aacggcgttttccccggtgaggtctctcaagattctatccccaagcaagttgtttacctacctgccctcagccatggtcccgaaacgtctcccaacgacg 27491910  T
Q  123 ttatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    | |||||||||||||| |||        | | || |||||||||| ||||||||||||||||||  |||||||||||    
T  27491911 tcatctccaaagaggatttccaagaaggtgtaatatagcacgagctactacgtgcccaatactctgatgtcttgtct 27491987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 84 - 192
Target Start/End: Original strand, 20131253 - 20131369
Alignment:
Q  84 ctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaata 175  Q
    |||||||||||||||||| || |||||||||||||| || ||||||||||||||| |||        | |||| |||||||||||||||||||||||| |    
T  20131253 ctgccctcagccatggtttcgatacgtctcccaacgacgatatctccaaagaggatttccaggaatgtgtgatatagcacgagccactacgtgcccaaca 20131352  T
Q  176 ctccaatgtcttgtctg 192  Q
    |||| ||||||||||||    
T  20131353 ctccgatgtcttgtctg 20131369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 84 - 192
Target Start/End: Complemental strand, 22201617 - 22201501
Alignment:
Q  84 ctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaata 175  Q
    |||||||||||||||||| || |||||||||||||| || ||||||||||||||| |||        | |||| |||||||||||||||||||||||| |    
T  22201617 ctgccctcagccatggtttcgatacgtctcccaacgacgatatctccaaagaggatttccaggaatgtgtgatatagcacgagccactacgtgcccaaca 22201518  T
Q  176 ctccaatgtcttgtctg 192  Q
    |||| ||||||||||||    
T  22201517 ctccgatgtcttgtctg 22201501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 4531967 - 4532142
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||||| |||||||||||   ||||  ||||||||||||||||||||||||  |||||| | ||||||||||  ||| |||  ||||||||||||| |||    
T  4531967 aacggcattatccccagtaaagtctctcaagattctatccccagcaagttgcatagctaccagccctcagcctaggtcccgaaacgtctcccaacgacgt 4532066  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || |||| ||||||||||||||||||||||||  |||||||||||    
T  4532067 catctccaaagaggatttccaagaatgtgtaatatagctcgagccactacgtgcccaatactctgatgtcttgtct 4532142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 26666163 - 26665988
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||   |||||||||||||||||| |||||||||||  || ||  |  |||||||||  ||| |||  ||||||||||||| |||    
T  26666163 aacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgcatacctgcccaccctcagcctaggtcccgaaacgtctcccaacgacgt 26666064  T
Q  124 tatctccaaagaggacttctatga--------tgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| ||| | ||        | ||||||||||||||||||||||||||||| ||||||||||||    
T  26666063 catctccaaagaggatttccaagaatgtgtcatatagcacgagccactacgtgcccaatactctaatgtcttgtct 26665988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 26772134 - 26771959
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||   |||||||||||||||||| |||||||||||  || ||  |  |||||||||  ||| |||  ||||||||||||| |||    
T  26772134 aacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgcatacctgcccaccctcagcctaggtcccgaaacgtctcccaacgacgt 26772035  T
Q  124 tatctccaaagaggacttctatga--------tgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| ||| | ||        | ||||||||||||||||||||||||||||| ||||||||||||    
T  26772034 catctccaaagaggatttccaagaatgtgtcatatagcacgagccactacgtgcccaatactctaatgtcttgtct 26771959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 45 - 191
Target Start/End: Original strand, 28167188 - 28167342
Alignment:
Q  45 gtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc-- 142  Q
    |||| |||||| ||||||||||||||||||  |||||| | ||||||||||  ||| |||  ||||||||||||| ||| |||||||||||||| |||      
T  28167188 gtctcccaagactctatccccagcaagttgcatagctaccggccctcagcctaggtcccgaaacgtctcccaacgacgtcatctccaaagaggatttcca 28167287  T
Q  143 ------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
          | | || |||||||||||||||||||||||||||||  |||||||||||    
T  28167288 agaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 28167342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 138
Target Start/End: Original strand, 4779584 - 4779698
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||   |||||||||||||||||| |||||||||||  || ||  ||||||||||||  ||| |||  ||||||||||||| |||    
T  4779584 aacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgcatacctgcctgccctcagcctaggtcccgaaacgtctcccaacgacgt 4779683  T
Q  124 tatctccaaagagga 138  Q
     ||||||||||||||    
T  4779684 catctccaaagagga 4779698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 51 - 191
Target Start/End: Complemental strand, 8899176 - 8899028
Alignment:
Q  51 caagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagagga-cttctatgatg 149  Q
    ||||| |||||||||||||||||   || ||| | |||||| |||||||||||| |||||||||||||| ||| ||||||| |||||| || | |  |||    
T  8899176 caagactctatccccagcaagttacatacctaccggccctcggccatggttccgatacgtctcccaacgacgtcatctccatagaggatctccgagaatg 8899077  T
Q  150 -------tagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
           ||||||||||||||||||||||||||||| ||||||||||||    
T  8899076 tgtaacatagcacgagccactacgtgcccaatactctaatgtcttgtct 8899028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 16937532 - 16937357
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| |||||||| | ||||  ||||| ||||||||||||||||    || ||| | |||||| |||||||||||| |||||||||||||| |||    
T  16937532 aacggcgttttccccagtggagtctctcaagactctatccccagcaagtcacatacctaccggccctcggccatggttccgatacgtctcccaacgacgt 16937433  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     ||||||| |||| |  ||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  16937432 catctccatagagaatctccgagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 16937357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 138
Target Start/End: Original strand, 16680832 - 16680946
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||| || | ||||  ||||| |||||||||||||||||   || ||| | |||||| |||||||||||| |||||||||||||| |||    
T  16680832 aacggcgttttccccggtggagtctctcaagactctatccccagcaagttacatacctaccggccctcggccatggttccgatacgtctcccaacgacgt 16680931  T
Q  124 tatctccaaagagga 138  Q
     ||||||| ||||||    
T  16680932 catctccatagagga 16680946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 192
Target Start/End: Original strand, 20175368 - 20175411
Alignment:
Q  149 gtagcacgagccactacgtgcccaatactccaatgtcttgtctg 192  Q
    ||||||||||||||||||||| ||||||||| |||||| |||||    
T  20175368 gtagcacgagccactacgtgctcaatactccgatgtctcgtctg 20175411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 192
Target Start/End: Complemental strand, 22160623 - 22160580
Alignment:
Q  149 gtagcacgagccactacgtgcccaatactccaatgtcttgtctg 192  Q
    ||||||||||||||||||||| ||||||||| |||||| |||||    
T  22160623 gtagcacgagccactacgtgctcaatactccgatgtctcgtctg 22160580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 16680966 - 16681007
Alignment:
Q  150 tagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||||| |||||||||||||  |||||||||||    
T  16680966 tagcacgagccactatgtgcccaatactctgatgtcttgtct 16681007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 130; Significance: 1e-67; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 21 - 199
Target Start/End: Complemental strand, 26509154 - 26508968
Alignment:
Q  21 cataacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacgg 120  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||     
T  26509154 cataacggcgttatccccagtcgggtcttccaagattctacccccagcaagttgattagctacctgccctcagccatggttccgatacgtctcccaacga 26509055  T
Q  121 cgttatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||||||||||||||| |||        | | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26509054 cgttatctccaaagaggatttccaggaatgtgtaatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 26508968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 45 - 199
Target Start/End: Original strand, 16048027 - 16048189
Alignment:
Q  45 gtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc-- 142  Q
    ||||||| ||||||||||||||||||||||  |||||| ||||||||||||||||||||| |||||||||||||| | |||||||||||||||| |||      
T  16048027 gtcttccgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgactttatctccaaagaggatttcca 16048126  T
Q  143 ------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
          | | || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16048127 ggaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 16048189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 25 - 199
Target Start/End: Complemental strand, 16443446 - 16443264
Alignment:
Q  25 acggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtt 124  Q
    ||||| ||||||||||  | ||||||| ||||||||||||||||||||||  |||||| |||||||||||||||| |||| |||||||||||||| ||||    
T  16443446 acggcattatccccagcagagtcttccgagattctatccccagcaagttgcatagctacctgccctcagccatggctccgatacgtctcccaacgacgtt 16443347  T
Q  125 atctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||||||||||| |||        | | || |||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  16443346 atctccaaagaggatttccaggaatgtgtaatatagcacgagccactacatgcccaatacttcaatgtcttgtctgtctctgc 16443264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 26 - 199
Target Start/End: Original strand, 5154758 - 5154939
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | |||| || ||||||||||||||||||||||  |||||| |||||||||||||||||||||  ||||||||||||| ||| |    
T  5154758 cggcattattcccagtagagtctcccgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgacacgtctcccaacgacgtca 5154857  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||||||| |||        | | || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5154858 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 5154939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 26663354 - 26663179
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||||| || ||||||||| ||||||||||||||||||| |||||||||||  || ||| ||||||||||||||||||||| |||||||||||||| |||    
T  26663354 aacggcattttccccagtcaggtcttccaagattctatctccagcaagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgt 26663255  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  26663254 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 26663179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 26678546 - 26678371
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||||| || ||||||||| ||||||||||||||||||| |||||||||||  || ||| ||||||||||||||||||||| |||||||||||||| |||    
T  26678546 aacggcattttccccagtcaggtcttccaagattctatctccagcaagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgt 26678447  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  26678446 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 26678371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 25 - 199
Target Start/End: Complemental strand, 16511890 - 16511708
Alignment:
Q  25 acggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtt 124  Q
    ||||| |||| |||||| | ||||||| ||||||||||||||||||||||  || ||| ||||||||||||||||||||| |||||||||||||| |||     
T  16511890 acggcattattcccagtagagtcttccgagattctatccccagcaagttgcataactacctgccctcagccatggttccgatacgtctcccaacgacgtc 16511791  T
Q  125 atctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||||||||||| |||        | | || ||||||||| || |||||||||||||||||| ||||||||||||||||||    
T  16511790 atctccaaagaggatttccaggaatgtgtaatatagcacgagtcattacgtgcccaatactccagtgtcttgtctgtctctgc 16511708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 26 - 199
Target Start/End: Original strand, 2161247 - 2161427
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | |||| || ||||||||||||||||||||||  |||||| |||||||||||||||||||||  ||||||||||||| |||      
T  2161247 cggcattattcccagtagagtctcccgagattctatccccagcaagttgcatagcta-ctgccctcagccatggttccgacacgtctcccaacgacgtcg 2161345  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||||||| |||        | | || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2161346 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 2161427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 31084066 - 31083890
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatcccca-gcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcg 122  Q
    ||||||||| ||||| || | ||||  |||||||||||||||| |||||||| ||||||| ||||||||||||||||||||| |||||||||||||| ||    
T  31084066 aacggcgttttccccggtggagtctctcaagattctatccccaagcaagttgtttagctacctgccctcagccatggttccgatacgtctcccaacgacg 31083967  T
Q  123 ttatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    | |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  31083966 tcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 31083890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 16744962 - 16744787
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||||| || ||||||||| ||||||||||||||||||| |||||||||||  || ||| ||||||||||| |||||||||  ||||||||||||| |||    
T  16744962 aacggcattttccccagtcaggtcttccaagattctatctccagcaagttgcatatctacctgccctcagctatggttccgtcacgtctcccaacgacgt 16744863  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  16744862 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 16744787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 45 - 199
Target Start/End: Original strand, 10848299 - 10848461
Alignment:
Q  45 gtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc-- 142  Q
    ||||||| ||||||| |||||||||||| |  |||| | | ||||||||||||||||||| |||||||||||| | |||||||||||||||||| |||      
T  10848299 gtcttccgagattctgtccccagcaagtcgcgtagcaacccgccctcagccatggttccgatacgtctcccaatgacgttatctccaaagaggatttcca 10848398  T
Q  143 ------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
          | |||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10848399 agaatgtgtgatatagcgcgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 10848461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 199
Target Start/End: Original strand, 5165059 - 5165240
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| ||||||| ||| | |||| |||||| ||||||||||||||||||  |||||| | ||||||||||  ||| ||| |||||||||||||| ||| |    
T  5165059 cggcattatccctagtagagtctcccaagactctatccccagcaagttgcatagctaccggccctcagcctaggtcccgatacgtctcccaacgacgtca 5165158  T
Q  126 tctccaaagaggacttctatga--------tgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||||||| ||| | ||        | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5165159 tctccaaagaggatttccaggaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 5165240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 199
Target Start/End: Complemental strand, 11418243 - 11418062
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | |||| |||||||||||||||||||||||||  |||||| | ||||||||||  ||| ||| |||||||||||||| ||| |    
T  11418243 cggcattattcccagtagagtctcccaagattctatccccagcaagttgcatagctaccggccctcagcctaggtcccgatacgtctcccaacgacgtca 11418144  T
Q  126 tctccaaagaggacttcta--------tgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||||||| ||| |        | || ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  11418143 tctccaaagaggatttccaggaatgcgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtctgtctctgc 11418062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 26313306 - 26313130
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatcccca-gcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcg 122  Q
    ||||||||| ||||| || | ||||  |||||||||||||||| |||||||| |||| || ||||||||||||||||||||| |||||||||||||| ||    
T  26313306 aacggcgttttccccggtggagtctctcaagattctatccccaagcaagttgtttagttacctgccctcagccatggttccgatacgtctcccaacgacg 26313207  T
Q  123 ttatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    | |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  26313206 tcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 26313130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 26 - 200
Target Start/End: Complemental strand, 10910390 - 10910208
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | |||| || ||||||||||| ||||||||||  |||||| ||||||||||||||||| ||| |||||||||||||  ||| |    
T  10910390 cggcattattcccagtagagtctcccgagattctatcctcagcaagttgcatagctacctgccctcagccatggtcccgatacgtctcccaacaacgtca 10910291  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgct 200  Q
    ||||||||||||| |||        | | || |||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  10910290 tctccaaagaggatttccaggaatgtgtaatatagcacgagccattacgtgcccaatactccagtgtcttgtctgtctctgct 10910208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 26 - 191
Target Start/End: Original strand, 2779919 - 2780092
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||| ||||||||||||||||||||||  |  ||| ||||||||||||||||||||| |||||||||||||||||| |    
T  2779919 cggcattattcccagtagagtcttccgagattctatccccagcaagttgcatgcctacctgccctcagccatggttccgatacgtctcccaacggcgtca 2780018  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||| ||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  2780019 tcttcaaagaggatttccaggaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 2780092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 31557847 - 31557671
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatcccca-gcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcg 122  Q
    ||||||||| ||||||||   |||||||||||||||||||||| |||||||| ||| ||| ||||||||||||||||||||| |||||||||||||| ||    
T  31557847 aacggcgttttccccagtaaagtcttccaagattctatccccaagcaagttgtttacctacctgccctcagccatggttccgatacgtctcccaacgacg 31557748  T
Q  123 ttatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
      |||||||||||||| |||        | | || |||||||||| ||||||||||||||||||  |||||||||||    
T  31557747 ccatctccaaagaggatttccaagaaggtgtaatatagcacgagctactacgtgcccaatactctgatgtcttgtct 31557671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 4206069 - 4206244
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||| || | ||||  ||||||||||||||||||||||||  || ||| |||||||| ||||||||||||| ||||||||||||| |||    
T  4206069 aacggcgttttccccggtggagtctctcaagattctatccccagcaagttgcatacctacctgccctcggccatggttccggcacgtctcccaacgacgt 4206168  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || |||||||||||||||||||||||| |||| ||||||||||||    
T  4206169 catctccaaagaggatttccaggaatgtgtaatatagcacgagccactacgtgcccaacactctaatgtcttgtct 4206244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 26441938 - 26442113
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||| || ||||||  ||||||||||||||||||||||||  || ||| | |||||| |||||||||||| |||||||||||||| |||    
T  26441938 aacggcgttttccccggtggggtctctcaagattctatccccagcaagttgcatacctaccggccctcggccatggttccgatacgtctcccaacgacgt 26442037  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     ||||||| |||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  26442038 catctccatagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 26442113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 24 - 138
Target Start/End: Original strand, 45393913 - 45394027
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||   |||||||||||||||||| |||||||||||  |||||| ||||||||||||||||||||| |||||||| ||||| |||    
T  45393913 aacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgcatagctacctgccctcagccatggttccgatacgtctctcaacgacgt 45394012  T
Q  124 tatctccaaagagga 138  Q
     ||||||||||||||    
T  45394013 catctccaaagagga 45394027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 26596349 - 26596525
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagcca-tggttccggtacgtctcccaacggcg 122  Q
    |||||| || ||||||||| ||||||||||||||||||| |||||||||||  || ||| ||||||||||| | ||||||||  ||||||||||||| ||    
T  26596349 aacggcattttccccagtcaggtcttccaagattctatctccagcaagttgcatatctacctgccctcagctattggttccgacacgtctcccaacgacg 26596448  T
Q  123 ttatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    | |||||||||||||| |||        | | || ||||| ||||||||||||||||||||||| ||||||||||||    
T  26596449 tcatctccaaagaggatttccaagaatgtgtaatatagcatgagccactacgtgcccaatactctaatgtcttgtct 26596525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 26 - 138
Target Start/End: Original strand, 3451926 - 3452038
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||| ||||||||||||||||||||||  || ||| |||||||||||| ||| ||||||||||||||||||| ||| |    
T  3451926 cggcattattcccagtagagtcttccgagattctatccccagcaagttgcatacctacctgccctcagccttggctccggtacgtctcccaacgacgtca 3452025  T
Q  126 tctccaaagagga 138  Q
    |||||||||||||    
T  3452026 tctccaaagagga 3452038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 26 - 191
Target Start/End: Original strand, 22148563 - 22148736
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||| |||| ||||||||||| |||||  |  ||| ||||||||||||| ||||||| |||||||||||||| ||| |    
T  22148563 cggcattattcccagtagagtcttccgagatcctatccccagccagttgcatgcctacctgccctcagccagggttccgatacgtctcccaacgacgtca 22148662  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  22148663 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 22148736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 26 - 191
Target Start/End: Original strand, 22152790 - 22152963
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||| |||| ||||||||||| |||||  |  ||| ||||||||||||| ||||||| |||||||||||||| ||| |    
T  22152790 cggcattattcccagtagagtcttccgagatcctatccccagccagttgcatgcctacctgccctcagccagggttccgatacgtctcccaacgacgtca 22152889  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  22152890 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 22152963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 26 - 191
Target Start/End: Original strand, 22208705 - 22208878
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||| |||| ||||||||||| |||||  |  ||| ||||||||||||| ||||||| |||||||||||||| ||| |    
T  22208705 cggcattattcccagtagagtcttccgagatcctatccccagccagttgcatgcctacctgccctcagccagggttccgatacgtctcccaacgacgtca 22208804  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  22208805 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 22208878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 51 - 191
Target Start/End: Original strand, 31130616 - 31130765
Alignment:
Q  51 caagattctatccccagcaagttgattagctatctgccctcagcca-tggttccggtacgtctcccaacggcgttatctccaaagaggacttc------- 142  Q
    ||||||||||||||||||||||||  |||||| ||||||||||||| |||||||  |||||||||||||| ||| |||||||||||||| |||           
T  31130616 caagattctatccccagcaagttgcatagctacctgccctcagccattggttccaatacgtctcccaacgacgtcatctccaaagaggatttccaagaat 31130715  T
Q  143 -tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     | | || |||||||||||||||||||||||||||||  |||||||||||    
T  31130716 gtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 31130765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 4138687 - 4138512
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| |||||||| | | ||  |||||||||||| |||||||||||  || ||  ||||||||||| |||||||||  ||||||||||||| |||    
T  4138687 aacggcgttttccccagtggagcctctcaagattctatctccagcaagttgcatacctgcctgccctcagctatggttccgacacgtctcccaacgacgt 4138588  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  4138587 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 4138512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 24 - 138
Target Start/End: Original strand, 11447582 - 11447696
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||   |||||||||||||||||| |||||||||||  || ||  |||||||||||| ||| |||| |||||||||||||| |||    
T  11447582 aacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgcatacctgcctgccctcagccttggctccgatacgtctcccaacgacgt 11447681  T
Q  124 tatctccaaagagga 138  Q
     ||||||||||||||    
T  11447682 catctccaaagagga 11447696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 24 - 138
Target Start/End: Original strand, 26519501 - 26519615
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||   |||||||||||||||||| |||||||||||  || ||  |||||||||||| ||| |||| |||||||||||||| |||    
T  26519501 aacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgcatacctgcctgccctcagccttggctccgatacgtctcccaacgacgt 26519600  T
Q  124 tatctccaaagagga 138  Q
     ||||||||||||||    
T  26519601 catctccaaagagga 26519615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 24585978 - 24585802
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| |||||||| | | ||  |||||||||||| |||||||||||  || ||| ||||| ||||| |||||||||  ||||||||||||| |||    
T  24585978 aacggcgttttccccagtggagcctctcaagattctatctccagcaagttgcatatctacctgccttcagctatggttccgacacgtctcccaacgacgt 24585879  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactc-caatgtcttgtct 191  Q
     |||||||||||||| |||        | | || |||||||||||||||||||||||||||||  ||||||||||||    
T  24585878 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaaatgtcttgtct 24585802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 26268527 - 26268353
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||   |||||||||||||||||| |||||||||||  || ||  |||||||||||| | | ||||  ||||||||||||| |||    
T  26268527 aacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgcatacctgcctgccctcagcc-taggtccgaaacgtctcccaacgacgt 26268429  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  26268428 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 26268353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 45 - 191
Target Start/End: Complemental strand, 39206585 - 39206431
Alignment:
Q  45 gtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc-- 142  Q
    |||| |||||||||||||| ||||||||||  |||||| | ||||||||||  ||| |||  ||||||||||||| ||| |||||||||||||| |||      
T  39206585 gtctcccaagattctatcctcagcaagttgcatagctaccggccctcagcctaggtcccgaaacgtctcccaacgacgtcatctccaaagaggatttcca 39206486  T
Q  143 ------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
          | | || |||||||||||||||||||||||||||||  |||||||||||    
T  39206485 agaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 39206431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 45 - 191
Target Start/End: Original strand, 45737995 - 45738149
Alignment:
Q  45 gtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc-- 142  Q
    |||| ||||||||||||||||||||| |||  |||||| | ||||||||||  ||| |||  ||||||||||||| ||| |||||||||||||| |||      
T  45737995 gtctcccaagattctatccccagcaaattgcatagctaccggccctcagcctaggtcccgaaacgtctcccaacgacgtcatctccaaagaggatttcca 45738094  T
Q  143 ------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
          | | || |||||||||||||||||||||||||||||  |||||||||||    
T  45738095 agaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 45738149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 191
Target Start/End: Complemental strand, 5140744 - 5140604
Alignment:
Q  59 tatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagagga-cttctatgatgt------- 150  Q
    |||||||||||||||   || ||| | |||||| |||||||||||| |||||||||||| | ||| ||||||| |||||| || | |  ||||           
T  5140744 tatccccagcaagttacatacctaccggccctcggccatggttccgatacgtctcccaatgacgtcatctccatagaggatctccgagaatgtgtaacat 5140645  T
Q  151 agcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  5140644 agcacgagccactacgtgcccaatactctaatgtcttgtct 5140604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 3e-50; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 25 - 199
Target Start/End: Complemental strand, 21696735 - 21696553
Alignment:
Q  25 acggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtt 124  Q
    ||||| ||||||||||| | | ||||| ||||||||||||||||||||||  |||||| ||||||||||||||||||||| |||||||||||||||||||    
T  21696735 acggcattatccccagtagagccttccgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacggcgtt 21696636  T
Q  125 atctccaaagaggacttctatga---tgta-----gcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||||||||||| ||| | ||   ||||     ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21696635 atctccaaagaggatttccaggaatgtgtaatattgcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 21696553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 25 - 197
Target Start/End: Original strand, 27397031 - 27397211
Alignment:
Q  25 acggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtt 124  Q
    ||||| ||||||||||  | ||||||| ||||||||||||||||||||||  |||||| ||||||||||||||||||||| |||||||||||||| ||||    
T  27397031 acggcattatccccagcggagtcttccgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtt 27397130  T
Q  125 atctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctct 197  Q
    |||||||||||||| |||        | |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27397131 atctccaaagaggatttccaagaatgtgtgatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctct 27397211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 31 - 199
Target Start/End: Complemental strand, 34268463 - 34268287
Alignment:
Q  31 ttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctcc 130  Q
    ||||||||||| | ||||||| ||||||||||||||||||||||  |||||| ||||||||||||||||||||| |||||||||||||| ||||||||||    
T  34268463 ttatccccagtagagtcttccgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctcc 34268364  T
Q  131 aaagaggacttctatg-atg-------tagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||||| ||| | | |||       ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34268363 aaagaggatttccaggaatgtgtaacatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 34268287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 13930158 - 13929983
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||| ||||| ||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||| |||    
T  13930158 aacggcgttctccccagtcaggtctcccaagattctatctccagcaagttgtttagctacctgccctcagccatggttccgatacgtctcccaacgacgt 13930059  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  13930058 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 13929983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 26 - 199
Target Start/End: Original strand, 23117471 - 23117652
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | |||| |||||||||||||||||||||||||  |||||| ||||||||||||||||||||| |||| ||||||||| ||| |    
T  23117471 cggcattattcccagtagagtctcccaagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgcctcccaacgacgtca 23117570  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||||||| |||        | | || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23117571 tctccaaagaggatttccaggaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 23117652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 3789138 - 3789313
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||  |||||| |||||||||||||||||||||  ||||||||||||| |||    
T  3789138 aacggcgttttccccagtcgggtcttccaagattctatccccagcaagatgcatagctacctgccctcagccatggttccgaaacgtctcccaacgacgt 3789237  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  3789238 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 3789313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 19410031 - 19409856
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||| ||  |||||| ||||||||||||||||||||| |||||||||||||| |||    
T  19410031 aacggcgttttccccagtggggtcttccaagattctatccccagcaagatgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgt 19409932  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     ||| |||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  19409931 catccccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 19409856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 45 - 199
Target Start/End: Complemental strand, 19449939 - 19449776
Alignment:
Q  45 gtcttccaagattctatccccagcaagttgatta-gctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttct 143  Q
    ||||||| ||||||||||||||||||||||  || |||| | ||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||    
T  19449939 gtcttccgagattctatccccagcaagttgcatatgctacccgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttct 19449840  T
Q  144 a--------tgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |        |||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19449839 aagaatgtgtgatatagcgcgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 19449776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 37932072 - 37932247
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||  |||||| |||||||||||||||||||||  ||||||||||||| |||    
T  37932072 aacggcgttttccccagtcgggtcttccaagattctatccccagcaagatgcatagctacctgccctcagccatggttccgaaacgtctcccaacgacgt 37932171  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||| |||  |||||||||||    
T  37932172 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatgctctgatgtcttgtct 37932247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 16822885 - 16822710
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||| ||  |||||| ||||||||||| |||||||||  ||||||||||||| |||    
T  16822885 aacggcgttttccccggtcgggtcttccaagattctatccccagcaagatgcatagctacctgccctcagctatggttccgacacgtctcccaacgacgt 16822786  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  16822785 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 16822710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 16898595 - 16898770
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||| ||  |||||| ||||||||||| |||||||||  ||||||||||||| |||    
T  16898595 aacggcgttttccccggtcgggtcttccaagattctatccccagcaagatgcatagctacctgccctcagctatggttccgacacgtctcccaacgacgt 16898694  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  16898695 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 16898770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 21670720 - 21670545
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||| ||||||||||||||||||| |||||||||||  || ||| ||||||||||| |||||||||  ||||||||||||| |||    
T  21670720 aacggcgttttccccagtcaggtcttccaagattctatctccagcaagttgcatatctacctgccctcagctatggttccgacacgtctcccaacgacgt 21670621  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  21670620 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 21670545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 26 - 199
Target Start/End: Original strand, 20844590 - 20844771
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||| ||||||||||||||||||||||  |||||| ||||||||||||||||||||| |||||||||||||| ||| |    
T  20844590 cggcattattcccagtagagtcttccgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtca 20844689  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||||||| || |||        | | || |||||||||||| |||||||| ||||||||| ||||||||||||||||||    
T  20844690 tctccaaagatgatttccaggaatgtgtaatatagcacgagccattacgtgcctaatactccagtgtcttgtctgtctctgc 20844771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 254199 - 254024
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||||| || ||||||||| ||||||||||||||||||| |||||||||||  || ||| ||||||||||| |||||||||  ||||||||||||| |||    
T  254199 aacggcattttccccagtcaggtcttccaagattctatctccagcaagttgtatatctacctgccctcagctatggttccgacacgtctcccaacgacgt 254100  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  254099 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 254024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 11628732 - 11628557
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||| || | ||||  ||||||||||||||||||||||||  || ||| |||||||||||||||||||||  ||||||||||||| |||    
T  11628732 aacggcgttttccccggtggagtctctcaagattctatccccagcaagttgcatacctacctgccctcagccatggttccgacacgtctcccaacgacgt 11628633  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||||||||||||||||||||    
T  11628632 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtct 11628557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 16168173 - 16168348
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||||| || ||||||||| ||||||||||||||||||| |||||||||||  || ||| ||||||||||| |||||||||  ||||||||||||| |||    
T  16168173 aacggcattttccccagtcaggtcttccaagattctatctccagcaagttgcatatctacctgccctcagctatggttccgacacgtctcccaacgacgt 16168272  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  16168273 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 16168348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 27810398 - 27810573
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||||| || ||||||||| ||||||||||||||||||| |||||||||||  || ||| ||||||||||| |||||||||  ||||||||||||| |||    
T  27810398 aacggcattttccccagtcaggtcttccaagattctatctccagcaagttgcatatctacctgccctcagctatggttccgacacgtctcccaacgacgt 27810497  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  27810498 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 27810573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 32056447 - 32056622
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||| ||  |||||| ||||||||||| |||||||||  || |||||||||| |||    
T  32056447 aacggcgttttccccggtcgggtcttccaagattctatccccagcaagatgcatagctacctgccctcagctatggttccgacacatctcccaacgacgt 32056546  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  32056547 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 32056622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 191
Target Start/End: Original strand, 34297856 - 34298019
Alignment:
Q  36 cccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaaga 135  Q
    |||||| | ||||||| ||||||||||||||||||||||  || ||| ||||||||||||||||||||| |||||||||||||| ||| |||||||||||    
T  34297856 cccagtagagtcttccgagattctatccccagcaagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaaga 34297955  T
Q  136 ggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  34297956 ggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 34298019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 39896764 - 39896939
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||   ||||||||||||||||||||||||||||||  || ||| ||||||||||||||||||||| |||||||||||||| |||    
T  39896764 aacggcgttttccccagtaaagtcttccaagattctatccccagcaagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgt 39896863  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || |||||||||||||||||||||||||| ||  |||||||||||    
T  39896864 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatattctgatgtcttgtct 39896939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 199
Target Start/End: Original strand, 28888929 - 28889110
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | |||| || ||||||||||||||||||||||  |||||| ||||||||||||||||| ||| |||||||||||||| ||| |    
T  28888929 cggcattattcccagtagagtctcccgagattctatccccagcaagttgcatagctacctgccctcagccatggtcccgatacgtctcccaacgacgtca 28889028  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||||||| |||        | | || |||||||||||||||| |||||||||||||||  ||||||||||||||||    
T  28889029 tctccaaagaggatttccaggaatgtgtaatatagcacgagccactacatgcccaatactccaacatcttgtctgtctctgc 28889110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 9343534 - 9343359
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||||| || ||||||||| ||||||||||||||||||| |||||||||||  || ||| ||||||||||| |||||||||  ||||||||||||| |||    
T  9343534 aacggcattttccccagtcaggtcttccaagattctatctccagcaagttgcatatctacctgccctcagctatggttccgacacgtctcccaacgacgt 9343435  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||| ||||||||||||||||||| ||||||||||||    
T  9343434 catctccaaagaggatttccaagaatgtgtaatatagcacgagtcactacgtgcccaatactctaatgtcttgtct 9343359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 45 - 199
Target Start/End: Complemental strand, 27428000 - 27427837
Alignment:
Q  45 gtcttccaagattctatccccagcaagttg-attagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc- 142  Q
    ||||||| ||||||| |||||||||||||| || ||||| ||||||||||||||||||||| |||||||||||||| ||| |||||||| ||||| |||     
T  27428000 gtcttccgagattctgtccccagcaagttgcataagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaggaggatttcc 27427901  T
Q  143 -------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
           | | || |||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  27427900 aggaatgtgtaatatagcacgagccattacgtgcccaatactccagtgtcttgtctgtctctgc 27427837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 37679445 - 37679270
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||||| || ||||||||| ||||||||||||||||||| |||||||||||  || ||| ||||||||||| ||||||||| |||||||||||||| |||    
T  37679445 aacggcattttccccagtcaggtcttccaagattctatctccagcaagttgcatatctacctgccctcagctatggttccgatacgtctcccaacgacgt 37679346  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     ||||||| ||||||  ||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  37679345 catctccatagaggatctccgagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 37679270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 37694710 - 37694535
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||||| || ||||||||| ||||||||||||||||||| |||||||||||  || ||| ||||||||||| ||||||||| |||||||||||||| |||    
T  37694710 aacggcattttccccagtcaggtcttccaagattctatctccagcaagttgcatatctacctgccctcagctatggttccgatacgtctcccaacgacgt 37694611  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     ||||||| ||||||  ||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  37694610 catctccatagaggatctccgagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 37694535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 37945412 - 37945237
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||||| || ||||||||| ||||||||||||||||||| |||||||||||  || ||| ||||||||||| |||||||||  || |||||||||| |||    
T  37945412 aacggcattttccccagtcaggtcttccaagattctatctccagcaagttgcatatctacctgccctcagctatggttccgacacatctcccaacgacgt 37945313  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  37945312 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 37945237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 39045430 - 39045254
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaa-gttgattagctatctgccctcagccatggttccggtacgtctcccaacggcg 122  Q
    |||||| || ||||||||| ||||||||||||||||||| ||||||| ||||  || ||| ||||||||||| |||||||||  ||||||||||||| ||    
T  39045430 aacggcattttccccagtcaggtcttccaagattctatctccagcaaagttgcatatctacctgccctcagctatggttccgacacgtctcccaacgacg 39045331  T
Q  123 ttatctccaaagaggacttctatg-atg-------tagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    | |||||||||||||| ||| | | |||       ||||||||||||||||||||||||||||| ||||||||||||    
T  39045330 tcatctccaaagaggatttccaagaatgtgtaacatagcacgagccactacgtgcccaatactctaatgtcttgtct 39045254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 12593509 - 12593684
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||||| || ||||||||| ||||||||||||||||||| |||||||||||  || ||| | |||||| |||||||||||| |||||||||||||| |||    
T  12593509 aacggcattttccccagtcaggtcttccaagattctatctccagcaagttgcatacctaccggccctcggccatggttccgatacgtctcccaacgacgt 12593608  T
Q  124 tatctccaaagagga-cttctatgatg-------tagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     ||||||| |||||| || | |  |||       ||||||||||||||||||||||||||||| ||||||||||||    
T  12593609 catctccatagaggatctccgagaatgtgtaacatagcacgagccactacgtgcccaatactctaatgtcttgtct 12593684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 45 - 191
Target Start/End: Original strand, 37384371 - 37384525
Alignment:
Q  45 gtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc-- 142  Q
    ||||||| ||||||||||||||||||||||  || ||| ||||||||||||||||||||| |||||||||||||| ||| ||||||| ||| || |||      
T  37384371 gtcttccgagattctatccccagcaagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccacagaagaattcca 37384470  T
Q  143 ------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
          | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  37384471 agaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 37384525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 26 - 199
Target Start/End: Complemental strand, 31868354 - 31868173
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||| |||||||||||||| ||||||   || ||| | ||||||||||  ||| ||| |||||||||||||| ||| |    
T  31868354 cggcattattcccagtagagtcttccgagattctatccccatcaagtttcatacctaccggccctcagcctaggtcccgatacgtctcccaacgacgtca 31868255  T
Q  126 tctccaaagaggacttctatga--------tgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||||||| ||| | ||        | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31868254 tctccaaagaggatttccaggaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 31868173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 45 - 191
Target Start/End: Original strand, 31882987 - 31883141
Alignment:
Q  45 gtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc-- 142  Q
    |||||||||||||||||| |||||||||||  || ||| |||||||||||| |||||| | |||||||||||||| ||| |||||||||||||| |||      
T  31882987 gtcttccaagattctatctccagcaagttgcatacctacctgccctcagccttggttctgatacgtctcccaacgacgtcatctccaaagaggatttcca 31883086  T
Q  143 ------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
          | | || |||||||||||||||||||||||||||||  |||||||||||    
T  31883087 agaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 31883141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 26 - 198
Target Start/End: Original strand, 12662165 - 12662346
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatcccca-gcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtt 124  Q
    |||| |||| |||||| | ||||||| ||||||||||| || ||||||||  || ||| ||||||||||||||||| ||| |||||||||||||| |||     
T  12662165 cggcattattcccagtagagtcttccgagattctatcctcaagcaagttgcatacctacctgccctcagccatggtcccgatacgtctcccaacgacgtc 12662264  T
Q  125 atctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctg 198  Q
    |||||||||||||| |||        | | || |||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  12662265 atctccaaagaggatttccaggaatgtgtaatatagcacgagccactgcgtgcccaacactccagtgtcttgtctgtctctg 12662346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 22921691 - 22921516
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| |||||||| | | ||  |||||||||||| |||||||||||  || ||| ||||||||||| |||||||||  ||||||||||||| |||    
T  22921691 aacggcgttttccccagtggagcctctcaagattctatctccagcaagttgcatatctacctgccctcagctatggttccgacacgtctcccaacgacgt 22921592  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  22921591 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 22921516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 34161536 - 34161711
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||| || | ||||  ||||||||||||||||||||||||  || ||| | |||||||||| ||| || | |||||||||||||| |||    
T  34161536 aacggcgttttccccggtggagtctctcaagattctatccccagcaagttgcatacctaccagccctcagccttggctctgatacgtctcccaacgacgt 34161635  T
Q  124 tatctccaaagaggacttctatg-atg-------tagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| ||| | | |||       ||||||||||||||||||||||||||||| ||||||||||||    
T  34161636 catctccaaagaggatttccaagaatgtgtaacatagcacgagccactacgtgcccaatactctaatgtcttgtct 34161711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 26 - 191
Target Start/End: Complemental strand, 12710169 - 12709996
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||||||||||   ||||  |||||||||||||||||||||| |  || ||| ||||||||||||||||||||  |||||||||||||| ||| |    
T  12710169 cggcattatccccagtaaagtctctcaagattctatccccagcaagtggcatacctacctgccctcagccatggttccaatacgtctcccaacgacgtca 12710070  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||| |||        | | || ||||||| |||||||||||||||||||||  |||||||||||    
T  12710069 tctccaaagaggatttccaagaatgtgtaatatagcacgggccactacgtgcccaatactctgatgtcttgtct 12709996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 24 - 138
Target Start/End: Original strand, 34868329 - 34868443
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||   |||||||||||||||||| |||||||||||  || ||  |||||||||||| ||| |||| |||||||||||||| |||    
T  34868329 aacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgcatacctgcctgccctcagccttggctccgatacgtctcccaacgacgt 34868428  T
Q  124 tatctccaaagagga 138  Q
     ||||||||||||||    
T  34868429 catctccaaagagga 34868443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 45 - 191
Target Start/End: Original strand, 27123216 - 27123370
Alignment:
Q  45 gtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc-- 142  Q
    |||| |||||||||||||||||||||||||  |||||| | ||||||||||  ||| |||  ||||||||||||| ||| |||||||||||||| |||      
T  27123216 gtctcccaagattctatccccagcaagttgcatagctaccggccctcagcctaggtcccgaaacgtctcccaacgacgtcatctccaaagaggatttcca 27123315  T
Q  143 ------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
          | | || |||||||||||||||||||||||||||||  |||||||||||    
T  27123316 agaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 27123370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 27782918 - 27783093
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| | |||||| | ||||  |||||||||||||||||||||||   || ||| | |||||| |||||||||||| ||||||| |||||| | |    
T  27782918 aacggcgtttttcccagtggagtctctcaagattctatccccagcaagttacatacctaccggccctcggccatggttccgatacgtctaccaacgacat 27783017  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     ||||||| |||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  27783018 catctccatagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 27783093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 191
Target Start/End: Original strand, 40240245 - 40240393
Alignment:
Q  51 caagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagagga-cttctatgatg 149  Q
    ||||| |||||||||||||||||   || ||| | |||||| |||||||||||| |||||||||||||| ||| ||||||| |||||| || | |  |||    
T  40240245 caagactctatccccagcaagttacatacctaccggccctcggccatggttccgatacgtctcccaacgacgtcatctccatagaggatctccgagaatg 40240344  T
Q  150 -------tagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
           ||||||||||||||||||||||||||||| || |||||||||    
T  40240345 tgtaacatagcacgagccactacgtgcccaatactctaacgtcttgtct 40240393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 3790473 - 3790514
Alignment:
Q  150 tagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||| ||||||||||||||| ||||||||||||    
T  3790473 tagcacgagccaccacgtgcccaatactctaatgtcttgtct 3790514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 2e-48; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 33 - 199
Target Start/End: Original strand, 22895118 - 22895292
Alignment:
Q  33 atccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaa 132  Q
    ||||||||| | ||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  22895118 atccccagtagagtcttccgagattctatccccagcaagttgcatagctatctgccctcagccatggttccgatacgtctcccaacgacgttatctccaa 22895217  T
Q  133 agaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||| |||        | | || |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22895218 agaggatttccaggaatgtgtaatatagcacgagccactacgtgcccaatactccaatgacttgtctgtctctgc 22895292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 15752317 - 15752142
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||  |||||| ||||||||||||||||||||| |||||||||||||| |||    
T  15752317 aacggcgttttccccagtcgggtcttccaagattctatccccagcaagatgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgt 15752218  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     ||| |||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  15752217 catccccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 15752142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 25 - 199
Target Start/End: Original strand, 23898578 - 23898761
Alignment:
Q  25 acggcgttatccccagtcgggtcttccaagattctatcccca-gcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||| ||||||||||| | ||||||| |||||||||||||| ||||||||  |||||| ||||||||||||||||||||| |||||||||||||| |||    
T  23898578 acggcattatccccagtagagtcttccgagattctatccccaagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgt 23898677  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||||||||| |||        | | || |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23898678 tatctccaaagaggatttccaggaatgtgtaatatagcacgagccattacgtgcccaatactccaatgtcttgtctgtctctgc 23898761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 30036128 - 30036303
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||  |||||| ||||||||||||||||||||| |||||||||||||| |||    
T  30036128 aacggcgttttccccagtcgggtcttccaagattctatccccagcaagatgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgt 30036227  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     ||| |||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  30036228 catccccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 30036303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 26 - 199
Target Start/End: Original strand, 23726921 - 23727102
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | |||| || ||||||||||||||||||||||  |||||| ||||||||||||||||| ||| |||||||||||||| ||| |    
T  23726921 cggcattattcccagtagagtctcccgagattctatccccagcaagttgcatagctacctgccctcagccatggtcccgatacgtctcccaacgacgtca 23727020  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||||||| |||        | | || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23727021 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 23727102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 31 - 199
Target Start/End: Complemental strand, 22992593 - 22992417
Alignment:
Q  31 ttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctcc 130  Q
    |||| |||||| | |||| || ||||||||||||||||||||||  |||||| |||||||||||||||||||||  ||||||||||||| ||| ||||||    
T  22992593 ttattcccagtagagtctcccgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgacacgtctcccaacgacgtcatctcc 22992494  T
Q  131 aaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||||| |||        | | || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22992493 aaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 22992417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 6880995 - 6881170
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||||| |||||| | ||||||| ||||||||||||||||||||||  || ||| ||||||||||||||||||||| |||||||||||||| |||    
T  6880995 aacggcgttattcccagtagagtcttccgagattctatccccagcaagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgt 6881094  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  6881095 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 6881170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 24 - 138
Target Start/End: Complemental strand, 31819880 - 31819766
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||  || ||| ||||||||||||||||||||| |||||||||||||| |||    
T  31819880 aacggcgttttccccagtcgggtcttccaagattctatctccagcaagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgt 31819781  T
Q  124 tatctccaaagagga 138  Q
     ||||||||||||||    
T  31819780 catctccaaagagga 31819766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 33523086 - 33523261
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||| ||  |||||| ||||||||||| |||||||||  ||||||||||||| |||    
T  33523086 aacggcgttttccccggtcgggtcttccaagattctatccccagcaagatgcatagctacctgccctcagctatggttccgacacgtctcccaacgacgt 33523185  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  33523186 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 33523261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 26 - 199
Target Start/End: Original strand, 24608929 - 24609110
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||| ||||||||||||||||||||||  || ||| ||||||||||||||||||||| |||||||| ||||| ||| |    
T  24608929 cggcattattcccagtagagtcttccgagattctatccccagcaagttgcataactacctgccctcagccatggttccgatacgtctctcaacgacgtca 24609028  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||||||| |||        | | || |||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  24609029 tctccaaagaggatttccaggaatgtgtaatatagcacgagccattacgtgcccaatactccagtgtcttgtctgtctctgc 24609110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 26 - 199
Target Start/End: Original strand, 24976528 - 24976709
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||| ||||||||||||||||||||||  || ||| ||||||||||||||||||||| |||||||||||||| ||| |    
T  24976528 cggcattattcccagtagagtcttccgagattctatccccagcaagttgcataactacctgccctcagccatggttccgatacgtctcccaacgacgtca 24976627  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||||||| |||        | | || |||||||||||||| ||||||||| |||||| ||||||||||||||||||    
T  24976628 tctccaaagaggatttccaggaatgtgtaatatagcacgagccactgcgtgcccaacactccagtgtcttgtctgtctctgc 24976709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 198
Target Start/End: Original strand, 23632659 - 23632834
Alignment:
Q  31 ttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctcc 130  Q
    |||| |||||| | ||||||| ||||||||||||||||||||||  |||||||||||||||||||||||| ||| |||||||||||||| ||| ||||||    
T  23632659 ttattcccagtagagtcttccgagattctatccccagcaagttgcatagctatctgccctcagccatggtcccgatacgtctcccaacgacgtcatctcc 23632758  T
Q  131 aaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctg 198  Q
    |||||||| |||        | | || |||||||||||||  ||||||||| |||||| |||||||||||||||||    
T  23632759 aaagaggatttccaagaatgtgtaatatagcacgagccaccgcgtgcccaacactccagtgtcttgtctgtctctg 23632834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 198
Target Start/End: Original strand, 25206998 - 25207173
Alignment:
Q  31 ttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctcc 130  Q
    |||||| |||| | ||||||| ||||||||||||||||||||||  |||||| |||||||||||| |||||| | |||||||||| ||| ||||||||||    
T  25206998 ttatcctcagtagagtcttccgagattctatccccagcaagttgcatagctacctgccctcagccctggttctgatacgtctcccgacgacgttatctcc 25207097  T
Q  131 aaagaggact--------tctatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctg 198  Q
    |||||||| |        | | | |||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  25207098 aaagaggattcccaggaatgtgtaatgtagcacgagccactacgtgcccaatactccaatgtcttgactatctctg 25207173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 198
Target Start/End: Original strand, 25271154 - 25271329
Alignment:
Q  31 ttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctcc 130  Q
    |||||| |||| | ||||||| ||||||||||||||||||||||  |||||| |||||||||||| |||||| | |||||||||| ||| ||||||||||    
T  25271154 ttatcctcagtagagtcttccgagattctatccccagcaagttgcatagctacctgccctcagccctggttctgatacgtctcccgacgacgttatctcc 25271253  T
Q  131 aaagaggact--------tctatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctg 198  Q
    |||||||| |        | | | |||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  25271254 aaagaggattcccaggaatgtgtaatgtagcacgagccactacgtgcccaatactccaatgtcttgactatctctg 25271329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 32589734 - 32589559
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||| ||||| ||||||||||||| |||||||||||  || ||| ||||||||||| |||||||||  ||||||||||||| |||    
T  32589734 aacggcgttctccccagtcaggtctcccaagattctatctccagcaagttgtatatctacctgccctcagctatggttccgacacgtctcccaacgacgt 32589635  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     ||| |||||||||| |||        | | || ||||||||||||||||||||||||||||||||||||||||||    
T  32589634 catccccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtct 32589559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 37352123 - 37351948
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||||| |||||||||||   ||||  | ||||||||||||||||||||||  |||||| ||||||||||||||||||||| |||||||||||||| |||    
T  37352123 aacggcattatccccagtaaagtctctcgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgt 37352024  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  37352023 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 37351948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 40467008 - 40466833
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||||| || ||||||||| ||||||||||||||||||| |||||||||||  || ||| ||||||||||| |||||||||  ||||||||||||| |||    
T  40467008 aacggcattttccccagtcaggtcttccaagattctatctccagcaagttgcatatctacctgccctcagctatggttccgacacgtctcccaacgacgt 40466909  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  40466908 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 40466833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 28953254 - 28953079
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||   ||||||| ||||||| ||||||||||| ||  |||||| ||||||||||||||||| ||| |||||||||||||| |||    
T  28953254 aacggcgttttccccagtaaagtcttccgagattctgtccccagcaagatgcatagctacctgccctcagccatggtcccgatacgtctcccaacgacgt 28953155  T
Q  124 tatctccaaagaggactt------ctatg--atgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| ||       ||||  || ||||||||||||||||||||||||||||||||||||||||||    
T  28953154 catctccaaagaggattttcaagaatatgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtct 28953079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 191
Target Start/End: Complemental strand, 9544185 - 9544012
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||| |||||||||||||||| |||||  || ||| ||||||||||||||||||||| |||||||||||||| ||| |    
T  9544185 cggcattattcccagtagagtcttccgagattctatccccagcgagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgtca 9544086  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  9544085 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 9544012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 9324165 - 9324341
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatcccca-gcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcg 122  Q
    ||||||||| ||||| || | ||||  |||||||||||||||| |||||||| |||| || ||||||||||||||||||||| |||||||||||||| ||    
T  9324165 aacggcgttttccccggtggagtctctcaagattctatccccaagcaagttgtttagttacctgccctcagccatggttccgatacgtctcccaacgacg 9324264  T
Q  123 ttatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    | |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  9324265 tcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 9324341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 31 - 199
Target Start/End: Original strand, 11556043 - 11556219
Alignment:
Q  31 ttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctcc 130  Q
    |||| |||||| | |||| |||||| ||||||||||||||||||  |||||| | ||||||||||  ||| ||| |||||||||||||| ||| ||||||    
T  11556043 ttattcccagtagagtctcccaagactctatccccagcaagttgcatagctaccggccctcagcctaggtcccgatacgtctcccaacgacgtcatctcc 11556142  T
Q  131 aaagaggacttctatga--------tgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||||| ||| | ||        | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11556143 aaagaggatttccaggaatgcgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 11556219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 26487075 - 26487251
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatcccca-gcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcg 122  Q
    ||||||||| ||||| || | ||||  |||||||||||||||| |||||||| |||| || ||||||||||||||||||||| |||||||||||||| ||    
T  26487075 aacggcgttttccccggtggagtctctcaagattctatccccaagcaagttgtttagttacctgccctcagccatggttccgatacgtctcccaacgacg 26487174  T
Q  123 ttatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    | |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  26487175 tcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 26487251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 12138864 - 12139039
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||   |||||||||||||||||| |||||||||||  || ||  |||||||||||| ||| |||| |||||||||||||| |||    
T  12138864 aacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgcatacctgcctgccctcagccttggctccgatacgtctcccaacgacgt 12138963  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  12138964 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 12139039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 33881808 - 33881983
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||||| || ||||||||| ||||||||||||||||||| |||||||||||  || ||| ||||||||||||  ||| ||| |||||||||||||| |||    
T  33881808 aacggcattttccccagtcaggtcttccaagattctatctccagcaagttgcatatctacctgccctcagcctaggtcccgatacgtctcccaacgacgt 33881907  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| || |||||||||    
T  33881908 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaacgtcttgtct 33881983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 18494227 - 18494052
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||| || | |||| |||||||||||||||||||||||||  ||||||   ||||||||||||||||||| |||||||||||||| |||    
T  18494227 aacggcgttttccccggtagagtctcccaagattctatccccagcaagttgcatagctactggccctcagccatggttccgatacgtctcccaacgacgt 18494128  T
Q  124 tatctccaaagaggacttctatg-atg-------tagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| ||| | | |||       ||||||||||||||| |||||||||||||  |||||||||||    
T  18494127 catctccaaagaggatttccaagaatgtgtaacatagcacgagccactatgtgcccaatactctgatgtcttgtct 18494052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 26 - 196
Target Start/End: Original strand, 30941314 - 30941492
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | |||| || ||||||||||| ||||||||||  |||||| ||||||||||||||||| ||| |||||||||||||| ||| |    
T  30941314 cggcattattcccagtagagtctcccgagattctatcctcagcaagttgcatagctacctgccctcagccatggtcccgatacgtctcccaacgacgtca 30941413  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctc 196  Q
    ||||||||||||| |||        | | || ||||||||||||||  ||||||||||||||| |||||||||||||||    
T  30941414 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactgtgtgcccaatactccagtgtcttgtctgtctc 30941492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 51 - 189
Target Start/End: Complemental strand, 37745781 - 37745635
Alignment:
Q  51 caagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc-------- 142  Q
    |||||||||||||||||| |||||  |||||| ||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |||            
T  37745781 caagattctatccccagcgagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaagg 37745682  T
Q  143 tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgt 189  Q
    | | || |||||||||||||||||||||||||||||  |||||||||    
T  37745681 tgtaatatagcacgagccactacgtgcccaatactctgatgtcttgt 37745635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 26 - 191
Target Start/End: Original strand, 2517749 - 2517922
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||||||||||   ||||| |||||||||||| |||||||||||  || ||  |||||||||||| ||| ||||||||||||||||||| ||| |    
T  2517749 cggcattatccccagtaaagtctttcaagattctatctccagcaagttgcatacctgcctgccctcagccgtggctccggtacgtctcccaacgacgtca 2517848  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  2517849 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 2517922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 31 - 191
Target Start/End: Complemental strand, 18121886 - 18121717
Alignment:
Q  31 ttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctcc 130  Q
    |||| |||||| | |||| || ||||||||||||||||||||||  |||||| |||||||||||| ||||||||  ||||||||||||| ||| ||||||    
T  18121886 ttattcccagtagagtctcccgagattctatccccagcaagttgcatagctacctgccctcagccttggttccgacacgtctcccaacgacgtcatctcc 18121787  T
Q  131 aaagaggacttcta--------tgatgtagcacgagccactacgtgcccaatactc-caatgtcttgtct 191  Q
    |||||||| ||| |        |||| |||||||||||||||||||||||||||||  ||||||||||||    
T  18121786 aaagaggatttccaggaatgcgtgatatagcacgagccactacgtgcccaatactctaaatgtcttgtct 18121717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 26 - 199
Target Start/End: Original strand, 33299220 - 33299401
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | |||| || | ||||||||||||||||||||  |||||| | |||||| |||  ||| ||| |||||||||||||| ||| |    
T  33299220 cggcattattcccagtagagtctcccgatattctatccccagcaagttgcatagctaccggccctccgcctaggtcccgatacgtctcccaacgacgtca 33299319  T
Q  126 tctccaaagaggacttctatga--------tgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||||||| ||| | ||        | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33299320 tctccaaagaggatttccaggaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 33299401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 26 - 199
Target Start/End: Original strand, 33784166 - 33784347
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | |||| || ||||||||||||||||||||||  |||||| | ||||||| |   ||| ||| |||||||||||||| ||| |    
T  33784166 cggcattattcccagtagagtctcccgagattctatccccagcaagttgcatagctaccggccctcaacttaggtcccgatacgtctcccaacgacgtca 33784265  T
Q  126 tctccaaagaggacttctatga--------tgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||||||| ||| | ||        | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33784266 tctccaaagaggatttccaggaatgcgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 33784347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 43084956 - 43085124
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||| || | ||||  ||||| |||||||||||||||||   || ||| | |||||| |||||||||||| |||||||||||||| |||    
T  43084956 aacggcgttttccccggtggagtctctcaagactctatccccagcaagttacatacctaccggccctcggccatggttccgatacgtctcccaacgacgt 43085055  T
Q  124 tatctccaaagaggacttctatga-tgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     ||||||| |||||| ||| | || | |||||||||||| |||||||||||||||| ||||||||||||    
T  43085056 catctccagagaggatttccaagaatatagcacgagccattacgtgcccaatactctaatgtcttgtct 43085124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 13180241 - 13180093
Alignment:
Q  59 tatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttctatga--------tgt 150  Q
    |||||||||| |||||  || ||| ||||||||||||||||| ||| |||||||||||||| ||| |||||||||||||| ||| | ||        | |    
T  13180241 tatccccagcgagttgcatacctacctgccctcagccatggtcccgatacgtctcccaacgacgtcatctccaaagaggatttccaggaatgtgtaatat 13180142  T
Q  151 agcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13180141 agcacgagccactacgtgcccaatactccagtgtcttgtctgtctctgc 13180093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 3796235 - 3796410
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||   |||||||||||||||||| |||||||||||  || ||  |||||||||||| ||| |||| |||||||||||||| |||    
T  3796235 aacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgcatacctgcctgccctcagccttggctccgatacgtctcccaacgacgt 3796334  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||| ||| ||||||||||||    
T  3796335 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatgctctaatgtcttgtct 3796410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 30158722 - 30158897
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||||| || |||||||||  |||||||||||||||||| |||||||||||  || ||| ||  |||||||| |||||| | |||||||||||||| |||    
T  30158722 aacggcattttccccagtcaagtcttccaagattctatctccagcaagttgcatacctacctatcctcagccttggttctgatacgtctcccaacgacgt 30158821  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  30158822 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 30158897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 24 - 138
Target Start/End: Original strand, 37761676 - 37761790
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||   |||||||||||||||||| |||||||||||   ||||| ||||||||||||||||||||| |||||||||||||| |||    
T  37761676 aacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgcacagctacctgccctcagccatggttccgatacgtctcccaacgacgt 37761775  T
Q  124 tatctccaaagagga 138  Q
     |||| |||||||||    
T  37761776 catcttcaaagagga 37761790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 26 - 191
Target Start/End: Complemental strand, 15652218 - 15652045
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | |||| || ||||||||||||||||||||||  |||||| |||||||||||| ||||| ||  ||||||||||||| | | |    
T  15652218 cggcattattcccagtagagtctcccgagattctatccccagcaagttgcatagctacctgccctcagccttggtttcgacacgtctcccaacgacatca 15652119  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  15652118 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 15652045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 26 - 191
Target Start/End: Original strand, 31438141 - 31438314
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||||||||||   ||||  ||||||||||||||||||||||||  ||  || ||||||||||||||||||||  |||||||||||||| ||| |    
T  31438141 cggcattatccccagtaaagtctctcaagattctatccccagcaagttgcatacttacctgccctcagccatggttccaatacgtctcccaacgacgtca 31438240  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  31438241 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 31438314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 11330336 - 11330511
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||||| || ||||||||| |||||  ||||| |||||||||||||||||   || ||| | |||||| |||||||||||| |||||||||||||| |||    
T  11330336 aacggcattttccccagtcaggtctctcaagactctatccccagcaagttacatacctaccggccctcggccatggttccgatacgtctcccaacgacgt 11330435  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||| ||||||||||||||||| ||||||||||||    
T  11330436 catctccaaagaggatttccaagaatgtgtaatatagcacgagccgctacgtgcccaatactctaatgtcttgtct 11330511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 30175170 - 30175345
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| |||||||| | | ||  |||||||||||| |||||||||||  || ||| ||||||||||| |||||||||  ||||||||||||| |||    
T  30175170 aacggcgttttccccagtggagcctctcaagattctatctccagcaagttgcatatctacctgccctcagctatggttccgacacgtctcccaacgacgt 30175269  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     ||||||||||| || |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  30175270 catctccaaagaagatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 30175345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 34623201 - 34623376
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||| || | ||||  ||||||||||||||||||||||||  || ||| |||||| ||||| ||| |||| |||||||||||||| |||    
T  34623201 aacggcgttttccccggtggagtctctcaagattctatccccagcaagttgcatacctacctgcccccagccttggctccgatacgtctcccaacgacgt 34623300  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  34623301 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 34623376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 45 - 191
Target Start/End: Complemental strand, 8658931 - 8658777
Alignment:
Q  45 gtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc-- 142  Q
    ||||||| |||||||||  |||||||||||  |||||| ||||||||||||||||||||| ||||||||||| || ||| |||||||||||||| |||      
T  8658931 gtcttccgagattctatttccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccagcgacgtcatctccaaagaggatttcca 8658832  T
Q  143 ------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
          | | || |||||||||||||||||||||||| ||||  |||||||||||    
T  8658831 agaatgtgtaatatagcacgagccactacgtgcccaacactctgatgtcttgtct 8658777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 26 - 191
Target Start/End: Original strand, 24730653 - 24730826
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||||||||||   ||||  |||||||||||||||||||||| |  || ||| ||||||||||||||||||||  |||||||||||||| ||| |    
T  24730653 cggcattatccccagtaaagtctctcaagattctatccccagcaagtggcatacctacctgccctcagccatggttccaatacgtctcccaacgacgtca 24730752  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||| |||        | | || ||||||| |||||||||||||||||||||  |||||||||||    
T  24730753 tctccaaagaggatttccaagaatgtgtaatatagcacgggccactacgtgcccaatactctgatgtcttgtct 24730826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 45 - 191
Target Start/End: Original strand, 41681408 - 41681564
Alignment:
Q  45 gtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttct- 143  Q
    ||||||| ||||||||||||||||||||||  ||| || |||||||||| ||||||||||  ||||||||||||| ||| |||||||||||||| || |     
T  41681408 gtcttccgagattctatccccagcaagttgcatagttacctgccctcagtcatggttccgacacgtctcccaacgacgtcatctccaaagaggatttttc 41681507  T
Q  144 -----atg----atgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
         |||    || ||||||||||||||||||||||||||||| |||| |||||||    
T  41681508 caagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgacttgtct 41681564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 5644502 - 5644677
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| |||||||| | | ||  ||||||||| ||  ||||||||||  || ||| ||||||||||| |||||||||  ||||||||||||| |||    
T  5644502 aacggcgttttccccagtggagcctctcaagattctgtctacagcaagttgcatatctacctgccctcagctatggttccgacacgtctcccaacgacgt 5644601  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  5644602 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 5644677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 28655947 - 28656122
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||| || | ||||  ||||||||||||||||||||| ||  || ||| |||||||||||| ||  |||| |||||||||||||| |||    
T  28655947 aacggcgttttccccggtggagtctctcaagattctatccccagcaaggtgcatacctacctgccctcagccttgactccgatacgtctcccaacgacgt 28656046  T
Q  124 tatctccaaagaggacttctatg-atg-------tagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     ||||||||||| || ||| | | |||       ||||||||||||||||||||||||||||| ||||||||||||    
T  28656047 catctccaaagaagatttccaagaatgtgtaacatagcacgagccactacgtgcccaatactctaatgtcttgtct 28656122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 13318285 - 13318110
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||   |||||||||||||||||| |||||||||||  || ||  ||||||||||||  ||| |||  ||||||||||||| |||    
T  13318285 aacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgcatacctgcctgccctcagcctaggtcccgaaacgtctcccaacgacgt 13318186  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || |||||||||||||||||||||||||| ||  |||||||||||    
T  13318185 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatattctgatgtcttgtct 13318110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 13436128 - 13435953
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||| || | ||||  ||||||||||||||||||||||||  || ||| | |||||||||| ||| || | |||||||||||| | |||    
T  13436128 aacggcgttttccccggtggagtctctcaagattctatccccagcaagttgcatacctaccagccctcagccttggctctgatacgtctcccaatgacgt 13436029  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  13436028 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 13435953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 26 - 191
Target Start/End: Complemental strand, 37664961 - 37664788
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    ||||||| ||||||||   ||||| |||||||||||| |||||||||||  || ||  |  ||||||||| ||||||||  ||||||||||||| ||| |    
T  37664961 cggcgttttccccagtaaagtctttcaagattctatctccagcaagttgcatacctgcccaccctcagccttggttccgaaacgtctcccaacgacgtca 37664862  T
Q  126 tctccaaagaggacttctatga--------tgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||| ||| | ||        | ||||||||||||||||||||||||||||| || |||||||||    
T  37664861 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaacgtcttgtct 37664788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 18368989 - 18368814
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| |||||||| | ||||  ||||  |||||||||||||||||   || ||| | |||||| |||||||||||| |||||||||||||| |||    
T  18368989 aacggcgttttccccagtggagtctctcaaggctctatccccagcaagttacatacctaccggccctcggccatggttccgatacgtctcccaacgacgt 18368890  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     ||||||| |||| |  ||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  18368889 catctccatagagaatctccgagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 18368814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 13178824 - 13178783
Alignment:
Q  150 tagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||| ||||||||||||||| ||||||||||||    
T  13178824 tagcacgagccaccacgtgcccaatactctaatgtcttgtct 13178783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 4e-46; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 25 - 199
Target Start/End: Original strand, 15234526 - 15234708
Alignment:
Q  25 acggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtt 124  Q
    ||||| ||||||||||  | ||||||| ||||||||||||||||||||||  |||||| |||||||||| |||||||||| |||||||||||||| ||||    
T  15234526 acggcattatccccagcagagtcttccgagattctatccccagcaagttgcatagctacctgccctcagtcatggttccgatacgtctcccaacgacgtt 15234625  T
Q  125 atctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||||||||||| |||        | | || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15234626 atctccaaagaggatttccaggaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 15234708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 25 - 199
Target Start/End: Original strand, 1906975 - 1907157
Alignment:
Q  25 acggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtt 124  Q
    ||||| ||||||||||| | | ||||| ||||||||||||||||||||||  |||||| |||||||||| |||||||||| |||||||||||| | ||||    
T  1906975 acggcattatccccagtagagccttccgagattctatccccagcaagttgcatagctacctgccctcagtcatggttccgatacgtctcccaatgacgtt 1907074  T
Q  125 atctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||||||||||| |||        | | || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1907075 atctccaaagaggatttccaggaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 1907157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 25 - 199
Target Start/End: Complemental strand, 24585929 - 24585747
Alignment:
Q  25 acggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtt 124  Q
    ||||| |||| |||||| | |||| || ||||||||||||||||||||||  |||||||||||||||||||||||| ||| |||||||||||||| |||     
T  24585929 acggcattattcccagtagagtctcccgagattctatccccagcaagttgcatagctatctgccctcagccatggtcccgatacgtctcccaacgacgtc 24585830  T
Q  125 atctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||||||||||| |||        | | || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24585829 atctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 24585747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 54840097 - 54840272
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||  || ||| |||||||||||||||||||||  ||||||||||||| |||    
T  54840097 aacggcgttttccccagtcgggtcttccaagattctatctccagcaagttgcatacctacctgccctcagccatggttccgaaacgtctcccaacgacgt 54840196  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || |||||||||||||||||||||||||| |||||||||||||||    
T  54840197 catctccaaagaggatttccaggaatgtgtaatatagcacgagccactacgtgcccaataatccaatgtcttgtct 54840272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 45 - 199
Target Start/End: Complemental strand, 15276164 - 15276002
Alignment:
Q  45 gtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc-- 142  Q
    ||||||| ||||||| |||||||||||| |  |||||| ||||||||||||||||||||| |||||||||||||  |||||||||||||||||| |||      
T  15276164 gtcttccgagattctgtccccagcaagtcgcatagctacctgccctcagccatggttccgatacgtctcccaacaacgttatctccaaagaggatttcca 15276065  T
Q  143 ------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
          | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15276064 agaatgtgtgatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 15276002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 45 - 199
Target Start/End: Complemental strand, 15379776 - 15379614
Alignment:
Q  45 gtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc-- 142  Q
    ||||||| ||||||||||||||||||||||  |||||| ||||||||||||||||| ||| |||||||||||||| |||||| ||||||||||| |||      
T  15379776 gtcttccgagattctatccccagcaagttgcatagctacctgccctcagccatggtcccgatacgtctcccaacgacgttatatccaaagaggatttcca 15379677  T
Q  143 ------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
          | |||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15379676 agaatgtgtgatatagcacgagccactacgtgcccaatattccaatgtcttgtctgtctctgc 15379614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 45 - 199
Target Start/End: Original strand, 14671717 - 14671879
Alignment:
Q  45 gtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc-- 142  Q
    ||||||| ||||||||||||||||||||||  |||||| ||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |||      
T  14671717 gtcttccgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttcca 14671816  T
Q  143 ------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
          | | || |||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  14671817 ggaatgtgtaatatagcacgagccattacgtgcccaatactccagtgtcttgtctgtctctgc 14671879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 31120069 - 31119894
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||| ||  |||||| ||||||||||| |||||||||  ||||||||||||| |||    
T  31120069 aacggcgttttccccggtcgggtcttccaagattctatccccagcaagatgcatagctacctgccctcagctatggttccgacacgtctcccaacgacgt 31119970  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  31119969 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 31119894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 26 - 198
Target Start/End: Original strand, 17019737 - 17019917
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||| ||||||||||||||||||||||  || ||| ||||||||||||||||||||| |||||||||||||| ||| |    
T  17019737 cggcattattcccagtagagtcttccgagattctatccccagcaagttgcataactacctgccctcagccatggttccgatacgtctcccaacgacgtca 17019836  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctg 198  Q
    ||||||||||||| |||        | | || |||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  17019837 tctccaaagaggatttccaggaatgtgtaatatagcacgagccactgcgtgcccaacactccagtgtcttgtctgtctctg 17019917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 20331994 - 20331819
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||||| || ||||||||| ||||||||||||||||||| |||||||||||  || ||| ||||||||||| |||||||||  ||||||||||||| |||    
T  20331994 aacggcattttccccagtcaggtcttccaagattctatctccagcaagttgcatatctacctgccctcagctatggttccgacacgtctcccaacgacgt 20331895  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  20331894 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 20331819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 21976410 - 21976585
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||| ||  |||||| ||||||||||| |||||||||  ||||||||||||| |||    
T  21976410 aacggcgttttccccggtcgggtcttccaagattctatccccagcaagatgcatagctacctgccctcagctatggttccgacacgtctcccaacgacgt 21976509  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || |||||||||||||||||||||||||||||  || ||||||||    
T  21976510 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatatcttgtct 21976585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 27156885 - 27156710
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||||| || ||||||||| ||||||||||||||||||| |||||||||||  || ||| ||||||||||| |||||||||  ||||||||||||| |||    
T  27156885 aacggcattttccccagtcaggtcttccaagattctatctccagcaagttgcatatctacctgccctcagctatggttccgacacgtctcccaacgacgt 27156786  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  27156785 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 27156710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 26 - 191
Target Start/End: Original strand, 6576544 - 6576718
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| ||||||||||| | ||||||| ||||||||||||||||||||||  ||  || ||||||||||||||||||||| |||||||||||||| ||| |    
T  6576544 cggcattatccccagtggagtcttccgagattctatccccagcaagttgcatacttacctgccctcagccatggttccgatacgtctcccaacgacgtca 6576643  T
Q  126 tctcc-aaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||| |||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  6576644 tctccaaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 6576718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 26 - 191
Target Start/End: Complemental strand, 14753073 - 14752900
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||| ||||||||||||||||||||||  || ||| ||||||||||||||||||||| |||||||||||||| ||| |    
T  14753073 cggcattattcccagtagagtcttccgagattctatccccagcaagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgtca 14752974  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||| ||||    
T  14752973 tctccaaagaggatttccaggaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtctcgtct 14752900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 30 - 191
Target Start/End: Original strand, 5012593 - 5012763
Alignment:
Q  30 gttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctc 129  Q
    |||||||||||||||||||  ||||||||||||||||||||||||  || ||| |||||||||||| ||||||||  ||||||||||||| ||| |||||    
T  5012593 gttatccccagtcgggtctctcaagattctatccccagcaagttgcatacctacctgccctcagccgtggttccgacacgtctcccaacgacgtcatctc 5012692  T
Q  130 caaagaggacttc--------tatgatgtagcacgagccactacgtg-cccaatactccaatgtcttgtct 191  Q
    ||||||||| |||        | | || ||||||||||||||||||| ||||| |||| ||||||||||||    
T  5012693 caaagaggatttccaagaatgtgtaatatagcacgagccactacgtgccccaacactctaatgtcttgtct 5012763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 45 - 191
Target Start/End: Original strand, 39857342 - 39857496
Alignment:
Q  45 gtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc-- 142  Q
    ||||||| ||||||||||||||||||||||  || ||| ||||||||||||||||||||| |||||||||||||| ||| ||||||| ||| || |||      
T  39857342 gtcttccgagattctatccccagcaagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccacagaagaattcca 39857441  T
Q  143 ------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
          | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  39857442 agaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 39857496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 26 - 191
Target Start/End: Complemental strand, 36323894 - 36323721
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||| ||||||||||||||||||||||  |  ||| ||||||||||||||||||||| |||||||||||||| ||| |    
T  36323894 cggcattattcccagtagagtcttccgagattctatccccagcaagttgcatgcctacctgccctcagccatggttccgatacgtctcccaacgacgtca 36323795  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||| ||||| |||        | | || |||||||||||||||||||||||||| || ||||||||||||    
T  36323794 tctccaaggaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatattctaatgtcttgtct 36323721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 26 - 191
Target Start/End: Complemental strand, 36338103 - 36337930
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||| ||||||||||||||||||||||  |  ||| ||||||||||||||||||||| |||||||||||||| ||| |    
T  36338103 cggcattattcccagtagagtcttccgagattctatccccagcaagttgcatgcctacctgccctcagccatggttccgatacgtctcccaacgacgtca 36338004  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||| ||||| |||        | | || |||||||||||||||||||||||||| || ||||||||||||    
T  36338003 tctccaaggaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatattctaatgtcttgtct 36337930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 40099192 - 40099017
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| |||||||| | | ||  |||||||||||| |||||||||||  || ||| ||||||||||| |||||||||  ||||||||||||| |||    
T  40099192 aacggcgttttccccagtggagcctctcaagattctatctccagcaagttgcatatctacctgccctcagctatggttccgacacgtctcccaacgacgt 40099093  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  40099092 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 40099017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 45 - 191
Target Start/End: Original strand, 5701256 - 5701410
Alignment:
Q  45 gtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc-- 142  Q
    |||||||||||||||||| |||||||||||  || ||| |||||||||||| |||||| | |||||||||||||| ||| |||||||||||||| |||      
T  5701256 gtcttccaagattctatctccagcaagttgcatacctacctgccctcagccttggttctgatacgtctcccaacgacgtcatctccaaagaggatttcca 5701355  T
Q  143 ------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
          | | || |||||||||||||||||||||||||||||  |||||||||||    
T  5701356 agaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 5701410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 51 - 191
Target Start/End: Complemental strand, 18794175 - 18794027
Alignment:
Q  51 caagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc-------- 142  Q
    ||||| |||||||||||||||||   || ||| | |||||| |||||||||||| |||||||||||||| ||| |||||||||||||| |||            
T  18794175 caagactctatccccagcaagttacatacctaccggccctcggccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatg 18794076  T
Q  143 tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  18794075 tgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 18794027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 24 - 138
Target Start/End: Complemental strand, 33667360 - 33667246
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||   |||||||||||||||||| |||||||||||  || ||  |||||||||||| ||| |||| |||||||||||||| |||    
T  33667360 aacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgcatacctgcctgccctcagccttggctccgatacgtctcccaacgacgt 33667261  T
Q  124 tatctccaaagagga 138  Q
     ||||||||||||||    
T  33667260 catctccaaagagga 33667246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 25 - 191
Target Start/End: Complemental strand, 34182515 - 34182341
Alignment:
Q  25 acggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtt 124  Q
    ||||| |||| |||||| | |||| |||||| ||||||||||||||||||  |||||| | ||||||||||  ||| |||  ||||||||||||| |||     
T  34182515 acggcattattcccagtagagtctcccaagactctatccccagcaagttgcatagctaccggccctcagcctaggtcccgacacgtctcccaacgacgtc 34182416  T
Q  125 atctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    |||||||||||||| |||        | | || ||||||||||||||| ||||||||||||| ||||||||||||    
T  34182415 atctccaaagaggatttccaagaatgtgtaatatagcacgagccactatgtgcccaatactctaatgtcttgtct 34182341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 14105250 - 14105425
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| |||||||| | ||||  ||||| |||||||||||||||||   || ||| |  ||||| |||||||||||| |||||||||||||| |||    
T  14105250 aacggcgttttccccagtggagtctctcaagactctatccccagcaagttacatacctaccgaccctcggccatggttccgatacgtctcccaacgacgt 14105349  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     ||||||| ||||||  ||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  14105350 catctccatagaggatctccgagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 14105425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 26 - 191
Target Start/End: Original strand, 24119349 - 24119523
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||| ||||||||||||||||||||||  || |||   |||||||||| |||| ||| ||||||||||||||  || |    
T  24119349 cggcattattcccagtagagtcttccgagattctatccccagcaagttgcatatctactggccctcagccttggtcccgatacgtctcccaacgatgtca 24119448  T
Q  126 tctccaaagaggact---------tctatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||| |         | | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  24119449 tctccaaagaggattttccgagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 24119523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 138
Target Start/End: Original strand, 30760470 - 30760584
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||   |||||||||||||||||| |||||||||||  || ||  |||||||||||| ||| |||| |||||||||||||| |||    
T  30760470 aacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgcatacctgcctgccctcagccttggctccgatacgtctcccaacgacgt 30760569  T
Q  124 tatctccaaagagga 138  Q
     ||||||||| ||||    
T  30760570 catctccaaaaagga 30760584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 24814726 - 24814685
Alignment:
Q  150 tagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  24814726 tagcacgagccactacgtgcccaatactctaatgtcttgtct 24814685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 24813822 - 24813781
Alignment:
Q  150 tagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||| ||||||||||||||| ||||||||||||    
T  24813822 tagcacgagccaccacgtgcccaatactctaatgtcttgtct 24813781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 1e-43; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 25 - 195
Target Start/End: Original strand, 19701055 - 19701233
Alignment:
Q  25 acggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtt 124  Q
    ||||| ||||||||||| | ||||||| ||||||||||||||||||||||  |||||| |||||||||| |||||||||| |||||||||||| ||||||    
T  19701055 acggcattatccccagtagagtcttccgagattctatccccagcaagttgtatagctacctgccctcagtcatggttccgatacgtctcccaatggcgtt 19701154  T
Q  125 atctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtct 195  Q
    ||||||||||| || |||        | | || ||||||||||||||||||||||||||||||||||||||||||||||    
T  19701155 atctccaaagaagatttccaggaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtct 19701233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 26 - 199
Target Start/End: Original strand, 4728265 - 4728446
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | |||| |||||||||||||||||||||||||  |||||| |||||||||||||||||||||  ||||||||||||| ||| |    
T  4728265 cggcattattcccagtagagtctcccaagattctatccccagcaagttgcatagctacctgccctcagccatggttccgacacgtctcccaacgacgtca 4728364  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||||||| |||        | | || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4728365 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 4728446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 26 - 199
Target Start/End: Original strand, 5658773 - 5658954
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | |||| || ||||||||||||||||||||||  |||||| ||||||||||||||||||||| |||||||||||||| ||| |    
T  5658773 cggcattattcccagtagagtctcccgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtca 5658872  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||||||| |||        | | || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5658873 tctccaaagaggatttccaggaaggtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 5658954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 26 - 199
Target Start/End: Original strand, 6208534 - 6208715
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | |||| |||||||||||||||||||||||||  |||||| |||||||||||||||||||||  ||||||||||||| ||| |    
T  6208534 cggcattattcccagtagagtctcccaagattctatccccagcaagttgcatagctacctgccctcagccatggttccgacacgtctcccaacgacgtca 6208633  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||||||| |||        | | || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6208634 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 6208715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 28109564 - 28109388
Alignment:
Q  24 aacggcgttatccccagtc-gggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcg 122  Q
    ||||||||| ||||||||| |||| ||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||| ||    
T  28109564 aacggcgttttccccagtcagggttttccaagattctatctccagcaagttgtttagctacctgccctcagccatggttccgatacgtctcccaacgacg 28109465  T
Q  123 ttatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    | |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  28109464 tcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 28109388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 24334835 - 24335010
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||| ||  |||||| ||||||||||||||||||||| |||||||||||||| |||    
T  24334835 aacggcgttttccccagtggggtcttccaagattctatccccagcaagatgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgt 24334934  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     ||| |||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  24334935 catccccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 24335010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 25 - 199
Target Start/End: Complemental strand, 15886339 - 15886157
Alignment:
Q  25 acggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtt 124  Q
    ||||| |||| |||||| | ||||||| ||||||||||||||||||| ||  |||||| ||||||||||||||||||||| |||||||||||||| ||||    
T  15886339 acggcattattcccagtagagtcttccgagattctatccccagcaagatgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtt 15886240  T
Q  125 atctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||||||||||| |||        | | || |||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  15886239 atctccaaagaggatttccaggaatgtgtaatatagcacgagccattacgtgcccaatactccagtgtcttgtctgtctctgc 15886157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 26 - 199
Target Start/End: Original strand, 18057907 - 18058088
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | |||| || ||||||||||||||||||||||  |||||| ||||||||||||||||| ||| |||||||||||||| ||| |    
T  18057907 cggcattattcccagtagagtctcccgagattctatccccagcaagttgcatagctacctgccctcagccatggtcccgatacgtctcccaacgacgtca 18058006  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||||||| |||        | | || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18058007 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 18058088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 26 - 199
Target Start/End: Complemental strand, 22381201 - 22381020
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | |||| || ||||||||||||||||||||||  |||||| |||||||||||||||||||||  ||||||||||||| ||| |    
T  22381201 cggcattattcccagtagagtctcccgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgacacgtctcccaacgacgtca 22381102  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||||||| |||        ||| || |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22381101 tctccaaagaggatttccaggaaagtataatatagcacgagccactacgtgcccaatactccaatgtcctgtctgtctctgc 22381020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 26 - 199
Target Start/End: Complemental strand, 29142375 - 29142194
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | |||| || ||||||||||||||||||||||  |||||| ||||||||||||||||||||| |||||||||||||| ||| |    
T  29142375 cggcattattcccagtagagtctcccgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtca 29142276  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||| ||||||| |||        | | || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29142275 tctccgaagaggatttccaggaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 29142194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 31 - 199
Target Start/End: Original strand, 18337268 - 18337444
Alignment:
Q  31 ttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctcc 130  Q
    |||| |||||| | |||| |||||||||||||||||||||||||  |||||| ||||||||||||| |||||||  ||||||||||||| ||| ||||||    
T  18337268 ttattcccagtagagtctcccaagattctatccccagcaagttgcgtagctacctgccctcagccagggttccgacacgtctcccaacgacgtcatctcc 18337367  T
Q  131 aaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||||| |||        ||| || |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  18337368 aaagaggatttccaggaaagtataatatagcacgagccactacgtgcccaatactccaatgtcctgtctgtctctgc 18337444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 25 - 198
Target Start/End: Original strand, 15367903 - 15368085
Alignment:
Q  25 acggcgttatccccagtcgggtcttccaagattctatccccagcaagttgatta-gctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||| ||||||||||  | ||||||| ||||||||||||||||||||||  || |||| | ||||||| ||||||||||| |||||||||||| | |||    
T  15367903 acggcattatccccagcagagtcttccgagattctatccccagcaagttgcatatgctacccgccctcaaccatggttccgatacgtctcccaatgacgt 15368002  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctg 198  Q
    ||||||||||||||| |||        | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15368003 tatctccaaagaggatttccaagaatgtgtgatgtagcgcgagccactacgtgcccaatactccaatgtcttgtctgtctctg 15368085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 25 - 199
Target Start/End: Original strand, 16422845 - 16423027
Alignment:
Q  25 acggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtt 124  Q
    ||||| ||||||||||| | ||||||| ||||||||||||| ||||||||  || ||| ||||||||||||||||||||| |||||||||||||| ||||    
T  16422845 acggcattatccccagtagagtcttccgagattctatcccctgcaagttgcataactacctgccctcagccatggttccgatacgtctcccaacgacgtt 16422944  T
Q  125 atctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||||||||||| |||        | | || |||||||||||||||||| |||||||||||| || |||||||||||||||    
T  16422945 atctccaaagaggatttccaggaatgtgtaatatagcacgagccactacgtacccaatactccagtgccttgtctgtctctgc 16423027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 18231851 - 18232026
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||| ||  |||||| ||||||||||| |||||||||  ||||||||||||| |||    
T  18231851 aacggcgttttccccggtcgggtcttccaagattctatccccagcaagatgcatagctacctgccctcagctatggttccgacacgtctcccaacgacgt 18231950  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  18231951 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 18232026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 26 - 199
Target Start/End: Complemental strand, 4790252 - 4790071
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | |||| ||||||||||||||  |||||||||  |||||| ||||||||||||||||||||| |||||||||||||| ||| |    
T  4790252 cggcattattcccagtagagtctcccaagattctatccttagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtca 4790153  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||| ||||||| |||        | | || |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4790152 tctccgaagaggatttccaggaatgtgtaatatagcacgagccattacgtgcccaatactccaatgtcttgtctgtctctgc 4790071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 26 - 191
Target Start/End: Complemental strand, 11103982 - 11103809
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||| ||||||||||||||||||||||  || ||| ||||||||||||||||||||| |||||||||||||| ||| |    
T  11103982 cggcattattcccagtagagtcttccgagattctatccccagcaagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgtca 11103883  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  11103882 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 11103809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 31 - 199
Target Start/End: Complemental strand, 16618084 - 16617907
Alignment:
Q  31 ttatccccagtcgggtcttccaagattctatccccagcaagttgatta-gctatctgccctcagccatggttccggtacgtctcccaacggcgttatctc 129  Q
    ||||||||||  | ||||||| ||||||||||||||||||||||  || |||| | ||||||||||||||||||| | |||||||||||| || ||||||    
T  16618084 ttatccccagcggagtcttccgagattctatccccagcaagttgcatatgctacccgccctcagccatggttccgatgcgtctcccaacgacgatatctc 16617985  T
Q  130 caaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||| |||        | |||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16617984 caaagaggatttccaagaatgtgtgatatagcacgagctactacgtgcccaatactccaatgtcttgtctgtctctgc 16617907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 24 - 189
Target Start/End: Complemental strand, 17978551 - 17978378
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||| ||  |||||| ||||||||||| |||||||||  ||||||||||||| |||    
T  17978551 aacggcgttttccccggtcgggtcttccaagattctatccccagcaagatgcatagctacctgccctcagctatggttccgacacgtctcccaacgacgt 17978452  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgt 189  Q
     |||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||    
T  17978451 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgt 17978378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 26 - 199
Target Start/End: Original strand, 35887399 - 35887580
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | |||| |||||| ||||||||||||||||||  |||||| |||||||||||||||||||||  ||||||||||||| ||| |    
T  35887399 cggcattattcccagtagagtctcccaagactctatccccagcaagttgcatagctacctgccctcagccatggttccgacacgtctcccaacgacgtca 35887498  T
Q  126 tctccaaagaggact--------tctatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||||||| |        | | | || |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  35887499 tctccaaagaggattttcaggaatgtgtaatatagcacgagccactacgtgcccaatacttcaatgtcttgtctgtctctgc 35887580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 31 - 199
Target Start/End: Complemental strand, 8283076 - 8282900
Alignment:
Q  31 ttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctcc 130  Q
    |||| |||||| | ||||||| ||||||||||||||||||||||  |||||| ||||||||||||||||| ||| |||||||||||||| ||| ||||||    
T  8283076 ttatacccagtagagtcttccgagattctatccccagcaagttgcatagctacctgccctcagccatggtcccgatacgtctcccaacgacgtcatctcc 8282977  T
Q  131 aaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||||| |||        | | || |||||||||||||| ||||||||| |||||| ||||||||||||||||||    
T  8282976 aaagaggatttccaggaatgtgtaatatagcacgagccactgcgtgcccaacactccagtgtcttgtctgtctctgc 8282900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 53 - 197
Target Start/End: Complemental strand, 15734710 - 15734558
Alignment:
Q  53 agattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc--------ta 144  Q
    ||||||||||||||||||||||  |||||| ||||||||| ||||||| ||| |||||||||||||| ||| |||||||||||||| |||        |     
T  15734710 agattctatccccagcaagttgcatagctacctgccctcaaccatggtcccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtg 15734611  T
Q  145 tgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctct 197  Q
    | || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15734610 taatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctct 15734558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 45 - 199
Target Start/End: Original strand, 22041087 - 22041250
Alignment:
Q  45 gtcttccaagattctatccccagcaagttgatta-gctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc- 142  Q
    ||||||| ||||||||||||||||||||||  || |||| | ||||||||||||||||||| | |||||||||||| || ||||||||||||||| |||     
T  22041087 gtcttccgagattctatccccagcaagttgcatatgctacccgccctcagccatggttccgatgcgtctcccaacgacgatatctccaaagaggatttcc 22041186  T
Q  143 -------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
           | |||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22041187 aagaatgtgtgatatagcacgagctactacgtgcccaatactccaatgtcttgtctgtctctgc 22041250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 25 - 199
Target Start/End: Original strand, 4690313 - 4690495
Alignment:
Q  25 acggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtt 124  Q
    ||||| |||| |||||| | |||| || ||||||||||||||||||||||  |||||| ||||||||||||||||| ||| |||||||||||||| |||     
T  4690313 acggcattattcccagtagagtctcccgagattctatccccagcaagttgcatagctacctgccctcagccatggtcccgatacgtctcccaacgacgtc 4690412  T
Q  125 atctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||||||||||| |||        | | || |||||||||||||| ||||||||| |||||| ||||||||||||||||||    
T  4690413 atctccaaagaggatttccaagaatgtgtaatatagcacgagccactgcgtgcccaacactccagtgtcttgtctgtctctgc 4690495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 191
Target Start/End: Complemental strand, 31029864 - 31029691
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||| ||||||||||||||||||||||  |||||| |||||||||||| |||||||| |||||||||||||| ||| |    
T  31029864 cggcattattcccagtagagtcttccgagattctatccccagcaagttgcatagctacctgccctcagccgtggttccgatacgtctcccaacgacgtca 31029765  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  31029764 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 31029691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 24 - 188
Target Start/End: Original strand, 5717714 - 5717886
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||||| || ||||||||| ||||||||||||||||||| |||||||||||  || ||| ||||||||||| |||||||||  ||||||||||||| |||    
T  5717714 aacggcattttccccagtcaggtcttccaagattctatctccagcaagttgcatatctacctgccctcagctatggttccgacacgtctcccaacgacgt 5717813  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttg 188  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| |||||||||    
T  5717814 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttg 5717886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 24 - 188
Target Start/End: Original strand, 5728624 - 5728796
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||||| || ||||||||| ||||||||||||||||||| |||||||||||  || ||| ||||||||||| |||||||||  ||||||||||||| |||    
T  5728624 aacggcattttccccagtcaggtcttccaagattctatctccagcaagttgcatatctacctgccctcagctatggttccgacacgtctcccaacgacgt 5728723  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttg 188  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| |||||||||    
T  5728724 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttg 5728796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 24 - 188
Target Start/End: Complemental strand, 5763744 - 5763572
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||||| || ||||||||| ||||||||||||||||||| |||||||||||  || ||| ||||||||||| |||||||||  ||||||||||||| |||    
T  5763744 aacggcattttccccagtcaggtcttccaagattctatctccagcaagttgcatatctacctgccctcagctatggttccgacacgtctcccaacgacgt 5763645  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttg 188  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| |||||||||    
T  5763644 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttg 5763572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 5020370 - 5020545
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||   ||||  ||||||||||||||||||||||||  || ||| ||||||||||| ||||||||| |||||||||||||| |||    
T  5020370 aacggcgttttccccagtaaagtctctcaagattctatccccagcaagttgcatatctacctgccctcagctatggttccgatacgtctcccaacgacgt 5020469  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  5020470 catctccaaagaggatttccgagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 5020545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 6536343 - 6536168
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||   |||||||||||||||||| |||||||||||  |||||| ||||||||||||||||||||| |||||||||||||| |||    
T  6536343 aacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgt 6536244  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||| ||||||||| |||        | | || |||||||||||||||||||||||||| ||  |||||||||||    
T  6536243 catcttcaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatattctgatgtcttgtct 6536168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 10649730 - 10649904
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||  | |||||||||||||||||||||||||||||  || ||| |||||||||||||||||||||  ||||||||||||| |||    
T  10649730 aacggcgttttccccagtaag-tcttccaagattctatccccagcaagttgcatacctacctgccctcagccatggttccgaaacgtctcccaacgacgt 10649828  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  10649829 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 10649904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 29658567 - 29658392
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||||| || ||||||||| ||||||||||||||||||| |||||||||||  || ||| ||||||||||| ||||||||   ||||||||||||| |||    
T  29658567 aacggcattttccccagtcaggtcttccaagattctatctccagcaagttgcatatctacctgccctcagctatggttccaacacgtctcccaacgacgt 29658468  T
Q  124 tatctccaaagaggacttctatg-atg-------tagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| ||| | | |||       ||||||||||||||||||||||||||||| ||||||||||||    
T  29658467 catctccaaagaggatttccaagaatgtgtaacatagcacgagccactacgtgcccaatactctaatgtcttgtct 29658392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 26 - 191
Target Start/End: Complemental strand, 4340297 - 4340124
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| ||||||||||| | |||| |||||||||||||||||||||||||  || ||| |||||||||||| ||| |||| |||||||||||||| ||| |    
T  4340297 cggcattatccccagtagagtctcccaagattctatccccagcaagttgcatacctacctgccctcagccttggctccgatacgtctcccaacgacgtca 4340198  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  4340197 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 4340124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 26 - 191
Target Start/End: Original strand, 5473628 - 5473801
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||| |||||||||||||||| |||||  || ||| ||||||||||||||||||||| |||||||||||||| ||| |    
T  5473628 cggcattattcccagtagagtcttccgagattctatccccagcgagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgtca 5473727  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  5473728 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 5473801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 26 - 191
Target Start/End: Complemental strand, 18285977 - 18285804
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||| ||||||||||||||||||||||  || ||| ||||||||||||||||||||| |||||||||||||| ||| |    
T  18285977 cggcattattcccagtagagtcttccgagattctatccccagcaagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgtca 18285878  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||| ||||    
T  18285877 tctccaaagaggatttccaggaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtctcgtct 18285804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 26 - 191
Target Start/End: Complemental strand, 18301278 - 18301105
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||| ||||||||||||||||||||||  || ||| ||||||||||||||||||||| |||||||||||||| ||| |    
T  18301278 cggcattattcccagtagagtcttccgagattctatccccagcaagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgtca 18301179  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||| ||||    
T  18301178 tctccaaagaggatttccaggaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtctcgtct 18301105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 26 - 191
Target Start/End: Original strand, 32445791 - 32445964
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | |||| |||||||||||||||||||||||||  |||||| |||||||||||||||||||||  ||||||||||||| ||| |    
T  32445791 cggcattattcccagtagagtctcccaagattctatccccagcaagttgcatagctacctgccctcagccatggttccgacacgtctcccaacgacgtca 32445890  T
Q  126 tctccaaagaggacttctatg-atg-------tagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    || |||||||||| ||| | | |||       |||||||||||||||||||||||||||||  |||||||||||    
T  32445891 tcaccaaagaggatttccaagaatgtgtaacatagcacgagccactacgtgcccaatactctgatgtcttgtct 32445964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 5589956 - 5589781
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||||| || ||||||||| ||||||||||||||||||| | |||||||||  || ||| ||||||||||| |||||||||  ||||||||||||| |||    
T  5589956 aacggcattttccccagtcaggtcttccaagattctatctctagcaagttgcatacctacctgccctcagctatggttccgacacgtctcccaacgacgt 5589857  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||| ||||||||||||||||||| ||||||||||||    
T  5589856 catctccaaagaggatttccaagaatgtgtaatatagcacgagtcactacgtgcccaatactctaatgtcttgtct 5589781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 22864464 - 22864289
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||   |||| |||||||||||||||||||||||||  || ||| ||||||||||||||||||||| |||||||||||||| |||    
T  22864464 aacggcgttttccccagtaaagtctcccaagattctatccccagcaagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgt 22864365  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||| ||||||||| |||        | | || |||||||||||||||||||||||||||||  | |||||||||    
T  22864364 catcttcaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgacgtcttgtct 22864289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 22879523 - 22879348
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||   |||| |||||||||||||||||||||||||  || ||| ||||||||||||||||||||| |||||||||||||| |||    
T  22879523 aacggcgttttccccagtaaagtctcccaagattctatccccagcaagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgt 22879424  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||| ||||||||| |||        | | || |||||||||||||||||||||||||||||  | |||||||||    
T  22879423 catcttcaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgacgtcttgtct 22879348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 26 - 191
Target Start/End: Original strand, 4423557 - 4423730
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||||||||||   ||||  ||||||||||||||||||||||||  || ||| ||||||||||||||||||||  |||||||||||||| ||| |    
T  4423557 cggcattatccccagtaaagtctctcaagattctatccccagcaagttgcatacctacctgccctcagccatggttccaatacgtctcccaacgacgtca 4423656  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  4423657 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 4423730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 26 - 191
Target Start/End: Original strand, 4630420 - 4630593
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||| ||||||||||||||||||||||  ||||||  ||||||||||||||||||||  ||||||||||||| ||| |    
T  4630420 cggcattattcccagtagagtcttccgagattctatccccagcaagttgcatagctacatgccctcagccatggttccgacacgtctcccaacgacgtca 4630519  T
Q  126 tctccaaagaggacttctatg-atg-------tagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    || |||||||||| ||| | | |||       |||||||||||||||||||||||||||||  |||||||||||    
T  4630520 tcaccaaagaggatttccaagaatgtgtaacatagcacgagccactacgtgcccaatactctgatgtcttgtct 4630593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 17970481 - 17970305
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatcccca-gcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcg 122  Q
    ||||||||| ||||| || | ||||  |||||||||||||||| |||||||| |||| || ||||||||||||||||||||  || ||||||||||| ||    
T  17970481 aacggcgttttccccggtggagtctctcaagattctatccccaagcaagttgtttagttacctgccctcagccatggttccaatatgtctcccaacgacg 17970382  T
Q  123 ttatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    | |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  17970381 tcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 17970305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 47030114 - 47030290
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaa-gttgattagctatctgccctcagccatggttccggtacgtctcccaacggcg 122  Q
    ||||||||| |||||||| | |||||||||||||||||| ||||||| ||||  |||||| ||||||||||||||||||||| | |||||||||||| ||    
T  47030114 aacggcgttttccccagtggagtcttccaagattctatctccagcaaagttgcatagctacctgccctcagccatggttccgatgcgtctcccaacgacg 47030213  T
Q  123 ttatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    | |||| ||||||||| |||        | | || |||||||||||||||||||||||||| ||  |||||||||||    
T  47030214 tcatcttcaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatattctgatgtcttgtct 47030290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 28345830 - 28346005
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| |||||||| | | ||  |||||||||||| |||||||||||  || ||| ||||||||||| |||||||||  ||||||||||||| |||    
T  28345830 aacggcgttttccccagtggagcctctcaagattctatctccagcaagttgcatatctacctgccctcagctatggttccgacacgtctcccaacgacgt 28345929  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  28345930 catctccaaagaggatttccaagaaggtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 28346005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 32297290 - 32297465
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||||| || ||||||||| ||||||||||||||||||| ||||| |||||  || ||| | |||||| |||||||||||| |||||||||||||| |||    
T  32297290 aacggcattttccccagtcaggtcttccaagattctatctccagcgagttgcatacctaccggccctcggccatggttccgatacgtctcccaacgacgt 32297389  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     ||||||| ||||||  ||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  32297390 catctccatagaggatctccgagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 32297465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 5602913 - 5602738
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| |||||||| | | ||  |||||||||||| |||||||||||  || ||| ||||||||||| |||||||||  ||||||||||||| |||    
T  5602913 aacggcgttttccccagtggagcctctcaagattctatctccagcaagttgcatatctacctgccctcagctatggttccgacacgtctcccaacgacgt 5602814  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  5602813 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 5602738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 20570456 - 20570281
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| |||||||| | ||||  |||||||||||||||||||||||   || ||| | | |||| |||||||||||| |||||||||||||| |||    
T  20570456 aacggcgttttccccagtggagtctctcaagattctatccccagcaagttacatacctaccggtcctcggccatggttccgatacgtctcccaacgacgt 20570357  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     ||||||| |||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  20570356 catctccatagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 20570281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 2 - 191
Target Start/End: Complemental strand, 16404414 - 16404217
Alignment:
Q  2 ccagcaatgagatggacatcataacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggtt 101  Q
    |||||| |||||||  || || ||||||||| ||||| ||  |||||  ||||||||||||||||||||||||  || ||| |||||||||||| ||| |    
T  16404414 ccagcactgagatgcccagcacaacggcgttttccccggtgaggtctctcaagattctatccccagcaagttgcatacctacctgccctcagccttggct 16404315  T
Q  102 ccggtacgtctcccaacggcgttatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||| |||||| ||||||| ||| ||||||| |||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  16404314 ccgatacgtcccccaacgacgtcatctccatagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 16404217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 24 - 138
Target Start/End: Original strand, 51788681 - 51788795
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||   |||||||||||||||||| |||||||||||  || ||  |||||||||||| ||| |||| |||||||||||||| |||    
T  51788681 aacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgcatacctgcctgccctcagccttggctccgatacgtctcccaacgacgt 51788780  T
Q  124 tatctccaaagagga 138  Q
     ||||||||||||||    
T  51788781 catctccaaagagga 51788795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 7079867 - 7079968
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||| ||||||||||||||||||||||  |||||| |||||||||||| ||||||||  ||||||||||||| |||||    
T  7079867 cggcattattcccagtagagtcttccgagattctatccccagcaagttgcatagctacctgccctcagccttggttccgacacgtctcccaacgacgtta 7079966  T
Q  126 tc 127  Q
    ||    
T  7079967 tc 7079968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 45 - 191
Target Start/End: Original strand, 20072693 - 20072847
Alignment:
Q  45 gtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc-- 142  Q
    |||| |||||||||||||||||||||||||  |||||| | ||||||||||  ||| |||  ||||||||||||| ||| |||||||||||||| |||      
T  20072693 gtctcccaagattctatccccagcaagttgcatagctaccggccctcagcctaggtcccgaaacgtctcccaacgacgtcatctccaaagaggatttcca 20072792  T
Q  143 ------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
          | | || |||||||||||||||||||||||||||||  |||||||||||    
T  20072793 agaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 20072847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 45 - 191
Target Start/End: Original strand, 48472590 - 48472744
Alignment:
Q  45 gtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc-- 142  Q
    |||| |||||||||||||||||||||||||  |||||| | ||||||||||  ||| |||  ||||||||||||| ||| |||||||||||||| |||      
T  48472590 gtctcccaagattctatccccagcaagttgcatagctaccggccctcagcctaggtcccgaaacgtctcccaacgacgtcatctccaaagaggatttcca 48472689  T
Q  143 ------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
          | | || |||||||||||||||||||||||||||||  |||||||||||    
T  48472690 agaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 48472744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 51 - 191
Target Start/End: Complemental strand, 31958029 - 31957881
Alignment:
Q  51 caagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc-------- 142  Q
    |||||||||||| |||||||||||  || ||| ||||||||||| |||||||||  ||||||||||||  ||| |||||||||||||| |||            
T  31958029 caagattctatctccagcaagttgcatatctacctgccctcagctatggttccgacacgtctcccaacaacgtcatctccaaagaggatttccaagaatg 31957930  T
Q  143 tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    | | || |||||||||||||||||||||||||||||  |||||||||||    
T  31957929 tgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 31957881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 18249377 - 18249552
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||| || | ||||  ||||| |||||||||||||||||   || ||| | |||||| |||||||||||| |||||| ||||||| |||    
T  18249377 aacggcgttttccccggtggagtctctcaagactctatccccagcaagttacatacctaccggccctcggccatggttccgatacgtcccccaacgacgt 18249476  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     ||||||| |||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  18249477 catctccatagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 18249552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 10402811 - 10402986
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||| || ||||||  ||||| |||||||||||||||||   || ||| | |||| | |||||||||||| |||||||||||||| |||    
T  10402811 aacggcgttttccccggtggggtctctcaagactctatccccagcaagttacatacctaccggcccccggccatggttccgatacgtctcccaacgacgt 10402910  T
Q  124 tatctccaaagagga-cttctatgatg-------tagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     ||||||| |||||| || | |  |||       ||||||||||||||||||||||||||||| ||||||||||||    
T  10402911 catctccatagaggatctccgagaatgtgtaacatagcacgagccactacgtgcccaatactctaatgtcttgtct 10402986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 51 - 191
Target Start/End: Original strand, 21681406 - 21681554
Alignment:
Q  51 caagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc-------- 142  Q
    ||||| |||||||||||||||||   || ||| | |||||| |||||||||||| |||||||||||||| ||| ||||||| ||||||  ||            
T  21681406 caagactctatccccagcaagttacatacctaccggccctcggccatggttccgatacgtctcccaacgacgtcatctccatagaggatctccgagaatg 21681505  T
Q  143 tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  21681506 tgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 21681554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 28027930 - 28028105
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||   ||||  ||||||||||||||||||||||||  || ||| | ||||||||||  ||| |||  ||||||||||||| |||    
T  28027930 aacggcgttttccccagtaaagtctctcaagattctatccccagcaagttgcatacctaccggccctcagcctaggtcccgacacgtctcccaacgacgt 28028029  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||| ||||||| |||        | | ||||||||||||||||||| |||||| ||||| ||||||||||||    
T  28028030 catctccgaagaggatttccaagaatgtgtaatgtagcacgagccactacttgcccattactctaatgtcttgtct 28028105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 138
Target Start/End: Original strand, 8218284 - 8218398
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| |||||||| | ||||  ||||| |||||| ||||||||||   || ||| | |||||| |||||||||||| |||||||||||||| |||    
T  8218284 aacggcgttttccccagtggagtctctcaagactctatctccagcaagttacatacctaccggccctcggccatggttccgatacgtctcccaacgacgt 8218383  T
Q  124 tatctccaaagagga 138  Q
     ||||||| ||||||    
T  8218384 catctccatagagga 8218398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 7080022 - 7080063
Alignment:
Q  150 tagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  7080022 tagcacgagccactacgtgcccaatactctaatgtcttgtct 7080063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 16599406 - 16599447
Alignment:
Q  150 tagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  16599406 tagcacgagccactacgtgcccaatactctaatgtcttgtct 16599447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 4e-43; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 26 - 199
Target Start/End: Complemental strand, 2130804 - 2130623
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||| ||||||||||||||||||||||  |||||||||||||||||||||||| ||| |||||||||||||| ||| |    
T  2130804 cggcattattcccagtagagtcttccgagattctatccccagcaagttgcatagctatctgccctcagccatggtcccgatacgtctcccaacgacgtca 2130705  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||||||| |||        | | || ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2130704 tctccaaagaggatttccaggaatgtgtaatatagcacgagccactacgtgcccaatactccagtgtcttgtctgtctctgc 2130623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 26 - 199
Target Start/End: Original strand, 15774250 - 15774431
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||| ||||||||||||||||||||||  || ||| ||||||||||||||||| ||| |||||||||||||| ||| |    
T  15774250 cggcattattcccagtagagtcttccgagattctatccccagcaagttgcatacctacctgccctcagccatggtcccgatacgtctcccaacgacgtca 15774349  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||||||| |||        | | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15774350 tctccaaagaggatttccaggaatgtgtaatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 15774431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 29836023 - 29836198
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||  || ||| ||||||||||||||||||||| |||||||||||||| |||    
T  29836023 aacggcgttttccccagtcgggtcttccaagattctatctccagcaagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgt 29836122  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  29836123 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 29836198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 45 - 199
Target Start/End: Complemental strand, 22074429 - 22074267
Alignment:
Q  45 gtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc-- 142  Q
    ||||||| ||||||||||||||||||||||  |||||| ||||||||||||||||| ||| |||||||||||||| |||||| ||||||||||| |||      
T  22074429 gtcttccgagattctatccccagcaagttgcatagctacctgccctcagccatggtcccgatacgtctcccaacgacgttatatccaaagaggatttcca 22074330  T
Q  143 ------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
          | |||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22074329 agaatgtgtgatatagcacgagccactacgtgcccaatattccaatgtcttgtctgtctctgc 22074267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 31 - 199
Target Start/End: Original strand, 22139595 - 22139771
Alignment:
Q  31 ttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctcc 130  Q
    ||||||||||| | ||||||| ||||||| ||||||||||||||  |||||| |||||||||| |||||||||| || ||||||||||| ||||||||||    
T  22139595 ttatccccagtagagtcttccgagattctgtccccagcaagttgtatagctacctgccctcagtcatggttccgataagtctcccaacgacgttatctcc 22139694  T
Q  131 aaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||||| |||        | | || ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22139695 aaagaggatttccaggaatgtgtaatatagcacgagccactacgtgcccaatactccagtgtcttgtctgtctctgc 22139771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 45 - 199
Target Start/End: Original strand, 18797404 - 18797566
Alignment:
Q  45 gtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc-- 142  Q
    |||| ||||||||||||||  |||||||||  |||||| ||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |||      
T  18797404 gtctcccaagattctatccttagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttcca 18797503  T
Q  143 ------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
          | | || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18797504 ggaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 18797566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 26 - 199
Target Start/End: Original strand, 33249039 - 33249220
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||||||||||||||||||||||||||  |||||| | |||||||||| |||| ||| |||||||||||||| ||| |    
T  33249039 cggcattattcccagtagagtcttccaagattctatccccagcaagttgcatagctaccggccctcagccttggtcccgatacgtctcccaacgacgtca 33249138  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||||||| |||        | | || |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33249139 tctccaaagaggatttccaggaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtttgtctctgc 33249220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 199
Target Start/End: Original strand, 14569836 - 14570012
Alignment:
Q  31 ttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctcc 130  Q
    |||| |||||| | ||||||| |||||||||||||||| |||||  |||||| ||||||||||||||||||||| |||||||||||||| ||| ||||||    
T  14569836 ttattcccagtagagtcttccgagattctatccccagcgagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctcc 14569935  T
Q  131 aaagaggacttctatga--------tgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||||| ||| | ||        | ||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  14569936 aaagaggatttccaagaatgtgtagtatagcacgagccactgtgtgcccaatactccaatgtcttgtctgtctctgc 14570012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 25 - 199
Target Start/End: Original strand, 16260613 - 16260795
Alignment:
Q  25 acggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtt 124  Q
    ||||| |||| |||||| | | ||||| ||||||||||||||||||||||  |||||| |||||||||| |||||||||| || ||||||||||| ||||    
T  16260613 acggcattattcccagtagagccttccgagattctatccccagcaagttgcatagctacctgccctcagtcatggttccgataagtctcccaacgacgtt 16260712  T
Q  125 atctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||||||||||| |||        | | || |||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  16260713 atctccaaagaggatttccaggaatgtgtaatatagcacgagccattacgtgcccaatactccagtgtcttgtctgtctctgc 16260795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 25 - 199
Target Start/End: Complemental strand, 19654863 - 19654681
Alignment:
Q  25 acggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtt 124  Q
    ||||| |||| |||||| | | ||||| ||||||||||||||||||||||  |||||| |||||||||| |||||||||| || ||||||||||| ||||    
T  19654863 acggcattattcccagtagagccttccgagattctatccccagcaagttgcatagctacctgccctcagtcatggttccgataagtctcccaacgacgtt 19654764  T
Q  125 atctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||||||||||| |||        | | || |||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  19654763 atctccaaagaggatttccaggaatgtgtaatatagcacgagccattacgtgcccaatactccagtgtcttgtctgtctctgc 19654681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 25 - 199
Target Start/End: Original strand, 19694791 - 19694973
Alignment:
Q  25 acggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtt 124  Q
    ||||| |||| |||||| | ||||||| ||||||||||||||||||||||  |||||| ||||||||||||||||||||| |||||||| ||||| |||     
T  19694791 acggcattattcccagtagagtcttccgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctctcaacgacgtc 19694890  T
Q  125 atctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||||||||||| |||        | | || || ||||||||| |||||||||||||||||| ||||||||||||||||||    
T  19694891 atctccaaagaggatttccaggaatgtgtaatataacacgagccattacgtgcccaatactccagtgtcttgtctgtctctgc 19694973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 31 - 199
Target Start/End: Complemental strand, 21341702 - 21341525
Alignment:
Q  31 ttatccccagtcgggtcttccaagattctatcccca-gcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctc 129  Q
    |||| |||||| | ||||||| ||||||||||| || ||||||||  |||||| |||||||||||||||||||||  ||||||||||||| ||| |||||    
T  21341702 ttattcccagtagagtcttccgagattctatcctcaagcaagttgcatagctacctgccctcagccatggttccgacacgtctcccaacgacgtcatctc 21341603  T
Q  130 caaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||| |||        | | || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21341602 caaagaggatttccaggaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 21341525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 28355474 - 28355299
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||||| || ||||||||| ||||||||||||||||||| |||||||||||  || ||| ||||||||||| |||||||||  ||||||||||||| |||    
T  28355474 aacggcattttccccagtcaggtcttccaagattctatctccagcaagttgcatatctacctgccctcagctatggttccgacacgtctcccaacgacgt 28355375  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  28355374 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 28355299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 45 - 191
Target Start/End: Original strand, 18716177 - 18716331
Alignment:
Q  45 gtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc-- 142  Q
    |||| |||||||||||||||||||||||||  |||||| |||||||||||||||||||||  ||||||||||||| ||| |||||||||||||| |||      
T  18716177 gtctcccaagattctatccccagcaagttgcatagctacctgccctcagccatggttccgacacgtctcccaacgacgtcatctccaaagaggatttcca 18716276  T
Q  143 ------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
          | | || |||||||||||||||||||||||||||||  |||||||||||    
T  18716277 agaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 18716331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 31483393 - 31483218
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||   |||||||||||||||||| ||||||| |||  || ||| ||||||||||| |||||||||  ||||||||||||| |||    
T  31483393 aacggcgttttccccagtaaagtcttccaagattctatctccagcaaattgcatatctacctgccctcagctatggttccgacacgtctcccaacgacgt 31483294  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  31483293 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 31483218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 33265420 - 33265595
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||   ||||  ||||||||||||||||||||||||  || ||| ||||||||||||||||||||  |||||||||||||| |||    
T  33265420 aacggcgttttccccagtaaagtctctcaagattctatccccagcaagttgcatacctacctgccctcagccatggttccaatacgtctcccaacgacgt 33265519  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     || ||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  33265520 catttccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 33265595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 21 - 191
Target Start/End: Complemental strand, 12086253 - 12086075
Alignment:
Q  21 cataacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacgg 120  Q
    |||||||||||| ||||||||   | ||||| |||||| ||  |||||||||||  |||||| ||||||||||||||||||||| ||||||||||||||     
T  12086253 cataacggcgttttccccagtaaagccttccgagattcaatttccagcaagttgtatagctacctgccctcagccatggttccgatacgtctcccaacga 12086154  T
Q  121 cgttatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||| |||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  12086153 cgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 12086075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 53 - 199
Target Start/End: Complemental strand, 19910676 - 19910522
Alignment:
Q  53 agattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc--------ta 144  Q
    ||||||||||| ||||||||||  |||||| ||||||||||||||||| ||| |||||||||||||| ||| |||||||||||||| |||        |     
T  19910676 agattctatcctcagcaagttgcatagctacctgccctcagccatggtcccgatacgtctcccaacgacgtcatctccaaagaggatttccaagaatgtg 19910577  T
Q  145 tgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    | || ||||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  19910576 taatatagcacgagccactgtgtgcccaatactccagtgtcttgtctgtctctgc 19910522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 26 - 199
Target Start/End: Complemental strand, 27602449 - 27602268
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | |||| ||||||||||||||  |||||||||  |||||| ||||||||||||||||||||| |||||||||||||| ||| |    
T  27602449 cggcattattcccagtagagtctcccaagattctatccttagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtca 27602350  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
     |||||||||||| |||        | | || |||||||||||||  ||||||||| |||||| ||||||||||||||||||    
T  27602349 gctccaaagaggatttccaagaatgtgtaatatagcacgagccaccgcgtgcccaacactccagtgtcttgtctgtctctgc 27602268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 31361267 - 31361404
Alignment:
Q  62 ccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc--------tatgatgtagc 153  Q
    |||||||||||||  || ||| ||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |||        | | || ||||    
T  31361267 ccccagcaagttgcatacctacctgccctcagccatggttccgatacgtctcccaacgacgtcatctccaaagaggatttccgagaatgtgtaatatagc 31361366  T
Q  154 acgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  31361367 acgagccactacgtgcccaatactctaatgtcttgtct 31361404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 19201906 - 19201730
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatcccca-gcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcg 122  Q
    ||||||||| ||||| || | ||||  |||||||||||||||| |||||||| |||| || |||||||||||  ||||||||  ||||||||||||| ||    
T  19201906 aacggcgttttccccggtggagtctctcaagattctatccccaagcaagttgtttagttacctgccctcagctgtggttccgacacgtctcccaacgacg 19201807  T
Q  123 ttatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    | |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  19201806 tcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 19201730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 24 - 138
Target Start/End: Original strand, 44567680 - 44567794
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||   |||||||||||||||||  |||||||||||  |||||| ||| |||||||||||||||||  ||||||||||||| |||    
T  44567680 aacggcgttttccccagtaaagtcttccaagattctatttccagcaagttgcatagctacctgtcctcagccatggttccgaaacgtctcccaacgacgt 44567779  T
Q  124 tatctccaaagagga 138  Q
     ||||||||||||||    
T  44567780 catctccaaagagga 44567794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 24 - 138
Target Start/End: Original strand, 19681156 - 19681270
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||   |||||||||||||||||| |||||||||||  || ||  |||||||||||| ||| |||| |||||||||||||| |||    
T  19681156 aacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgcatacctgcctgccctcagccttggctccgatacgtctcccaacgacgt 19681255  T
Q  124 tatctccaaagagga 138  Q
     ||||||||||||||    
T  19681256 catctccaaagagga 19681270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 9361304 - 9361478
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||| || | ||||  ||||| |||||||||||| ||||   || ||| | ||||||||| ||||| ||| |||||| ||||||| |||    
T  9361304 aacggcgttttccccggtggagtctctcaagactctatccccagccagttacatacctaccggccctcagctatggt-ccgatacgtcccccaacgacgt 9361402  T
Q  124 tatctccaaagaggacttctatga--------tgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| ||  | ||        | |||||||||||||||||||||||||||||  |||||||||||    
T  9361403 catctccaaagaggattttcaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 9361478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 15775288 - 15775329
Alignment:
Q  150 tagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||| ||||||||||||||| ||||||||||||    
T  15775288 tagcacgagccaccacgtgcccaatactctaatgtcttgtct 15775329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 2e-42; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 199
Target Start/End: Complemental strand, 16201583 - 16201407
Alignment:
Q  31 ttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctcc 130  Q
    ||||||||||| | ||||||| |||||||| |||||||||||||  |||||| |||||||||| |||||||||| ||||||||||||||| |||||||||    
T  16201583 ttatccccagtagagtcttccgagattctacccccagcaagttgcatagctacctgccctcagtcatggttccgatacgtctcccaacggtgttatctcc 16201484  T
Q  131 aaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||||| |||        | | || ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16201483 aaagaggatttccaggaatgtgtaatatagcatgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 16201407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 199
Target Start/End: Complemental strand, 20333969 - 20333793
Alignment:
Q  31 ttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctcc 130  Q
    ||||||||||  | ||||||  ||||||||||||||||||||||  |||||| |||||||| |||||||||||| |||||||||||||| ||||||||||    
T  20333969 ttatccccagcagagtcttctgagattctatccccagcaagttgcatagctacctgccctcggccatggttccgatacgtctcccaacgacgttatctcc 20333870  T
Q  131 aaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||||| |||        | | || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20333869 aaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 20333793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 26 - 199
Target Start/End: Complemental strand, 14692474 - 14692293
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | |||| || ||||||||||||||||||||||  |||||| |||| ||||||||||||||||  ||||||||||||| ||| |    
T  14692474 cggcattattcccagtagagtctcccgagattctatccccagcaagttgcatagctacctgctctcagccatggttccgacacgtctcccaacgacgtca 14692375  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||||||| |||        | | || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14692374 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 14692293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 26 - 199
Target Start/End: Complemental strand, 14695156 - 14694975
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | |||| || ||||||||||||||||||||||  |||||| |||| ||||||||||||||||  ||||||||||||| ||| |    
T  14695156 cggcattattcccagtagagtctcccgagattctatccccagcaagttgcatagctacctgctctcagccatggttccgacacgtctcccaacgacgtca 14695057  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||||||| |||        | | || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14695056 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 14694975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 26 - 199
Target Start/End: Complemental strand, 14697840 - 14697659
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | |||| || ||||||||||||||||||||||  |||||| |||| ||||||||||||||||  ||||||||||||| ||| |    
T  14697840 cggcattattcccagtagagtctcccgagattctatccccagcaagttgcatagctacctgctctcagccatggttccgacacgtctcccaacgacgtca 14697741  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||||||| |||        | | || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14697740 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 14697659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 36 - 199
Target Start/End: Complemental strand, 14700511 - 14700340
Alignment:
Q  36 cccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaaga 135  Q
    |||||| | |||| || ||||||||||||||||||||||  |||||| |||| ||||||||||||||||  ||||||||||||| ||| |||||||||||    
T  14700511 cccagtagagtctcccgagattctatccccagcaagttgcatagctacctgctctcagccatggttccgacacgtctcccaacgacgtcatctccaaaga 14700412  T
Q  136 ggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||| |||        | | || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14700411 ggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 14700340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 25 - 199
Target Start/End: Complemental strand, 21891308 - 21891126
Alignment:
Q  25 acggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtt 124  Q
    ||||| |||| |||||| | ||||||| ||||||||||||||||||| ||  |||||| ||||||||||||||||||||| |||||||||||||| |||     
T  21891308 acggcattattcccagtagagtcttccgagattctatccccagcaagatgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtc 21891209  T
Q  125 atctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||||||||||| |||        | | || |||||||||||| |||||||||||||||||| |||||||| |||||||||    
T  21891208 atctccaaagaggatttccaggaatgtgtaatatagcacgagccattacgtgcccaatactccagtgtcttgtatgtctctgc 21891126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 25 - 197
Target Start/End: Original strand, 20467484 - 20467664
Alignment:
Q  25 acggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtt 124  Q
    ||||| ||||||||||  | ||||||| |||||||||||||||||||||   |||||| || |||||||||||||||||| || ||||||||||| ||||    
T  20467484 acggcattatccccagcagagtcttccgagattctatccccagcaagttacatagctacctaccctcagccatggttccgatatgtctcccaacgacgtt 20467583  T
Q  125 atctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctct 197  Q
    |||||||||||||| |||        | | || ||||||||||||||||||| |||||||||||||| |||||||||||||    
T  20467584 atctccaaagaggatttccaggaatgtgtaatatagcacgagccactacgtggccaatactccaatgccttgtctgtctct 20467664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 51644921 - 51645096
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||   |||||||||||||||||| |||||||||||  |||||| ||||||||||||||||||||| |||||||||||||| |||    
T  51644921 aacggcgttttccccagtaaagtcttccaagattctatctccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgt 51645020  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||| ||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  51645021 catcttcaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 51645096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 10951791 - 10951966
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| |||||||| | | ||  |||||||||||| ||||||||||| ||||||| |||||||||||| ||||||||  ||||||||||||| |||    
T  10951791 aacggcgttttccccagtggagcctctcaagattctatctccagcaagttgtttagctacctgccctcagccgtggttccgacacgtctcccaacgacgt 10951890  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  10951891 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 10951966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 26 - 191
Target Start/End: Original strand, 10969344 - 10969517
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||||||||||   ||||  |||||||||||||||||||||| |  || ||| ||||||||||||||||||||| |||||||||||||| ||| |    
T  10969344 cggcattatccccagtaaagtctctcaagattctatccccagcaagtggcatacctacctgccctcagccatggttccgatacgtctcccaacgacgtca 10969443  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||| |||        | | || ||||||||| ||||||||||||||||||| ||||||||||||    
T  10969444 tctccaaagaggatttccaagaatgtgtaatatagcacgagtcactacgtgcccaatactctaatgtcttgtct 10969517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 3647846 - 3648021
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||| || | ||||  ||||| |||||||||||||||||   || ||| ||||||||||||||||||||| |||||||||||||| |||    
T  3647846 aacggcgttttccccggtggagtctctcaagactctatccccagcaagttacatacctacctgccctcagccatggttccgatacgtctcccaacgacgt 3647945  T
Q  124 tatctccaaagagga-cttctatgatg-------tagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     ||||||| |||||| || | |  |||       ||||||||||||||||||||||||||||| ||||||||||||    
T  3647946 catctccatagaggatctccgagaatgtgtaacatagcacgagccactacgtgcccaatactctaatgtcttgtct 3648021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 26 - 191
Target Start/End: Complemental strand, 41786891 - 41786718
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||||||||||   ||||| |||||||||||| |||||||||||  || ||  |||||||||||| |||||||| |||||||||||||| ||| |    
T  41786891 cggcattatccccagtaaagtctttcaagattctatctccagcaagttgcatacctgcctgccctcagccgtggttccgatacgtctcccaacgacgtca 41786792  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||| |||        | | || |||||||||||||||||||||||||||||  | |||||||||    
T  41786791 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgacgtcttgtct 41786718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 28591780 - 28591955
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| |||||||| | ||||  ||||| |||||||| ||||||||   || ||| | |||||| |||||||||||| |||||||||||||| |||    
T  28591780 aacggcgttttccccagtggagtctctcaagactctatccctagcaagttacatacctaccagccctcggccatggttccgatacgtctcccaacgacgt 28591879  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || |||||||||||||||||||||||||| || ||||||||||||    
T  28591880 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatattctaatgtcttgtct 28591955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 45 - 191
Target Start/End: Original strand, 28156425 - 28156579
Alignment:
Q  45 gtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc-- 142  Q
    |||| |||||||||||||||||||||||||  |||||| | ||||||||||  ||| |||  ||||||||||||| ||| |||||||||||||| |||      
T  28156425 gtctcccaagattctatccccagcaagttgcatagctaccggccctcagcctaggtcccgaaacgtctcccaacgacgtcatctccaaagaggatttcca 28156524  T
Q  143 ------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
          | | || |||||||||||||||||||||||||||||  |||||||||||    
T  28156525 agaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 28156579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 25 - 196
Target Start/End: Original strand, 27992 - 28169
Alignment:
Q  25 acggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtt 124  Q
    ||||| ||||||||||  | ||||||| |||||||||||||||||||||   |||||| ||||||||||||||||||||| |||||||||||||| ||||    
T  27992 acggcattatccccagcggagtcttccgagattctatccccagcaagttatatagctacctgccctcagccatggttccgatacgtctcccaacgacgtt 28091  T
Q  125 atctccaaagaggacttctatg-atg-----tagcacgagccactacgtgcccaatactccaatgtcttgtctgtctc 196  Q
    |||||||||||||| ||| | | |||     ||  |||||||||||||||||||||||||||||||||||||||||||    
T  28092 atctccaaagaggatttccaagaatgtgtgatataacgagccactacgtgcccaatactccaatgtcttgtctgtctc 28169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 22 - 199
Target Start/End: Original strand, 467 - 652
Alignment:
Q  22 ataacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggc 121  Q
    |||||||| ||||||||||  | ||||||| ||||||||||||||||| ||||  |||||| ||||||||| ||||||||| | |||||||||||||| |    
T  467 ataacggcattatccccagcagagtcttccgagattctatccccagcaggttgcatagctacctgccctcaaccatggttctgatacgtctcccaacgac 566  T
Q  122 gttatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    ||||||||||||||||| |||        | | || ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  567 gttatctccaaagaggatttccgggaatgtgtaatatagcacgagacactacgtgcccaatactccaatgtcttgtctgtctctgc 652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 45 - 199
Target Start/End: Complemental strand, 26108 - 25946
Alignment:
Q  45 gtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc-- 142  Q
    ||||||| ||||||| |||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||      
T  26108 gtcttccgagattctttccccagcaagttgcttagctacctgccctcagccatggttccgatacgtctcccaacgacgttatctccaaagaggatttcca 26009  T
Q  143 ------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
          | |||| ||||| |||||||||||||||||||| |||||||| |||| |||||||||    
T  26008 agaatgtgtgatatagcatgagccactacgtgcccaatagtccaatgttttgtgtgtctctgc 25946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 45 - 199
Target Start/End: Original strand, 12769 - 12931
Alignment:
Q  45 gtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttcta 144  Q
    ||||||| ||||||||||| || ||||||   |||||| |||||||| ||| |||||||| |||||||||||||| |||||||||||||||||| ||| |    
T  12769 gtcttccgagattctatccgcaacaagtttcatagctacctgccctcggccgtggttccgatacgtctcccaacgacgttatctccaaagaggatttcca 12868  T
Q  145 tg--------atgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
     |        |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12869 gggatgtgtaatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 12931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 2354 - 2529
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||||| || ||||||||| ||||||||||||||||||| |||||||||||  || ||| |||||||||||  ||||||||  ||||||||||||  |||    
T  2354 aacggcattttccccagtcaggtcttccaagattctatctccagcaagttgtatatctacctgccctcagctttggttccgacacgtctcccaacaacgt 2453  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || ||||||||||||||||||||||||| ||| ||||||||||||    
T  2454 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatgctctaatgtcttgtct 2529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 196
Target Start/End: Complemental strand, 24531 - 24353
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | ||||||| ||||||||||||||||||||||  |||||| ||||||||||||||||||||| |||||||||||||| ||| |    
T  24531 cggcattattcccagtagagtcttccgagattctatccccagcaagttgcatagctacctgccctcagccatggttccgatacgtctcccaacgacgtca 24432  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctc 196  Q
    ||||||||||| | |||        | | || |||||||||||| |||||||||||||||||| |||||||||||||||    
T  24431 tctccaaagagaatttccaggaatgtgtaatatagcacgagccattacgtgcccaatactccagtgtcttgtctgtctc 24353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0792 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0792
Description:

Target: scaffold0792; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 199
Target Start/End: Complemental strand, 4173 - 3992
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | |||| || ||||||||||||||||||||||  |||||| ||||||| ||||||||| ||| |||||||||||||| ||| |    
T  4173 cggcattattcccagtagagtctcccgagattctatccccagcaagttgcatagctacctgcccttagccatggtcccgatacgtctcccaacgacgtca 4074  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||||||||||  ||        | | || |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4073 tctccaaagaggatgtccaagaatgtgtaatatagcacgagccactgcgtgcccaatactccaatgtcttgtctgtctctgc 3992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0547 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0547
Description:

Target: scaffold0547; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 31 - 199
Target Start/End: Complemental strand, 9214 - 9037
Alignment:
Q  31 ttatccccagtcgggtcttccaagattctatcccca-gcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctc 129  Q
    |||| |||||| | ||||||| ||||||||||| || ||||||||  | |||| |||||||||||||||||||||  ||||||||||||| ||| |||||    
T  9214 ttattcccagtagagtcttccgagattctatcctcaagcaagttgcatggctacctgccctcagccatggttccgacacgtctcccaacgacgtcatctc 9115  T
Q  130 caaagaggacttctatga--------tgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 199  Q
    |||||||||  || | ||        | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9114 caaagaggatgtccaggaatgtgtaatatagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctgc 9037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 68; Significance: 1e-30; HSPs: 2)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 26 - 198
Target Start/End: Original strand, 33971 - 34151
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | |||| || ||||||||||| ||||||||||  |||||| ||||||||||||||||| ||| |||||||||||||| ||| |    
T  33971 cggcattattcccagtagagtctcccgagattctatcctcagcaagttgcatagctacctgccctcagccatggtcccgatacgtctcccaacgacgtca 34070  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtctgtctctg 198  Q
    ||||||||||||| |||        | | || |||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  34071 tctccaaagaggatttccaggaatgtgtaatatagcacgagccactgcgtgcccaacactccagtgtcttgtctgtctctg 34151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 10615 - 10791
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||||||   |||||||||||||||||  |||||||||||  |||||| ||| |||||||||||||||||  ||||||||||||| |||    
T  10615 aacggcgttttccccagtaaagtcttccaagattctatttccagcaagttgcatagctacctgtcctcagccatggttccgaaacgtctcccaacgacgt 10714  T
Q  124 tatctccaaagaggacttc---------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||         | | || |||||||||||||||||||||||||| || ||||||||||||    
T  10715 catctccaaagaggatttccaagaaatgtgtaatatagcacgagccactacgtgcccaatattctaatgtcttgtct 10791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 21 - 191
Target Start/End: Original strand, 14636 - 14814
Alignment:
Q  21 cataacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacgg 120  Q
    |||||||||||| ||||||||   | ||||| |||||| ||  |||||||||||  |||||| ||||||||||||||||||||| ||||||||||||||     
T  14636 cataacggcgttttccccagtaaagccttccgagattcaatttccagcaagttgtatagctacctgccctcagccatggttccgatacgtctcccaacga 14735  T
Q  121 cgttatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||| |||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  14736 cgtcatctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 14814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 45 - 191
Target Start/End: Complemental strand, 8479 - 8325
Alignment:
Q  45 gtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgttatctccaaagaggacttc-- 142  Q
    |||||||||||||||||| |||||||||||  || ||| |||||||||||| |||||| | |||||||||||||| ||| |||||||||||||| |||      
T  8479 gtcttccaagattctatctccagcaagttgcatacctacctgccctcagccttggttctgatacgtctcccaacgacgtcatctccaaagaggatttcca 8380  T
Q  143 ------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
          | | || |||||||||||||||||||||||||||||  |||||||||||    
T  8379 agaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 8325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 59; Significance: 3e-25; HSPs: 2)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 2736 - 2561
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| |||||||| | | ||  |||||||||||| |||||||||||  || ||| ||||||||||| |||||||||  ||||||||||||| |||    
T  2736 aacggcgttttccccagtggagcctctcaagattctatctccagcaagttgcatatctacctgccctcagctatggttccgacacgtctcccaacgacgt 2637  T
Q  124 tatctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
     |||||||||||||| |||        | | || |||||||||||||||||||||||||||||  |||||||||||    
T  2636 catctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctgatgtcttgtct 2561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 18505 - 18582
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggtt 101  Q
    ||||||||| |||||||| | | ||  |||||||||||| |||||||||||  || ||| ||||||||||| ||||||    
T  18505 aacggcgttttccccagtggagcctctcaagattctatctccagcaagttgcatatctacctgccctcagctatggtt 18582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 26 - 138
Target Start/End: Complemental strand, 40181 - 40067
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttg-attagctatctgccc-tcagccatggttccggtacgtctcccaacggcgt 123  Q
    |||| |||| |||||| | ||||||| |||||||||||||||||||||| |||| ||| |||||| ||||||||||||||| |||||||||||||| |||    
T  40181 cggcattattcccagtagagtcttccgagattctatccccagcaagttgcattaactacctgcccctcagccatggttccgatacgtctcccaacgacgt 40082  T
Q  124 tatctccaaagagga 138  Q
     ||||||||||||||    
T  40081 catctccaaagagga 40067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 26 - 191
Target Start/End: Original strand, 12715 - 12888
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgtta 125  Q
    |||| |||| |||||| | |||| |||||| ||||||||||||||||||  |||||| | ||||||||||  ||| |||  ||||||||||||| ||| |    
T  12715 cggcattattcccagtagagtctcccaagactctatccccagcaagttgcatagctaccggccctcagcctaggtcccgacacgtctcccaacgacgtca 12814  T
Q  126 tctccaaagaggacttc--------tatgatgtagcacgagccactacgtgcccaatactccaatgtcttgtct 191  Q
    ||||||||||||| |||        | | || ||||||||||||||||||||||||||||| ||||||||||||    
T  12815 tctccaaagaggatttccaagaatgtgtaatatagcacgagccactacgtgcccaatactctaatgtcttgtct 12888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 138
Target Start/End: Original strand, 16273 - 16387
Alignment:
Q  24 aacggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctcagccatggttccggtacgtctcccaacggcgt 123  Q
    ||||||||| ||||| || | ||||  ||||| |||||||||||| ||||   || ||| | |||||| |||||||||||| |||||||||||||| |||    
T  16273 aacggcgttttccccggtggagtctctcaagactctatccccagccagttacatacctaccggccctcggccatggttccgatacgtctcccaacgacgt 16372  T
Q  124 tatctccaaagagga 138  Q
     ||||||||||||||    
T  16373 catctccaaagagga 16387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 6741 - 6807
Alignment:
Q  26 cggcgttatccccagtcgggtcttccaagattctatccccagcaagttgattagctatctgccctca 92  Q
    |||| |||| |||||| | ||||||| ||||||||||||||||||||||  |||||| |||||||||    
T  6741 cggcattattcccagtagagtcttccgagattctatccccagcaagttgcatagctacctgccctca 6807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University